Stderr output

<core_client_version>8.2.6</core_client_version>
<![CDATA[
<stderr_txt>
22:50:34 (812560): wrapper (7.7.26015): starting
22:50:34 (812560): wrapper: running run_atlas (--nthreads 4)
[2026-02-11 22:50:34] Arguments: --nthreads 4
[2026-02-11 22:50:34] Threads: 4
[2026-02-11 22:50:34] Checking for CVMFS
[2026-02-11 22:50:34] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-11 22:50:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-11 22:50:34] Running cvmfs_config stat atlas.cern.ch
[2026-02-11 22:50:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-11 22:50:34] 2.13.3.0 639369 4632 47020 156128 2 50 25190813 33554433 0 130560 0 1745592 99.985 143244 197 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://127.0.0.1:25468 1
[2026-02-11 22:50:34] CVMFS is ok
[2026-02-11 22:50:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-11 22:50:34] Checking for apptainer binary...
[2026-02-11 22:50:34] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-11 22:50:34] Running /usr/bin/apptainer --version
[2026-02-11 22:50:34] apptainer version 1.4.5
[2026-02-11 22:50:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-11 22:50:34] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) Evangelos-Katikos
[2026-02-11 22:50:34] apptainer works
[2026-02-11 22:50:34] Set ATHENA_PROC_NUMBER=4
[2026-02-11 22:50:34] Set ATHENA_CORE_NUMBER=4
[2026-02-11 22:50:34] Starting ATLAS job with PandaID=7010005651
[2026-02-11 22:50:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/ek/BOINC/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-12 00:16:54]  *** The last 200 lines of the pilot log: ***
[2026-02-12 00:16:54]  filesize=306476
[2026-02-12 00:16:54]  filetype=log
[2026-02-12 00:16:54]  guid=690e10c4-e5b0-43b5-866f-dc128c4cd5ea
[2026-02-12 00:16:54]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-12 00:16:54]  is_altstaged=None
[2026-02-12 00:16:54]  is_tar=False
[2026-02-12 00:16:54]  lfn=log.48431096._022016.job.log.tgz.1
[2026-02-12 00:16:54]  mtime=0
[2026-02-12 00:16:54]  protocol_id=None
[2026-02-12 00:16:54]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-12 00:16:54]  replicas=None
[2026-02-12 00:16:54]  scope=mc23_13p6TeV
[2026-02-12 00:16:54]  status=None
[2026-02-12 00:16:54]  status_code=0
[2026-02-12 00:16:54]  storage_token=
[2026-02-12 00:16:54]  surl=/home/ek/BOINC/slots/0/PanDA_Pilot-7010005651/log.48431096._022016.job.log.tgz.1
[2026-02-12 00:16:54]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/73/35/log.48431096._022016.job.log.tgz.1
[2026-02-12 00:16:54]  workdir=None
[2026-02-12 00:16:54] ]
[2026-02-12 00:16:54] 2026-02-11 22:16:06,135 | INFO     | transferring file log.48431096._022016.job.log.tgz.1 from /home/ek/BOINC/slots/0/PanDA_Pilot-7010005651/log.48431096._022016.job.log.tgz.1 to /home/ek/BOINC/slots/
[2026-02-12 00:16:54] 2026-02-11 22:16:06,135 | INFO     | executing command: /usr/bin/env mv /home/ek/BOINC/slots/0/PanDA_Pilot-7010005651/log.48431096._022016.job.log.tgz.1 /home/ek/BOINC/slots/0/log.48431096._022016.job
[2026-02-12 00:16:54] 2026-02-11 22:16:06,143 | INFO     | adding to output.list: log.48431096._022016.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/73/35/log.48431096._022016.job.log.tg
[2026-02-12 00:16:54] 2026-02-11 22:16:06,144 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-12 00:16:54] 2026-02-11 22:16:06,144 | INFO     | summary of transferred files:
