Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:09:05 (5872): wrapper (7.7.26015): starting
16:09:05 (5872): wrapper: running run_atlas (--nthreads 8)
[2026-02-10 16:09:05] Arguments: --nthreads 8
[2026-02-10 16:09:05] Threads: 8
[2026-02-10 16:09:05] Checking for CVMFS
[2026-02-10 16:09:05] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-10 16:09:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-10 16:09:06] Running cvmfs_config stat atlas.cern.ch
[2026-02-10 16:09:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-10 16:09:06] 2.11.2.0 14173 81655 136768 156085 0 261 21294966 25165825 4268 130560 0 27807199 99.803 19975485 3509 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-02-10 16:09:06] CVMFS is ok
[2026-02-10 16:09:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-10 16:09:06] Checking for apptainer binary...
[2026-02-10 16:09:06] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-10 16:09:06] Running /usr/bin/apptainer --version
[2026-02-10 16:09:06] apptainer version 1.3.2-1.el7
[2026-02-10 16:09:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-10 16:09:08] cg-vwn375.simple-grid.lan
[2026-02-10 16:09:08] apptainer works
[2026-02-10 16:09:08] Set ATHENA_PROC_NUMBER=8
[2026-02-10 16:09:08] Set ATHENA_CORE_NUMBER=8
[2026-02-10 16:09:08] Starting ATLAS job with PandaID=7003982773
[2026-02-10 16:09:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-10 20:14:15]  *** The last 200 lines of the pilot log: ***
[2026-02-10 20:14:15] 2026-02-10 19:13:25,227 | INFO     | preparing for final server update for job 7003982773 in state='finished'
[2026-02-10 20:14:15] 2026-02-10 19:13:25,227 | INFO     | reading metadata from: /var/lib/boinc/slots/9/PanDA_Pilot-7003982773/jobReport.json
[2026-02-10 20:14:15] 2026-02-10 19:13:25,230 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/9/workernode_map.json
[2026-02-10 20:14:15] 2026-02-10 19:13:25,231 | INFO     | this job has now completed (state=finished)
[2026-02-10 20:14:15] 2026-02-10 19:13:25,231 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-10 20:14:15] 2026-02-10 19:13:25,231 | INFO     | log transfer has been attempted: DONE
[2026-02-10 20:14:15] 2026-02-10 19:13:25,231 | INFO     | job 7003982773 has finished - writing final server update
[2026-02-10 20:14:15] 2026-02-10 19:13:25,231 | INFO     | total number of processed events: 400 (read)
[2026-02-10 20:14:15] 2026-02-10 19:13:25,233 | INFO     | using path: /var/lib/boinc/slots/9/PanDA_Pilot-7003982773/memory_monitor_summary.json (trf name=prmon)
[2026-02-10 20:14:15] 2026-02-10 19:13:25,234 | INFO     | extracted standard info from prmon json
[2026-02-10 20:14:15] 2026-02-10 19:13:25,234 | INFO     | extracted standard memory fields from prmon json
[2026-02-10 20:14:15] 2026-02-10 19:13:25,234 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-10 20:14:15] 2026-02-10 19:13:25,235 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-10 20:14:15] 2026-02-10 19:13:25,235 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-10 20:14:15] 2026-02-10 19:13:25,240 | INFO     | fitting pss+swap vs Time
[2026-02-10 20:14:15] 2026-02-10 19:13:25,241 | INFO     | sum of square deviations: 4233158440.0
[2026-02-10 20:14:15] 2026-02-10 19:13:25,243 | INFO     | sum of deviations: -35900474509.0
