Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
22:05:18 (4066070): wrapper (7.7.26015): starting
22:05:18 (4066070): wrapper: running run_atlas (--nthreads 3)
[2026-02-10 22:05:18] Arguments: --nthreads 3
[2026-02-10 22:05:18] Threads: 3
[2026-02-10 22:05:18] Checking for CVMFS
[2026-02-10 22:05:18] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-10 22:05:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-10 22:05:19] Running cvmfs_config stat atlas.cern.ch
[2026-02-10 22:05:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-10 22:05:19] 2.9.2.0 3117265 6745 82036 156089 3 188 25108297 36864000 0 130560 0 2734654 99.984 225152 6392 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-10 22:05:19] CVMFS is ok
[2026-02-10 22:05:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-10 22:05:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-10 22:05:19] Further information can be found at the LHC@home message board.
[2026-02-10 22:05:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-10 22:05:19] Checking for apptainer binary...
[2026-02-10 22:05:19] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-10 22:05:19] Running /usr/bin/apptainer --version
[2026-02-10 22:05:19] apptainer version 1.4.1-1.1
[2026-02-10 22:05:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-10 22:05:19] madmaxA273
[2026-02-10 22:05:19] apptainer works
[2026-02-10 22:05:19] Set ATHENA_PROC_NUMBER=3
[2026-02-10 22:05:19] Set ATHENA_CORE_NUMBER=3
[2026-02-10 22:05:19] Starting ATLAS job with PandaID=6993186317
[2026-02-10 22:05:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-10 23:23:51]  *** The last 200 lines of the pilot log: ***
[2026-02-10 23:23:51] 2026-02-10 22:23:21,177 | INFO     | ready for new job
[2026-02-10 23:23:51] 2026-02-10 22:23:21,177 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-10 23:23:51] 2026-02-10 22:23:21,177 | INFO     | **************************************
[2026-02-10 23:23:51] 2026-02-10 22:23:21,177 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-10 23:23:51] 2026-02-10 22:23:21,177 | INFO     | **************************************
[2026-02-10 23:23:51] 2026-02-10 22:23:21,178 | INFO     | 
[2026-02-10 23:23:51] 2026-02-10 22:23:21,178 | INFO     | architecture information:
[2026-02-10 23:23:51] 2026-02-10 22:23:21,178 | INFO     | executing command: cat /etc/os-release
[2026-02-10 23:23:51] 2026-02-10 22:23:21,187 | INFO     | cat /etc/os-release:
[2026-02-10 23:23:51] NAME="CentOS Linux"
[2026-02-10 23:23:51] VERSION="7 (Core)"
[2026-02-10 23:23:51] ID="centos"
[2026-02-10 23:23:51] ID_LIKE="rhel fedora"
[2026-02-10 23:23:51] VERSION_ID="7"
[2026-02-10 23:23:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-10 23:23:51] ANSI_COLOR="0;31"
[2026-02-10 23:23:51] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-10 23:23:51] HOME_URL="https://www.centos.org/"
[2026-02-10 23:23:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-10 23:23:51] 
[2026-02-10 23:23:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-10 23:23:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-10 23:23:51] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-10 23:23:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-10 23:23:51] 
[2026-02-10 23:23:51] 2026-02-10 22:23:21,187 | INFO     | **************************************