[2026-02-12 00:16:54] 2026-02-11 22:16:06,144 | INFO     |  -- lfn=log.48431096._022016.job.log.tgz.1, status_code=0, status=transferred
[2026-02-12 00:16:54] 2026-02-11 22:16:06,144 | INFO     | stage-out finished correctly
[2026-02-12 00:16:54] 2026-02-11 22:16:06,644 | INFO     | time since job start (5124s) is within the limit (349056.0s)
[2026-02-12 00:16:54] 2026-02-11 22:16:07,974 | INFO     | monitor loop #391: job 0:7010005651 is in state 'finished'
[2026-02-12 00:16:54] 2026-02-11 22:16:07,974 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-12 00:16:54] 2026-02-11 22:16:08,093 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-12 00:16:54] 2026-02-11 22:16:08,649 | INFO     | time since job start (5126s) is within the limit (349056.0s)
[2026-02-12 00:16:54] 2026-02-11 22:16:10,310 | INFO     | job 7010005651 has state=finished
[2026-02-12 00:16:54] 2026-02-11 22:16:10,310 | INFO     | preparing for final server update for job 7010005651 in state='finished'
[2026-02-12 00:16:54] 2026-02-11 22:16:10,311 | INFO     | reading metadata from: /home/ek/BOINC/slots/0/PanDA_Pilot-7010005651/jobReport.json
[2026-02-12 00:16:54] 2026-02-11 22:16:10,311 | INFO     | added worker_node to metadata from /home/ek/BOINC/slots/0/workernode_map.json
[2026-02-12 00:16:54] 2026-02-11 22:16:10,312 | INFO     | this job has now completed (state=finished)
[2026-02-12 00:16:54] 2026-02-11 22:16:10,312 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-12 00:16:54] 2026-02-11 22:16:10,312 | INFO     | log transfer has been attempted: DONE
[2026-02-12 00:16:54] 2026-02-11 22:16:10,312 | INFO     | job 7010005651 has finished - writing final server update
[2026-02-12 00:16:54] 2026-02-11 22:16:10,312 | INFO     | total number of processed events: 400 (read)
[2026-02-12 00:16:54] 2026-02-11 22:16:10,314 | INFO     | using path: /home/ek/BOINC/slots/0/PanDA_Pilot-7010005651/memory_monitor_summary.json (trf name=prmon)
[2026-02-12 00:16:54] 2026-02-11 22:16:10,314 | INFO     | extracted standard info from prmon json
[2026-02-12 00:16:54] 2026-02-11 22:16:10,314 | INFO     | extracted standard memory fields from prmon json
[2026-02-12 00:16:54] 2026-02-11 22:16:10,314 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-12 00:16:54] 2026-02-11 22:16:10,314 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-12 00:16:54] 2026-02-11 22:16:10,314 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-12 00:16:54] 2026-02-11 22:16:10,314 | INFO     | fitting pss+swap vs Time
[2026-02-12 00:16:54] 2026-02-11 22:16:10,315 | INFO     | sum of square deviations: 141553314.8831167
[2026-02-12 00:16:54] 2026-02-11 22:16:10,315 | INFO     | sum of deviations: -11864713818.883118
[2026-02-12 00:16:54] 2026-02-11 22:16:10,315 | INFO     | mean x: 1770845681.038961
[2026-02-12 00:16:54] 2026-02-11 22:16:10,315 | INFO     | mean y: 2517210.961038961
[2026-02-12 00:16:54] 2026-02-11 22:16:10,315 | INFO     | intersect: 148431236384.94354
[2026-02-12 00:16:54] 2026-02-11 22:16:10,315 | INFO     | chi2: 0.15635059049754674
[2026-02-12 00:16:54] 2026-02-11 22:16:10,315 | INFO     | current memory leak: -83.82 B/s (using 77 data points, chi2=0.16)
[2026-02-12 00:16:54] 2026-02-11 22:16:10,315 | INFO     | could have reported an average CPU frequency of 3947 MHz (6 samples)
[2026-02-12 00:16:54] 2026-02-11 22:16:10,315 | INFO     | ..............................