[2026-02-10 20:14:15] 2026-02-10 19:13:25,243 | INFO     | mean x: 1770743474.0
[2026-02-10 20:14:15] 2026-02-10 19:13:25,243 | INFO     | mean y: 2536718.259414226
[2026-02-10 20:14:15] 2026-02-10 19:13:25,243 | INFO     | intersect: 15019817987.399698
[2026-02-10 20:14:15] 2026-02-10 19:13:25,244 | INFO     | chi2: 1.8748353112555
[2026-02-10 20:14:15] 2026-02-10 19:13:25,244 | INFO     | sum of square deviations: 3972995422.5
[2026-02-10 20:14:15] 2026-02-10 19:13:25,246 | INFO     | sum of deviations: -34877856021.50001
[2026-02-10 20:14:15] 2026-02-10 19:13:25,246 | INFO     | mean x: 1770743321.5
[2026-02-10 20:14:15] 2026-02-10 19:13:25,246 | INFO     | mean y: 2537319.3547008545
[2026-02-10 20:14:15] 2026-02-10 19:13:25,246 | INFO     | intersect: 15547415692.118467
[2026-02-10 20:14:15] 2026-02-10 19:13:25,247 | INFO     | chi2: 1.8719839104507772
[2026-02-10 20:14:15] 2026-02-10 19:13:25,247 | INFO     | current chi2=1.8719839104507772 (change=0.15208806808814784 %)
[2026-02-10 20:14:15] 2026-02-10 19:13:25,247 | INFO     | right removable region: 233
[2026-02-10 20:14:15] 2026-02-10 19:13:25,248 | INFO     | sum of square deviations: 3972995422.5
[2026-02-10 20:14:15] 2026-02-10 19:13:25,249 | INFO     | sum of deviations: -75551596390.5
[2026-02-10 20:14:15] 2026-02-10 19:13:25,250 | INFO     | mean x: 1770743626.5
[2026-02-10 20:14:15] 2026-02-10 19:13:25,250 | INFO     | mean y: 2559756.9273504275
[2026-02-10 20:14:15] 2026-02-10 19:13:25,250 | INFO     | intersect: 33675517702.64678
[2026-02-10 20:14:15] 2026-02-10 19:13:25,250 | INFO     | chi2: 0.25371759730013266
[2026-02-10 20:14:15] 2026-02-10 19:13:25,250 | INFO     | current chi2=0.25371759730013266 (change=86.46720617128614 %)
[2026-02-10 20:14:15] 2026-02-10 19:13:25,251 | INFO     | sum of square deviations: 3723716330.0
[2026-02-10 20:14:15] 2026-02-10 19:13:25,253 | INFO     | sum of deviations: -72367925230.0
[2026-02-10 20:14:15] 2026-02-10 19:13:25,253 | INFO     | mean x: 1770743779.0
[2026-02-10 20:14:15] 2026-02-10 19:13:25,253 | INFO     | mean y: 2557784.2270742357
[2026-02-10 20:14:15] 2026-02-10 19:13:25,253 | INFO     | intersect: 34415773519.20752
[2026-02-10 20:14:15] 2026-02-10 19:13:25,254 | INFO     | chi2: 0.24247506615867268
[2026-02-10 20:14:15] 2026-02-10 19:13:25,254 | INFO     | current chi2=0.24247506615867268 (change=4.4311199779181045 %)
[2026-02-10 20:14:15] 2026-02-10 19:13:25,254 | INFO     | left removable region: 20
[2026-02-10 20:14:15] 2026-02-10 19:13:25,254 | INFO     | sum of square deviations: 2996454322.0
[2026-02-10 20:14:15] 2026-02-10 19:13:25,256 | INFO     | sum of deviations: -56686406411.0
[2026-02-10 20:14:15] 2026-02-10 19:13:25,256 | INFO     | mean x: 1770743901.0
[2026-02-10 20:14:15] 2026-02-10 19:13:25,256 | INFO     | mean y: 2549734.38028169
[2026-02-10 20:14:15] 2026-02-10 19:13:25,256 | INFO     | intersect: 33501177657.694763
[2026-02-10 20:14:15] 2026-02-10 19:13:25,260 | INFO     | chi2: 0.2278805456825755
[2026-02-10 20:14:15] 2026-02-10 19:13:25,260 | INFO     | current memory leak: -18.92 B/s (using 213 data points, chi2=0.23)
[2026-02-10 20:14:15] 2026-02-10 19:13:25,261 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2026-02-10 20:14:15] 2026-02-10 19:13:25,261 | INFO     | ..............................
