Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
19:14:55 (806878): wrapper (7.7.26015): starting
19:14:55 (806878): wrapper: running run_atlas (--nthreads 4)
[2026-02-10 19:14:55] Arguments: --nthreads 4
[2026-02-10 19:14:55] Threads: 4
[2026-02-10 19:14:55] Checking for CVMFS
[2026-02-10 19:14:55] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-10 19:14:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-10 19:14:56] Running cvmfs_config stat atlas.cern.ch
[2026-02-10 19:14:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-10 19:14:56] 2.9.2.0 3863091 6337 98268 156089 3 188 25682048 36864001 0 130560 0 3114037 99.986 211860 8334 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-10 19:14:56] CVMFS is ok
[2026-02-10 19:14:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-10 19:14:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-10 19:14:56] Further information can be found at the LHC@home message board.
[2026-02-10 19:14:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-10 19:14:56] Checking for apptainer binary...
[2026-02-10 19:14:56] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-10 19:14:56] Running /usr/bin/apptainer --version
[2026-02-10 19:14:56] apptainer version 1.4.1-1.1
[2026-02-10 19:14:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-10 19:14:56] thA325
[2026-02-10 19:14:56] apptainer works
[2026-02-10 19:14:56] Set ATHENA_PROC_NUMBER=4
[2026-02-10 19:14:56] Set ATHENA_CORE_NUMBER=4
[2026-02-10 19:14:56] Starting ATLAS job with PandaID=7007046240
[2026-02-10 19:14:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-10 20:19:18]  *** The last 200 lines of the pilot log: ***
[2026-02-10 20:19:18] 2026-02-10 19:18:22,058 | INFO     | maximum number of monitored processes: 6
[2026-02-10 20:19:18] 2026-02-10 19:18:22,058 | INFO     | aborting job monitoring since job object (job id=7007046240) has expired
[2026-02-10 20:19:18] 2026-02-10 19:18:22,058 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-10 20:19:18] 2026-02-10 19:18:22,058 | INFO     | will abort loop
[2026-02-10 20:19:18] 2026-02-10 19:18:22,135 | INFO     | [job] queue monitor thread has finished
[2026-02-10 20:19:18] 2026-02-10 19:18:22,135 | INFO     | [job] retrieve thread has finished
[2026-02-10 20:19:18] 2026-02-10 19:18:22,155 | INFO     | [job] control thread has finished
[2026-02-10 20:19:18] 2026-02-10 19:18:22,163 | INFO     | all data control threads have been joined
[2026-02-10 20:19:18] 2026-02-10 19:18:22,177 | INFO     | [payload] validate_pre thread has finished
[2026-02-10 20:19:18] 2026-02-10 19:18:22,318 | INFO     | [data] copytool_in thread has finished
[2026-02-10 20:19:18] 2026-02-10 19:18:22,389 | INFO     | [payload] validate_post thread has finished
[2026-02-10 20:19:18] 2026-02-10 19:18:22,443 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-10 20:19:18] 2026-02-10 19:18:22,629 | INFO     | [payload] control thread has finished
[2026-02-10 20:19:18] 2026-02-10 19:18:23,064 | INFO     | [job] job monitor thread has finished
[2026-02-10 20:19:18] 2026-02-10 19:18:23,086 | INFO     | [payload] execute_payloads thread has finished
[2026-02-10 20:19:18] 2026-02-10 19:18:23,169 | INFO     | [data] control thread has finished
[2026-02-10 20:19:18] 2026-02-10 19:18:23,228 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-10 20:19:18] 2026-02-10 19:18:23,453 | INFO     | [payload] failed_post thread has finished
