Stderr output

<core_client_version>8.2.6</core_client_version>
<![CDATA[
<stderr_txt>
20:04:35 (677307): wrapper (7.7.26015): starting
20:04:35 (677307): wrapper: running run_atlas (--nthreads 4)
[2026-02-11 20:04:35] Arguments: --nthreads 4
[2026-02-11 20:04:35] Threads: 4
[2026-02-11 20:04:35] Checking for CVMFS
[2026-02-11 20:04:35] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-11 20:04:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-11 20:04:35] Running cvmfs_config stat atlas.cern.ch
[2026-02-11 20:04:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-11 20:04:35] 2.13.3.0 639369 4466 46136 156124 3 50 25169590 33554433 0 130560 0 1665960 99.985 137771 196 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://127.0.0.1:25468 1
[2026-02-11 20:04:35] CVMFS is ok
[2026-02-11 20:04:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-11 20:04:35] Checking for apptainer binary...
[2026-02-11 20:04:35] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-11 20:04:35] Running /usr/bin/apptainer --version
[2026-02-11 20:04:35] apptainer version 1.4.5
[2026-02-11 20:04:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-11 20:04:35] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) Evangelos-Katikos
[2026-02-11 20:04:35] apptainer works
[2026-02-11 20:04:35] Set ATHENA_PROC_NUMBER=4
[2026-02-11 20:04:35] Set ATHENA_CORE_NUMBER=4
[2026-02-11 20:04:35] Starting ATLAS job with PandaID=7010004336
[2026-02-11 20:04:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/ek/BOINC/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-11 21:28:03]  *** The last 200 lines of the pilot log: ***
[2026-02-11 21:28:03]  filetype=log
[2026-02-11 21:28:03]  guid=e8fcf59b-bb6f-41e6-b077-e6603e57dc2f
[2026-02-11 21:28:03]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-11 21:28:03]  is_altstaged=None
[2026-02-11 21:28:03]  is_tar=False
[2026-02-11 21:28:03]  lfn=log.48431096._021777.job.log.tgz.1
[2026-02-11 21:28:03]  mtime=0
[2026-02-11 21:28:03]  protocol_id=None
[2026-02-11 21:28:03]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-11 21:28:03]  replicas=None
[2026-02-11 21:28:03]  scope=mc23_13p6TeV
[2026-02-11 21:28:03]  status=None
[2026-02-11 21:28:03]  status_code=0
[2026-02-11 21:28:03]  storage_token=
[2026-02-11 21:28:03]  surl=/home/ek/BOINC/slots/0/PanDA_Pilot-7010004336/log.48431096._021777.job.log.tgz.1
[2026-02-11 21:28:03]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f1/d6/log.48431096._021777.job.log.tgz.1
[2026-02-11 21:28:03]  workdir=None
[2026-02-11 21:28:03] ]
[2026-02-11 21:28:03] 2026-02-11 19:27:28,532 | INFO     | transferring file log.48431096._021777.job.log.tgz.1 from /home/ek/BOINC/slots/0/PanDA_Pilot-7010004336/log.48431096._021777.job.log.tgz.1 to /home/ek/BOINC/slots/
[2026-02-11 21:28:03] 2026-02-11 19:27:28,532 | INFO     | executing command: /usr/bin/env mv /home/ek/BOINC/slots/0/PanDA_Pilot-7010004336/log.48431096._021777.job.log.tgz.1 /home/ek/BOINC/slots/0/log.48431096._021777.job
[2026-02-11 21:28:03] 2026-02-11 19:27:28,541 | INFO     | adding to output.list: log.48431096._021777.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f1/d6/log.48431096._021777.job.log.tg
[2026-02-11 21:28:03] 2026-02-11 19:27:28,541 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-11 21:28:03] 2026-02-11 19:27:28,541 | INFO     | summary of transferred files:
[2026-02-11 21:28:03] 2026-02-11 19:27:28,541 | INFO     |  -- lfn=log.48431096._021777.job.log.tgz.1, status_code=0, status=transferred