[2026-02-12 00:16:54] 2026-02-11 22:16:10,315 | INFO     | . Timing measurements:
[2026-02-12 00:16:54] 2026-02-11 22:16:10,315 | INFO     | . get job = 0 s
[2026-02-12 00:16:54] 2026-02-11 22:16:10,315 | INFO     | . initial setup = 3 s
[2026-02-12 00:16:54] 2026-02-11 22:16:10,315 | INFO     | . payload setup = 2 s
[2026-02-12 00:16:54] 2026-02-11 22:16:10,315 | INFO     | . stage-in = 0 s
[2026-02-12 00:16:54] 2026-02-11 22:16:10,315 | INFO     | . payload execution = 5105 s
[2026-02-12 00:16:54] 2026-02-11 22:16:10,315 | INFO     | . stage-out = 0 s
[2026-02-12 00:16:54] 2026-02-11 22:16:10,315 | INFO     | . log creation = 0 s
[2026-02-12 00:16:54] 2026-02-11 22:16:10,315 | INFO     | ..............................
[2026-02-12 00:16:54] 2026-02-11 22:16:10,341 | INFO     | 
[2026-02-12 00:16:54] 2026-02-11 22:16:10,342 | INFO     | job summary report
[2026-02-12 00:16:54] 2026-02-11 22:16:10,342 | INFO     | --------------------------------------------------
[2026-02-12 00:16:54] 2026-02-11 22:16:10,342 | INFO     | PanDA job id: 7010005651
[2026-02-12 00:16:54] 2026-02-11 22:16:10,342 | INFO     | task id: 48431096
[2026-02-12 00:16:54] 2026-02-11 22:16:10,342 | INFO     | errors: (none)
[2026-02-12 00:16:54] 2026-02-11 22:16:10,342 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-12 00:16:54] 2026-02-11 22:16:10,342 | INFO     | pilot state: finished 
[2026-02-12 00:16:54] 2026-02-11 22:16:10,342 | INFO     | transexitcode: 0
[2026-02-12 00:16:54] 2026-02-11 22:16:10,342 | INFO     | exeerrorcode: 0
[2026-02-12 00:16:54] 2026-02-11 22:16:10,342 | INFO     | exeerrordiag: 
[2026-02-12 00:16:54] 2026-02-11 22:16:10,342 | INFO     | exitcode: 0
[2026-02-12 00:16:54] 2026-02-11 22:16:10,342 | INFO     | exitmsg: OK
[2026-02-12 00:16:54] 2026-02-11 22:16:10,342 | INFO     | cpuconsumptiontime: 19485 s
[2026-02-12 00:16:54] 2026-02-11 22:16:10,342 | INFO     | nevents: 400
[2026-02-12 00:16:54] 2026-02-11 22:16:10,342 | INFO     | neventsw: 0
[2026-02-12 00:16:54] 2026-02-11 22:16:10,342 | INFO     | pid: 821273
[2026-02-12 00:16:54] 2026-02-11 22:16:10,342 | INFO     | pgrp: 821273
[2026-02-12 00:16:54] 2026-02-11 22:16:10,342 | INFO     | corecount: 4
[2026-02-12 00:16:54] 2026-02-11 22:16:10,342 | INFO     | event service: False
[2026-02-12 00:16:54] 2026-02-11 22:16:10,342 | INFO     | sizes: {0: 2282215, 10: 2282215, 5112: 2308681, 5113: 2317679, 5115: 2317735, 5118: 2317929}
[2026-02-12 00:16:54] 2026-02-11 22:16:10,342 | INFO     | --------------------------------------------------
[2026-02-12 00:16:54] 2026-02-11 22:16:10,342 | INFO     | 
[2026-02-12 00:16:54] 2026-02-11 22:16:10,342 | INFO     | executing command: ls -lF /home/ek/BOINC/slots/0
[2026-02-12 00:16:54] 2026-02-11 22:16:10,350 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-12 00:16:54] 2026-02-11 22:16:10,350 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-12 00:16:54] 2026-02-11 22:16:10,350 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-12 00:16:54] 2026-02-11 22:16:10,350 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-12 00:16:54] 2026-02-11 22:16:10,350 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-12 00:16:54] 2026-02-11 22:16:10,350 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-12 00:16:54] 2026-02-11 22:16:10,350 