Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
16:20:07 (1344861): wrapper (7.7.26015): starting
16:20:07 (1344861): wrapper: running run_atlas (--nthreads 12)
[2026-02-10 16:20:07] Arguments: --nthreads 12
[2026-02-10 16:20:07] Threads: 12
[2026-02-10 16:20:07] Checking for CVMFS
[2026-02-10 16:20:07] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-10 16:20:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-10 16:20:08] Running cvmfs_config stat atlas.cern.ch
[2026-02-10 16:20:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-10 16:20:08] 2.13.3.0 1143127 278 49396 156088 1 50 3791718 4096001 922 130560 0 599510 100.000 1378 117 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 1
[2026-02-10 16:20:08] CVMFS is ok
[2026-02-10 16:20:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-10 16:20:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-10 16:20:08] Small home clusters do not require a local http proxy but it is suggested if
[2026-02-10 16:20:08] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-02-10 16:20:08] Further information can be found at the LHC@home message board.
[2026-02-10 16:20:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-10 16:20:08] Checking for apptainer binary...
[2026-02-10 16:20:08] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-10 16:20:08] Running /usr/bin/apptainer --version
[2026-02-10 16:20:08] apptainer version 1.4.5
[2026-02-10 16:20:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-10 16:20:08] test-run
[2026-02-10 16:20:08] apptainer works
[2026-02-10 16:20:08] Set ATHENA_PROC_NUMBER=12
[2026-02-10 16:20:08] Set ATHENA_CORE_NUMBER=12
[2026-02-10 16:20:08] Starting ATLAS job with PandaID=6996649904
[2026-02-10 16:20:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-10 16:53:28]  *** The last 200 lines of the pilot log: ***
[2026-02-10 16:53:28]  is_tar=False
[2026-02-10 16:53:28]  lfn=log.48317892._009759.job.log.tgz.1
[2026-02-10 16:53:28]  mtime=0
[2026-02-10 16:53:28]  protocol_id=None
[2026-02-10 16:53:28]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-10 16:53:28]  replicas=None
[2026-02-10 16:53:28]  scope=mc23_13p6TeV
[2026-02-10 16:53:28]  status=None
[2026-02-10 16:53:28]  status_code=0
[2026-02-10 16:53:28]  storage_token=
[2026-02-10 16:53:28]  surl=/var/lib/boinc-client/slots/1/PanDA_Pilot-6996649904/log.48317892._009759.job.log.tgz.1
[2026-02-10 16:53:28]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a4/f4/log.48317892._009759.job.log.tgz.1
[2026-02-10 16:53:28]  workdir=None
[2026-02-10 16:53:28] ]
[2026-02-10 16:53:28] 2026-02-10 16:52:31,046 | INFO     | transferring file log.48317892._009759.job.log.tgz.1 from /var/lib/boinc-client/slots/1/PanDA_Pilot-6996649904/log.48317892._009759.job.log.tgz.1 to /var/lib/boinc
[2026-02-10 16:53:28] 2026-02-10 16:52:31,046 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/1/PanDA_Pilot-6996649904/log.48317892._009759.job.log.tgz.1 /var/lib/boinc-client/slots/1/log.483178
[2026-02-10 16:53:28] 2026-02-10 16:52:31,058 | INFO     | adding to output.list: log.48317892._009759.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a4/f4/log.48317892._009759.job.log.tg
[2026-02-10 16:53:28] 2026-02-10 16:52:31,058 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-10 16:53:28] 2026-02-10 16:52:31,058 | INFO     | summary of transferred files:
[2026-02-10 16:53:28] 2026-02-10 16:52:31,058 | INFO     |  -- lfn=log.48317892._009759.job.log.tgz.1, status_code=0, status=transferred