[2026-02-11 21:28:03] 2026-02-11 19:27:28,541 | INFO     | stage-out finished correctly
[2026-02-11 21:28:03] 2026-02-11 19:27:29,446 | INFO     | PID=681121 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-11 21:28:03] 2026-02-11 19:27:29,473 | WARNING  | process 685986 can no longer be monitored (due to stat problems) - aborting
[2026-02-11 21:28:03] 2026-02-11 19:27:29,473 | INFO     | using path: /home/ek/BOINC/slots/0/PanDA_Pilot-7010004336/memory_monitor_summary.json (trf name=prmon)
[2026-02-11 21:28:03] 2026-02-11 19:27:29,551 | INFO     | number of running child processes to parent process 685986: 1
[2026-02-11 21:28:03] 2026-02-11 19:27:29,551 | INFO     | maximum number of monitored processes: 6
[2026-02-11 21:28:03] 2026-02-11 19:27:30,446 | INFO     | time since job start (4968s) is within the limit (349056.0s)
[2026-02-11 21:28:03] 2026-02-11 19:27:30,874 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-11 21:28:03] 2026-02-11 19:27:30,901 | INFO     | job 7010004336 has state=finished
[2026-02-11 21:28:03] 2026-02-11 19:27:30,901 | INFO     | preparing for final server update for job 7010004336 in state='finished'
[2026-02-11 21:28:03] 2026-02-11 19:27:30,901 | INFO     | reading metadata from: /home/ek/BOINC/slots/0/PanDA_Pilot-7010004336/jobReport.json
[2026-02-11 21:28:03] 2026-02-11 19:27:30,902 | INFO     | added worker_node to metadata from /home/ek/BOINC/slots/0/workernode_map.json
[2026-02-11 21:28:03] 2026-02-11 19:27:30,902 | INFO     | this job has now completed (state=finished)
[2026-02-11 21:28:03] 2026-02-11 19:27:30,902 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-11 21:28:03] 2026-02-11 19:27:30,902 | INFO     | log transfer has been attempted: DONE
[2026-02-11 21:28:03] 2026-02-11 19:27:30,902 | INFO     | job 7010004336 has finished - writing final server update
[2026-02-11 21:28:03] 2026-02-11 19:27:30,902 | INFO     | total number of processed events: 400 (read)
[2026-02-11 21:28:03] 2026-02-11 19:27:30,903 | INFO     | using path: /home/ek/BOINC/slots/0/PanDA_Pilot-7010004336/memory_monitor_summary.json (trf name=prmon)
[2026-02-11 21:28:03] 2026-02-11 19:27:30,904 | INFO     | extracted standard info from prmon json
[2026-02-11 21:28:03] 2026-02-11 19:27:30,904 | INFO     | extracted standard memory fields from prmon json
[2026-02-11 21:28:03] 2026-02-11 19:27:30,904 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-11 21:28:03] 2026-02-11 19:27:30,904 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-11 21:28:03] 2026-02-11 19:27:30,904 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-11 21:28:03] 2026-02-11 19:27:30,904 | INFO     | fitting pss+swap vs Time
[2026-02-11 21:28:03] 2026-02-11 19:27:30,904 | INFO     | sum of square deviations: 130793150.0
[2026-02-11 21:28:03] 2026-02-11 19:27:30,904 | INFO     | sum of deviations: -2132032105.9999998
[2026-02-11 21:28:03] 2026-02-11 19:27:30,904 | INFO     | mean x: 1770835660.0
[2026-02-11 21:28:03] 2026-02-11 19:27:30,904 | INFO     | mean y: 2431788.12
[2026-02-11 21:28:03] 2026-02-11 19:27:30,904 | INFO     | intersect: 28868457887.87904
[2026-02-11 21:28:03] 2026-02-11 19:27:30,905 | INFO     | chi2: 0.06254280134454447
[2026-02-11 21:28:03] 2026-02-11 19:27:30,905 | INFO     | current memory leak: -16.30 B/s (using 75 data points, chi2=0.06)
[2026-02-11 21:28:03] 2026-02-11 19:27:30,905 | INFO     | could have reported an average CPU frequency of 3298 MHz (6 samples)
[2026-02-11 21:28:03] 2026-02-11 19:27:30,905 | INFO     | ..............................