[2026-02-10 23:23:51] 2026-02-10 22:23:21,690 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-10 23:23:51] 2026-02-10 22:23:21,701 | INFO     | sufficient remaining disk space (330990354432 B)
[2026-02-10 23:23:51] 2026-02-10 22:23:21,702 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-10 23:23:51] 2026-02-10 22:23:21,702 | INFO     | current server update state: UPDATING_FINAL
[2026-02-10 23:23:51] 2026-02-10 22:23:21,702 | INFO     | update_server=False
[2026-02-10 23:23:51] 2026-02-10 22:23:21,702 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-10 23:23:51] 2026-02-10 22:23:21,702 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-10 23:23:51] 2026-02-10 22:23:21,991 | INFO     | all data control threads have been joined
[2026-02-10 23:23:51] 2026-02-10 22:23:22,108 | INFO     | all job control threads have been joined
[2026-02-10 23:23:51] 2026-02-10 22:23:22,174 | WARNING  | process 4074531 can no longer be monitored (due to stat problems) - aborting
[2026-02-10 23:23:51] 2026-02-10 22:23:22,201 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-10 23:23:51] 2026-02-10 22:23:22,237 | INFO     | number of running child processes to parent process 4074531: 1
[2026-02-10 23:23:51] 2026-02-10 22:23:22,237 | INFO     | maximum number of monitored processes: 6
[2026-02-10 23:23:51] 2026-02-10 22:23:22,237 | INFO     | aborting job monitoring since job object (job id=6993186317) has expired
[2026-02-10 23:23:51] 2026-02-10 22:23:22,237 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-10 23:23:51] 2026-02-10 22:23:22,237 | INFO     | will abort loop
[2026-02-10 23:23:51] 2026-02-10 22:23:22,707 | INFO     | [job] retrieve thread has finished
[2026-02-10 23:23:51] 2026-02-10 22:23:22,708 | INFO     | [job] queue monitor thread has finished
[2026-02-10 23:23:51] 2026-02-10 22:23:22,715 | INFO     | all payload control threads have been joined
[2026-02-10 23:23:51] 2026-02-10 22:23:22,888 | INFO     | job.realtimelogging is not enabled
[2026-02-10 23:23:51] 2026-02-10 22:23:22,996 | INFO     | [data] control thread has finished
[2026-02-10 23:23:51] 2026-02-10 22:23:23,109 | INFO     | [payload] execute_payloads thread has finished
[2026-02-10 23:23:51] 2026-02-10 22:23:23,114 | INFO     | [job] control thread has finished
[2026-02-10 23:23:51] 2026-02-10 22:23:23,127 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-10 23:23:51] 2026-02-10 22:23:23,219 | INFO     | [payload] failed_post thread has finished
[2026-02-10 23:23:51] 2026-02-10 22:23:23,243 | INFO     | [job] job monitor thread has finished
[2026-02-10 23:23:51] 2026-02-10 22:23:23,544 | INFO     | [job] create_data_payload thread has finished
[2026-02-10 23:23:51] 2026-02-10 22:23:23,647 | INFO     | [payload] validate_post thread has finished
[2026-02-10 23:23:51] 2026-02-10 22:23:23,721 | INFO     | [payload] control thread has finished
[2026-02-10 23:23:51] 2026-02-10 22:23:23,894 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-10 23:23:51] 2026-02-10 22:23:23,913 | INFO     | [job] validate thread has finished
[2026-02-10 23:23:51] 2026-02-10 22:23:24,092 | INFO     | [payload] validate_pre thread has finished
[2026-02-10 23:23:51] 2026-02-10 22:23:24,104 | INFO     | [data] copytool_in thread has finished