[2026-02-10 16:53:28] 2026-02-10 16:52:31,058 | INFO     | stage-out finished correctly
[2026-02-10 16:53:28] 2026-02-10 16:52:32,236 | INFO     | monitor loop #152: job 0:6996649904 is in state 'finished'
[2026-02-10 16:53:28] 2026-02-10 16:52:32,236 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-10 16:53:28] 2026-02-10 16:52:32,402 | INFO     | time since job start (1932s) is within the limit (349056.0s)
[2026-02-10 16:53:28] 2026-02-10 16:52:34,091 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-10 16:53:28] 2026-02-10 16:52:34,408 | INFO     | time since job start (1934s) is within the limit (349056.0s)
[2026-02-10 16:53:28] 2026-02-10 16:52:34,739 | INFO     | monitor loop #153: job 0:6996649904 is in state 'finished'
[2026-02-10 16:53:28] 2026-02-10 16:52:34,739 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-10 16:53:28] 2026-02-10 16:52:36,413 | INFO     | time since job start (1936s) is within the limit (349056.0s)
[2026-02-10 16:53:28] 2026-02-10 16:52:36,949 | INFO     | job 6996649904 has state=finished
[2026-02-10 16:53:28] 2026-02-10 16:52:36,949 | INFO     | preparing for final server update for job 6996649904 in state='finished'
[2026-02-10 16:53:28] 2026-02-10 16:52:36,949 | INFO     | reading metadata from: /var/lib/boinc-client/slots/1/PanDA_Pilot-6996649904/jobReport.json
[2026-02-10 16:53:28] 2026-02-10 16:52:36,950 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/1/workernode_map.json
[2026-02-10 16:53:28] 2026-02-10 16:52:36,950 | INFO     | this job has now completed (state=finished)
[2026-02-10 16:53:28] 2026-02-10 16:52:36,950 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-10 16:53:28] 2026-02-10 16:52:36,950 | INFO     | log transfer has been attempted: DONE
[2026-02-10 16:53:28] 2026-02-10 16:52:36,951 | INFO     | job 6996649904 has finished - writing final server update
[2026-02-10 16:53:28] 2026-02-10 16:52:36,951 | INFO     | total number of processed events: 400 (read)
[2026-02-10 16:53:28] 2026-02-10 16:52:36,952 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6996649904/memory_monitor_summary.json (trf name=prmon)
[2026-02-10 16:53:28] 2026-02-10 16:52:36,952 | INFO     | extracted standard info from prmon json
[2026-02-10 16:53:28] 2026-02-10 16:52:36,952 | INFO     | extracted standard memory fields from prmon json
[2026-02-10 16:53:28] 2026-02-10 16:52:36,952 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-10 16:53:28] 2026-02-10 16:52:36,952 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-10 16:53:28] 2026-02-10 16:52:36,952 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-10 16:53:28] 2026-02-10 16:52:36,952 | INFO     | fitting pss+swap vs Time
[2026-02-10 16:53:28] 2026-02-10 16:52:36,952 | INFO     | sum of square deviations: 4837300.0
[2026-02-10 16:53:28] 2026-02-10 16:52:36,952 | INFO     | sum of deviations: 1499604724.0
[2026-02-10 16:53:28] 2026-02-10 16:52:36,952 | INFO     | mean x: 1770741472.0
[2026-02-10 16:53:28] 2026-02-10 16:52:36,952 | INFO     | mean y: 2680838.56
[2026-02-10 16:53:28] 2026-02-10 16:52:36,952 | INFO     | intersect: -548942448963.99805
[2026-02-10 16:53:28] 2026-02-10 16:52:36,952 | INFO     | chi2: 0.3196041046302581
[2026-02-10 16:53:28] 2026-02-10 16:52:36,952 | INFO     | current memory leak: 310.01 B/s (using 25 data points, chi2=0.32)
[2026-02-10 16:53:28] 2026-02-10 16:52:36,952 | INFO     | could have reported an average CPU frequency of 4291 MHz (5 samples)
[2026-02-10 16:53:28] 2026-02-10 16:52:36,953 | INFO     | ..............................
