Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:04:31 (1652520): wrapper (7.7.26015): starting
07:04:31 (1652520): wrapper: running run_atlas (--nthreads 9)
[2026-02-10 07:04:31] Arguments: --nthreads 9
[2026-02-10 07:04:31] Threads: 9
[2026-02-10 07:04:31] Checking for CVMFS
[2026-02-10 07:04:31] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-10 07:04:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-10 07:04:32] Running cvmfs_config stat atlas.cern.ch
[2026-02-10 07:04:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-10 07:04:33] 2.13.3.0 2282030 8124 178088 156085 3 384 31094932 32935937 16861 16776704 0 14503369 99.627 12969323 33118 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-02-10 07:04:33] CVMFS is ok
[2026-02-10 07:04:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-10 07:04:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-10 07:04:33] Further information can be found at the LHC@home message board.
[2026-02-10 07:04:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-10 07:04:33] Checking for apptainer binary...
[2026-02-10 07:04:33] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-10 07:04:33] Running /usr/bin/apptainer --version
[2026-02-10 07:04:33] apptainer version 1.4.5-2.el9
[2026-02-10 07:04:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-10 07:04:33] c6-12-27-1.aglt2.org
[2026-02-10 07:04:33] apptainer works
[2026-02-10 07:04:34] Set ATHENA_PROC_NUMBER=9
[2026-02-10 07:04:34] Set ATHENA_CORE_NUMBER=9
[2026-02-10 07:04:34] Starting ATLAS job with PandaID=6996650978
[2026-02-10 07:04:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-10 11:44:44]  *** The last 200 lines of the pilot log: ***
[2026-02-10 11:44:44] 2026-02-10 16:43:31,208 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-10 11:44:44] 2026-02-10 16:43:32,874 | INFO     | job 6996650978 has state=finished
[2026-02-10 11:44:44] 2026-02-10 16:43:32,874 | INFO     | preparing for final server update for job 6996650978 in state='finished'
[2026-02-10 11:44:44] 2026-02-10 16:43:32,875 | INFO     | reading metadata from: /tmp/boinchome/slots/3/PanDA_Pilot-6996650978/jobReport.json
[2026-02-10 11:44:44] 2026-02-10 16:43:32,877 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/3/workernode_map.json
[2026-02-10 11:44:44] 2026-02-10 16:43:32,877 | INFO     | this job has now completed (state=finished)
[2026-02-10 11:44:44] 2026-02-10 16:43:32,877 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-10 11:44:44] 2026-02-10 16:43:32,877 | INFO     | log transfer has been attempted: DONE
[2026-02-10 11:44:44] 2026-02-10 16:43:32,877 | INFO     | job 6996650978 has finished - writing final server update
[2026-02-10 11:44:44] 2026-02-10 16:43:32,878 | INFO     | total number of processed events: 400 (read)
[2026-02-10 11:44:44] 2026-02-10 16:43:32,953 | INFO     | time since job start (16645s) is within the limit (349056.0s)
[2026-02-10 11:44:44] 2026-02-10 16:43:32,997 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6996650978/memory_monitor_summary.json (trf name=prmon)
[2026-02-10 11:44:44] 2026-02-10 16:43:32,998 | INFO     | extracted standard info from prmon json
[2026-02-10 11:44:44] 2026-02-10 16:43:32,998 | INFO     | extracted standard memory fields from prmon json
[2026-02-10 11:44:44] 2026-02-10 16:43:32,998 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-10 11:44:44] 2026-02-10 16:43:32,999 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-10 11:44:44] 2026-02-10 16:43:32,999 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-10 11:44:44] 2026-02-10 16:43:33,022 | INFO     | fitting pss+swap vs Time
