Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:47:37 (817423): wrapper (7.7.26015): starting
11:47:37 (817423): wrapper: running run_atlas (--nthreads 8)
[2026-02-10 11:47:37] Arguments: --nthreads 8
[2026-02-10 11:47:37] Threads: 8
[2026-02-10 11:47:37] Checking for CVMFS
[2026-02-10 11:47:38] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-10 11:47:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-10 11:47:39] Running cvmfs_config stat atlas.cern.ch
[2026-02-10 11:48:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-10 11:48:01] 2.13.3.0 8707 67846 383216 156089 3 433 23963370 39288832 19058 16776704 0 96273845 99.556 114910741 32577 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-10 11:48:01] CVMFS is ok
[2026-02-10 11:48:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-10 11:48:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-10 11:48:01] Further information can be found at the LHC@home message board.
[2026-02-10 11:48:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-10 11:48:01] Checking for apptainer binary...
[2026-02-10 11:48:01] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-10 11:48:01] Running /usr/bin/apptainer --version
[2026-02-10 11:48:02] apptainer version 1.4.5-2.el9
[2026-02-10 11:48:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-10 11:48:03] c-211-20.aglt2.org
[2026-02-10 11:48:03] apptainer works
[2026-02-10 11:48:03] Set ATHENA_PROC_NUMBER=8
[2026-02-10 11:48:03] Set ATHENA_CORE_NUMBER=8
[2026-02-10 11:48:03] Starting ATLAS job with PandaID=7007047173
[2026-02-10 11:48:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-10 20:59:35]  *** The last 200 lines of the pilot log: ***
[2026-02-10 20:59:35] 2026-02-11 01:58:35,110 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7007047173/memory_monitor_summary.json (trf name=prmon)
[2026-02-10 20:59:35] 2026-02-11 01:58:35,111 | INFO     | extracted standard info from prmon json
[2026-02-10 20:59:35] 2026-02-11 01:58:35,111 | INFO     | extracted standard memory fields from prmon json
[2026-02-10 20:59:35] 2026-02-11 01:58:35,111 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-10 20:59:35] 2026-02-11 01:58:35,116 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-10 20:59:35] 2026-02-11 01:58:35,116 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-10 20:59:35] 2026-02-11 01:58:35,146 | INFO     | fitting pss+swap vs Time
[2026-02-10 20:59:35] 2026-02-11 01:58:35,148 | INFO     | sum of square deviations: 48285986503.22104
[2026-02-10 20:59:35] 2026-02-11 01:58:35,197 | INFO     | sum of deviations: -520649890570.8327
[2026-02-10 20:59:35] 2026-02-11 01:58:35,197 | INFO     | mean x: 1770758713.5780668
[2026-02-10 20:59:35] 2026-02-11 01:58:35,198 | INFO     | mean y: 2686615.3531598514
[2026-02-10 20:59:35] 2026-02-11 01:58:35,198 | INFO     | intersect: 19096121320.063362
[2026-02-10 20:59:35] 2026-02-11 01:58:35,226 | INFO     | chi2: 4.96138774461542
[2026-02-10 20:59:35] 2026-02-11 01:58:35,227 | INFO     | sum of square deviations: 46952328950.030075
[2026-02-10 20:59:35] 2026-02-11 01:58:35,242 | INFO     | monitor loop #1859: job 0:7007047173 is in state 'finished'
[2026-02-10 20:59:35] 2026-02-11 01:58:35,243 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-10 20:59:35] 2026-02-11 01:58:35,255 | INFO     | sum of deviations: -473719816555.056
[2026-02-10 20:59:35] 2026-02-11 01:58:35,256 | INFO     | mean x: 1770758561.086304