[2026-02-11 21:28:03] 2026-02-11 19:27:30,905 | INFO     | . Timing measurements:
[2026-02-11 21:28:03] 2026-02-11 19:27:30,905 | INFO     | . get job = 0 s
[2026-02-11 21:28:03] 2026-02-11 19:27:30,905 | INFO     | . initial setup = 3 s
[2026-02-11 21:28:03] 2026-02-11 19:27:30,905 | INFO     | . payload setup = 2 s
[2026-02-11 21:28:03] 2026-02-11 19:27:30,905 | INFO     | . stage-in = 0 s
[2026-02-11 21:28:03] 2026-02-11 19:27:30,905 | INFO     | . payload execution = 4948 s
[2026-02-11 21:28:03] 2026-02-11 19:27:30,905 | INFO     | . stage-out = 0 s
[2026-02-11 21:28:03] 2026-02-11 19:27:30,905 | INFO     | . log creation = 0 s
[2026-02-11 21:28:03] 2026-02-11 19:27:30,905 | INFO     | ..............................
[2026-02-11 21:28:03] 2026-02-11 19:27:30,929 | INFO     | 
[2026-02-11 21:28:03] 2026-02-11 19:27:30,929 | INFO     | job summary report
[2026-02-11 21:28:03] 2026-02-11 19:27:30,929 | INFO     | --------------------------------------------------
[2026-02-11 21:28:03] 2026-02-11 19:27:30,929 | INFO     | PanDA job id: 7010004336
[2026-02-11 21:28:03] 2026-02-11 19:27:30,929 | INFO     | task id: 48431096
[2026-02-11 21:28:03] 2026-02-11 19:27:30,929 | INFO     | errors: (none)
[2026-02-11 21:28:03] 2026-02-11 19:27:30,929 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-11 21:28:03] 2026-02-11 19:27:30,929 | INFO     | pilot state: finished 
[2026-02-11 21:28:03] 2026-02-11 19:27:30,929 | INFO     | transexitcode: 0
[2026-02-11 21:28:03] 2026-02-11 19:27:30,929 | INFO     | exeerrorcode: 0
[2026-02-11 21:28:03] 2026-02-11 19:27:30,929 | INFO     | exeerrordiag: 
[2026-02-11 21:28:03] 2026-02-11 19:27:30,929 | INFO     | exitcode: 0
[2026-02-11 21:28:03] 2026-02-11 19:27:30,929 | INFO     | exitmsg: OK
[2026-02-11 21:28:03] 2026-02-11 19:27:30,929 | INFO     | cpuconsumptiontime: 18980 s
[2026-02-11 21:28:03] 2026-02-11 19:27:30,929 | INFO     | nevents: 400
[2026-02-11 21:28:03] 2026-02-11 19:27:30,929 | INFO     | neventsw: 0
[2026-02-11 21:28:03] 2026-02-11 19:27:30,929 | INFO     | pid: 685986
[2026-02-11 21:28:03] 2026-02-11 19:27:30,929 | INFO     | pgrp: 685986
[2026-02-11 21:28:03] 2026-02-11 19:27:30,929 | INFO     | corecount: 4
[2026-02-11 21:28:03] 2026-02-11 19:27:30,929 | INFO     | event service: False
[2026-02-11 21:28:03] 2026-02-11 19:27:30,930 | INFO     | sizes: {0: 2282213, 11: 2282213, 4954: 2308622, 4955: 2317620, 4957: 2317870}
[2026-02-11 21:28:03] 2026-02-11 19:27:30,930 | INFO     | --------------------------------------------------
[2026-02-11 21:28:03] 2026-02-11 19:27:30,930 | INFO     | 
[2026-02-11 21:28:03] 2026-02-11 19:27:30,930 | INFO     | executing command: ls -lF /home/ek/BOINC/slots/0
[2026-02-11 21:28:03] 2026-02-11 19:27:30,937 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-11 21:28:03] 2026-02-11 19:27:30,938 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-11 21:28:03] 2026-02-11 19:27:30,938 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-11 21:28:03] 2026-02-11 19:27:30,938 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-11 21:28:03] 2026-02-11 19:27:30,938 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-11 21:28:03] 2026-02-11 19:27:30,938 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-11 21:28:03] 2026-02-11 19:27:30,938 