Stderr output

<core_client_version>8.2.6</core_client_version>
<![CDATA[
<stderr_txt>
03:08:05 (1022851): wrapper (7.7.26015): starting
03:08:05 (1022851): wrapper: running run_atlas (--nthreads 4)
[2026-02-12 03:08:05] Arguments: --nthreads 4
[2026-02-12 03:08:05] Threads: 4
[2026-02-12 03:08:05] Checking for CVMFS
[2026-02-12 03:08:05] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-12 03:08:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-12 03:08:05] Running cvmfs_config stat atlas.cern.ch
[2026-02-12 03:08:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-12 03:08:05] 2.13.3.0 639369 4890 39244 156134 1 50 25220967 33554432 0 130560 0 1865126 99.985 151507 197 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://127.0.0.1:25468 1
[2026-02-12 03:08:05] CVMFS is ok
[2026-02-12 03:08:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-12 03:08:05] Checking for apptainer binary...
[2026-02-12 03:08:05] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-12 03:08:05] Running /usr/bin/apptainer --version
[2026-02-12 03:08:05] apptainer version 1.4.5
[2026-02-12 03:08:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-12 03:08:05] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) Evangelos-Katikos
[2026-02-12 03:08:05] apptainer works
[2026-02-12 03:08:05] Set ATHENA_PROC_NUMBER=4
[2026-02-12 03:08:05] Set ATHENA_CORE_NUMBER=4
[2026-02-12 03:08:05] Starting ATLAS job with PandaID=7010004362
[2026-02-12 03:08:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/ek/BOINC/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-12 04:32:27]  *** The last 200 lines of the pilot log: ***
[2026-02-12 04:32:27]  filetype=log
[2026-02-12 04:32:27]  guid=714943a0-f717-4f63-9d69-cd721d855dd5
[2026-02-12 04:32:27]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-12 04:32:27]  is_altstaged=None
[2026-02-12 04:32:27]  is_tar=False
[2026-02-12 04:32:27]  lfn=log.48431096._021803.job.log.tgz.1
[2026-02-12 04:32:27]  mtime=0
[2026-02-12 04:32:27]  protocol_id=None
[2026-02-12 04:32:27]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-12 04:32:27]  replicas=None
[2026-02-12 04:32:27]  scope=mc23_13p6TeV
[2026-02-12 04:32:27]  status=None
[2026-02-12 04:32:27]  status_code=0
[2026-02-12 04:32:27]  storage_token=
[2026-02-12 04:32:27]  surl=/home/ek/BOINC/slots/0/PanDA_Pilot-7010004362/log.48431096._021803.job.log.tgz.1
[2026-02-12 04:32:27]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a2/62/log.48431096._021803.job.log.tgz.1
[2026-02-12 04:32:27]  workdir=None
[2026-02-12 04:32:27] ]
[2026-02-12 04:32:27] 2026-02-12 02:31:36,982 | INFO     | transferring file log.48431096._021803.job.log.tgz.1 from /home/ek/BOINC/slots/0/PanDA_Pilot-7010004362/log.48431096._021803.job.log.tgz.1 to /home/ek/BOINC/slots/
[2026-02-12 04:32:27] 2026-02-12 02:31:36,982 | INFO     | executing command: /usr/bin/env mv /home/ek/BOINC/slots/0/PanDA_Pilot-7010004362/log.48431096._021803.job.log.tgz.1 /home/ek/BOINC/slots/0/log.48431096._021803.job
[2026-02-12 04:32:27] 2026-02-12 02:31:36,990 | INFO     | adding to output.list: log.48431096._021803.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a2/62/log.48431096._021803.job.log.tg
[2026-02-12 04:32:27] 2026-02-12 02:31:36,990 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-12 04:32:27] 2026-02-12 02:31:36,991 | INFO     | summary of transferred files:
[2026-02-12 04:32:27] 2026-02-12 02:31:36,991 | INFO     |  -- lfn=log.48431096._021803.job.log.tgz.1, status_code=0, status=transferred
