Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:05:22 (1933945): wrapper (7.7.26015): starting
23:05:22 (1933945): wrapper: running run_atlas (--nthreads 8)
[2026-02-09 23:05:22] Arguments: --nthreads 8
[2026-02-09 23:05:22] Threads: 8
[2026-02-09 23:05:22] Checking for CVMFS
[2026-02-09 23:05:23] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-09 23:05:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-09 23:05:23] Running cvmfs_config stat atlas.cern.ch
[2026-02-09 23:05:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-09 23:05:24] 2.11.3.0 1215219 137501 142812 156079 3 294 26385990 45568001 19827 130560 0 785193294 99.808 467827653 21751 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-02-09 23:05:24] CVMFS is ok
[2026-02-09 23:05:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-09 23:05:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-09 23:05:24] Further information can be found at the LHC@home message board.
[2026-02-09 23:05:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-09 23:05:24] Checking for apptainer binary...
[2026-02-09 23:05:24] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-09 23:05:24] Running /usr/bin/apptainer --version
[2026-02-09 23:05:24] apptainer version 1.4.1-1.el9
[2026-02-09 23:05:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-09 23:05:24] wns0018.triumf.lcg
[2026-02-09 23:05:24] apptainer works
[2026-02-09 23:05:24] Set ATHENA_PROC_NUMBER=8
[2026-02-09 23:05:24] Set ATHENA_CORE_NUMBER=8
[2026-02-09 23:05:24] Starting ATLAS job with PandaID=7009901800
[2026-02-09 23:05:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-09 23:10:52]  *** The last 200 lines of the pilot log: ***
[2026-02-09 23:10:52] 2026-02-10 07:10:16,684 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-09 23:10:52] 2026-02-10 07:10:16,684 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-09 23:10:52] 2026-02-10 07:10:16,685 | WARNING  | wrong length of table data, x=[1770707247.0], y=[1772.0] (must be same and length>=4)
[2026-02-09 23:10:52] 2026-02-10 07:10:16,685 | INFO     | could have reported an average CPU frequency of 2094 MHz (4 samples)
[2026-02-09 23:10:52] 2026-02-10 07:10:16,685 | INFO     | ..............................
[2026-02-09 23:10:52] 2026-02-10 07:10:16,685 | INFO     | . Timing measurements:
[2026-02-09 23:10:52] 2026-02-10 07:10:16,685 | INFO     | . get job = 0 s
[2026-02-09 23:10:52] 2026-02-10 07:10:16,685 | INFO     | . initial setup = 29 s
[2026-02-09 23:10:52] 2026-02-10 07:10:16,685 | INFO     | . payload setup = 28 s
[2026-02-09 23:10:52] 2026-02-10 07:10:16,685 | INFO     | . stage-in = 0 s
[2026-02-09 23:10:52] 2026-02-10 07:10:16,685 | INFO     | . payload execution = 59 s
[2026-02-09 23:10:52] 2026-02-10 07:10:16,686 | INFO     | . stage-out = 1 s
[2026-02-09 23:10:52] 2026-02-10 07:10:16,686 | INFO     | . log creation = 0 s
[2026-02-09 23:10:52] 2026-02-10 07:10:16,686 | INFO     | ..............................
[2026-02-09 23:10:52] 2026-02-10 07:10:16,686 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-09 23:10:52] 2026-02-10 07:10:16,686 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7009901800/pilotlog.txt
[2026-02-09 23:10:52] 2026-02-10 07:10:16,754 | INFO     | time since job start (220s) is within the limit (349056.0s)
[2026-02-09 23:10:52] 2026-02-10 07:10:16,864 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-02-09 23:10:52] - Log from pilotlog.txt -
[2026-02-09 23:10:52] 2026-02-10 07:10:16,665 | INFO     | extracted standard info from prmon json
[2026-02-09 23:10:52] 2026-02-10 07:10:16,665 | INFO     | extracted standard memory fields from prmon json
[2026-02-09 23:10:52] 2026-02-10 07:10:16,665 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-09 23:10:52] 2026-02-10 07:10:16,684 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-09 23:10:52] 2026-02-10 07:10:16,684 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-09 23:10:52] 2026-02-10 07:10:16,685 | WARNING  | wrong length of table data, x=[1770707247.0], y=[1772.0] (must be same and length>=4)
[2026-02-09 23:10:52] 2026-02-10 07:10:16,685 | INFO     | could have reported an average CPU frequency of 2094 MHz (4 samples)
[2026-02-09 23:10:52] 2026-02-10 07:10:16,685 | INFO     | ..............................