[2026-02-10 20:14:15] 2026-02-10 19:13:25,261 | INFO     | . Timing measurements:
[2026-02-10 20:14:15] 2026-02-10 19:13:25,261 | INFO     | . get job = 0 s
[2026-02-10 20:14:15] 2026-02-10 19:13:25,261 | INFO     | . initial setup = 11 s
[2026-02-10 20:14:15] 2026-02-10 19:13:25,261 | INFO     | . payload setup = 12 s
[2026-02-10 20:14:15] 2026-02-10 19:13:25,261 | INFO     | . stage-in = 0 s
[2026-02-10 20:14:15] 2026-02-10 19:13:25,261 | INFO     | . payload execution = 14600 s
[2026-02-10 20:14:15] 2026-02-10 19:13:25,266 | INFO     | . stage-out = 3 s
[2026-02-10 20:14:15] 2026-02-10 19:13:25,266 | INFO     | . log creation = 1 s
[2026-02-10 20:14:15] 2026-02-10 19:13:25,266 | INFO     | ..............................
[2026-02-10 20:14:15] 2026-02-10 19:13:25,412 | INFO     | 
[2026-02-10 20:14:15] 2026-02-10 19:13:25,412 | INFO     | job summary report
[2026-02-10 20:14:15] 2026-02-10 19:13:25,412 | INFO     | --------------------------------------------------
[2026-02-10 20:14:15] 2026-02-10 19:13:25,412 | INFO     | PanDA job id: 7003982773
[2026-02-10 20:14:15] 2026-02-10 19:13:25,412 | INFO     | task id: 48318010
[2026-02-10 20:14:15] 2026-02-10 19:13:25,412 | INFO     | errors: (none)
[2026-02-10 20:14:15] 2026-02-10 19:13:25,413 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-10 20:14:15] 2026-02-10 19:13:25,413 | INFO     | pilot state: finished 
[2026-02-10 20:14:15] 2026-02-10 19:13:25,413 | INFO     | transexitcode: 0
[2026-02-10 20:14:15] 2026-02-10 19:13:25,413 | INFO     | exeerrorcode: 0
[2026-02-10 20:14:15] 2026-02-10 19:13:25,413 | INFO     | exeerrordiag: 
[2026-02-10 20:14:15] 2026-02-10 19:13:25,413 | INFO     | exitcode: 0
[2026-02-10 20:14:15] 2026-02-10 19:13:25,413 | INFO     | exitmsg: OK
[2026-02-10 20:14:15] 2026-02-10 19:13:25,413 | INFO     | cpuconsumptiontime: 57083 s
[2026-02-10 20:14:15] 2026-02-10 19:13:25,413 | INFO     | nevents: 400
[2026-02-10 20:14:15] 2026-02-10 19:13:25,414 | INFO     | neventsw: 0
[2026-02-10 20:14:15] 2026-02-10 19:13:25,414 | INFO     | pid: 14431
[2026-02-10 20:14:15] 2026-02-10 19:13:25,414 | INFO     | pgrp: 14431
[2026-02-10 20:14:15] 2026-02-10 19:13:25,414 | INFO     | corecount: 8
[2026-02-10 20:14:15] 2026-02-10 19:13:25,414 | INFO     | event service: False
[2026-02-10 20:14:15] 2026-02-10 19:13:25,414 | INFO     | sizes: {0: 2282161, 1: 2282249, 14616: 2312958, 14621: 2321956, 14623: 2322012, 14624: 2322206}
[2026-02-10 20:14:15] 2026-02-10 19:13:25,414 | INFO     | --------------------------------------------------
[2026-02-10 20:14:15] 2026-02-10 19:13:25,414 | INFO     | 
[2026-02-10 20:14:15] 2026-02-10 19:13:25,414 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2026-02-10 20:14:15] 2026-02-10 19:13:25,937 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-10 20:14:15] 2026-02-10 19:13:25,938 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-10 20:14:15] 2026-02-10 19:13:25,938 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-10 20:14:15] 2026-02-10 19:13:25,938 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-10 20:14:15] 2026-02-10 19:13:25,938 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-10 20:14:15] 2026-02-10 19:13:25,938 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-10 20:14:15] 2026-02-10 19:13:25,938 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-10 20:14:15] 2026-02-10 