[2026-02-12 04:32:27] 2026-02-12 02:31:36,991 | INFO     | stage-out finished correctly
[2026-02-12 04:32:27] 2026-02-12 02:31:37,801 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-12 04:32:27] 2026-02-12 02:31:37,827 | INFO     | job 7010004362 has state=finished
[2026-02-12 04:32:27] 2026-02-12 02:31:37,827 | INFO     | preparing for final server update for job 7010004362 in state='finished'
[2026-02-12 04:32:27] 2026-02-12 02:31:37,827 | INFO     | reading metadata from: /home/ek/BOINC/slots/0/PanDA_Pilot-7010004362/jobReport.json
[2026-02-12 04:32:27] 2026-02-12 02:31:37,828 | INFO     | added worker_node to metadata from /home/ek/BOINC/slots/0/workernode_map.json
[2026-02-12 04:32:27] 2026-02-12 02:31:37,828 | INFO     | this job has now completed (state=finished)
[2026-02-12 04:32:27] 2026-02-12 02:31:37,828 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-12 04:32:27] 2026-02-12 02:31:37,828 | INFO     | log transfer has been attempted: DONE
[2026-02-12 04:32:27] 2026-02-12 02:31:37,828 | INFO     | job 7010004362 has finished - writing final server update
[2026-02-12 04:32:27] 2026-02-12 02:31:37,829 | INFO     | total number of processed events: 400 (read)
[2026-02-12 04:32:27] 2026-02-12 02:31:37,830 | INFO     | using path: /home/ek/BOINC/slots/0/PanDA_Pilot-7010004362/memory_monitor_summary.json (trf name=prmon)
[2026-02-12 04:32:27] 2026-02-12 02:31:37,831 | INFO     | extracted standard info from prmon json
[2026-02-12 04:32:27] 2026-02-12 02:31:37,831 | INFO     | extracted standard memory fields from prmon json
[2026-02-12 04:32:27] 2026-02-12 02:31:37,831 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-12 04:32:27] 2026-02-12 02:31:37,831 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-12 04:32:27] 2026-02-12 02:31:37,831 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-12 04:32:27] 2026-02-12 02:31:37,831 | INFO     | fitting pss+swap vs Time
[2026-02-12 04:32:27] 2026-02-12 02:31:37,832 | INFO     | sum of square deviations: 130793150.0
[2026-02-12 04:32:27] 2026-02-12 02:31:37,832 | INFO     | sum of deviations: -3785120454.9999995
[2026-02-12 04:32:27] 2026-02-12 02:31:37,832 | INFO     | mean x: 1770861071.0
[2026-02-12 04:32:27] 2026-02-12 02:31:37,832 | INFO     | mean y: 2435469.1733333333
[2026-02-12 04:32:27] 2026-02-12 02:31:37,832 | INFO     | intersect: 51250703920.58157
[2026-02-12 04:32:27] 2026-02-12 02:31:37,832 | INFO     | chi2: 0.09301217504208473
[2026-02-12 04:32:27] 2026-02-12 02:31:37,832 | INFO     | current memory leak: -28.94 B/s (using 75 data points, chi2=0.09)
[2026-02-12 04:32:27] 2026-02-12 02:31:37,832 | INFO     | could have reported an average CPU frequency of 3437 MHz (6 samples)
[2026-02-12 04:32:27] 2026-02-12 02:31:37,832 | INFO     | ..............................
[2026-02-12 04:32:27] 2026-02-12 02:31:37,832 | INFO     | . Timing measurements:
[2026-02-12 04:32:27] 2026-02-12 02:31:37,832 | INFO     | . get job = 0 s
[2026-02-12 04:32:27] 2026-02-12 02:31:37,832 | INFO     | . initial setup = 3 s
[2026-02-12 04:32:27] 2026-02-12 02:31:37,832 | INFO     | . payload setup = 2 s
[2026-02-12 04:32:27] 2026-02-12 02:31:37,832 | INFO     | . stage-in = 0 s
[2026-02-12 04:32:27] 2026-02-12 02:31:37,832 | INFO     | . payload execution = 4986 s
[2026-02-12 04:32:27] 2026-02-12 02:31:37,832 | INFO     | . stage-out = 0 s
[2026-02-12 04:32:27] 2026-02-12 02:31:37,832 | INFO     | . log creation = 0 s
[2026-02-12 04:32:27] 2026-02-12 02:31:37,832 | INFO     | ..............................