[2026-02-09 23:10:52] 2026-02-10 07:10:16,685 | INFO     | . Timing measurements:
[2026-02-09 23:10:52] 2026-02-10 07:10:16,685 | INFO     | . get job = 0 s
[2026-02-09 23:10:52] 2026-02-10 07:10:16,685 | INFO     | . initial setup = 29 s
[2026-02-09 23:10:52] 2026-02-10 07:10:16,685 | INFO     | . payload setup = 28 s
[2026-02-09 23:10:52] 2026-02-10 07:10:16,685 | INFO     | . stage-in = 0 s
[2026-02-09 23:10:52] 2026-02-10 07:10:16,685 | INFO     | . payload execution = 59 s
[2026-02-09 23:10:52] 2026-02-10 07:10:16,686 | INFO     | . stage-out = 1 s
[2026-02-09 23:10:52] 2026-02-10 07:10:16,686 | INFO     | . log creation = 0 s
[2026-02-09 23:10:52] 2026-02-10 07:10:16,686 | INFO     | ..............................
[2026-02-09 23:10:52] 2026-02-10 07:10:16,686 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-09 23:10:52] 2026-02-10 07:10:16,686 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7009901800/pilotlog.txt
[2026-02-09 23:10:52] 2026-02-10 07:10:16,754 | INFO     | time since job start (220s) is within the limit (349056.0s)
[2026-02-09 23:10:52] 2026-02-10 07:10:16,864 | WARNING  | 
[2026-02-09 23:10:52] [begin log extracts]
[2026-02-09 23:10:52] - Log from pilotlog.txt -
[2026-02-09 23:10:52] 2026-02-10 07:10:16,665 | INFO     | extracted standard info from prmon json
[2026-02-09 23:10:52] 2026-02-10 07:10:16,665 | INFO     | extracted standard memory fields from prmon json
[2026-02-09 23:10:52] 2026-02-10 07:10:16,665 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-09 23:10:52] 2026-02-10 07:10:16,684 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-09 23:10:52] 2026-02-10 07:10:16,684 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-09 23:10:52] 2026-02-10 07:10:16,685 | WARNING  | wrong length of table data, x=[1770707247.0], y=[1772.0] (must be same and length>=4)
[2026-02-09 23:10:52] 2026-02-10 07:10:16,685 | INFO     | could have reported an average CPU frequency of 2094 MHz (4 samples)
[2026-02-09 23:10:52] 2026-02-10 07:10:16,685 | INFO     | ..............................
[2026-02-09 23:10:52] 2026-02-10 07:10:16,685 | INFO     | . Timing measurements:
[2026-02-09 23:10:52] 2026-02-10 07:10:16,685 | INFO     | . get job = 0 s
[2026-02-09 23:10:52] 2026-02-10 07:10:16,685 | INFO     | . initial setup = 29 s
[2026-02-09 23:10:52] 2026-02-10 07:10:16,685 | INFO     | . payload setup = 28 s
[2026-02-09 23:10:52] 2026-02-10 07:10:16,685 | INFO     | . stage-in = 0 s
[2026-02-09 23:10:52] 2026-02-10 07:10:16,685 | INFO     | . payload execution = 59 s
[2026-02-09 23:10:52] 2026-02-10 07:10:16,686 | INFO     | . stage-out = 1 s
[2026-02-09 23:10:52] 2026-02-10 07:10:16,686 | INFO     | . log creation = 0 s
[2026-02-09 23:10:52] 2026-02-10 07:10:16,686 | INFO     | ..............................
[2026-02-09 23:10:52] 2026-02-10 07:10:16,686 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-09 23:10:52] 2026-02-10 07:10:16,686 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7009901800/pilotlog.txt
[2026-02-09 23:10:52] 2026-02-10 07:10:16,754 | INFO     | time since job start (220s) is within the limit (349056.0s)
[2026-02-09 23:10:52] [end log extracts]
[2026-02-09 23:10:52] 2026-02-10 07:10:16,865 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-02-09 23:10:52] 2026-02-10 07:10:16,891 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-02-09 23:10:52] 2026-02-10 07:10:17,223 | INFO     | 
[2026-02-09 23:10:52] 2026-02-10 07:10:17,223 | INFO     | job summary report
[2026-02-09 23:10:52] 2026-02-10 07:10:17,223 | INFO     | --------------------------------------------------
[2026-02-09 23:10:52] 2026-02-10 07:10:17,223 | INFO     | PanDA job id: 7009901800
[2026-02-09 23:10:52] 2026-02-10 07:10:17,223 | INFO     | task id: 48431096
[2026-02-09 23:10:52] 2026-02-10 07:10:17,223 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-02-09 23:08:02,370 CRITICAL Transform executor raised TransformValidationExceptio
[2026-02-09 23:10:52] 2026-02-10 07:10:17,223 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-09 23:10:52] 2026-02-10 07:10:17,223 | INFO     | pilot state: failed 
[2026-02-09 23:10:52] 2026-02-10 07:10:17,224 | INFO     | transexitcode: 65
[2026-02-09 23:10:52] 2026-02-10 07:10:17,224 | INFO     | exeerrorcode: 65
[2026-02-09 23:10:52] 2026-02-10 07:10:17,224 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-02-09 23:10:52] 2026-02-10 07:10:17,224 | INFO     | exitcode: 65