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-11 21:28:03] 2026-02-11 19:27:30,938 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-11 21:28:03] 2026-02-11 19:27:30,938 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-11 21:28:03] 2026-02-11 19:27:30,938 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-11 21:28:03] 2026-02-11 19:27:30,938 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-11 21:28:03] 2026-02-11 19:27:30,938 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-11 21:28:03] 2026-02-11 19:27:30,938 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-11 21:28:03] 2026-02-11 19:27:30,938 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-11 21:28:03] 2026-02-11 19:27:30,938 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-11 21:28:03] 2026-02-11 19:27:30,938 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-11 21:28:03] 2026-02-11 19:27:30,938 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-11 21:28:03] 2026-02-11 19:27:30,938 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-11 21:28:03] 2026-02-11 19:27:30,938 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-11 21:28:03] 2026-02-11 19:27:30,938 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-11 21:28:03] 2026-02-11 19:27:30,938 | INFO     | job 7010004336 has completed (purged errors)
[2026-02-11 21:28:03] 2026-02-11 19:27:30,938 | INFO     | overall cleanup function is called
[2026-02-11 21:28:03] 2026-02-11 19:27:31,945 | INFO     | --- collectZombieJob: --- 10, [685986]
[2026-02-11 21:28:03] 2026-02-11 19:27:31,945 | INFO     | zombie collector waiting for pid 685986
[2026-02-11 21:28:03] 2026-02-11 19:27:31,945 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-11 21:28:03] 2026-02-11 19:27:31,945 | INFO     | collected zombie processes
[2026-02-11 21:28:03] 2026-02-11 19:27:31,945 | INFO     | will attempt to kill all subprocesses of pid=685986
[2026-02-11 21:28:03] 2026-02-11 19:27:32,028 | INFO     | process IDs to be killed: [685986] (in reverse order)
[2026-02-11 21:28:03] 2026-02-11 19:27:32,058 | WARNING  | found no corresponding commands to process id(s)
[2026-02-11 21:28:03] 2026-02-11 19:27:32,058 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-11 21:28:03] 2026-02-11 19:27:32,060 | INFO     | did not find any defunct processes belonging to 685986
[2026-02-11 21:28:03] 2026-02-11 19:27:32,062 | INFO     | did not find any defunct processes belonging to 685986
[2026-02-11 21:28:03] 2026-02-11 19:27:32,062 | INFO     | ready for new job
[2026-02-11 21:28:03] 2026-02-11 19:27:32,062 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-11 21:28:03] 2026-02-11 19:27:32,063 | INFO     | **************************************
[2026-02-11 21:28:03] 2026-02-11 19:27:32,063 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-11 21:28:03] 2026-02-11 19:27:32,063 | INFO     | **************************************
[2026-02-11 21:28:03] 2026-02-11 19:27:32,063 | INFO     | 
[2026-02-11 21:28:03] 2026-02-11 19:27:32,064 | INFO     | architecture information:
[2026-02-11 21:28:03] 2026-02-11 19:27:32,064 | INFO     | executing command: cat /etc/os-release
[2026-02-11 21:28:03] 2026-02-11 19:27:32,069 | INFO     | cat /etc/os-release:
[2026-02-11 21:28:03] NAME="CentOS Linux"