[2026-02-12 04:32:27] 2026-02-12 02:31:37,856 | INFO     | 
[2026-02-12 04:32:27] 2026-02-12 02:31:37,856 | INFO     | job summary report
[2026-02-12 04:32:27] 2026-02-12 02:31:37,856 | INFO     | --------------------------------------------------
[2026-02-12 04:32:27] 2026-02-12 02:31:37,856 | INFO     | PanDA job id: 7010004362
[2026-02-12 04:32:27] 2026-02-12 02:31:37,856 | INFO     | task id: 48431096
[2026-02-12 04:32:27] 2026-02-12 02:31:37,856 | INFO     | errors: (none)
[2026-02-12 04:32:27] 2026-02-12 02:31:37,856 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-12 04:32:27] 2026-02-12 02:31:37,856 | INFO     | pilot state: finished 
[2026-02-12 04:32:27] 2026-02-12 02:31:37,856 | INFO     | transexitcode: 0
[2026-02-12 04:32:27] 2026-02-12 02:31:37,856 | INFO     | exeerrorcode: 0
[2026-02-12 04:32:27] 2026-02-12 02:31:37,856 | INFO     | exeerrordiag: 
[2026-02-12 04:32:27] 2026-02-12 02:31:37,856 | INFO     | exitcode: 0
[2026-02-12 04:32:27] 2026-02-12 02:31:37,856 | INFO     | exitmsg: OK
[2026-02-12 04:32:27] 2026-02-12 02:31:37,856 | INFO     | cpuconsumptiontime: 19025 s
[2026-02-12 04:32:27] 2026-02-12 02:31:37,857 | INFO     | nevents: 400
[2026-02-12 04:32:27] 2026-02-12 02:31:37,857 | INFO     | neventsw: 0
[2026-02-12 04:32:27] 2026-02-12 02:31:37,857 | INFO     | pid: 1031326
[2026-02-12 04:32:27] 2026-02-12 02:31:37,857 | INFO     | pgrp: 1031326
[2026-02-12 04:32:27] 2026-02-12 02:31:37,857 | INFO     | corecount: 4
[2026-02-12 04:32:27] 2026-02-12 02:31:37,857 | INFO     | event service: False
[2026-02-12 04:32:27] 2026-02-12 02:31:37,857 | INFO     | sizes: {0: 2282215, 11: 2282215, 4992: 2317688, 4993: 2317882}
[2026-02-12 04:32:27] 2026-02-12 02:31:37,857 | INFO     | --------------------------------------------------
[2026-02-12 04:32:27] 2026-02-12 02:31:37,857 | INFO     | 
[2026-02-12 04:32:27] 2026-02-12 02:31:37,857 | INFO     | executing command: ls -lF /home/ek/BOINC/slots/0
[2026-02-12 04:32:27] 2026-02-12 02:31:37,864 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-12 04:32:27] 2026-02-12 02:31:37,864 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-12 04:32:27] 2026-02-12 02:31:37,864 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-12 04:32:27] 2026-02-12 02:31:37,865 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-12 04:32:27] 2026-02-12 02:31:37,865 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-12 04:32:27] 2026-02-12 02:31:37,865 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-12 04:32:27] 2026-02-12 02:31:37,865 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-12 04:32:27] 2026-02-12 02:31:37,865 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-12 04:32:27] 2026-02-12 02:31:37,865 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-12 04:32:27] 2026-02-12 02:31:37,865 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-12 04:32:27] 2026-02-12 02:31:37,865 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-12 04:32:27] 2026-02-12 02:31:37,865 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-12 04:32:27] 2026-02-12 02:31:37,865 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-12 04:32:27] 2026-02-12 02:31:37,865 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-12 04:32:27] 2026-02-12 02:31:37,865 