[2026-02-10 11:44:44] 2026-02-10 16:43:33,022 | INFO     | sum of square deviations: 6240018310.908117
[2026-02-10 11:44:44] 2026-02-10 16:43:33,042 | INFO     | sum of deviations: 92831403304.90813
[2026-02-10 11:44:44] 2026-02-10 16:43:33,043 | INFO     | mean x: 1770733521.0183823
[2026-02-10 11:44:44] 2026-02-10 16:43:33,043 | INFO     | mean y: 2573412.018382353
[2026-02-10 11:44:44] 2026-02-10 16:43:33,043 | INFO     | intersect: -26340246343.466454
[2026-02-10 11:44:44] 2026-02-10 16:43:33,043 | INFO     | chi2: 3.6462248480321984
[2026-02-10 11:44:44] 2026-02-10 16:43:33,044 | INFO     | sum of square deviations: 5902231724.539354
[2026-02-10 11:44:44] 2026-02-10 16:43:33,064 | INFO     | sum of deviations: 110712024062.23593
[2026-02-10 11:44:44] 2026-02-10 16:43:33,064 | INFO     | mean x: 1770733368.52809
[2026-02-10 11:44:44] 2026-02-10 16:43:33,064 | INFO     | mean y: 2581365.8352059927
[2026-02-10 11:44:44] 2026-02-10 16:43:33,064 | INFO     | intersect: -33212223550.958576
[2026-02-10 11:44:44] 2026-02-10 16:43:33,065 | INFO     | chi2: 2.9433748534613065
[2026-02-10 11:44:44] 2026-02-10 16:43:33,065 | INFO     | current chi2=2.9433748534613065 (change=19.276101279113583 %)
[2026-02-10 11:44:44] 2026-02-10 16:43:33,065 | INFO     | right removable region: 266
[2026-02-10 11:44:44] 2026-02-10 16:43:33,065 | INFO     | sum of square deviations: 5902162184.591727
[2026-02-10 11:44:44] 2026-02-10 16:43:33,085 | INFO     | sum of deviations: 21963282852.883873
[2026-02-10 11:44:44] 2026-02-10 16:43:33,085 | INFO     | mean x: 1770733673.5243447
[2026-02-10 11:44:44] 2026-02-10 16:43:33,086 | INFO     | mean y: 2605283.479400749
[2026-02-10 11:44:44] 2026-02-10 16:43:33,086 | INFO     | intersect: -6586695944.174265
[2026-02-10 11:44:44] 2026-02-10 16:43:33,086 | INFO     | chi2: 1.10379914235618
[2026-02-10 11:44:44] 2026-02-10 16:43:33,086 | INFO     | current chi2=1.10379914235618 (change=69.72761723808996 %)
[2026-02-10 11:44:44] 2026-02-10 16:43:33,087 | INFO     | sum of square deviations: 5576725017.755714
[2026-02-10 11:44:44] 2026-02-10 16:43:33,088 | INFO     | sum of deviations: -1396547985.351162
[2026-02-10 11:44:44] 2026-02-10 16:43:33,088 | INFO     | mean x: 1770733826.0305343
[2026-02-10 11:44:44] 2026-02-10 16:43:33,089 | INFO     | mean y: 2616203.7938931296
[2026-02-10 11:44:44] 2026-02-10 16:43:33,089 | INFO     | intersect: 446051149.8352693
[2026-02-10 11:44:44] 2026-02-10 16:43:33,107 | INFO     | chi2: 0.8584942110090115
[2026-02-10 11:44:44] 2026-02-10 16:43:33,107 | INFO     | current chi2=0.8584942110090115 (change=22.223692874370084 %)
[2026-02-10 11:44:44] 2026-02-10 16:43:33,108 | INFO     | left removable region: 20
[2026-02-10 11:44:44] 2026-02-10 16:43:33,108 | INFO     | sum of square deviations: 4616137700.085342
[2026-02-10 11:44:44] 2026-02-10 16:43:33,110 | INFO     | sum of deviations: -840579454.9512211
[2026-02-10 11:44:44] 2026-02-10 16:43:33,110 | INFO     | mean x: 1770733948.0609756
[2026-02-10 11:44:44] 2026-02-10 16:43:33,110 | INFO     | mean y: 2635087.1300813006
[2026-02-10 11:44:44] 2026-02-10 16:43:33,110 | INFO     | intersect: 325078366.2586915
[2026-02-10 11:44:44] 2026-02-10 16:43:33,110 | INFO     | chi2: 0.021577552495127494
[2026-02-10 11:44:44] 2026-02-10 16:43:33,111 | INFO     | current memory leak: -0.18 B/s (using 246 data points, chi2=0.02)
[2026-02-10 11:44:44] 2026-02-10 16:43:33,129 | INFO     | could have reported an average CPU frequency of 2739 MHz (13 samples)
[2026-02-10 11:44:44] 2026-02-10 16:43:33,130 | INFO     | ..............................