[2026-02-10 20:59:35] 2026-02-11 01:58:35,256 | INFO     | mean y: 2691952.0881801127
[2026-02-10 20:59:35] 2026-02-11 01:58:35,256 | INFO     | intersect: 17868545243.707737
[2026-02-10 20:59:35] 2026-02-11 01:58:35,257 | INFO     | chi2: 4.289875314694102
[2026-02-10 20:59:35] 2026-02-11 01:58:35,261 | INFO     | current chi2=4.289875314694102 (change=13.534770199126415 %)
[2026-02-10 20:59:35] 2026-02-11 01:58:35,262 | INFO     | right removable region: 532
[2026-02-10 20:59:35] 2026-02-11 01:58:35,263 | INFO     | sum of square deviations: 46952040542.03005
[2026-02-10 20:59:35] 2026-02-11 01:58:35,302 | INFO     | sum of deviations: -680956122722.1876
[2026-02-10 20:59:35] 2026-02-11 01:58:35,302 | INFO     | mean x: 1770758866.086304
[2026-02-10 20:59:35] 2026-02-11 01:58:35,302 | INFO     | mean y: 2704920.960600375
[2026-02-10 20:59:35] 2026-02-11 01:58:35,303 | INFO     | intersect: 25684423496.03857
[2026-02-10 20:59:35] 2026-02-11 01:58:35,303 | INFO     | chi2: 1.9147171638115257
[2026-02-10 20:59:35] 2026-02-11 01:58:35,304 | INFO     | current chi2=1.9147171638115257 (change=61.40762902698821 %)
[2026-02-10 20:59:35] 2026-02-11 01:58:35,304 | INFO     | sum of square deviations: 45642885987.26549
[2026-02-10 20:59:35] 2026-02-11 01:58:35,336 | INFO     | sum of deviations: -732156838270.0902
[2026-02-10 20:59:35] 2026-02-11 01:58:35,336 | INFO     | mean x: 1770759018.594697
[2026-02-10 20:59:35] 2026-02-11 01:58:35,336 | INFO     | mean y: 2710875.6818181816
[2026-02-10 20:59:35] 2026-02-11 01:58:35,337 | INFO     | intersect: 28407429296.735683
[2026-02-10 20:59:35] 2026-02-11 01:58:35,337 | INFO     | chi2: 1.4278001503030384
[2026-02-10 20:59:35] 2026-02-11 01:58:35,338 | INFO     | current chi2=1.4278001503030384 (change=25.430231822814363 %)
[2026-02-10 20:59:35] 2026-02-11 01:58:35,342 | INFO     | sum of square deviations: 44358289666.42494
[2026-02-10 20:59:35] 2026-02-11 01:58:35,371 | INFO     | sum of deviations: -751510593955.3772
[2026-02-10 20:59:35] 2026-02-11 01:58:35,372 | INFO     | mean x: 1770759171.1032505
[2026-02-10 20:59:35] 2026-02-11 01:58:35,372 | INFO     | mean y: 2713168.692160612
[2026-02-10 20:59:35] 2026-02-11 01:58:35,372 | INFO     | intersect: 30002613670.60406
[2026-02-10 20:59:35] 2026-02-11 01:58:35,373 | INFO     | chi2: 1.2767321749252254
[2026-02-10 20:59:35] 2026-02-11 01:58:35,373 | INFO     | current chi2=1.2767321749252254 (change=10.580470617386483 %)
[2026-02-10 20:59:35] 2026-02-11 01:58:35,373 | INFO     | left removable region: 30
[2026-02-10 20:59:35] 2026-02-11 01:58:35,374 | INFO     | sum of square deviations: 39226490647.84277
[2026-02-10 20:59:35] 2026-02-11 01:58:35,420 | INFO     | sum of deviations: -716095262079.3591
[2026-02-10 20:59:35] 2026-02-11 01:58:35,420 | INFO     | mean x: 1770759445.623506
[2026-02-10 20:59:35] 2026-02-11 01:58:35,421 | INFO     | mean y: 2721129.521912351
[2026-02-10 20:59:35] 2026-02-11 01:58:35,421 | INFO     | intersect: 32328642422.789566
[2026-02-10 20:59:35] 2026-02-11 01:58:35,422 | INFO     | chi2: 0.372573730537325
[2026-02-10 20:59:35] 2026-02-11 01:58:35,422 | INFO     | current memory leak: -18.26 B/s (using 502 data points, chi2=0.37)
[2026-02-10 20:59:35] 2026-02-11 01:58:35,423 | INFO     | could have reported an average CPU frequency of 2900 MHz (22 samples)
[2026-02-10 20:59:35] 2026-02-11 01:58:35,480 | INFO     | ..............................