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-12 04:32:27] 2026-02-12 02:31:37,865 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-12 04:32:27] 2026-02-12 02:31:37,865 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-12 04:32:27] 2026-02-12 02:31:37,865 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-12 04:32:27] 2026-02-12 02:31:37,865 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-12 04:32:27] 2026-02-12 02:31:37,865 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-12 04:32:27] 2026-02-12 02:31:37,865 | INFO     | job 7010004362 has completed (purged errors)
[2026-02-12 04:32:27] 2026-02-12 02:31:37,865 | INFO     | overall cleanup function is called
[2026-02-12 04:32:27] 2026-02-12 02:31:38,871 | INFO     | --- collectZombieJob: --- 10, [1031326]
[2026-02-12 04:32:27] 2026-02-12 02:31:38,871 | INFO     | zombie collector waiting for pid 1031326
[2026-02-12 04:32:27] 2026-02-12 02:31:38,871 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-12 04:32:27] 2026-02-12 02:31:38,872 | INFO     | collected zombie processes
[2026-02-12 04:32:27] 2026-02-12 02:31:38,872 | INFO     | will attempt to kill all subprocesses of pid=1031326
[2026-02-12 04:32:27] 2026-02-12 02:31:38,953 | INFO     | process IDs to be killed: [1031326] (in reverse order)
[2026-02-12 04:32:27] 2026-02-12 02:31:38,984 | WARNING  | found no corresponding commands to process id(s)
[2026-02-12 04:32:27] 2026-02-12 02:31:38,984 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-12 04:32:27] 2026-02-12 02:31:38,986 | INFO     | did not find any defunct processes belonging to 1031326
[2026-02-12 04:32:27] 2026-02-12 02:31:38,988 | INFO     | did not find any defunct processes belonging to 1031326
[2026-02-12 04:32:27] 2026-02-12 02:31:38,989 | INFO     | ready for new job
[2026-02-12 04:32:27] 2026-02-12 02:31:38,989 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-12 04:32:27] 2026-02-12 02:31:38,989 | INFO     | **************************************
[2026-02-12 04:32:27] 2026-02-12 02:31:38,989 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-12 04:32:27] 2026-02-12 02:31:38,989 | INFO     | **************************************
[2026-02-12 04:32:27] 2026-02-12 02:31:38,989 | INFO     | 
[2026-02-12 04:32:27] 2026-02-12 02:31:38,990 | INFO     | architecture information:
[2026-02-12 04:32:27] 2026-02-12 02:31:38,990 | INFO     | executing command: cat /etc/os-release
[2026-02-12 04:32:27] 2026-02-12 02:31:38,996 | INFO     | cat /etc/os-release:
[2026-02-12 04:32:27] NAME="CentOS Linux"
[2026-02-12 04:32:27] VERSION="7 (Core)"
[2026-02-12 04:32:27] ID="centos"
[2026-02-12 04:32:27] ID_LIKE="rhel fedora"
[2026-02-12 04:32:27] VERSION_ID="7"
[2026-02-12 04:32:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-12 04:32:27] ANSI_COLOR="0;31"
[2026-02-12 04:32:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-12 04:32:27] HOME_URL="https://www.centos.org/"
[2026-02-12 04:32:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-12 04:32:27] 
[2026-02-12 04:32:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-12 04:32:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-12 04:32:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-12 04:32:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-12 04:32:27] 