[2026-02-11 21:28:03] VERSION="7 (Core)"
[2026-02-11 21:28:03] ID="centos"
[2026-02-11 21:28:03] ID_LIKE="rhel fedora"
[2026-02-11 21:28:03] VERSION_ID="7"
[2026-02-11 21:28:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-11 21:28:03] ANSI_COLOR="0;31"
[2026-02-11 21:28:03] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-11 21:28:03] HOME_URL="https://www.centos.org/"
[2026-02-11 21:28:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-11 21:28:03] 
[2026-02-11 21:28:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-11 21:28:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-11 21:28:03] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-11 21:28:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-11 21:28:03] 
[2026-02-11 21:28:03] 2026-02-11 19:27:32,069 | INFO     | **************************************
[2026-02-11 21:28:03] 2026-02-11 19:27:32,571 | INFO     | executing command: df -mP /home/ek/BOINC/slots/0
[2026-02-11 21:28:03] 2026-02-11 19:27:32,578 | INFO     | sufficient remaining disk space (59303264256 B)
[2026-02-11 21:28:03] 2026-02-11 19:27:32,579 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-11 21:28:03] 2026-02-11 19:27:32,579 | INFO     | current server update state: UPDATING_FINAL
[2026-02-11 21:28:03] 2026-02-11 19:27:32,579 | INFO     | update_server=False
[2026-02-11 21:28:03] 2026-02-11 19:27:32,579 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-11 21:28:03] 2026-02-11 19:27:32,579 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-11 21:28:03] 2026-02-11 19:27:32,579 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-11 21:28:03] 2026-02-11 19:27:32,950 | INFO     | all data control threads have been joined
[2026-02-11 21:28:03] 2026-02-11 19:27:33,059 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-11 21:28:03] 2026-02-11 19:27:33,059 | INFO     | aborting loop
[2026-02-11 21:28:03] 2026-02-11 19:27:33,137 | INFO     | all payload control threads have been joined
[2026-02-11 21:28:03] 2026-02-11 19:27:33,533 | INFO     | all job control threads have been joined
[2026-02-11 21:28:03] 2026-02-11 19:27:33,580 | INFO     | [job] retrieve thread has finished
[2026-02-11 21:28:03] 2026-02-11 19:27:33,583 | INFO     | [job] queue monitor thread has finished
[2026-02-11 21:28:03] 2026-02-11 19:27:33,955 | INFO     | [data] control thread has finished
[2026-02-11 21:28:03] 2026-02-11 19:27:34,064 | INFO     | [job] job monitor thread has finished
[2026-02-11 21:28:03] 2026-02-11 19:27:34,074 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-11 21:28:03] 2026-02-11 19:27:34,142 | INFO     | [payload] control thread has finished
[2026-02-11 21:28:03] 2026-02-11 19:27:34,209 | INFO     | [payload] execute_payloads thread has finished
[2026-02-11 21:28:03] 2026-02-11 19:27:34,538 | INFO     | [job] control thread has finished
[2026-02-11 21:28:03] 2026-02-11 19:27:34,641 | INFO     | [payload] validate_post thread has finished
[2026-02-11 21:28:03] 2026-02-11 19:27:34,767 | INFO     | [job] create_data_payload thread has finished
[2026-02-11 21:28:03] 2026-02-11 19:27:34,795 | INFO     | [job] validate thread has finished
[2026-02-11 21:28:03] 2026-02-11 19:27:34,911 | INFO     | [payload] validate_pre thread has finished
[2026-02-11 21:28:03] 2026-02-11 19:27:35,048 | INFO     | [data] copytool_in thread has finished