[2026-02-10 20:19:18] 2026-02-10 19:18:23,486 | INFO     | [job] validate thread has finished
[2026-02-10 20:19:18] 2026-02-10 19:18:23,601 | INFO     | [job] create_data_payload thread has finished
[2026-02-10 20:19:18] 2026-02-10 19:18:24,449 | INFO     | [data] copytool_out thread has finished
[2026-02-10 20:19:18] 2026-02-10 19:18:27,234 | INFO     | [data] queue_monitor thread has finished
[2026-02-10 20:19:18] 2026-02-10 19:18:32,014 | INFO     | job.realtimelogging is not enabled
[2026-02-10 20:19:18] 2026-02-10 19:18:33,020 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-10 20:19:18] 2026-02-10 19:18:51,272 | INFO     | PID=810976 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-10 20:19:18] 2026-02-10 19:18:51,272 | INFO     | found 0 job(s) in 20 queues
[2026-02-10 20:19:18] 2026-02-10 19:18:51,272 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-10 20:19:18] 2026-02-10 19:18:51,272 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-10 20:19:18] 2026-02-10 19:19:12,048 | INFO     | [monitor] cgroup control has ended
[2026-02-10 20:19:18] 2026-02-10 19:19:13,697 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139899613300544)>', '<ExcThread(monitor, started 139898803701504)>']
[2026-02-10 20:19:18] 2026-02-10 19:19:14,395 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-10 20:19:18] 2026-02-10 19:19:14,396 | INFO     | [monitor] control thread has ended
[2026-02-10 20:19:18] 2026-02-10 19:19:18,723 | INFO     | all workflow threads have been joined
[2026-02-10 20:19:18] 2026-02-10 19:19:18,723 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-10 20:19:18] 2026-02-10 19:19:18,723 | INFO     | traces error code: 0
[2026-02-10 20:19:18] 2026-02-10 19:19:18,723 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-10 20:19:18] 2026-02-10 19:19:18,790 [wrapper] ==== pilot stdout END ====
[2026-02-10 20:19:18] 2026-02-10 19:19:18,794 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-10 20:19:18] 2026-02-10 19:19:18,797 [wrapper] pilotpid: 810976
[2026-02-10 20:19:18] 2026-02-10 19:19:18,801 [wrapper] Pilot exit status: 0
[2026-02-10 20:19:18] 2026-02-10 19:19:18,812 [wrapper] pandaids: 7007046240
[2026-02-10 20:19:18] 2026-02-10 19:19:18,832 [wrapper] cleanup supervisor_pilot  820491 810977
[2026-02-10 20:19:18] 2026-02-10 19:19:18,836 [wrapper] Test setup, not cleaning
[2026-02-10 20:19:18] 2026-02-10 19:19:18,839 [wrapper] apfmon messages muted
[2026-02-10 20:19:18] 2026-02-10 19:19:18,843 [wrapper] ==== wrapper stdout END ====
[2026-02-10 20:19:18] 2026-02-10 19:19:18,847 [wrapper] ==== wrapper stderr END ====
[2026-02-10 20:19:18]  *** Error codes and diagnostics ***
[2026-02-10 20:19:18]     "exeErrorCode": 0,
[2026-02-10 20:19:18]     "exeErrorDiag": "",
[2026-02-10 20:19:18]     "pilotErrorCode": 0,
[2026-02-10 20:19:18]     "pilotErrorDiag": "",
[2026-02-10 20:19:18]  *** Listing of results directory ***
[2026-02-10 20:19:18] total 662368
[2026-02-10 20:19:18] -rw-r--r-- 1 boinc boinc    584627 Feb 10 01:27 pilot3.tar.gz
[2026-02-10 20:19:18] -rwx------ 1 boinc boinc     36322 Feb 10 01:29 runpilot2-wrapper.sh
[2026-02-10 20:19:18] -rw-r--r-- 1 boinc boinc      5111 Feb 10 01:30 queuedata.json
[2026-02-10 20:19:18] -rw-r--r-- 1 boinc boinc       100 Feb 10 19:14 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-10 20:19:18] -rwxr-xr-x 1 boinc boinc      7986 Feb 10 19:14 run_atlas
[2026-02-10 20:19:18] -rw-r--r-- 1 boinc boinc       105 Feb 10 19:14 job.xml