[2026-02-10 11:44:44] 2026-02-10 16:43:33,130 | INFO     | . Timing measurements:
[2026-02-10 11:44:44] 2026-02-10 16:43:33,130 | INFO     | . get job = 0 s
[2026-02-10 11:44:44] 2026-02-10 16:43:33,130 | INFO     | . initial setup = 36 s
[2026-02-10 11:44:44] 2026-02-10 16:43:33,130 | INFO     | . payload setup = 43 s
[2026-02-10 11:44:44] 2026-02-10 16:43:33,130 | INFO     | . stage-in = 0 s
[2026-02-10 11:44:44] 2026-02-10 16:43:33,130 | INFO     | . payload execution = 16579 s
[2026-02-10 11:44:44] 2026-02-10 16:43:33,130 | INFO     | . stage-out = 4 s
[2026-02-10 11:44:44] 2026-02-10 16:43:33,130 | INFO     | . log creation = 0 s
[2026-02-10 11:44:44] 2026-02-10 16:43:33,130 | INFO     | ..............................
[2026-02-10 11:44:44] 2026-02-10 16:43:33,700 | INFO     | 
[2026-02-10 11:44:44] 2026-02-10 16:43:33,700 | INFO     | job summary report
[2026-02-10 11:44:44] 2026-02-10 16:43:33,700 | INFO     | --------------------------------------------------
[2026-02-10 11:44:44] 2026-02-10 16:43:33,701 | INFO     | PanDA job id: 6996650978
[2026-02-10 11:44:44] 2026-02-10 16:43:33,701 | INFO     | task id: 48317952
[2026-02-10 11:44:44] 2026-02-10 16:43:33,701 | INFO     | errors: (none)
[2026-02-10 11:44:44] 2026-02-10 16:43:33,701 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-10 11:44:44] 2026-02-10 16:43:33,701 | INFO     | pilot state: finished 
[2026-02-10 11:44:44] 2026-02-10 16:43:33,701 | INFO     | transexitcode: 0
[2026-02-10 11:44:44] 2026-02-10 16:43:33,701 | INFO     | exeerrorcode: 0
[2026-02-10 11:44:44] 2026-02-10 16:43:33,701 | INFO     | exeerrordiag: 
[2026-02-10 11:44:44] 2026-02-10 16:43:33,701 | INFO     | exitcode: 0
[2026-02-10 11:44:44] 2026-02-10 16:43:33,701 | INFO     | exitmsg: OK
[2026-02-10 11:44:44] 2026-02-10 16:43:33,701 | INFO     | cpuconsumptiontime: 43699 s
[2026-02-10 11:44:44] 2026-02-10 16:43:33,701 | INFO     | nevents: 400
[2026-02-10 11:44:44] 2026-02-10 16:43:33,701 | INFO     | neventsw: 0
[2026-02-10 11:44:44] 2026-02-10 16:43:33,701 | INFO     | pid: 1662696
[2026-02-10 11:44:44] 2026-02-10 16:43:33,701 | INFO     | pgrp: 1662696
[2026-02-10 11:44:44] 2026-02-10 16:43:33,702 | INFO     | corecount: 9
[2026-02-10 11:44:44] 2026-02-10 16:43:33,702 | INFO     | event service: False
[2026-02-10 11:44:44] 2026-02-10 16:43:33,702 | INFO     | sizes: {0: 2281125, 1: 2281810, 2: 2281810, 3: 2281838, 4: 2282299, 14: 2282327, 16624: 2314330, 16625: 2314329, 16630: 2323439, 16633: 2323577}
[2026-02-10 11:44:44] 2026-02-10 16:43:33,702 | INFO     | --------------------------------------------------
[2026-02-10 11:44:44] 2026-02-10 16:43:33,702 | INFO     | 
[2026-02-10 11:44:44] 2026-02-10 16:43:33,702 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-02-10 11:44:44] 2026-02-10 16:43:33,958 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-10 11:44:44] 2026-02-10 16:43:33,959 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-10 11:44:44] 2026-02-10 16:43:33,959 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-10 11:44:44] 2026-02-10 16:43:33,959 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-10 11:44:44] 2026-02-10 16:43:33,959 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-10 11:44:44] 2026-02-10 16:43:33,959 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-10 11:44:44] 2026-02-10 16:43:33,959 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-10 