[2026-02-10 16:53:28] 2026-02-10 16:52:36,953 | INFO     | . Timing measurements:
[2026-02-10 16:53:28] 2026-02-10 16:52:36,953 | INFO     | . get job = 0 s
[2026-02-10 16:53:28] 2026-02-10 16:52:36,953 | INFO     | . initial setup = 4 s
[2026-02-10 16:53:28] 2026-02-10 16:52:36,953 | INFO     | . payload setup = 1 s
[2026-02-10 16:53:28] 2026-02-10 16:52:36,953 | INFO     | . stage-in = 0 s
[2026-02-10 16:53:28] 2026-02-10 16:52:36,953 | INFO     | . payload execution = 1914 s
[2026-02-10 16:53:28] 2026-02-10 16:52:36,953 | INFO     | . stage-out = 0 s
[2026-02-10 16:53:28] 2026-02-10 16:52:36,953 | INFO     | . log creation = 0 s
[2026-02-10 16:53:28] 2026-02-10 16:52:36,953 | INFO     | ..............................
[2026-02-10 16:53:28] 2026-02-10 16:52:36,973 | INFO     | 
[2026-02-10 16:53:28] 2026-02-10 16:52:36,973 | INFO     | job summary report
[2026-02-10 16:53:28] 2026-02-10 16:52:36,973 | INFO     | --------------------------------------------------
[2026-02-10 16:53:28] 2026-02-10 16:52:36,973 | INFO     | PanDA job id: 6996649904
[2026-02-10 16:53:28] 2026-02-10 16:52:36,973 | INFO     | task id: 48317892
[2026-02-10 16:53:28] 2026-02-10 16:52:36,973 | INFO     | errors: (none)
[2026-02-10 16:53:28] 2026-02-10 16:52:36,973 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-10 16:53:28] 2026-02-10 16:52:36,973 | INFO     | pilot state: finished 
[2026-02-10 16:53:28] 2026-02-10 16:52:36,973 | INFO     | transexitcode: 0
[2026-02-10 16:53:28] 2026-02-10 16:52:36,973 | INFO     | exeerrorcode: 0
[2026-02-10 16:53:28] 2026-02-10 16:52:36,973 | INFO     | exeerrordiag: 
[2026-02-10 16:53:28] 2026-02-10 16:52:36,973 | INFO     | exitcode: 0
[2026-02-10 16:53:28] 2026-02-10 16:52:36,973 | INFO     | exitmsg: OK
[2026-02-10 16:53:28] 2026-02-10 16:52:36,973 | INFO     | cpuconsumptiontime: 17392 s
[2026-02-10 16:53:28] 2026-02-10 16:52:36,973 | INFO     | nevents: 400
[2026-02-10 16:53:28] 2026-02-10 16:52:36,973 | INFO     | neventsw: 0
[2026-02-10 16:53:28] 2026-02-10 16:52:36,973 | INFO     | pid: 1353618
[2026-02-10 16:53:28] 2026-02-10 16:52:36,973 | INFO     | pgrp: 1353618
[2026-02-10 16:53:28] 2026-02-10 16:52:36,973 | INFO     | corecount: 12
[2026-02-10 16:53:28] 2026-02-10 16:52:36,973 | INFO     | event service: False
[2026-02-10 16:53:28] 2026-02-10 16:52:36,973 | INFO     | sizes: {0: 2282174, 10: 2282174, 1920: 2307137, 1921: 2316149, 1924: 2316205, 1926: 2316431}
[2026-02-10 16:53:28] 2026-02-10 16:52:36,973 | INFO     | --------------------------------------------------
[2026-02-10 16:53:28] 2026-02-10 16:52:36,973 | INFO     | 
[2026-02-10 16:53:28] 2026-02-10 16:52:36,973 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2026-02-10 16:53:28] 2026-02-10 16:52:37,005 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-10 16:53:28] 2026-02-10 16:52:37,005 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-10 16:53:28] 2026-02-10 16:52:37,005 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-10 16:53:28] 2026-02-10 16:52:37,005 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-10 16:53:28] 2026-02-10 16:52:37,005 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-10 16:53:28] 2026-02-10 16:52:37,005 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-10 16:53:28] 2026-02-10 16:52:37,005 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-10 