[2026-02-10 20:59:35] 2026-02-11 01:58:35,481 | INFO     | . Timing measurements:
[2026-02-10 20:59:35] 2026-02-11 01:58:35,481 | INFO     | . get job = 0 s
[2026-02-10 20:59:35] 2026-02-11 01:58:35,481 | INFO     | . initial setup = 49 s
[2026-02-10 20:59:35] 2026-02-11 01:58:35,481 | INFO     | . payload setup = 55 s
[2026-02-10 20:59:35] 2026-02-11 01:58:35,481 | INFO     | . stage-in = 0 s
[2026-02-10 20:59:35] 2026-02-11 01:58:35,482 | INFO     | . payload execution = 32805 s
[2026-02-10 20:59:35] 2026-02-11 01:58:35,482 | INFO     | . stage-out = 4 s
[2026-02-10 20:59:35] 2026-02-11 01:58:35,482 | INFO     | . log creation = 0 s
[2026-02-10 20:59:35] 2026-02-11 01:58:35,482 | INFO     | ..............................
[2026-02-10 20:59:35] 2026-02-11 01:58:36,761 | INFO     | 
[2026-02-10 20:59:35] 2026-02-11 01:58:36,761 | INFO     | job summary report
[2026-02-10 20:59:35] 2026-02-11 01:58:36,762 | INFO     | --------------------------------------------------
[2026-02-10 20:59:35] 2026-02-11 01:58:36,762 | INFO     | PanDA job id: 7007047173
[2026-02-10 20:59:35] 2026-02-11 01:58:36,762 | INFO     | task id: 48318042
[2026-02-10 20:59:35] 2026-02-11 01:58:36,762 | INFO     | errors: (none)
[2026-02-10 20:59:35] 2026-02-11 01:58:36,762 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-10 20:59:35] 2026-02-11 01:58:36,762 | INFO     | pilot state: finished 
[2026-02-10 20:59:35] 2026-02-11 01:58:36,763 | INFO     | transexitcode: 0
[2026-02-10 20:59:35] 2026-02-11 01:58:36,763 | INFO     | exeerrorcode: 0
[2026-02-10 20:59:35] 2026-02-11 01:58:36,763 | INFO     | exeerrordiag: 
[2026-02-10 20:59:35] 2026-02-11 01:58:36,763 | INFO     | exitcode: 0
[2026-02-10 20:59:35] 2026-02-11 01:58:36,763 | INFO     | exitmsg: OK
[2026-02-10 20:59:35] 2026-02-11 01:58:36,763 | INFO     | cpuconsumptiontime: 85155 s
[2026-02-10 20:59:35] 2026-02-11 01:58:36,763 | INFO     | nevents: 400
[2026-02-10 20:59:35] 2026-02-11 01:58:36,764 | INFO     | neventsw: 0
[2026-02-10 20:59:35] 2026-02-11 01:58:36,764 | INFO     | pid: 857295
[2026-02-10 20:59:35] 2026-02-11 01:58:36,764 | INFO     | pgrp: 857295
[2026-02-10 20:59:35] 2026-02-11 01:58:36,764 | INFO     | corecount: 8
[2026-02-10 20:59:35] 2026-02-11 01:58:36,768 | INFO     | event service: False
[2026-02-10 20:59:35] 2026-02-11 01:58:36,769 | INFO     | sizes: {0: 2281143, 1: 2281744, 2: 2281828, 3: 2281884, 4: 2281884, 5: 2282257, 6: 2282501, 17: 2282529, 32865: 2321128, 32871: 2330126, 32872: 2330182, 32876: 233
[2026-02-10 20:59:35] 2026-02-11 01:58:36,769 | INFO     | --------------------------------------------------
[2026-02-10 20:59:35] 2026-02-11 01:58:36,769 | INFO     | 
[2026-02-10 20:59:35] 2026-02-11 01:58:36,769 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-10 20:59:35] 2026-02-11 01:58:37,025 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-10 20:59:35] 2026-02-11 01:58:37,026 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-10 20:59:35] 2026-02-11 01:58:37,026 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-10 20:59:35] 2026-02-11 01:58:37,026 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-10 20:59:35] 2026-02-11 01:58:37,026 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-10 20:59:35] 2026-02-11 01:58:37,026 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-10 20:59:35] 2026-02-11 01:58:37,026 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-10 20:59:35] 