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-12 00:16:54] 2026-02-11 22:16:10,350 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-12 00:16:54] 2026-02-11 22:16:10,350 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-12 00:16:54] 2026-02-11 22:16:10,350 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-12 00:16:54] 2026-02-11 22:16:10,350 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-12 00:16:54] 2026-02-11 22:16:10,350 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-12 00:16:54] 2026-02-11 22:16:10,350 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-12 00:16:54] 2026-02-11 22:16:10,351 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-12 00:16:54] 2026-02-11 22:16:10,351 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-12 00:16:54] 2026-02-11 22:16:10,351 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-12 00:16:54] 2026-02-11 22:16:10,351 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-12 00:16:54] 2026-02-11 22:16:10,351 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-12 00:16:54] 2026-02-11 22:16:10,351 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-12 00:16:54] 2026-02-11 22:16:10,351 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-12 00:16:54] 2026-02-11 22:16:10,351 | INFO     | job 7010005651 has completed (purged errors)
[2026-02-12 00:16:54] 2026-02-11 22:16:10,351 | INFO     | overall cleanup function is called
[2026-02-12 00:16:54] 2026-02-11 22:16:11,358 | INFO     | --- collectZombieJob: --- 10, [821273]
[2026-02-12 00:16:54] 2026-02-11 22:16:11,358 | INFO     | zombie collector waiting for pid 821273
[2026-02-12 00:16:54] 2026-02-11 22:16:11,358 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-12 00:16:54] 2026-02-11 22:16:11,358 | INFO     | collected zombie processes
[2026-02-12 00:16:54] 2026-02-11 22:16:11,358 | INFO     | will attempt to kill all subprocesses of pid=821273
[2026-02-12 00:16:54] 2026-02-11 22:16:11,442 | INFO     | process IDs to be killed: [821273] (in reverse order)
[2026-02-12 00:16:54] 2026-02-11 22:16:11,470 | WARNING  | found no corresponding commands to process id(s)
[2026-02-12 00:16:54] 2026-02-11 22:16:11,471 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-12 00:16:54] 2026-02-11 22:16:11,473 | INFO     | did not find any defunct processes belonging to 821273
[2026-02-12 00:16:54] 2026-02-11 22:16:11,475 | INFO     | did not find any defunct processes belonging to 821273
[2026-02-12 00:16:54] 2026-02-11 22:16:11,475 | INFO     | ready for new job
[2026-02-12 00:16:54] 2026-02-11 22:16:11,475 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-12 00:16:54] 2026-02-11 22:16:11,476 | INFO     | **************************************
[2026-02-12 00:16:54] 2026-02-11 22:16:11,476 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-12 00:16:54] 2026-02-11 22:16:11,476 | INFO     | **************************************
[2026-02-12 00:16:54] 2026-02-11 22:16:11,476 | INFO     | 
[2026-02-12 00:16:54] 2026-02-11 22:16:11,477 | INFO     | architecture information:
[2026-02-12 00:16:54] 2026-02-11 22:16:11,477 | INFO     | executing command: cat /etc/os-release
[2026-02-12 00:16:54] 2026-02-11 22:16:11,482 | INFO     | cat /etc/os-release:
[2026-02-12 00:16:54] NAME="CentOS Linux"
[2026-02-12 00:16:54] VERSION="7 (Core)"