[2026-02-09 23:10:52] 2026-02-10 07:10:17,224 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-02-09 23:10:52] 2026-02-10 07:10:17,224 | INFO     | cpuconsumptiontime: 14 s
[2026-02-09 23:10:52] 2026-02-10 07:10:17,224 | INFO     | nevents: 0
[2026-02-09 23:10:52] 2026-02-10 07:10:17,224 | INFO     | neventsw: 0
[2026-02-09 23:10:52] 2026-02-10 07:10:17,224 | INFO     | pid: 1942440
[2026-02-09 23:10:52] 2026-02-10 07:10:17,224 | INFO     | pgrp: 1942440
[2026-02-09 23:10:52] 2026-02-10 07:10:17,224 | INFO     | corecount: 8
[2026-02-09 23:10:52] 2026-02-10 07:10:17,224 | INFO     | event service: False
[2026-02-09 23:10:52] 2026-02-10 07:10:17,224 | INFO     | sizes: {0: 2281996, 1: 2282678, 2: 2282706, 3: 2283167, 92: 2306490, 93: 2306466, 94: 2310914, 98: 2310942, 217: 2311108}
[2026-02-09 23:10:52] 2026-02-10 07:10:17,224 | INFO     | --------------------------------------------------
[2026-02-09 23:10:52] 2026-02-10 07:10:17,224 | INFO     | 
[2026-02-09 23:10:52] 2026-02-10 07:10:17,225 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-02-09 23:10:52] 2026-02-10 07:10:17,255 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-09 23:10:52] 2026-02-10 07:10:17,255 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-09 23:10:52] 2026-02-10 07:10:17,255 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-09 23:10:52] 2026-02-10 07:10:17,255 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-09 23:10:52] 2026-02-10 07:10:17,255 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-09 23:10:52] 2026-02-10 07:10:17,255 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-09 23:10:52] 2026-02-10 07:10:17,255 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-09 23:10:52] 2026-02-10 07:10:17,256 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-09 23:10:52] 2026-02-10 07:10:17,256 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-09 23:10:52] 2026-02-10 07:10:17,256 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-09 23:10:52] 2026-02-10 07:10:17,256 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-09 23:10:52] 2026-02-10 07:10:17,256 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-09 23:10:52] 2026-02-10 07:10:17,256 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-09 23:10:52] 2026-02-10 07:10:17,256 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-09 23:10:52] 2026-02-10 07:10:17,256 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-09 23:10:52] 2026-02-10 07:10:17,256 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-09 23:10:52] 2026-02-10 07:10:17,256 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-09 23:10:52] 2026-02-10 07:10:17,256 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-09 23:10:52] 2026-02-10 07:10:17,256 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-09 23:10:52] 2026-02-10 07:10:17,256 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-09 23:10:52] 2026-02-10 07:10:17,257 | INFO     | job 7009901800 has completed (purged errors)
[2026-02-09 23:10:52] 2026-02-10 07:10:17,257 | INFO     | overall cleanup function is called
[2026-02-09 23:10:52] 2026-02-10 07:10:18,264 | INFO     | --- collectZombieJob: --- 10, [1942440]
[2026-02-09 23:10:52] 2026-02-10 07:10:18,286 | INFO     | zombie collector waiting for pid 1942440
[2026-02-09 23:10:52] 2026-02-10 07:10:18,286 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-09 23:10:52] 2026-02-10 07:10:18,286 | INFO     | collected zombie processes
[2026-02-09 23:10:52] 2026-02-10 07:10:18,286 | INFO     | will attempt to kill all subprocesses of pid=1942440
[2026-02-09 23:10:52] 2026-02-10 07:10:19,540 | INFO     | process IDs to be killed: [1942440] (in reverse order)
[2026-02-09 23:10:52] 2026-02-10 07:10:19,620 | WARNING  | found no corresponding commands to process id(s)
[2026-02-09 23:10:52] 2026-02-10 07:10:19,620 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-09 23:10:52] 2026-02-10 07:10:19,632 | INFO     | did not find any defunct processes belonging to 1942440
[2026-02-09 23:10:52] 2026-02-10 07:10:19,640 | INFO     | did not find any defunct processes belonging to 1942440
[2026-02-09 23:10:52] 2026-02-10 07:10:19,645 | INFO     | ready for new job
[2026-02-09 23:10:52] 2026-02-10 07:10:19,645 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-09 23:10:52] 2026-02-10 07:10:19,646 | INFO     | **************************************