2026-02-11 01:58:37,027 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-10 20:59:35] 2026-02-11 01:58:37,027 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-10 20:59:35] 2026-02-11 01:58:37,027 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-10 20:59:35] 2026-02-11 01:58:37,027 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-10 20:59:35] 2026-02-11 01:58:37,027 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-10 20:59:35] 2026-02-11 01:58:37,028 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-10 20:59:35] 2026-02-11 01:58:37,028 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-10 20:59:35] 2026-02-11 01:58:37,028 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-10 20:59:35] 2026-02-11 01:58:37,028 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-10 20:59:35] 2026-02-11 01:58:37,028 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-10 20:59:35] 2026-02-11 01:58:37,028 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-10 20:59:35] 2026-02-11 01:58:37,029 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-10 20:59:35] 2026-02-11 01:58:37,029 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-10 20:59:35] 2026-02-11 01:58:37,029 | INFO     | job 7007047173 has completed (purged errors)
[2026-02-10 20:59:35] 2026-02-11 01:58:37,029 | INFO     | overall cleanup function is called
[2026-02-10 20:59:35] 2026-02-11 01:58:37,381 | INFO     | PID=834358 has CPU usage=15.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-10 20:59:35] 2026-02-11 01:58:37,382 | INFO     | .. there are 25 such processes running
[2026-02-10 20:59:35] 2026-02-11 01:58:38,054 | INFO     | --- collectZombieJob: --- 10, [857295]
[2026-02-10 20:59:35] 2026-02-11 01:58:38,055 | INFO     | zombie collector waiting for pid 857295
[2026-02-10 20:59:35] 2026-02-11 01:58:38,055 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-10 20:59:35] 2026-02-11 01:58:38,055 | INFO     | collected zombie processes
[2026-02-10 20:59:35] 2026-02-11 01:58:38,055 | INFO     | will attempt to kill all subprocesses of pid=857295
[2026-02-10 20:59:35] 2026-02-11 01:58:39,227 | INFO     | process IDs to be killed: [857295] (in reverse order)
[2026-02-10 20:59:35] 2026-02-11 01:58:39,682 | WARNING  | found no corresponding commands to process id(s)
[2026-02-10 20:59:35] 2026-02-11 01:58:39,683 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-10 20:59:35] 2026-02-11 01:58:39,721 | INFO     | did not find any defunct processes belonging to 857295
[2026-02-10 20:59:35] 2026-02-11 01:58:39,764 | INFO     | did not find any defunct processes belonging to 857295
[2026-02-10 20:59:35] 2026-02-11 01:58:39,765 | INFO     | ready for new job
[2026-02-10 20:59:35] 2026-02-11 01:58:39,765 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-10 20:59:35] 2026-02-11 01:58:39,768 | INFO     | **************************************
[2026-02-10 20:59:35] 2026-02-11 01:58:39,768 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-10 20:59:35] 2026-02-11 01:58:39,773 | INFO     | **************************************
[2026-02-10 20:59:35] 2026-02-11 01:58:39,773 | INFO     | 
[2026-02-10 20:59:35] 2026-02-11 01:58:39,775 | INFO     | architecture information:
[2026-02-10 20:59:35] 2026-02-11 01:58:39,778 | INFO     | executing command: cat /etc/os-release
[2026-02-10 20:59:35] 2026-02-11 01:58:39,977 | INFO     | cat /etc/os-release:
[2026-02-10 20:59:35] NAME="CentOS Linux"