[2026-02-12 00:16:54] ID="centos"
[2026-02-12 00:16:54] ID_LIKE="rhel fedora"
[2026-02-12 00:16:54] VERSION_ID="7"
[2026-02-12 00:16:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-12 00:16:54] ANSI_COLOR="0;31"
[2026-02-12 00:16:54] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-12 00:16:54] HOME_URL="https://www.centos.org/"
[2026-02-12 00:16:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-12 00:16:54] 
[2026-02-12 00:16:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-12 00:16:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-12 00:16:54] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-12 00:16:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-12 00:16:54] 
[2026-02-12 00:16:54] 2026-02-11 22:16:11,482 | INFO     | **************************************
[2026-02-12 00:16:54] 2026-02-11 22:16:11,985 | INFO     | executing command: df -mP /home/ek/BOINC/slots/0
[2026-02-12 00:16:54] 2026-02-11 22:16:11,992 | INFO     | sufficient remaining disk space (60637052928 B)
[2026-02-12 00:16:54] 2026-02-11 22:16:11,992 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-12 00:16:54] 2026-02-11 22:16:11,992 | INFO     | current server update state: UPDATING_FINAL
[2026-02-12 00:16:54] 2026-02-11 22:16:11,992 | INFO     | update_server=False
[2026-02-12 00:16:54] 2026-02-11 22:16:11,992 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-12 00:16:54] 2026-02-11 22:16:11,992 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-12 00:16:54] 2026-02-11 22:16:11,992 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-12 00:16:54] 2026-02-11 22:16:11,992 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-12 00:16:54] 2026-02-11 22:16:11,993 | INFO     | aborting loop
[2026-02-12 00:16:54] 2026-02-11 22:16:12,363 | INFO     | all payload control threads have been joined
[2026-02-12 00:16:54] 2026-02-11 22:16:12,715 | INFO     | all data control threads have been joined
[2026-02-12 00:16:54] 2026-02-11 22:16:12,996 | INFO     | [job] queue monitor thread has finished
[2026-02-12 00:16:54] 2026-02-11 22:16:12,997 | INFO     | [job] retrieve thread has finished
[2026-02-12 00:16:54] 2026-02-11 22:16:12,998 | INFO     | [job] job monitor thread has finished
[2026-02-12 00:16:54] 2026-02-11 22:16:13,254 | INFO     | [payload] failed_post thread has finished
[2026-02-12 00:16:54] 2026-02-11 22:16:13,368 | INFO     | [payload] control thread has finished
[2026-02-12 00:16:54] 2026-02-11 22:16:13,461 | INFO     | all job control threads have been joined
[2026-02-12 00:16:54] 2026-02-11 22:16:13,720 | INFO     | [data] control thread has finished
[2026-02-12 00:16:54] 2026-02-11 22:16:13,723 | INFO     | [job] create_data_payload thread has finished
[2026-02-12 00:16:54] 2026-02-11 22:16:13,733 | INFO     | [job] validate thread has finished
[2026-02-12 00:16:54] 2026-02-11 22:16:13,747 | INFO     | [payload] validate_pre thread has finished
[2026-02-12 00:16:54] 2026-02-11 22:16:13,755 | INFO     | [payload] validate_post thread has finished
[2026-02-12 00:16:54] 2026-02-11 22:16:13,899 | INFO     | [data] copytool_in thread has finished
[2026-02-12 00:16:54] 2026-02-11 22:16:13,998 | INFO     | [data] copytool_out thread has finished