19:13:25,938 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-10 20:14:15] 2026-02-10 19:13:25,938 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-10 20:14:15] 2026-02-10 19:13:25,939 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-10 20:14:15] 2026-02-10 19:13:25,939 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-10 20:14:15] 2026-02-10 19:13:25,939 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-10 20:14:15] 2026-02-10 19:13:25,939 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-10 20:14:15] 2026-02-10 19:13:25,939 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-10 20:14:15] 2026-02-10 19:13:25,939 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-10 20:14:15] 2026-02-10 19:13:25,939 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-10 20:14:15] 2026-02-10 19:13:25,940 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-10 20:14:15] 2026-02-10 19:13:25,940 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-10 20:14:15] 2026-02-10 19:13:25,940 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-10 20:14:15] 2026-02-10 19:13:25,940 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-10 20:14:15] 2026-02-10 19:13:25,940 | INFO     | job 7003982773 has completed (purged errors)
[2026-02-10 20:14:15] 2026-02-10 19:13:25,940 | INFO     | overall cleanup function is called
[2026-02-10 20:14:15] 2026-02-10 19:13:26,949 | INFO     | --- collectZombieJob: --- 10, [14431]
[2026-02-10 20:14:15] 2026-02-10 19:13:26,949 | INFO     | zombie collector waiting for pid 14431
[2026-02-10 20:14:15] 2026-02-10 19:13:26,949 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-10 20:14:15] 2026-02-10 19:13:26,949 | INFO     | collected zombie processes
[2026-02-10 20:14:15] 2026-02-10 19:13:26,949 | INFO     | will attempt to kill all subprocesses of pid=14431
[2026-02-10 20:14:15] 2026-02-10 19:13:27,114 | INFO     | process IDs to be killed: [14431] (in reverse order)
[2026-02-10 20:14:15] 2026-02-10 19:13:27,907 | WARNING  | found no corresponding commands to process id(s)
[2026-02-10 20:14:15] 2026-02-10 19:13:27,908 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-10 20:14:15] 2026-02-10 19:13:27,911 | INFO     | did not find any defunct processes belonging to 14431
[2026-02-10 20:14:15] 2026-02-10 19:13:27,921 | INFO     | did not find any defunct processes belonging to 14431
[2026-02-10 20:14:15] 2026-02-10 19:13:27,921 | INFO     | ready for new job
[2026-02-10 20:14:15] 2026-02-10 19:13:27,921 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-10 20:14:15] 2026-02-10 19:13:27,924 | INFO     | **************************************
[2026-02-10 20:14:15] 2026-02-10 19:13:27,924 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-10 20:14:15] 2026-02-10 19:13:27,924 | INFO     | **************************************
[2026-02-10 20:14:15] 2026-02-10 19:13:27,924 | INFO     | 
[2026-02-10 20:14:15] 2026-02-10 19:13:27,925 | INFO     | pilot is running in a VM
[2026-02-10 20:14:15] 2026-02-10 19:13:27,925 | INFO     | architecture information:
[2026-02-10 20:14:15] 2026-02-10 19:13:27,935 | INFO     | executing command: cat /etc/os-release
[2026-02-10 20:14:15] 2026-02-10 19:13:28,122 | INFO     | cat /etc/os-release:
[2026-02-10 20:14:15] NAME="CentOS Linux"
[2026-02-10 20:14:15] VERSION="7 (Core)"
[2026-02-10 20:14:15] ID="centos"
[2026-02-10 20:14:15] ID_LIKE="rhel fedora"