[2026-02-10 20:59:35] VERSION="7 (Core)"
[2026-02-10 20:59:35] ID="centos"
[2026-02-10 20:59:35] ID_LIKE="rhel fedora"
[2026-02-10 20:59:35] VERSION_ID="7"
[2026-02-10 20:59:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-10 20:59:35] ANSI_COLOR="0;31"
[2026-02-10 20:59:35] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-10 20:59:35] HOME_URL="https://www.centos.org/"
[2026-02-10 20:59:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-10 20:59:35] 
[2026-02-10 20:59:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-10 20:59:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-10 20:59:35] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-10 20:59:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-10 20:59:35] 
[2026-02-10 20:59:35] 2026-02-11 01:58:39,977 | INFO     | **************************************
[2026-02-10 20:59:35] 2026-02-11 01:58:40,482 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-10 20:59:35] 2026-02-11 01:58:40,677 | INFO     | sufficient remaining disk space (51482984448 B)
[2026-02-10 20:59:35] 2026-02-11 01:58:40,677 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-10 20:59:35] 2026-02-11 01:58:40,678 | INFO     | current server update state: UPDATING_FINAL
[2026-02-10 20:59:35] 2026-02-11 01:58:40,678 | INFO     | update_server=False
[2026-02-10 20:59:35] 2026-02-11 01:58:40,678 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-10 20:59:35] 2026-02-11 01:58:40,695 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-10 20:59:35] 2026-02-11 01:58:40,831 | INFO     | all job control threads have been joined
[2026-02-10 20:59:35] 2026-02-11 01:58:41,309 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-10 20:59:35] 2026-02-11 01:58:41,310 | INFO     | aborting loop
[2026-02-10 20:59:35] 2026-02-11 01:58:41,671 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-10 20:59:35] 2026-02-11 01:58:41,685 | INFO     | [job] retrieve thread has finished
[2026-02-10 20:59:35] 2026-02-11 01:58:41,785 | INFO     | [job] validate thread has finished
[2026-02-10 20:59:35] 2026-02-11 01:58:41,785 | INFO     | [payload] validate_pre thread has finished
[2026-02-10 20:59:35] 2026-02-11 01:58:41,800 | INFO     | all data control threads have been joined
[2026-02-10 20:59:35] 2026-02-11 01:58:41,837 | INFO     | [payload] validate_post thread has finished
[2026-02-10 20:59:35] 2026-02-11 01:58:41,837 | INFO     | [job] control thread has finished
[2026-02-10 20:59:35] 2026-02-11 01:58:41,943 | INFO     | all payload control threads have been joined
[2026-02-10 20:59:35] 2026-02-11 01:58:42,180 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-10 20:59:35] 2026-02-11 01:58:42,202 | INFO     | [payload] execute_payloads thread has finished
[2026-02-10 20:59:35] 2026-02-11 01:58:42,202 | INFO     | [data] copytool_in thread has finished
[2026-02-10 20:59:35] 2026-02-11 01:58:42,209 | INFO     | [job] create_data_payload thread has finished
[2026-02-10 20:59:35] 2026-02-11 01:58:42,316 | INFO     | [job] job monitor thread has finished
[2026-02-10 20:59:35] 2026-02-11 01:58:42,676 | INFO     | [job] queue monitor thread has finished
[2026-02-10 20:59:35] 2026-02-11 01:58:42,702 | INFO     | [data] copytool_out thread has finished
[2026-02-10 20:59:35] 2026-02-11 01:58:42,815 | INFO     | [data] control thread has finished
[2026-02-10 20:59:35] 2026-02-11 01:58:42,949 | INFO     | [payload] control thread has finished