[2026-02-11 21:28:03] 2026-02-11 19:27:35,072 | INFO     | [payload] failed_post thread has finished
[2026-02-11 21:28:03] 2026-02-11 19:27:35,075 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-11 21:28:03] 2026-02-11 19:27:36,079 | INFO     | [data] copytool_out thread has finished
[2026-02-11 21:28:03] 2026-02-11 19:27:36,582 | INFO     | [data] queue_monitor thread has finished
[2026-02-11 21:28:03] 2026-02-11 19:27:49,136 | INFO     | [monitor] cgroup control has ended
[2026-02-11 21:28:03] 2026-02-11 19:27:49,359 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139873090176832)>', '<ExcThread(monitor, started 139872808744704)>']
[2026-02-11 21:28:03] 2026-02-11 19:27:54,384 | INFO     | all workflow threads have been joined
[2026-02-11 21:28:03] 2026-02-11 19:27:54,384 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-11 21:28:03] 2026-02-11 19:27:54,385 | INFO     | traces error code: 0
[2026-02-11 21:28:03] 2026-02-11 19:27:54,385 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-11 21:28:03] 2026-02-11 19:28:03,593 | INFO     | PID=681121 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-11 21:28:03] 2026-02-11 19:28:03,593 | INFO     | found 0 job(s) in 20 queues
[2026-02-11 21:28:03] 2026-02-11 19:28:03,593 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-11 21:28:03] 2026-02-11 19:28:03,593 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-11 21:28:03] 2026-02-11 19:28:03,593 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-11 21:28:03] 2026-02-11 19:28:03,593 | INFO     | [monitor] control thread has ended
[2026-02-11 21:28:03] 2026-02-11 19:28:03,632 [wrapper] ==== pilot stdout END ====
[2026-02-11 21:28:03] 2026-02-11 19:28:03,634 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-11 21:28:03] 2026-02-11 19:28:03,635 [wrapper] pilotpid: 681121
[2026-02-11 21:28:03] 2026-02-11 19:28:03,637 [wrapper] Pilot exit status: 0
[2026-02-11 21:28:03] 2026-02-11 19:28:03,642 [wrapper] pandaids: 7010004336
[2026-02-11 21:28:03] 2026-02-11 19:28:03,661 [wrapper] cleanup supervisor_pilot  739268 681122
[2026-02-11 21:28:03] 2026-02-11 19:28:03,662 [wrapper] Test setup, not cleaning
[2026-02-11 21:28:03] 2026-02-11 19:28:03,664 [wrapper] apfmon messages muted
[2026-02-11 21:28:03] 2026-02-11 19:28:03,665 [wrapper] ==== wrapper stdout END ====
[2026-02-11 21:28:03] 2026-02-11 19:28:03,666 [wrapper] ==== wrapper stderr END ====
[2026-02-11 21:28:03]  *** Error codes and diagnostics ***
[2026-02-11 21:28:03]     "exeErrorCode": 0,
[2026-02-11 21:28:03]     "exeErrorDiag": "",
[2026-02-11 21:28:03]     "pilotErrorCode": 0,
[2026-02-11 21:28:03]     "pilotErrorDiag": "",
[2026-02-11 21:28:03]  *** Listing of results directory ***
[2026-02-11 21:28:03] total 942596
[2026-02-11 21:28:03] -rwx------ 1 ek ek     36322 Feb 10 07:22 runpilot2-wrapper.sh
[2026-02-11 21:28:03] -rw-r--r-- 1 ek ek      5111 Feb 10 07:25 queuedata.json
[2026-02-11 21:28:03] -rw-r--r-- 1 ek ek    584627 Feb 10 07:25 pilot3.tar.gz
[2026-02-11 21:28:03] -rw-rw-r-- 1 ek ek       100 Feb 11 20:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-11 21:28:03] -rwxr-xr-x 1 ek ek      7986 Feb 11 20:04 run_atlas
[2026-02-11 21:28:03] -rw-rw-r-- 1 ek ek       105 Feb 11 20:04 job.xml