[2026-02-10 20:14:15] VERSION_ID="7"
[2026-02-10 20:14:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-10 20:14:15] ANSI_COLOR="0;31"
[2026-02-10 20:14:15] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-10 20:14:15] HOME_URL="https://www.centos.org/"
[2026-02-10 20:14:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-10 20:14:15] 
[2026-02-10 20:14:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-10 20:14:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-10 20:14:15] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-10 20:14:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-10 20:14:15] 
[2026-02-10 20:14:15] 2026-02-10 19:13:28,123 | INFO     | **************************************
[2026-02-10 20:14:15] 2026-02-10 19:13:28,626 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2026-02-10 20:14:15] 2026-02-10 19:13:28,846 | INFO     | sufficient remaining disk space (495969107968 B)
[2026-02-10 20:14:15] 2026-02-10 19:13:28,847 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-10 20:14:15] 2026-02-10 19:13:28,847 | INFO     | current server update state: UPDATING_FINAL
[2026-02-10 20:14:15] 2026-02-10 19:13:28,847 | INFO     | update_server=False
[2026-02-10 20:14:15] 2026-02-10 19:13:28,847 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-10 20:14:15] 2026-02-10 19:13:29,021 | INFO     | all payload control threads have been joined
[2026-02-10 20:14:15] 2026-02-10 19:13:29,024 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-10 20:14:15] 2026-02-10 19:13:29,024 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-10 20:14:15] 2026-02-10 19:13:29,024 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-10 20:14:15] 2026-02-10 19:13:29,024 | INFO     | will abort loop
[2026-02-10 20:14:15] 2026-02-10 19:13:29,853 | INFO     | [job] retrieve thread has finished
[2026-02-10 20:14:15] 2026-02-10 19:13:29,905 | INFO     | all data control threads have been joined
[2026-02-10 20:14:15] 2026-02-10 19:13:29,966 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-10 20:14:15] 2026-02-10 19:13:29,973 | INFO     | [payload] failed_post thread has finished
[2026-02-10 20:14:15] 2026-02-10 19:13:29,978 | INFO     | [payload] validate_pre thread has finished
[2026-02-10 20:14:15] 2026-02-10 19:13:30,027 | INFO     | [payload] control thread has finished
[2026-02-10 20:14:15] 2026-02-10 19:13:30,030 | INFO     | [job] job monitor thread has finished
[2026-02-10 20:14:15] 2026-02-10 19:13:30,135 | INFO     | all job control threads have been joined
[2026-02-10 20:14:15] 2026-02-10 19:13:30,170 | INFO     | [job] validate thread has finished
[2026-02-10 20:14:15] 2026-02-10 19:13:30,198 | INFO     | [payload] execute_payloads thread has finished
[2026-02-10 20:14:15] 2026-02-10 19:13:30,348 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-10 20:14:15] 2026-02-10 19:13:30,427 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-10 20:14:15] 2026-02-10 19:13:30,778 | INFO     | [job] create_data_payload thread has finished
[2026-02-10 20:14:15] 2026-02-10 19:13:30,911 | INFO     | [data] control thread has finished
[2026-02-10 20:14:15] 2026-02-10 19:13:31,141 | INFO     | [job] control thread has finished
[2026-02-10 20:14:15] 2026-02-10 19:13:31,219 | INFO     | [payload] validate_post thread has finished
[2026-02-10 20:14:15] 2026-02-10 19:13:31,229 | INFO     | [data] copytool_in thread has finished