[2026-02-12 04:32:27] 2026-02-12 02:31:38,996 | INFO     | **************************************
[2026-02-12 04:32:27] 2026-02-12 02:31:39,499 | INFO     | executing command: df -mP /home/ek/BOINC/slots/0
[2026-02-12 04:32:27] 2026-02-12 02:31:39,506 | INFO     | sufficient remaining disk space (58599669760 B)
[2026-02-12 04:32:27] 2026-02-12 02:31:39,506 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-12 04:32:27] 2026-02-12 02:31:39,506 | INFO     | current server update state: UPDATING_FINAL
[2026-02-12 04:32:27] 2026-02-12 02:31:39,506 | INFO     | update_server=False
[2026-02-12 04:32:27] 2026-02-12 02:31:39,506 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-12 04:32:27] 2026-02-12 02:31:39,507 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-12 04:32:27] 2026-02-12 02:31:39,507 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-12 04:32:27] 2026-02-12 02:31:40,021 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-12 04:32:27] 2026-02-12 02:31:40,283 | INFO     | all job control threads have been joined
[2026-02-12 04:32:27] 2026-02-12 02:31:40,345 | INFO     | all data control threads have been joined
[2026-02-12 04:32:27] 2026-02-12 02:31:40,363 | INFO     | all payload control threads have been joined
[2026-02-12 04:32:27] 2026-02-12 02:31:40,511 | INFO     | [job] retrieve thread has finished
[2026-02-12 04:32:27] 2026-02-12 02:31:40,512 | INFO     | [job] queue monitor thread has finished
[2026-02-12 04:32:27] 2026-02-12 02:31:40,525 | INFO     | [data] copytool_in thread has finished
[2026-02-12 04:32:27] 2026-02-12 02:31:40,618 | INFO     | [payload] execute_payloads thread has finished
[2026-02-12 04:32:27] 2026-02-12 02:31:40,844 | INFO     | [payload] validate_post thread has finished
[2026-02-12 04:32:27] 2026-02-12 02:31:41,158 | INFO     | [payload] failed_post thread has finished
[2026-02-12 04:32:27] 2026-02-12 02:31:41,289 | INFO     | [job] control thread has finished
[2026-02-12 04:32:27] 2026-02-12 02:31:41,350 | INFO     | [data] control thread has finished
[2026-02-12 04:32:27] 2026-02-12 02:31:41,365 | INFO     | [payload] control thread has finished
[2026-02-12 04:32:27] 2026-02-12 02:31:41,598 | WARNING  | process 1031326 can no longer be monitored (due to stat problems) - aborting
[2026-02-12 04:32:27] 2026-02-12 02:31:41,649 | INFO     | using path: /home/ek/BOINC/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-12 04:32:27] 2026-02-12 02:31:41,724 | INFO     | number of running child processes to parent process 1031326: 1
[2026-02-12 04:32:27] 2026-02-12 02:31:41,724 | INFO     | maximum number of monitored processes: 6
[2026-02-12 04:32:27] 2026-02-12 02:31:41,724 | INFO     | aborting job monitoring since job object (job id=7010004362) has expired
[2026-02-12 04:32:27] 2026-02-12 02:31:41,724 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-12 04:32:27] 2026-02-12 02:31:41,724 | INFO     | will abort loop
[2026-02-12 04:32:27] 2026-02-12 02:31:41,833 | INFO     | [job] validate thread has finished
[2026-02-12 04:32:27] 2026-02-12 02:31:41,871 | INFO     | [job] create_data_payload thread has finished
[2026-02-12 04:32:27] 2026-02-12 02:31:41,875 | INFO     | [payload] validate_pre thread has finished
[2026-02-12 04:32:27] 2026-02-12 02:31:42,027 | INFO     | [data] copytool_out thread has finished