16:53:28] 2026-02-10 16:52:37,005 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-10 16:53:28] 2026-02-10 16:52:37,005 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-10 16:53:28] 2026-02-10 16:52:37,005 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-10 16:53:28] 2026-02-10 16:52:37,005 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-10 16:53:28] 2026-02-10 16:52:37,005 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-10 16:53:28] 2026-02-10 16:52:37,005 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-10 16:53:28] 2026-02-10 16:52:37,005 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-10 16:53:28] 2026-02-10 16:52:37,005 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-10 16:53:28] 2026-02-10 16:52:37,005 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-10 16:53:28] 2026-02-10 16:52:37,005 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-10 16:53:28] 2026-02-10 16:52:37,005 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-10 16:53:28] 2026-02-10 16:52:37,005 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-10 16:53:28] 2026-02-10 16:52:37,005 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-10 16:53:28] 2026-02-10 16:52:37,005 | INFO     | job 6996649904 has completed (purged errors)
[2026-02-10 16:53:28] 2026-02-10 16:52:37,005 | INFO     | overall cleanup function is called
[2026-02-10 16:53:28] 2026-02-10 16:52:38,012 | INFO     | --- collectZombieJob: --- 10, [1353618]
[2026-02-10 16:53:28] 2026-02-10 16:52:38,012 | INFO     | zombie collector waiting for pid 1353618
[2026-02-10 16:53:28] 2026-02-10 16:52:38,012 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-10 16:53:28] 2026-02-10 16:52:38,012 | INFO     | collected zombie processes
[2026-02-10 16:53:28] 2026-02-10 16:52:38,012 | INFO     | will attempt to kill all subprocesses of pid=1353618
[2026-02-10 16:53:28] 2026-02-10 16:52:38,045 | INFO     | process IDs to be killed: [1353618] (in reverse order)
[2026-02-10 16:53:28] 2026-02-10 16:52:38,084 | WARNING  | found no corresponding commands to process id(s)
[2026-02-10 16:53:28] 2026-02-10 16:52:38,084 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-10 16:53:28] 2026-02-10 16:52:38,085 | INFO     | did not find any defunct processes belonging to 1353618
[2026-02-10 16:53:28] 2026-02-10 16:52:38,086 | INFO     | did not find any defunct processes belonging to 1353618
[2026-02-10 16:53:28] 2026-02-10 16:52:38,086 | INFO     | ready for new job
[2026-02-10 16:53:28] 2026-02-10 16:52:38,086 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-10 16:53:28] 2026-02-10 16:52:38,087 | INFO     | **************************************
[2026-02-10 16:53:28] 2026-02-10 16:52:38,087 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-10 16:53:28] 2026-02-10 16:52:38,087 | INFO     | **************************************
[2026-02-10 16:53:28] 2026-02-10 16:52:38,087 | INFO     | 
[2026-02-10 16:53:28] 2026-02-10 16:52:38,087 | INFO     | pilot is running in a VM
[2026-02-10 16:53:28] 2026-02-10 16:52:38,088 | INFO     | architecture information:
[2026-02-10 16:53:28] 2026-02-10 16:52:38,088 | INFO     | executing command: cat /etc/os-release
[2026-02-10 16:53:28] 2026-02-10 16:52:38,099 | INFO     | cat /etc/os-release:
[2026-02-10 16:53:28] NAME="CentOS Linux"
[2026-02-10 16:53:28] VERSION="7 (Core)"