11:44:44] 2026-02-10 16:43:33,959 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-10 11:44:44] 2026-02-10 16:43:33,960 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-10 11:44:44] 2026-02-10 16:43:33,960 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-10 11:44:44] 2026-02-10 16:43:33,960 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-10 11:44:44] 2026-02-10 16:43:33,960 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-10 11:44:44] 2026-02-10 16:43:33,960 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-10 11:44:44] 2026-02-10 16:43:33,960 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-10 11:44:44] 2026-02-10 16:43:33,960 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-10 11:44:44] 2026-02-10 16:43:33,960 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-10 11:44:44] 2026-02-10 16:43:33,960 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-10 11:44:44] 2026-02-10 16:43:33,960 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-10 11:44:44] 2026-02-10 16:43:33,960 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-10 11:44:44] 2026-02-10 16:43:33,960 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-10 11:44:44] 2026-02-10 16:43:33,961 | INFO     | job 6996650978 has completed (purged errors)
[2026-02-10 11:44:44] 2026-02-10 16:43:33,961 | INFO     | overall cleanup function is called
[2026-02-10 11:44:44] 2026-02-10 16:43:34,989 | INFO     | --- collectZombieJob: --- 10, [1662696]
[2026-02-10 11:44:44] 2026-02-10 16:43:34,989 | INFO     | zombie collector waiting for pid 1662696
[2026-02-10 11:44:44] 2026-02-10 16:43:34,989 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-10 11:44:44] 2026-02-10 16:43:34,990 | INFO     | collected zombie processes
[2026-02-10 11:44:44] 2026-02-10 16:43:34,990 | INFO     | will attempt to kill all subprocesses of pid=1662696
[2026-02-10 11:44:44] 2026-02-10 16:43:37,181 | INFO     | process IDs to be killed: [1662696] (in reverse order)
[2026-02-10 11:44:44] 2026-02-10 16:43:38,138 | WARNING  | found no corresponding commands to process id(s)
[2026-02-10 11:44:44] 2026-02-10 16:43:38,138 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-10 11:44:44] 2026-02-10 16:43:38,215 | INFO     | did not find any defunct processes belonging to 1662696
[2026-02-10 11:44:44] 2026-02-10 16:43:38,284 | INFO     | did not find any defunct processes belonging to 1662696
[2026-02-10 11:44:44] 2026-02-10 16:43:38,284 | INFO     | ready for new job
[2026-02-10 11:44:44] 2026-02-10 16:43:38,284 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-10 11:44:44] 2026-02-10 16:43:38,310 | INFO     | **************************************
[2026-02-10 11:44:44] 2026-02-10 16:43:38,310 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-10 11:44:44] 2026-02-10 16:43:38,310 | INFO     | **************************************
[2026-02-10 11:44:44] 2026-02-10 16:43:38,310 | INFO     | 
[2026-02-10 11:44:44] 2026-02-10 16:43:38,337 | INFO     | architecture information:
[2026-02-10 11:44:44] 2026-02-10 16:43:38,361 | INFO     | executing command: cat /etc/os-release
[2026-02-10 11:44:44] 2026-02-10 16:43:38,479 | INFO     | cat /etc/os-release:
[2026-02-10 11:44:44] NAME="CentOS Linux"
[2026-02-10 11:44:44] VERSION="7 (Core)"
[2026-02-10 11:44:44] ID="centos"
[2026-02-10 11:44:44] ID_LIKE="rhel fedora"
[2026-02-10 11:44:44] VERSION_ID="7"