[2026-02-10 20:14:15] 2026-02-10 19:13:31,238 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-10 20:14:15] 2026-02-10 19:13:31,433 | INFO     | [job] queue monitor thread has finished
[2026-02-10 20:14:15] 2026-02-10 19:13:31,974 | INFO     | [data] copytool_out thread has finished
[2026-02-10 20:14:15] 2026-02-10 19:13:34,358 | INFO     | [data] queue_monitor thread has finished
[2026-02-10 20:14:15] 2026-02-10 19:13:57,434 | INFO     | PID=9947 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-02-10 20:14:15] 2026-02-10 19:13:57,434 | INFO     | .. there are 9 such processes running
[2026-02-10 20:14:15] 2026-02-10 19:13:57,435 | INFO     | found 0 job(s) in 20 queues
[2026-02-10 20:14:15] 2026-02-10 19:13:57,435 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-10 20:14:15] 2026-02-10 19:13:57,435 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-10 20:14:15] 2026-02-10 19:14:04,593 | INFO     | [monitor] cgroup control has ended
[2026-02-10 20:14:15] 2026-02-10 19:14:05,910 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140165816026944)>', '<ExcThread(monitor, started 140165217498880)>']
[2026-02-10 20:14:15] 2026-02-10 19:14:06,489 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-10 20:14:15] 2026-02-10 19:14:06,489 | INFO     | [monitor] control thread has ended
[2026-02-10 20:14:15] 2026-02-10 19:14:10,935 | INFO     | all workflow threads have been joined
[2026-02-10 20:14:15] 2026-02-10 19:14:10,935 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-10 20:14:15] 2026-02-10 19:14:10,935 | INFO     | traces error code: 0
[2026-02-10 20:14:15] 2026-02-10 19:14:10,935 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-10 20:14:15] 2026-02-10 19:14:11,142 [wrapper] ==== pilot stdout END ====
[2026-02-10 20:14:15] 2026-02-10 19:14:11,226 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-10 20:14:15] 2026-02-10 19:14:11,300 [wrapper] pilotpid: 9947
[2026-02-10 20:14:15] 2026-02-10 19:14:11,393 [wrapper] Pilot exit status: 0
[2026-02-10 20:14:15] 2026-02-10 19:14:11,790 [wrapper] pandaids: 7003982773
[2026-02-10 20:14:15] 2026-02-10 19:14:12,765 [wrapper] cleanup supervisor_pilot  5687 9948
[2026-02-10 20:14:15] 2026-02-10 19:14:12,874 [wrapper] Test setup, not cleaning
[2026-02-10 20:14:15] 2026-02-10 19:14:12,947 [wrapper] apfmon messages muted
[2026-02-10 20:14:15] 2026-02-10 19:14:13,023 [wrapper] ==== wrapper stdout END ====
[2026-02-10 20:14:15] 2026-02-10 19:14:13,129 [wrapper] ==== wrapper stderr END ====
[2026-02-10 20:14:15]  *** Error codes and diagnostics ***
[2026-02-10 20:14:15]     "exeErrorCode": 0,
[2026-02-10 20:14:15]     "exeErrorDiag": "",
[2026-02-10 20:14:15]     "pilotErrorCode": 0,
[2026-02-10 20:14:15]     "pilotErrorDiag": "",
[2026-02-10 20:14:15]  *** Listing of results directory ***
[2026-02-10 20:14:15] total 666828
[2026-02-10 20:14:15] -rw-r--r--. 1 boinc boinc    584627 Feb  8 06:10 pilot3.tar.gz
[2026-02-10 20:14:15] -rwx------. 1 boinc boinc     36322 Feb  8 06:11 runpilot2-wrapper.sh
[2026-02-10 20:14:15] -rw-r--r--. 1 boinc boinc      5111 Feb  8 06:12 queuedata.json
[2026-02-10 20:14:15] -rw-r--r--. 1 boinc boinc       100 Feb 10 16:09 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-10 20:14:15] -rwxr-xr-x. 1 boinc boinc      7986 Feb 10 16:09 run_atlas
[2026-02-10 20:14:15] -rw-r--r--. 1 boinc boinc       105 Feb 10 16:09 job.xml