[2026-02-10 20:19:18] -rw-r--r-- 2 boinc boinc 492915098 Feb 10 19:14 EVNT.48310747._000207.pool.root.1
[2026-02-10 20:19:18] -rw-r--r-- 2 boinc boinc    597954 Feb 10 19:14 input.tar.gz
[2026-02-10 20:19:18] -rw-r--r-- 2 boinc boinc     15845 Feb 10 19:14 start_atlas.sh
[2026-02-10 20:19:18] drwxrwx--x 2 boinc boinc      4096 Feb 10 19:14 shared
[2026-02-10 20:19:18] -rw-r--r-- 1 boinc boinc         0 Feb 10 19:14 boinc_setup_complete
[2026-02-10 20:19:18] -rw-r--r-- 1 boinc boinc      6369 Feb 10 19:14 init_data.xml
[2026-02-10 20:19:18] -rw-r--r-- 1 boinc boinc         0 Feb 10 19:14 boinc_lockfile
[2026-02-10 20:19:18] -rw-r--r-- 1 boinc boinc      2525 Feb 10 19:14 pandaJob.out
[2026-02-10 20:19:18] -rw------- 1 boinc boinc   1009534 Feb 10 19:15 agis_schedconf.cvmfs.json
[2026-02-10 20:19:18] -rw------- 1 boinc boinc   1512955 Feb 10 19:15 agis_ddmendpoints.agis.ALL.json
[2026-02-10 20:19:18] -rw------- 1 boinc boinc       419 Feb 10 19:15 workernode_map.json
[2026-02-10 20:19:18] drwx------ 5 boinc boinc      4096 Feb 10 19:15 pilot3
[2026-02-10 20:19:18] -rw-r--r-- 1 boinc boinc       530 Feb 10 20:17 boinc_task_state.xml
[2026-02-10 20:19:18] -rw------- 1 boinc boinc 179706736 Feb 10 20:17 HITS.48310749._010928.pool.root.1
[2026-02-10 20:19:18] -rw------- 1 boinc boinc      1021 Feb 10 20:18 memory_monitor_summary.json
[2026-02-10 20:19:18] -rw------- 1 boinc boinc    289154 Feb 10 20:18 log.48310749._010928.job.log.tgz.1
[2026-02-10 20:19:18] -rw------- 1 boinc boinc      6307 Feb 10 20:18 heartbeat.json
[2026-02-10 20:19:18] -rw------- 1 boinc boinc        95 Feb 10 20:18 pilot_heartbeat.json
[2026-02-10 20:19:18] -rw-r--r-- 1 boinc boinc      8192 Feb 10 20:18 boinc_mmap_file
[2026-02-10 20:19:18] -rw-r--r-- 1 boinc boinc        27 Feb 10 20:18 wrapper_checkpoint.txt
[2026-02-10 20:19:18] -rw------- 1 boinc boinc      5341 Feb 10 20:19 pilotlog.txt
[2026-02-10 20:19:18] -rw------- 1 boinc boinc    568931 Feb 10 20:19 log.48310749._010928.job.log.1
[2026-02-10 20:19:18] -rw------- 1 boinc boinc       357 Feb 10 20:19 output.list
[2026-02-10 20:19:18] -rw-r--r-- 1 boinc boinc       620 Feb 10 20:19 runtime_log
[2026-02-10 20:19:18] -rw------- 1 boinc boinc    880640 Feb 10 20:19 result.tar.gz
[2026-02-10 20:19:18] -rw-r--r-- 1 boinc boinc      8896 Feb 10 20:19 runtime_log.err
[2026-02-10 20:19:18] -rw------- 1 boinc boinc       657 Feb 10 20:19 HN2KDm6nq98nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmCwgKDm1gBSfm.diag
[2026-02-10 20:19:18] -rw-r--r-- 1 boinc boinc      7187 Feb 10 20:19 stderr.txt
[2026-02-10 20:19:18] HITS file was successfully produced:
[2026-02-10 20:19:18] -rw------- 1 boinc boinc 179706736 Feb 10 20:17 shared/HITS.pool.root.1
[2026-02-10 20:19:18]  *** Contents of shared directory: ***
[2026-02-10 20:19:18] total 658328
[2026-02-10 20:19:18] -rw-r--r-- 2 boinc boinc 492915098 Feb 10 19:14 ATLAS.root_0
[2026-02-10 20:19:18] -rw-r--r-- 2 boinc boinc    597954 Feb 10 19:14 input.tar.gz
[2026-02-10 20:19:18] -rw-r--r-- 2 boinc boinc     15845 Feb 10 19:14 start_atlas.sh
[2026-02-10 20:19:18] -rw------- 1 boinc boinc 179706736 Feb 10 20:17 HITS.pool.root.1
[2026-02-10 20:19:18] -rw------- 1 boinc boinc    880640 Feb 10 20:19 result.tar.gz
20:19:20 (806878): run_atlas exited; CPU time 14143.219880
20:19:20 (806878): called boinc_finish(0)

</stderr_txt>
]]>

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