[2026-02-10 20:59:35] 2026-02-11 01:58:43,134 | INFO     | [payload] failed_post thread has finished
[2026-02-10 20:59:35] 2026-02-11 01:58:43,417 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-10 20:59:35] 2026-02-11 01:58:47,446 | INFO     | [data] queue_monitor thread has finished
[2026-02-10 20:59:35] 2026-02-11 01:59:12,327 | INFO     | PID=834358 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-10 20:59:35] 2026-02-11 01:59:12,328 | INFO     | .. there are 25 such processes running
[2026-02-10 20:59:35] 2026-02-11 01:59:12,328 | INFO     | found 0 job(s) in 20 queues
[2026-02-10 20:59:35] 2026-02-11 01:59:12,329 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-10 20:59:35] 2026-02-11 01:59:12,329 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-10 20:59:35] 2026-02-11 01:59:24,137 | INFO     | [monitor] cgroup control has ended
[2026-02-10 20:59:35] 2026-02-11 01:59:25,925 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140131032868672)>', '<ExcThread(monitor, started 140130639648512)>']
[2026-02-10 20:59:35] 2026-02-11 01:59:26,486 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-10 20:59:35] 2026-02-11 01:59:26,487 | INFO     | [monitor] control thread has ended
[2026-02-10 20:59:35] 2026-02-11 01:59:30,951 | INFO     | all workflow threads have been joined
[2026-02-10 20:59:35] 2026-02-11 01:59:30,952 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-10 20:59:35] 2026-02-11 01:59:30,952 | INFO     | traces error code: 0
[2026-02-10 20:59:35] 2026-02-11 01:59:30,952 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-10 20:59:35] 2026-02-11 01:59:32,475 [wrapper] ==== pilot stdout END ====
[2026-02-10 20:59:35] 2026-02-11 01:59:32,582 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-10 20:59:35] 2026-02-11 01:59:32,632 [wrapper] pilotpid: 834358
[2026-02-10 20:59:35] 2026-02-11 01:59:32,731 [wrapper] Pilot exit status: 0
[2026-02-10 20:59:35] 2026-02-11 01:59:32,908 [wrapper] pandaids: 7007047173
[2026-02-10 20:59:35] 2026-02-11 01:59:34,421 [wrapper] cleanup supervisor_pilot 1035783 834359
[2026-02-10 20:59:35] 2026-02-11 01:59:34,460 [wrapper] Test setup, not cleaning
[2026-02-10 20:59:35] 2026-02-11 01:59:34,509 [wrapper] apfmon messages muted
[2026-02-10 20:59:35] 2026-02-11 01:59:34,590 [wrapper] ==== wrapper stdout END ====
[2026-02-10 20:59:35] 2026-02-11 01:59:34,640 [wrapper] ==== wrapper stderr END ====
[2026-02-10 20:59:35]  *** Error codes and diagnostics ***
[2026-02-10 20:59:35]     "exeErrorCode": 0,
[2026-02-10 20:59:35]     "exeErrorDiag": "",
[2026-02-10 20:59:35]     "pilotErrorCode": 0,
[2026-02-10 20:59:35]     "pilotErrorDiag": "",
[2026-02-10 20:59:35]  *** Listing of results directory ***
[2026-02-10 20:59:35] total 674712
[2026-02-10 20:59:35] -rw-r--r--. 1 boincer umatlas    584627 Feb  9 19:27 pilot3.tar.gz
[2026-02-10 20:59:35] -rwx------. 1 boincer umatlas     36322 Feb  9 19:29 runpilot2-wrapper.sh
[2026-02-10 20:59:35] -rw-r--r--. 1 boincer umatlas      5111 Feb  9 19:30 queuedata.json
[2026-02-10 20:59:35] -rw-r--r--. 1 boincer umatlas       100 Feb 10 11:47 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-10 20:59:35] -rwxr-xr-x. 1 boincer umatlas      7986 Feb 10 11:47 run_atlas
[2026-02-10 20:59:35] -rw-r--r--. 1 boincer umatlas       105 Feb 10 11:47 job.xml
[2026-02-10 20:59:35] -rw-r--r--. 2 boincer umatlas 494643384 Feb 10 11:47 EVNT.48318040._000265.pool.root.1