[2026-02-11 21:28:03] -rw-r--r-- 2 ek ek 677825535 Feb 11 20:04 EVNT.48431094._000480.pool.root.1
[2026-02-11 21:28:03] -rw-r--r-- 2 ek ek    597951 Feb 11 20:04 input.tar.gz
[2026-02-11 21:28:03] -rw-r--r-- 2 ek ek     15845 Feb 11 20:04 start_atlas.sh
[2026-02-11 21:28:03] drwxrwx--x 2 ek ek      4096 Feb 11 20:04 shared
[2026-02-11 21:28:03] -rw-rw-r-- 1 ek ek         0 Feb 11 20:04 boinc_setup_complete
[2026-02-11 21:28:03] -rw-rw-r-- 1 ek ek      9841 Feb 11 20:04 init_data.xml
[2026-02-11 21:28:03] -rw-rw-r-- 1 ek ek         0 Feb 11 20:04 boinc_lockfile
[2026-02-11 21:28:03] -rw-rw-r-- 1 ek ek      2555 Feb 11 20:04 pandaJob.out
[2026-02-11 21:28:03] -rw------- 1 ek ek        50 Feb 11 20:04 setup.sh.local
[2026-02-11 21:28:03] -rw------- 1 ek ek   1008160 Feb 11 20:04 agis_schedconf.cvmfs.json
[2026-02-11 21:28:03] -rw------- 1 ek ek   1512955 Feb 11 20:04 agis_ddmendpoints.agis.ALL.json
[2026-02-11 21:28:03] -rw------- 1 ek ek       433 Feb 11 20:04 workernode_map.json
[2026-02-11 21:28:03] drwx------ 5 ek ek      4096 Feb 11 20:04 pilot3
[2026-02-11 21:28:03] -rw------- 1 ek ek 281478502 Feb 11 21:27 HITS.48431096._021777.pool.root.1
[2026-02-11 21:28:03] -rw------- 1 ek ek        95 Feb 11 21:27 pilot_heartbeat.json
[2026-02-11 21:28:03] -rw-rw-r-- 1 ek ek       530 Feb 11 21:27 boinc_task_state.xml
[2026-02-11 21:28:03] -rw------- 1 ek ek      1019 Feb 11 21:27 memory_monitor_summary.json
[2026-02-11 21:28:03] -rw------- 1 ek ek    261160 Feb 11 21:27 log.48431096._021777.job.log.tgz.1
[2026-02-11 21:28:03] -rw------- 1 ek ek      6311 Feb 11 21:27 heartbeat.json
[2026-02-11 21:28:03] -rw-rw-r-- 1 ek ek      8192 Feb 11 21:27 boinc_mmap_file
[2026-02-11 21:28:03] -rw-rw-r-- 1 ek ek        27 Feb 11 21:27 wrapper_checkpoint.txt
[2026-02-11 21:28:03] -rw------- 1 ek ek       746 Feb 11 21:28 pilotlog.txt
[2026-02-11 21:28:03] -rw------- 1 ek ek    724524 Feb 11 21:28 log.48431096._021777.job.log.1
[2026-02-11 21:28:03] -rw------- 1 ek ek       357 Feb 11 21:28 output.list
[2026-02-11 21:28:03] -rw-rw-r-- 1 ek ek       620 Feb 11 21:28 runtime_log
[2026-02-11 21:28:03] -rw------- 1 ek ek   1003520 Feb 11 21:28 result.tar.gz
[2026-02-11 21:28:03] -rw-rw-r-- 1 ek ek      9501 Feb 11 21:28 runtime_log.err
[2026-02-11 21:28:03] -rw------- 1 ek ek       662 Feb 11 21:28 CQENDmZNv98nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmnahKDmJNgdQn.diag
[2026-02-11 21:28:03] -rw-rw-r-- 1 ek ek     21238 Feb 11 21:28 stderr.txt
[2026-02-11 21:28:03] HITS file was successfully produced:
[2026-02-11 21:28:03] -rw------- 1 ek ek 281478502 Feb 11 21:27 shared/HITS.pool.root.1
[2026-02-11 21:28:03]  *** Contents of shared directory: ***
[2026-02-11 21:28:03] total 938412
[2026-02-11 21:28:03] -rw-r--r-- 2 ek ek 677825535 Feb 11 20:04 ATLAS.root_0
[2026-02-11 21:28:03] -rw-r--r-- 2 ek ek    597951 Feb 11 20:04 input.tar.gz
[2026-02-11 21:28:03] -rw-r--r-- 2 ek ek     15845 Feb 11 20:04 start_atlas.sh
[2026-02-11 21:28:03] -rw------- 1 ek ek 281478502 Feb 11 21:27 HITS.pool.root.1
[2026-02-11 21:28:03] -rw------- 1 ek ek   1003520 Feb 11 21:28 result.tar.gz
21:28:05 (677307): run_atlas exited; CPU time 19020.905311
21:28:05 (677307): called boinc_finish(0)

</stderr_txt>
]]>

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