[2026-02-12 04:32:27] 2026-02-12 02:31:42,729 | INFO     | [job] job monitor thread has finished
[2026-02-12 04:32:27] 2026-02-12 02:31:43,513 | INFO     | [data] queue_monitor thread has finished
[2026-02-12 04:32:27] 2026-02-12 02:31:49,577 | INFO     | job.realtimelogging is not enabled
[2026-02-12 04:32:27] 2026-02-12 02:31:50,582 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-12 04:32:27] 2026-02-12 02:32:09,078 | INFO     | PID=1026668 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-12 04:32:27] 2026-02-12 02:32:09,079 | INFO     | found 0 job(s) in 20 queues
[2026-02-12 04:32:27] 2026-02-12 02:32:09,079 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-12 04:32:27] 2026-02-12 02:32:09,079 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-12 04:32:27] 2026-02-12 02:32:20,768 | INFO     | [monitor] cgroup control has ended
[2026-02-12 04:32:27] 2026-02-12 02:32:21,909 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139980447700800)>', '<ExcThread(monitor, started 139979795707648)>']
[2026-02-12 04:32:27] 2026-02-12 02:32:22,138 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-12 04:32:27] 2026-02-12 02:32:22,138 | INFO     | [monitor] control thread has ended
[2026-02-12 04:32:27] 2026-02-12 02:32:26,934 | INFO     | all workflow threads have been joined
[2026-02-12 04:32:27] 2026-02-12 02:32:26,935 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-12 04:32:27] 2026-02-12 02:32:26,935 | INFO     | traces error code: 0
[2026-02-12 04:32:27] 2026-02-12 02:32:26,935 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-12 04:32:27] 2026-02-12 02:32:26,979 [wrapper] ==== pilot stdout END ====
[2026-02-12 04:32:27] 2026-02-12 02:32:26,980 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-12 04:32:27] 2026-02-12 02:32:26,982 [wrapper] pilotpid: 1026668
[2026-02-12 04:32:27] 2026-02-12 02:32:26,983 [wrapper] Pilot exit status: 0
[2026-02-12 04:32:27] 2026-02-12 02:32:26,989 [wrapper] pandaids: 7010004362
[2026-02-12 04:32:27] 2026-02-12 02:32:27,008 [wrapper] cleanup supervisor_pilot 1089552 1026669
[2026-02-12 04:32:27] 2026-02-12 02:32:27,009 [wrapper] Test setup, not cleaning
[2026-02-12 04:32:27] 2026-02-12 02:32:27,011 [wrapper] apfmon messages muted
[2026-02-12 04:32:27] 2026-02-12 02:32:27,012 [wrapper] ==== wrapper stdout END ====
[2026-02-12 04:32:27] 2026-02-12 02:32:27,014 [wrapper] ==== wrapper stderr END ====
[2026-02-12 04:32:27]  *** Error codes and diagnostics ***
[2026-02-12 04:32:27]     "exeErrorCode": 0,
[2026-02-12 04:32:27]     "exeErrorDiag": "",
[2026-02-12 04:32:27]     "pilotErrorCode": 0,
[2026-02-12 04:32:27]     "pilotErrorDiag": "",
[2026-02-12 04:32:27]  *** Listing of results directory ***
[2026-02-12 04:32:27] total 939964
[2026-02-12 04:32:27] -rwx------ 1 ek ek     36322 Feb 10 07:22 runpilot2-wrapper.sh
[2026-02-12 04:32:27] -rw-r--r-- 1 ek ek      5111 Feb 10 07:25 queuedata.json
[2026-02-12 04:32:27] -rw-r--r-- 1 ek ek    584627 Feb 10 07:25 pilot3.tar.gz
[2026-02-12 04:32:27] -rw-rw-r-- 1 ek ek       100 Feb 12 03:08 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-12 04:32:27] -rwxr-xr-x 1 ek ek      7986 Feb 12 03:08 run_atlas
[2026-02-12 04:32:27] -rw-rw-r-- 1 ek ek       105 Feb 12 03:08 job.xml