[2026-02-10 20:59:35] -rw-r--r--. 2 boincer umatlas     15845 Feb 10 11:47 start_atlas.sh
[2026-02-10 20:59:35] drwxrwx--x. 2 boincer umatlas      4096 Feb 10 11:47 shared
[2026-02-10 20:59:35] -rw-r--r--. 2 boincer umatlas    597964 Feb 10 11:47 input.tar.gz
[2026-02-10 20:59:35] -rw-r--r--. 1 boincer umatlas         0 Feb 10 11:47 boinc_lockfile
[2026-02-10 20:59:35] -rw-r--r--. 1 boincer umatlas      2537 Feb 10 11:48 pandaJob.out
[2026-02-10 20:59:35] -rw-------. 1 boincer umatlas        57 Feb 10 11:48 setup.sh.local
[2026-02-10 20:59:35] -rw-------. 1 boincer umatlas   1009534 Feb 10 11:49 agis_schedconf.cvmfs.json
[2026-02-10 20:59:35] -rw-------. 1 boincer umatlas       435 Feb 10 11:50 workernode_map.json
[2026-02-10 20:59:35] drwx------. 5 boincer umatlas      4096 Feb 10 11:50 pilot3
[2026-02-10 20:59:35] -rw-r--r--. 1 boincer umatlas      6524 Feb 10 20:55 init_data.xml
[2026-02-10 20:59:35] -rw-------. 1 boincer umatlas 183137348 Feb 10 20:57 HITS.48318042._013943.pool.root.1
[2026-02-10 20:59:35] -rw-r--r--. 1 boincer umatlas       532 Feb 10 20:57 boinc_task_state.xml
[2026-02-10 20:59:35] -rw-------. 1 boincer umatlas      1043 Feb 10 20:58 memory_monitor_summary.json
[2026-02-10 20:59:35] -rw-------. 1 boincer umatlas        95 Feb 10 20:58 pilot_heartbeat.json
[2026-02-10 20:59:35] -rw-------. 1 boincer umatlas   1512955 Feb 10 20:58 agis_ddmendpoints.agis.ALL.json
[2026-02-10 20:59:35] -rw-------. 1 boincer umatlas    675277 Feb 10 20:58 log.48318042._013943.job.log.tgz.1
[2026-02-10 20:59:35] -rw-------. 1 boincer umatlas      6390 Feb 10 20:58 heartbeat.json
[2026-02-10 20:59:35] -rw-r--r--. 1 boincer umatlas        28 Feb 10 20:59 wrapper_checkpoint.txt
[2026-02-10 20:59:35] -rw-r--r--. 1 boincer umatlas      8192 Feb 10 20:59 boinc_mmap_file
[2026-02-10 20:59:35] -rw-------. 1 boincer umatlas      4819 Feb 10 20:59 pilotlog.txt
[2026-02-10 20:59:35] -rw-------. 1 boincer umatlas   3918837 Feb 10 20:59 log.48318042._013943.job.log.1
[2026-02-10 20:59:35] -rw-------. 1 boincer umatlas       357 Feb 10 20:59 output.list
[2026-02-10 20:59:35] -rw-r--r--. 1 boincer umatlas       620 Feb 10 20:59 runtime_log
[2026-02-10 20:59:35] -rw-------. 1 boincer umatlas   4608000 Feb 10 20:59 result.tar.gz
[2026-02-10 20:59:35] -rw-r--r--. 1 boincer umatlas      9342 Feb 10 20:59 runtime_log.err
[2026-02-10 20:59:35] -rw-------. 1 boincer umatlas       658 Feb 10 20:59 ClcNDmVoq98n9Rq4apOajLDm4fhM0noT9bVooX4SDmJIgKDmrT2Yqn.diag
[2026-02-10 20:59:35] -rw-r--r--. 1 boincer umatlas     21064 Feb 10 20:59 stderr.txt
[2026-02-10 20:59:35] HITS file was successfully produced:
[2026-02-10 20:59:35] -rw-------. 1 boincer umatlas 183137348 Feb 10 20:57 shared/HITS.pool.root.1
[2026-02-10 20:59:35]  *** Contents of shared directory: ***
[2026-02-10 20:59:35] total 667004
[2026-02-10 20:59:35] -rw-r--r--. 2 boincer umatlas 494643384 Feb 10 11:47 ATLAS.root_0
[2026-02-10 20:59:35] -rw-r--r--. 2 boincer umatlas     15845 Feb 10 11:47 start_atlas.sh
[2026-02-10 20:59:35] -rw-r--r--. 2 boincer umatlas    597964 Feb 10 11:47 input.tar.gz
[2026-02-10 20:59:35] -rw-------. 1 boincer umatlas 183137348 Feb 10 20:57 HITS.pool.root.1
[2026-02-10 20:59:35] -rw-------. 1 boincer umatlas   4608000 Feb 10 20:59 result.tar.gz
20:59:37 (817423): run_atlas exited; CPU time 86800.393621
20:59:37 (817423): called boinc_finish(0)

</stderr_txt>
]]>

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