[2026-02-10 20:14:15] -rw-r--r--. 1 boinc boinc      6391 Feb 10 16:09 init_data.xml
[2026-02-10 20:14:15] -rw-r--r--. 2 boinc boinc 493623156 Feb 10 16:09 EVNT.48318008._000143.pool.root.1
[2026-02-10 20:14:15] -rw-r--r--. 2 boinc boinc     15845 Feb 10 16:09 start_atlas.sh
[2026-02-10 20:14:15] drwxrwx--x. 2 boinc boinc        68 Feb 10 16:09 shared
[2026-02-10 20:14:15] -rw-r--r--. 2 boinc boinc    597967 Feb 10 16:09 input.tar.gz
[2026-02-10 20:14:15] -rw-r--r--. 1 boinc boinc         0 Feb 10 16:09 boinc_lockfile
[2026-02-10 20:14:15] -rw-r--r--. 1 boinc boinc      2526 Feb 10 16:09 pandaJob.out
[2026-02-10 20:14:15] -rw-------. 1 boinc boinc   1009464 Feb 10 16:09 agis_schedconf.cvmfs.json
[2026-02-10 20:14:15] -rw-------. 1 boinc boinc       415 Feb 10 16:09 workernode_map.json
[2026-02-10 20:14:15] drwx------. 5 boinc boinc      4096 Feb 10 16:09 pilot3
[2026-02-10 20:14:15] -rw-------. 1 boinc boinc 180214833 Feb 10 20:12 HITS.48318010._012633.pool.root.1
[2026-02-10 20:14:15] -rw-r--r--. 1 boinc boinc       532 Feb 10 20:12 boinc_task_state.xml
[2026-02-10 20:14:15] -rw-------. 1 boinc boinc      1016 Feb 10 20:13 memory_monitor_summary.json
[2026-02-10 20:14:15] -rw-------. 1 boinc boinc   1512955 Feb 10 20:13 agis_ddmendpoints.agis.ALL.json
[2026-02-10 20:14:15] -rw-------. 1 boinc boinc    501204 Feb 10 20:13 log.48318010._012633.job.log.tgz.1
[2026-02-10 20:14:15] -rw-------. 1 boinc boinc        95 Feb 10 20:13 pilot_heartbeat.json
[2026-02-10 20:14:15] -rw-------. 1 boinc boinc      6322 Feb 10 20:13 heartbeat.json
[2026-02-10 20:14:15] -rw-------. 1 boinc boinc      5065 Feb 10 20:14 pilotlog.txt
[2026-02-10 20:14:15] -rw-r--r--. 1 boinc boinc      8192 Feb 10 20:14 boinc_mmap_file
[2026-02-10 20:14:15] -rw-r--r--. 1 boinc boinc        28 Feb 10 20:14 wrapper_checkpoint.txt
[2026-02-10 20:14:15] -rw-------. 1 boinc boinc   2033334 Feb 10 20:14 log.48318010._012633.job.log.1
[2026-02-10 20:14:15] -rw-------. 1 boinc boinc       357 Feb 10 20:14 output.list
[2026-02-10 20:14:15] -rw-r--r--. 1 boinc boinc       620 Feb 10 20:14 runtime_log
[2026-02-10 20:14:15] -rw-------. 1 boinc boinc   2549760 Feb 10 20:14 result.tar.gz
[2026-02-10 20:14:15] -rw-r--r--. 1 boinc boinc      8816 Feb 10 20:14 runtime_log.err
[2026-02-10 20:14:15] -rw-------. 1 boinc boinc       655 Feb 10 20:14 9Y1MDmJGC98nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmKxcKDm1XuC5n.diag
[2026-02-10 20:14:15] -rw-r--r--. 1 boinc boinc     20903 Feb 10 20:14 stderr.txt
[2026-02-10 20:14:15] HITS file was successfully produced:
[2026-02-10 20:14:15] -rw-------. 1 boinc boinc 180214833 Feb 10 20:12 shared/HITS.pool.root.1
[2026-02-10 20:14:15]  *** Contents of shared directory: ***
[2026-02-10 20:14:15] total 661140
[2026-02-10 20:14:15] -rw-r--r--. 2 boinc boinc 493623156 Feb 10 16:09 ATLAS.root_0
[2026-02-10 20:14:15] -rw-r--r--. 2 boinc boinc     15845 Feb 10 16:09 start_atlas.sh
[2026-02-10 20:14:15] -rw-r--r--. 2 boinc boinc    597967 Feb 10 16:09 input.tar.gz
[2026-02-10 20:14:15] -rw-------. 1 boinc boinc 180214833 Feb 10 20:12 HITS.pool.root.1
[2026-02-10 20:14:15] -rw-------. 1 boinc boinc   2549760 Feb 10 20:14 result.tar.gz
20:14:17 (5872): run_atlas exited; CPU time 57294.319878
20:14:17 (5872): called boinc_finish(0)

</stderr_txt>
]]>

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