[2026-02-10 23:23:51] 2026-02-10 22:23:24,398 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-10 23:23:51] 2026-02-10 22:23:25,133 | INFO     | [data] copytool_out thread has finished
[2026-02-10 23:23:51] 2026-02-10 22:23:28,406 | INFO     | [data] queue_monitor thread has finished
[2026-02-10 23:23:51] 2026-02-10 22:23:36,725 | INFO     | [monitor] cgroup control has ended
[2026-02-10 23:23:51] 2026-02-10 22:23:37,266 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139665151956800)>', '<ExcThread(monitor, started 139664669267712)>']
[2026-02-10 23:23:51] 2026-02-10 22:23:42,292 | INFO     | all workflow threads have been joined
[2026-02-10 23:23:51] 2026-02-10 22:23:42,292 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-10 23:23:51] 2026-02-10 22:23:42,292 | INFO     | traces error code: 0
[2026-02-10 23:23:51] 2026-02-10 22:23:42,292 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-10 23:23:51] 2026-02-10 22:23:51,658 | INFO     | PID=4070109 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-10 23:23:51] 2026-02-10 22:23:51,659 | INFO     | found 0 job(s) in 20 queues
[2026-02-10 23:23:51] 2026-02-10 22:23:51,659 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-10 23:23:51] 2026-02-10 22:23:51,659 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-10 23:23:51] 2026-02-10 22:23:51,659 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-10 23:23:51] 2026-02-10 22:23:51,659 | CRITICAL | thread 'MainThread' is not alive
[2026-02-10 23:23:51] 2026-02-10 22:23:51,659 | INFO     | [monitor] control thread has ended
[2026-02-10 23:23:51] 2026-02-10 22:23:51,707 [wrapper] ==== pilot stdout END ====
[2026-02-10 23:23:51] 2026-02-10 22:23:51,709 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-10 23:23:51] 2026-02-10 22:23:51,712 [wrapper] pilotpid: 4070109
[2026-02-10 23:23:51] 2026-02-10 22:23:51,714 [wrapper] Pilot exit status: 0
[2026-02-10 23:23:51] 2026-02-10 22:23:51,721 [wrapper] pandaids: 6993186317
[2026-02-10 23:23:51] 2026-02-10 22:23:51,736 [wrapper] cleanup supervisor_pilot 4079599 4070110
[2026-02-10 23:23:51] 2026-02-10 22:23:51,738 [wrapper] Test setup, not cleaning
[2026-02-10 23:23:51] 2026-02-10 22:23:51,741 [wrapper] apfmon messages muted
[2026-02-10 23:23:51] 2026-02-10 22:23:51,743 [wrapper] ==== wrapper stdout END ====
[2026-02-10 23:23:51] 2026-02-10 22:23:51,745 [wrapper] ==== wrapper stderr END ====
[2026-02-10 23:23:51]  *** Error codes and diagnostics ***
[2026-02-10 23:23:51]     "exeErrorCode": 0,
[2026-02-10 23:23:51]     "exeErrorDiag": "",
[2026-02-10 23:23:51]     "pilotErrorCode": 0,
[2026-02-10 23:23:51]     "pilotErrorDiag": "",
[2026-02-10 23:23:51]  *** Listing of results directory ***
[2026-02-10 23:23:51] total 662428
[2026-02-10 23:23:51] -rw-r--r-- 1 boinc boinc    584422 Feb  2 04:02 pilot3.tar.gz
[2026-02-10 23:23:51] -rwx------ 1 boinc boinc     36322 Feb  2 04:04 runpilot2-wrapper.sh
[2026-02-10 23:23:51] -rw-r--r-- 1 boinc boinc      5111 Feb  2 04:05 queuedata.json
[2026-02-10 23:23:51] -rw-r--r-- 1 boinc boinc       100 Feb 10 22:05 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-10 23:23:51] -rwxr-xr-x 1 boinc boinc      7986 Feb 10 22:05 run_atlas
[2026-02-10 23:23:51] -rw-r--r-- 1 boinc boinc       105 Feb 10 22:05 job.xml
[2026-02-10 23:23:51] -rw-r--r-- 2 boinc boinc 495837138 Feb 10 22:05 EVNT.48442027._000014.pool.root.1