[2026-02-10 16:53:28] ID="centos"
[2026-02-10 16:53:28] ID_LIKE="rhel fedora"
[2026-02-10 16:53:28] VERSION_ID="7"
[2026-02-10 16:53:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-10 16:53:28] ANSI_COLOR="0;31"
[2026-02-10 16:53:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-10 16:53:28] HOME_URL="https://www.centos.org/"
[2026-02-10 16:53:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-10 16:53:28] 
[2026-02-10 16:53:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-10 16:53:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-10 16:53:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-10 16:53:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-10 16:53:28] 
[2026-02-10 16:53:28] 2026-02-10 16:52:38,099 | INFO     | **************************************
[2026-02-10 16:53:28] 2026-02-10 16:52:38,602 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2026-02-10 16:53:28] 2026-02-10 16:52:38,613 | INFO     | sufficient remaining disk space (56769904640 B)
[2026-02-10 16:53:28] 2026-02-10 16:52:38,613 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-10 16:53:28] 2026-02-10 16:52:38,613 | INFO     | current server update state: UPDATING_FINAL
[2026-02-10 16:53:28] 2026-02-10 16:52:38,613 | INFO     | update_server=False
[2026-02-10 16:53:28] 2026-02-10 16:52:38,613 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-10 16:53:28] 2026-02-10 16:52:38,613 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-10 16:53:28] 2026-02-10 16:52:38,613 | INFO     | aborting loop
[2026-02-10 16:53:28] 2026-02-10 16:52:38,614 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-10 16:53:28] 2026-02-10 16:52:38,999 | INFO     | all job control threads have been joined
[2026-02-10 16:53:28] 2026-02-10 16:52:39,095 | INFO     | all data control threads have been joined
[2026-02-10 16:53:28] 2026-02-10 16:52:39,119 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-10 16:53:28] 2026-02-10 16:52:39,233 | INFO     | all payload control threads have been joined
[2026-02-10 16:53:28] 2026-02-10 16:52:39,618 | INFO     | [job] job monitor thread has finished
[2026-02-10 16:53:28] 2026-02-10 16:52:39,618 | INFO     | [job] queue monitor thread has finished
[2026-02-10 16:53:28] 2026-02-10 16:52:39,619 | INFO     | [job] retrieve thread has finished
[2026-02-10 16:53:28] 2026-02-10 16:52:39,694 | INFO     | [payload] validate_post thread has finished
[2026-02-10 16:53:28] 2026-02-10 16:52:40,005 | INFO     | [job] control thread has finished
[2026-02-10 16:53:28] 2026-02-10 16:52:40,100 | INFO     | [data] control thread has finished
[2026-02-10 16:53:28] 2026-02-10 16:52:40,137 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-10 16:53:28] 2026-02-10 16:52:40,238 | INFO     | [payload] control thread has finished
[2026-02-10 16:53:28] 2026-02-10 16:52:40,563 | INFO     | [payload] failed_post thread has finished
[2026-02-10 16:53:28] 2026-02-10 16:52:40,660 | INFO     | [payload] execute_payloads thread has finished
[2026-02-10 16:53:28] 2026-02-10 16:52:40,758 | INFO     | [job] validate thread has finished
[2026-02-10 16:53:28] 2026-02-10 16:52:40,880 | INFO     | [job] create_data_payload thread has finished
[2026-02-10 16:53:28] 2026-02-10 16:52:41,038 | INFO     | [payload] validate_pre thread has finished
[2026-02-10 16:53:28] 2026-02-10 16:52:41,084 | INFO     | [data] copytool_in thread has finished