[2026-02-10 11:44:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-10 11:44:44] ANSI_COLOR="0;31"
[2026-02-10 11:44:44] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-10 11:44:44] HOME_URL="https://www.centos.org/"
[2026-02-10 11:44:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-10 11:44:44] 
[2026-02-10 11:44:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-10 11:44:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-10 11:44:44] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-10 11:44:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-10 11:44:44] 
[2026-02-10 11:44:44] 2026-02-10 16:43:38,480 | INFO     | **************************************
[2026-02-10 11:44:44] 2026-02-10 16:43:38,983 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-02-10 11:44:44] 2026-02-10 16:43:39,051 | INFO     | sufficient remaining disk space (90739572736 B)
[2026-02-10 11:44:44] 2026-02-10 16:43:39,052 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-10 11:44:44] 2026-02-10 16:43:39,052 | INFO     | current server update state: UPDATING_FINAL
[2026-02-10 11:44:44] 2026-02-10 16:43:39,052 | INFO     | update_server=False
[2026-02-10 11:44:44] 2026-02-10 16:43:39,052 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-10 11:44:44] 2026-02-10 16:43:39,053 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-10 11:44:44] 2026-02-10 16:43:39,054 | INFO     | all job control threads have been joined
[2026-02-10 11:44:44] 2026-02-10 16:43:39,096 | INFO     | all data control threads have been joined
[2026-02-10 11:44:44] 2026-02-10 16:43:39,181 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-10 11:44:44] 2026-02-10 16:43:39,753 | INFO     | all payload control threads have been joined
[2026-02-10 11:44:44] 2026-02-10 16:43:39,809 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-10 11:44:44] 2026-02-10 16:43:39,809 | INFO     | aborting loop
[2026-02-10 11:44:44] 2026-02-10 16:43:40,058 | INFO     | [job] retrieve thread has finished
[2026-02-10 11:44:44] 2026-02-10 16:43:40,059 | INFO     | [job] queue monitor thread has finished
[2026-02-10 11:44:44] 2026-02-10 16:43:40,060 | INFO     | [job] control thread has finished
[2026-02-10 11:44:44] 2026-02-10 16:43:40,102 | INFO     | [data] control thread has finished
[2026-02-10 11:44:44] 2026-02-10 16:43:40,292 | INFO     | [payload] execute_payloads thread has finished
[2026-02-10 11:44:44] 2026-02-10 16:43:40,509 | INFO     | [data] copytool_in thread has finished
[2026-02-10 11:44:44] 2026-02-10 16:43:40,727 | INFO     | [payload] validate_post thread has finished
[2026-02-10 11:44:44] 2026-02-10 16:43:40,759 | INFO     | [payload] control thread has finished
[2026-02-10 11:44:44] 2026-02-10 16:43:40,795 | INFO     | [job] create_data_payload thread has finished
[2026-02-10 11:44:44] 2026-02-10 16:43:40,796 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-10 11:44:44] 2026-02-10 16:43:40,815 | INFO     | [job] job monitor thread has finished
[2026-02-10 11:44:44] 2026-02-10 16:43:40,930 | INFO     | [job] validate thread has finished
[2026-02-10 11:44:44] 2026-02-10 16:43:41,188 | INFO     | [data] copytool_out thread has finished
[2026-02-10 11:44:44] 2026-02-10 16:43:41,214 | INFO     | [payload] failed_post thread has finished
[2026-02-10 11:44:44] 2026-02-10 16:43:41,523 | INFO     | [payload] validate_pre thread has finished