[2026-02-12 04:32:27] -rw-r--r-- 2 ek ek 677825535 Feb 12 03:08 EVNT.48431094._000480.pool.root.1
[2026-02-12 04:32:27] drwxrwx--x 2 ek ek      4096 Feb 12 03:08 shared
[2026-02-12 04:32:27] -rw-r--r-- 2 ek ek    597959 Feb 12 03:08 input.tar.gz
[2026-02-12 04:32:27] -rw-r--r-- 2 ek ek     15845 Feb 12 03:08 start_atlas.sh
[2026-02-12 04:32:27] -rw-rw-r-- 1 ek ek         0 Feb 12 03:08 boinc_setup_complete
[2026-02-12 04:32:27] -rw-rw-r-- 1 ek ek      9841 Feb 12 03:08 init_data.xml
[2026-02-12 04:32:27] -rw-rw-r-- 1 ek ek         0 Feb 12 03:08 boinc_lockfile
[2026-02-12 04:32:27] -rw-rw-r-- 1 ek ek      2556 Feb 12 03:08 pandaJob.out
[2026-02-12 04:32:27] -rw------- 1 ek ek        50 Feb 12 03:08 setup.sh.local
[2026-02-12 04:32:27] -rw------- 1 ek ek   1005057 Feb 12 03:08 agis_schedconf.cvmfs.json
[2026-02-12 04:32:27] -rw------- 1 ek ek   1512955 Feb 12 03:08 agis_ddmendpoints.agis.ALL.json
[2026-02-12 04:32:27] -rw------- 1 ek ek       432 Feb 12 03:08 workernode_map.json
[2026-02-12 04:32:27] drwx------ 5 ek ek      4096 Feb 12 03:08 pilot3
[2026-02-12 04:32:27] -rw------- 1 ek ek 278700143 Feb 12 04:31 HITS.48431096._021803.pool.root.1
[2026-02-12 04:32:27] -rw-rw-r-- 1 ek ek       530 Feb 12 04:31 boinc_task_state.xml
[2026-02-12 04:32:27] -rw------- 1 ek ek      1032 Feb 12 04:31 memory_monitor_summary.json
[2026-02-12 04:32:27] -rw------- 1 ek ek    293795 Feb 12 04:31 log.48431096._021803.job.log.tgz.1
[2026-02-12 04:32:27] -rw------- 1 ek ek      6337 Feb 12 04:31 heartbeat.json
[2026-02-12 04:32:27] -rw------- 1 ek ek        95 Feb 12 04:32 pilot_heartbeat.json
[2026-02-12 04:32:27] -rw-rw-r-- 1 ek ek      8192 Feb 12 04:32 boinc_mmap_file
[2026-02-12 04:32:27] -rw-rw-r-- 1 ek ek        27 Feb 12 04:32 wrapper_checkpoint.txt
[2026-02-12 04:32:27] -rw------- 1 ek ek      5337 Feb 12 04:32 pilotlog.txt
[2026-02-12 04:32:27] -rw------- 1 ek ek    731124 Feb 12 04:32 log.48431096._021803.job.log.1
[2026-02-12 04:32:27] -rw------- 1 ek ek       357 Feb 12 04:32 output.list
[2026-02-12 04:32:27] -rw-rw-r-- 1 ek ek       620 Feb 12 04:32 runtime_log
[2026-02-12 04:32:27] -rw------- 1 ek ek   1044480 Feb 12 04:32 result.tar.gz
[2026-02-12 04:32:27] -rw-rw-r-- 1 ek ek      9501 Feb 12 04:32 runtime_log.err
[2026-02-12 04:32:27] -rw------- 1 ek ek       666 Feb 12 04:32 bOVNDmZNv98nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmzahKDmX5lmIo.diag
[2026-02-12 04:32:27] -rw-rw-r-- 1 ek ek     21107 Feb 12 04:32 stderr.txt
[2026-02-12 04:32:27] HITS file was successfully produced:
[2026-02-12 04:32:27] -rw------- 1 ek ek 278700143 Feb 12 04:31 shared/HITS.pool.root.1
[2026-02-12 04:32:27]  *** Contents of shared directory: ***
[2026-02-12 04:32:27] total 935740
[2026-02-12 04:32:27] -rw-r--r-- 2 ek ek 677825535 Feb 12 03:08 ATLAS.root_0
[2026-02-12 04:32:27] -rw-r--r-- 2 ek ek    597959 Feb 12 03:08 input.tar.gz
[2026-02-12 04:32:27] -rw-r--r-- 2 ek ek     15845 Feb 12 03:08 start_atlas.sh
[2026-02-12 04:32:27] -rw------- 1 ek ek 278700143 Feb 12 04:31 HITS.pool.root.1
[2026-02-12 04:32:27] -rw------- 1 ek ek   1044480 Feb 12 04:32 result.tar.gz
04:32:28 (1022851): run_atlas exited; CPU time 19066.624138
04:32:28 (1022851): called boinc_finish(0)

</stderr_txt>
]]>

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