[2026-02-10 16:53:28] 2026-02-10 16:52:41,125 | INFO     | [data] copytool_out thread has finished
[2026-02-10 16:53:28] 2026-02-10 16:52:44,145 | INFO     | [data] queue_monitor thread has finished
[2026-02-10 16:53:28] 2026-02-10 16:52:49,508 | INFO     | job.realtimelogging is not enabled
[2026-02-10 16:53:28] 2026-02-10 16:52:50,513 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-10 16:53:28] 2026-02-10 16:53:09,534 | INFO     | PID=1349053 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-10 16:53:28] 2026-02-10 16:53:09,535 | INFO     | .. there are 2 such processes running
[2026-02-10 16:53:28] 2026-02-10 16:53:09,535 | INFO     | found 0 job(s) in 20 queues
[2026-02-10 16:53:28] 2026-02-10 16:53:09,535 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-10 16:53:28] 2026-02-10 16:53:09,535 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-10 16:53:28] 2026-02-10 16:53:22,723 | INFO     | [monitor] cgroup control has ended
[2026-02-10 16:53:28] 2026-02-10 16:53:23,486 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140641090377536)>', '<ExcThread(monitor, started 140640734123776)>']
[2026-02-10 16:53:28] 2026-02-10 16:53:23,603 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-10 16:53:28] 2026-02-10 16:53:23,603 | INFO     | [monitor] control thread has ended
[2026-02-10 16:53:28] 2026-02-10 16:53:28,512 | INFO     | all workflow threads have been joined
[2026-02-10 16:53:28] 2026-02-10 16:53:28,512 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-10 16:53:28] 2026-02-10 16:53:28,512 | INFO     | traces error code: 0
[2026-02-10 16:53:28] 2026-02-10 16:53:28,512 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-10 16:53:28] 2026-02-10 16:53:28,576 [wrapper] ==== pilot stdout END ====
[2026-02-10 16:53:28] 2026-02-10 16:53:28,578 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-10 16:53:28] 2026-02-10 16:53:28,579 [wrapper] pilotpid: 1349053
[2026-02-10 16:53:28] 2026-02-10 16:53:28,580 [wrapper] Pilot exit status: 0
[2026-02-10 16:53:28] 2026-02-10 16:53:28,588 [wrapper] pandaids: 6996649904
[2026-02-10 16:53:28] 2026-02-10 16:53:28,603 [wrapper] cleanup supervisor_pilot 1371468 1349054
[2026-02-10 16:53:28] 2026-02-10 16:53:28,604 [wrapper] Test setup, not cleaning
[2026-02-10 16:53:28] 2026-02-10 16:53:28,606 [wrapper] apfmon messages muted
[2026-02-10 16:53:28] 2026-02-10 16:53:28,607 [wrapper] ==== wrapper stdout END ====
[2026-02-10 16:53:28] 2026-02-10 16:53:28,608 [wrapper] ==== wrapper stderr END ====
[2026-02-10 16:53:28]  *** Error codes and diagnostics ***
[2026-02-10 16:53:28]     "exeErrorCode": 0,
[2026-02-10 16:53:28]     "exeErrorDiag": "",
[2026-02-10 16:53:28]     "pilotErrorCode": 0,
[2026-02-10 16:53:28]     "pilotErrorDiag": "",
[2026-02-10 16:53:28]  *** Listing of results directory ***
[2026-02-10 16:53:28] total 675160
[2026-02-10 16:53:28] -rw-r--r-- 1 boinc boinc    584422 Feb  2 10:55 pilot3.tar.gz
[2026-02-10 16:53:28] -rwx------ 1 boinc boinc     36322 Feb  2 10:58 runpilot2-wrapper.sh
[2026-02-10 16:53:28] -rw-r--r-- 1 boinc boinc      5111 Feb  2 11:00 queuedata.json
[2026-02-10 16:53:28] -rw-r--r-- 1 boinc boinc       100 Feb 10 16:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-10 16:53:28] -rwxr-xr-x 1 boinc boinc      7986 Feb 10 16:20 run_atlas