[2026-02-10 11:44:44] 2026-02-10 16:43:42,004 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-10 11:44:44] 2026-02-10 16:43:46,013 | INFO     | [data] queue_monitor thread has finished
[2026-02-10 11:44:44] 2026-02-10 16:44:07,008 | INFO     | PID=1657196 has CPU usage=7.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-10 11:44:44] 2026-02-10 16:44:07,012 | INFO     | .. there are 15 such processes running
[2026-02-10 11:44:44] 2026-02-10 16:44:07,012 | INFO     | found 0 job(s) in 20 queues
[2026-02-10 11:44:44] 2026-02-10 16:44:07,012 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-10 11:44:44] 2026-02-10 16:44:07,013 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-10 11:44:44] 2026-02-10 16:44:36,024 | INFO     | [monitor] cgroup control has ended
[2026-02-10 11:44:44] 2026-02-10 16:44:37,816 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139865901733696)>', '<ExcThread(monitor, started 139865266054912)>']
[2026-02-10 11:44:44] 2026-02-10 16:44:38,254 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-10 11:44:44] 2026-02-10 16:44:38,254 | INFO     | [monitor] control thread has ended
[2026-02-10 11:44:44] 2026-02-10 16:44:42,841 | INFO     | all workflow threads have been joined
[2026-02-10 11:44:44] 2026-02-10 16:44:42,841 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-10 11:44:44] 2026-02-10 16:44:42,842 | INFO     | traces error code: 0
[2026-02-10 11:44:44] 2026-02-10 16:44:42,842 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-10 11:44:44] 2026-02-10 16:44:43,225 [wrapper] ==== pilot stdout END ====
[2026-02-10 11:44:44] 2026-02-10 16:44:43,238 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-10 11:44:44] 2026-02-10 16:44:43,257 [wrapper] pilotpid: 1657196
[2026-02-10 11:44:44] 2026-02-10 16:44:43,269 [wrapper] Pilot exit status: 0
[2026-02-10 11:44:44] 2026-02-10 16:44:43,339 [wrapper] pandaids: 6996650978
[2026-02-10 11:44:44] 2026-02-10 16:44:43,863 [wrapper] cleanup supervisor_pilot 2297286 1657197
[2026-02-10 11:44:44] 2026-02-10 16:44:43,898 [wrapper] Test setup, not cleaning
[2026-02-10 11:44:44] 2026-02-10 16:44:43,929 [wrapper] apfmon messages muted
[2026-02-10 11:44:44] 2026-02-10 16:44:43,957 [wrapper] ==== wrapper stdout END ====
[2026-02-10 11:44:44] 2026-02-10 16:44:43,993 [wrapper] ==== wrapper stderr END ====
[2026-02-10 11:44:44]  *** Error codes and diagnostics ***
[2026-02-10 11:44:44]     "exeErrorCode": 0,
[2026-02-10 11:44:44]     "exeErrorDiag": "",
[2026-02-10 11:44:44]     "pilotErrorCode": 0,
[2026-02-10 11:44:44]     "pilotErrorDiag": "",
[2026-02-10 11:44:44]  *** Listing of results directory ***
[2026-02-10 11:44:44] total 674608
[2026-02-10 11:44:44] -rw-r--r--. 1 boincer umatlas    584422 Feb  2 05:55 pilot3.tar.gz
[2026-02-10 11:44:44] -rwx------. 1 boincer umatlas     36322 Feb  2 05:57 runpilot2-wrapper.sh
[2026-02-10 11:44:44] -rw-r--r--. 1 boincer umatlas      5111 Feb  2 05:58 queuedata.json
[2026-02-10 11:44:44] -rw-r--r--. 1 boincer umatlas       100 Feb 10 07:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-10 11:44:44] -rwxr-xr-x. 1 boincer umatlas      7986 Feb 10 07:04 run_atlas
[2026-02-10 11:44:44] -rw-r--r--. 1 boincer umatlas       105 Feb 10 07:04 job.xml
[2026-02-10 11:44:44] -rw-r--r--. 2 boincer umatlas 496945079 Feb 10 07:04 EVNT.48317949._000161.pool.root.1
[2026-02-10 11:44:44] -rw-r--r--. 2 boincer umatlas     15845 Feb 10 07:04 start_atlas.sh