[2026-02-12 00:16:54] 2026-02-11 22:16:14,125 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-12 00:16:54] 2026-02-11 22:16:14,208 | INFO     | [payload] execute_payloads thread has finished
[2026-02-12 00:16:54] 2026-02-11 22:16:14,465 | INFO     | [job] control thread has finished
[2026-02-12 00:16:54] 2026-02-11 22:16:18,131 | INFO     | [data] queue_monitor thread has finished
[2026-02-12 00:16:54] 2026-02-11 22:16:22,748 | INFO     | job.realtimelogging is not enabled
[2026-02-12 00:16:54] 2026-02-11 22:16:23,753 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-12 00:16:54] 2026-02-11 22:16:41,803 | INFO     | PID=816399 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-12 00:16:54] 2026-02-11 22:16:41,804 | INFO     | found 0 job(s) in 20 queues
[2026-02-12 00:16:54] 2026-02-11 22:16:41,804 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-12 00:16:54] 2026-02-11 22:16:41,804 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-12 00:16:54] 2026-02-11 22:16:48,961 | INFO     | [monitor] cgroup control has ended
[2026-02-12 00:16:54] 2026-02-11 22:16:49,181 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140442746959680)>', '<ExcThread(monitor, started 140442125457152)>']
[2026-02-12 00:16:54] 2026-02-11 22:16:49,839 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-12 00:16:54] 2026-02-11 22:16:49,839 | INFO     | [monitor] control thread has ended
[2026-02-12 00:16:54] 2026-02-11 22:16:54,198 | INFO     | all workflow threads have been joined
[2026-02-12 00:16:54] 2026-02-11 22:16:54,198 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-12 00:16:54] 2026-02-11 22:16:54,198 | INFO     | traces error code: 0
[2026-02-12 00:16:54] 2026-02-11 22:16:54,198 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-12 00:16:54] 2026-02-11 22:16:54,240 [wrapper] ==== pilot stdout END ====
[2026-02-12 00:16:54] 2026-02-11 22:16:54,241 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-12 00:16:54] 2026-02-11 22:16:54,243 [wrapper] pilotpid: 816399
[2026-02-12 00:16:54] 2026-02-11 22:16:54,244 [wrapper] Pilot exit status: 0
[2026-02-12 00:16:54] 2026-02-11 22:16:54,249 [wrapper] pandaids: 7010005651
[2026-02-12 00:16:54] 2026-02-11 22:16:54,269 [wrapper] cleanup supervisor_pilot  876163 816400
[2026-02-12 00:16:54] 2026-02-11 22:16:54,271 [wrapper] Test setup, not cleaning
[2026-02-12 00:16:54] 2026-02-11 22:16:54,272 [wrapper] apfmon messages muted
[2026-02-12 00:16:54] 2026-02-11 22:16:54,273 [wrapper] ==== wrapper stdout END ====
[2026-02-12 00:16:54] 2026-02-11 22:16:54,275 [wrapper] ==== wrapper stderr END ====
[2026-02-12 00:16:54]  *** Error codes and diagnostics ***
[2026-02-12 00:16:54]     "exeErrorCode": 0,
[2026-02-12 00:16:54]     "exeErrorDiag": "",
[2026-02-12 00:16:54]     "pilotErrorCode": 0,
[2026-02-12 00:16:54]     "pilotErrorDiag": "",
[2026-02-12 00:16:54]  *** Listing of results directory ***
[2026-02-12 00:16:54] total 944504
[2026-02-12 00:16:54] -rwx------ 1 ek ek     36322 Feb 10 07:22 runpilot2-wrapper.sh
[2026-02-12 00:16:54] -rw-r--r-- 1 ek ek      5111 Feb 10 07:25 queuedata.json
[2026-02-12 00:16:54] -rw-r--r-- 1 ek ek    584627 Feb 10 07:25 pilot3.tar.gz
[2026-02-12 00:16:54] -rw-rw-r-- 1 ek ek       100 Feb 11 22:50 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-12 00:16:54] -rwxr-xr-x 1 ek ek      7986 Feb 11 22:50 run_atlas