[2026-02-10 23:23:51] -rw-r--r-- 2 boinc boinc    597749 Feb 10 22:05 input.tar.gz
[2026-02-10 23:23:51] -rw-r--r-- 2 boinc boinc     15845 Feb 10 22:05 start_atlas.sh
[2026-02-10 23:23:51] drwxrwx--x 2 boinc boinc      4096 Feb 10 22:05 shared
[2026-02-10 23:23:51] -rw-r--r-- 1 boinc boinc         0 Feb 10 22:05 boinc_setup_complete
[2026-02-10 23:23:51] -rw-r--r-- 1 boinc boinc      6443 Feb 10 22:05 init_data.xml
[2026-02-10 23:23:51] -rw-r--r-- 1 boinc boinc         0 Feb 10 22:05 boinc_lockfile
[2026-02-10 23:23:51] -rw-r--r-- 1 boinc boinc      2526 Feb 10 22:05 pandaJob.out
[2026-02-10 23:23:51] -rw------- 1 boinc boinc   1009534 Feb 10 22:05 agis_schedconf.cvmfs.json
[2026-02-10 23:23:51] -rw------- 1 boinc boinc   1512955 Feb 10 22:05 agis_ddmendpoints.agis.ALL.json
[2026-02-10 23:23:51] -rw------- 1 boinc boinc       430 Feb 10 22:05 workernode_map.json
[2026-02-10 23:23:51] drwx------ 5 boinc boinc      4096 Feb 10 22:05 pilot3
[2026-02-10 23:23:51] -rw------- 1 boinc boinc 176671431 Feb 10 23:22 HITS.48442031._000673.pool.root.1
[2026-02-10 23:23:51] -rw-r--r-- 1 boinc boinc       530 Feb 10 23:23 boinc_task_state.xml
[2026-02-10 23:23:51] -rw------- 1 boinc boinc      1024 Feb 10 23:23 memory_monitor_summary.json
[2026-02-10 23:23:51] -rw------- 1 boinc boinc    261257 Feb 10 23:23 log.48442031._000673.job.log.tgz.1
[2026-02-10 23:23:51] -rw------- 1 boinc boinc      6326 Feb 10 23:23 heartbeat.json
[2026-02-10 23:23:51] -rw-r--r-- 1 boinc boinc      8192 Feb 10 23:23 boinc_mmap_file
[2026-02-10 23:23:51] -rw-r--r-- 1 boinc boinc        27 Feb 10 23:23 wrapper_checkpoint.txt
[2026-02-10 23:23:51] -rw------- 1 boinc boinc       817 Feb 10 23:23 pilotlog.txt
[2026-02-10 23:23:51] -rw------- 1 boinc boinc        95 Feb 10 23:23 pilot_heartbeat.json
[2026-02-10 23:23:51] -rw------- 1 boinc boinc    688416 Feb 10 23:23 log.48442031._000673.job.log.1
[2026-02-10 23:23:51] -rw------- 1 boinc boinc       357 Feb 10 23:23 output.list
[2026-02-10 23:23:51] -rw-r--r-- 1 boinc boinc       620 Feb 10 23:23 runtime_log
[2026-02-10 23:23:51] -rw------- 1 boinc boinc    962560 Feb 10 23:23 result.tar.gz
[2026-02-10 23:23:51] -rw-r--r-- 1 boinc boinc      8916 Feb 10 23:23 runtime_log.err
[2026-02-10 23:23:51] -rw------- 1 boinc boinc       661 Feb 10 23:23 nuXLDmWPz68n9Rq4apOajLDm4fhM0noT9bVooX4SDmORRKDm0wUaim.diag
[2026-02-10 23:23:51] -rw-r--r-- 1 boinc boinc     10347 Feb 10 23:23 stderr.txt
[2026-02-10 23:23:51] HITS file was successfully produced:
[2026-02-10 23:23:51] -rw------- 1 boinc boinc 176671431 Feb 10 23:22 shared/HITS.pool.root.1
[2026-02-10 23:23:51]  *** Contents of shared directory: ***
[2026-02-10 23:23:51] total 658296
[2026-02-10 23:23:51] -rw-r--r-- 2 boinc boinc 495837138 Feb 10 22:05 ATLAS.root_0
[2026-02-10 23:23:51] -rw-r--r-- 2 boinc boinc    597749 Feb 10 22:05 input.tar.gz
[2026-02-10 23:23:51] -rw-r--r-- 2 boinc boinc     15845 Feb 10 22:05 start_atlas.sh
[2026-02-10 23:23:51] -rw------- 1 boinc boinc 176671431 Feb 10 23:22 HITS.pool.root.1
[2026-02-10 23:23:51] -rw------- 1 boinc boinc    962560 Feb 10 23:23 result.tar.gz
23:23:52 (4066070): run_atlas exited; CPU time 13300.044428
23:23:52 (4066070): called boinc_finish(0)

</stderr_txt>
]]>

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