[2026-02-10 11:44:44] drwxrwx--x. 2 boincer umatlas      4096 Feb 10 07:04 shared
[2026-02-10 11:44:44] -rw-r--r--. 2 boincer umatlas    597755 Feb 10 07:04 input.tar.gz
[2026-02-10 11:44:44] -rw-r--r--. 1 boincer umatlas         0 Feb 10 07:04 boinc_lockfile
[2026-02-10 11:44:44] -rw-r--r--. 1 boincer umatlas      2521 Feb 10 07:04 pandaJob.out
[2026-02-10 11:44:44] -rw-------. 1 boincer umatlas        57 Feb 10 07:04 setup.sh.local
[2026-02-10 11:44:44] -rw-------. 1 boincer umatlas   1009464 Feb 10 07:05 agis_schedconf.cvmfs.json
[2026-02-10 11:44:44] -rw-------. 1 boincer umatlas       444 Feb 10 07:06 workernode_map.json
[2026-02-10 11:44:44] drwx------. 5 boincer umatlas      4096 Feb 10 07:06 pilot3
[2026-02-10 11:44:44] -rw-r--r--. 1 boincer umatlas      6880 Feb 10 11:37 init_data.xml
[2026-02-10 11:44:44] -rw-------. 1 boincer umatlas 184572376 Feb 10 11:42 HITS.48317952._008576.pool.root.1
[2026-02-10 11:44:44] -rw-r--r--. 1 boincer umatlas       532 Feb 10 11:42 boinc_task_state.xml
[2026-02-10 11:44:44] -rw-------. 1 boincer umatlas        95 Feb 10 11:43 pilot_heartbeat.json
[2026-02-10 11:44:44] -rw-------. 1 boincer umatlas      1041 Feb 10 11:43 memory_monitor_summary.json
[2026-02-10 11:44:44] -rw-------. 1 boincer umatlas   1512955 Feb 10 11:43 agis_ddmendpoints.agis.ALL.json
[2026-02-10 11:44:44] -rw-------. 1 boincer umatlas    510740 Feb 10 11:43 log.48317952._008576.job.log.tgz.1
[2026-02-10 11:44:44] -rw-------. 1 boincer umatlas      6392 Feb 10 11:43 heartbeat.json
[2026-02-10 11:44:44] -rw-r--r--. 1 boincer umatlas      8192 Feb 10 11:44 boinc_mmap_file
[2026-02-10 11:44:44] -rw-r--r--. 1 boincer umatlas        28 Feb 10 11:44 wrapper_checkpoint.txt
[2026-02-10 11:44:44] -rw-------. 1 boincer umatlas      4820 Feb 10 11:44 pilotlog.txt
[2026-02-10 11:44:44] -rw-------. 1 boincer umatlas   2158619 Feb 10 11:44 log.48317952._008576.job.log.1
[2026-02-10 11:44:44] -rw-------. 1 boincer umatlas       357 Feb 10 11:44 output.list
[2026-02-10 11:44:44] -rw-r--r--. 1 boincer umatlas       620 Feb 10 11:44 runtime_log
[2026-02-10 11:44:44] -rw-------. 1 boincer umatlas   2682880 Feb 10 11:44 result.tar.gz
[2026-02-10 11:44:44] -rw-r--r--. 1 boincer umatlas      9352 Feb 10 11:44 runtime_log.err
[2026-02-10 11:44:44] -rw-------. 1 boincer umatlas       657 Feb 10 11:44 rs5KDmfn668nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm9cSKDmmvduTn.diag
[2026-02-10 11:44:44] -rw-r--r--. 1 boincer umatlas     21389 Feb 10 11:44 stderr.txt
[2026-02-10 11:44:44] HITS file was successfully produced:
[2026-02-10 11:44:44] -rw-------. 1 boincer umatlas 184572376 Feb 10 11:42 shared/HITS.pool.root.1
[2026-02-10 11:44:44]  *** Contents of shared directory: ***
[2026-02-10 11:44:44] total 668776
[2026-02-10 11:44:44] -rw-r--r--. 2 boincer umatlas 496945079 Feb 10 07:04 ATLAS.root_0
[2026-02-10 11:44:44] -rw-r--r--. 2 boincer umatlas     15845 Feb 10 07:04 start_atlas.sh
[2026-02-10 11:44:44] -rw-r--r--. 2 boincer umatlas    597755 Feb 10 07:04 input.tar.gz
[2026-02-10 11:44:44] -rw-------. 1 boincer umatlas 184572376 Feb 10 11:42 HITS.pool.root.1
[2026-02-10 11:44:44] -rw-------. 1 boincer umatlas   2682880 Feb 10 11:44 result.tar.gz
11:44:46 (1652520): run_atlas exited; CPU time 44389.892207
11:44:46 (1652520): called boinc_finish(0)

</stderr_txt>
]]>

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