[2026-02-12 00:16:54] -rw-rw-r-- 1 ek ek       105 Feb 11 22:50 job.xml
[2026-02-12 00:16:54] -rw-r--r-- 2 ek ek 682646235 Feb 11 22:50 EVNT.48431094._000484.pool.root.1
[2026-02-12 00:16:54] drwxrwx--x 2 ek ek      4096 Feb 11 22:50 shared
[2026-02-12 00:16:54] -rw-r--r-- 2 ek ek    597962 Feb 11 22:50 input.tar.gz
[2026-02-12 00:16:54] -rw-r--r-- 2 ek ek     15845 Feb 11 22:50 start_atlas.sh
[2026-02-12 00:16:54] -rw-rw-r-- 1 ek ek         0 Feb 11 22:50 boinc_setup_complete
[2026-02-12 00:16:54] -rw-rw-r-- 1 ek ek      9841 Feb 11 22:50 init_data.xml
[2026-02-12 00:16:54] -rw-rw-r-- 1 ek ek         0 Feb 11 22:50 boinc_lockfile
[2026-02-12 00:16:54] -rw-rw-r-- 1 ek ek      2556 Feb 11 22:50 pandaJob.out
[2026-02-12 00:16:54] -rw------- 1 ek ek        50 Feb 11 22:50 setup.sh.local
[2026-02-12 00:16:54] -rw------- 1 ek ek   1005065 Feb 11 22:50 agis_schedconf.cvmfs.json
[2026-02-12 00:16:54] -rw------- 1 ek ek   1512955 Feb 11 22:50 agis_ddmendpoints.agis.ALL.json
[2026-02-12 00:16:54] -rw------- 1 ek ek       432 Feb 11 22:50 workernode_map.json
[2026-02-12 00:16:54] drwx------ 5 ek ek      4096 Feb 11 22:50 pilot3
[2026-02-12 00:16:54] -rw-rw-r-- 1 ek ek       530 Feb 12 00:15 boinc_task_state.xml
[2026-02-12 00:16:54] -rw------- 1 ek ek 278483512 Feb 12 00:15 HITS.48431096._022016.pool.root.1
[2026-02-12 00:16:54] -rw------- 1 ek ek      1022 Feb 12 00:16 memory_monitor_summary.json
[2026-02-12 00:16:54] -rw------- 1 ek ek    306476 Feb 12 00:16 log.48431096._022016.job.log.tgz.1
[2026-02-12 00:16:54] -rw------- 1 ek ek      6320 Feb 12 00:16 heartbeat.json
[2026-02-12 00:16:54] -rw------- 1 ek ek        95 Feb 12 00:16 pilot_heartbeat.json
[2026-02-12 00:16:54] -rw-rw-r-- 1 ek ek      8192 Feb 12 00:16 boinc_mmap_file
[2026-02-12 00:16:54] -rw-rw-r-- 1 ek ek        27 Feb 12 00:16 wrapper_checkpoint.txt
[2026-02-12 00:16:54] -rw------- 1 ek ek      4815 Feb 12 00:16 pilotlog.txt
[2026-02-12 00:16:54] -rw------- 1 ek ek    744985 Feb 12 00:16 log.48431096._022016.job.log.1
[2026-02-12 00:16:54] -rw------- 1 ek ek       357 Feb 12 00:16 output.list
[2026-02-12 00:16:54] -rw-rw-r-- 1 ek ek       620 Feb 12 00:16 runtime_log
[2026-02-12 00:16:54] -rw------- 1 ek ek   1064960 Feb 12 00:16 result.tar.gz
[2026-02-12 00:16:54] -rw-rw-r-- 1 ek ek      9501 Feb 12 00:16 runtime_log.err
[2026-02-12 00:16:54] -rw------- 1 ek ek       661 Feb 12 00:16 fzwKDmaNv98n9Rq4apOajLDm4fhM0noT9bVooX4SDm7qgKDmQBGF0m.diag
[2026-02-12 00:16:54] -rw-rw-r-- 1 ek ek     21041 Feb 12 00:16 stderr.txt
[2026-02-12 00:16:54] HITS file was successfully produced:
[2026-02-12 00:16:54] -rw------- 1 ek ek 278483512 Feb 12 00:15 shared/HITS.pool.root.1
[2026-02-12 00:16:54]  *** Contents of shared directory: ***
[2026-02-12 00:16:54] total 940256
[2026-02-12 00:16:54] -rw-r--r-- 2 ek ek 682646235 Feb 11 22:50 ATLAS.root_0
[2026-02-12 00:16:54] -rw-r--r-- 2 ek ek    597962 Feb 11 22:50 input.tar.gz
[2026-02-12 00:16:54] -rw-r--r-- 2 ek ek     15845 Feb 11 22:50 start_atlas.sh
[2026-02-12 00:16:54] -rw------- 1 ek ek 278483512 Feb 12 00:15 HITS.pool.root.1
[2026-02-12 00:16:54] -rw------- 1 ek ek   1064960 Feb 12 00:16 result.tar.gz
00:16:55 (812560): run_atlas exited; CPU time 19527.903324
00:16:55 (812560): called boinc_finish(0)

</stderr_txt>
]]>

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