[2026-02-10 16:53:28] -rw-r--r-- 1 boinc boinc       105 Feb 10 16:20 job.xml
[2026-02-10 16:53:28] -rw-r--r-- 2 boinc boinc     15845 Feb 10 16:20 start_atlas.sh
[2026-02-10 16:53:28] drwxrwx--x 2 boinc boinc      4096 Feb 10 16:20 shared
[2026-02-10 16:53:28] -rw-r--r-- 2 boinc boinc    597758 Feb 10 16:20 input.tar.gz
[2026-02-10 16:53:28] -rw-r--r-- 1 boinc boinc      7992 Feb 10 16:20 init_data.xml
[2026-02-10 16:53:28] -rw-r--r-- 2 boinc boinc 498337290 Feb 10 16:20 EVNT.48317889._000187.pool.root.1
[2026-02-10 16:53:28] -rw-r--r-- 1 boinc boinc         0 Feb 10 16:20 boinc_lockfile
[2026-02-10 16:53:28] -rw-r--r-- 1 boinc boinc      2522 Feb 10 16:20 pandaJob.out
[2026-02-10 16:53:28] -rw------- 1 boinc boinc   1009534 Feb 10 16:20 agis_schedconf.cvmfs.json
[2026-02-10 16:53:28] -rw------- 1 boinc boinc   1512955 Feb 10 16:20 agis_ddmendpoints.agis.ALL.json
[2026-02-10 16:53:28] -rw------- 1 boinc boinc       420 Feb 10 16:20 workernode_map.json
[2026-02-10 16:53:28] drwx------ 5 boinc boinc      4096 Feb 10 16:20 pilot3
[2026-02-10 16:53:28] -rw------- 1 boinc boinc 187668604 Feb 10 16:52 HITS.48317892._009759.pool.root.1
[2026-02-10 16:53:28] -rw-r--r-- 1 boinc boinc       530 Feb 10 16:52 boinc_task_state.xml
[2026-02-10 16:53:28] -rw------- 1 boinc boinc        95 Feb 10 16:52 pilot_heartbeat.json
[2026-02-10 16:53:28] -rw------- 1 boinc boinc      1025 Feb 10 16:52 memory_monitor_summary.json
[2026-02-10 16:53:28] -rw------- 1 boinc boinc    379439 Feb 10 16:52 log.48317892._009759.job.log.tgz.1
[2026-02-10 16:53:28] -rw------- 1 boinc boinc      6285 Feb 10 16:52 heartbeat.json
[2026-02-10 16:53:28] -rw-r--r-- 1 boinc boinc        27 Feb 10 16:53 wrapper_checkpoint.txt
[2026-02-10 16:53:28] -rw-r--r-- 1 boinc boinc      8192 Feb 10 16:53 boinc_mmap_file
[2026-02-10 16:53:28] -rw------- 1 boinc boinc      4960 Feb 10 16:53 pilotlog.txt
[2026-02-10 16:53:28] -rw------- 1 boinc boinc    325603 Feb 10 16:53 log.48317892._009759.job.log.1
[2026-02-10 16:53:28] -rw------- 1 boinc boinc       357 Feb 10 16:53 output.list
[2026-02-10 16:53:28] -rw-r--r-- 1 boinc boinc       620 Feb 10 16:53 runtime_log
[2026-02-10 16:53:28] -rw------- 1 boinc boinc    727040 Feb 10 16:53 result.tar.gz
[2026-02-10 16:53:28] -rw-r--r-- 1 boinc boinc      8889 Feb 10 16:53 runtime_log.err
[2026-02-10 16:53:28] -rw------- 1 boinc boinc       643 Feb 10 16:53 FT3MDmuo668n9Rq4apOajLDm4fhM0noT9bVooX4SDmLHSKDmEjJ2Fn.diag
[2026-02-10 16:53:28] -rw-r--r-- 1 boinc boinc     21716 Feb 10 16:53 stderr.txt
[2026-02-10 16:53:28] HITS file was successfully produced:
[2026-02-10 16:53:28] -rw------- 1 boinc boinc 187668604 Feb 10 16:52 shared/HITS.pool.root.1
[2026-02-10 16:53:28]  *** Contents of shared directory: ***
[2026-02-10 16:53:28] total 671252
[2026-02-10 16:53:28] -rw-r--r-- 2 boinc boinc     15845 Feb 10 16:20 start_atlas.sh
[2026-02-10 16:53:28] -rw-r--r-- 2 boinc boinc    597758 Feb 10 16:20 input.tar.gz
[2026-02-10 16:53:28] -rw-r--r-- 2 boinc boinc 498337290 Feb 10 16:20 ATLAS.root_0
[2026-02-10 16:53:28] -rw------- 1 boinc boinc 187668604 Feb 10 16:52 HITS.pool.root.1
[2026-02-10 16:53:28] -rw------- 1 boinc boinc    727040 Feb 10 16:53 result.tar.gz
16:53:30 (1344861): run_atlas exited; CPU time 17390.414360
16:53:30 (1344861): called boinc_finish(0)

</stderr_txt>
]]>

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