[2026-02-09 23:10:52] 2026-02-10 07:10:19,647 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-09 23:10:52] 2026-02-10 07:10:19,647 | INFO     | **************************************
[2026-02-09 23:10:52] 2026-02-10 07:10:19,647 | INFO     | 
[2026-02-09 23:10:52] 2026-02-10 07:10:19,648 | INFO     | architecture information:
[2026-02-09 23:10:52] 2026-02-10 07:10:19,649 | INFO     | executing command: cat /etc/os-release
[2026-02-09 23:10:52] 2026-02-10 07:10:19,676 | INFO     | cat /etc/os-release:
[2026-02-09 23:10:52] NAME="CentOS Linux"
[2026-02-09 23:10:52] VERSION="7 (Core)"
[2026-02-09 23:10:52] ID="centos"
[2026-02-09 23:10:52] ID_LIKE="rhel fedora"
[2026-02-09 23:10:52] VERSION_ID="7"
[2026-02-09 23:10:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-09 23:10:52] ANSI_COLOR="0;31"
[2026-02-09 23:10:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-09 23:10:52] HOME_URL="https://www.centos.org/"
[2026-02-09 23:10:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-09 23:10:52] 
[2026-02-09 23:10:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-09 23:10:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-09 23:10:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-09 23:10:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-09 23:10:52] 
[2026-02-09 23:10:52] 2026-02-10 07:10:19,676 | INFO     | **************************************
[2026-02-09 23:10:52] 2026-02-10 07:10:20,180 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-02-09 23:10:52] 2026-02-10 07:10:20,294 | INFO     | sufficient remaining disk space (1318718537728 B)
[2026-02-09 23:10:52] 2026-02-10 07:10:20,295 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-09 23:10:52] 2026-02-10 07:10:20,295 | INFO     | current server update state: UPDATING_FINAL
[2026-02-09 23:10:52] 2026-02-10 07:10:20,295 | INFO     | update_server=False
[2026-02-09 23:10:52] 2026-02-10 07:10:20,295 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-09 23:10:52] 2026-02-10 07:10:20,295 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-09 23:10:52] 2026-02-10 07:10:20,295 | INFO     | aborting loop
[2026-02-09 23:10:52] 2026-02-10 07:10:20,488 | INFO     | all job control threads have been joined
[2026-02-09 23:10:52] 2026-02-10 07:10:20,582 | INFO     | all payload control threads have been joined
[2026-02-09 23:10:52] 2026-02-10 07:10:20,637 | INFO     | all data control threads have been joined
[2026-02-09 23:10:52] 2026-02-10 07:10:20,735 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-09 23:10:52] 2026-02-10 07:10:21,301 | INFO     | [job] retrieve thread has finished
[2026-02-09 23:10:52] 2026-02-10 07:10:21,302 | INFO     | [job] job monitor thread has finished
[2026-02-09 23:10:52] 2026-02-10 07:10:21,320 | INFO     | [job] validate thread has finished
[2026-02-09 23:10:52] 2026-02-10 07:10:21,494 | INFO     | [job] control thread has finished
[2026-02-09 23:10:52] 2026-02-10 07:10:21,582 | INFO     | [payload] validate_post thread has finished
[2026-02-09 23:10:52] 2026-02-10 07:10:21,595 | INFO     | [payload] control thread has finished
[2026-02-09 23:10:52] 2026-02-10 07:10:21,643 | INFO     | [data] control thread has finished
[2026-02-09 23:10:52] 2026-02-10 07:10:21,771 | INFO     | [data] copytool_in thread has finished
[2026-02-09 23:10:52] 2026-02-10 07:10:21,772 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-09 23:10:52] 2026-02-10 07:10:21,830 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-09 23:10:52] 2026-02-10 07:10:21,855 | INFO     | [payload] validate_pre thread has finished
[2026-02-09 23:10:52] 2026-02-10 07:10:21,931 | INFO     | [payload] execute_payloads thread has finished
[2026-02-09 23:10:52] 2026-02-10 07:10:22,227 | INFO     | [job] create_data_payload thread has finished
[2026-02-09 23:10:52] 2026-02-10 07:10:22,267 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-09 23:10:52] 2026-02-10 07:10:22,610 | INFO     | [payload] failed_post thread has finished
[2026-02-09 23:10:52] 2026-02-10 07:10:22,744 | INFO     | [data] copytool_out thread has finished
[2026-02-09 23:10:52] 2026-02-10 07:10:23,273 | INFO     | [job] queue monitor thread has finished
[2026-02-09 23:10:52] 2026-02-10 07:10:25,840 | INFO     | [data] queue_monitor thread has finished
[2026-02-09 23:10:52] 2026-02-10 07:10:36,074 | INFO     | [monitor] cgroup control has ended
[2026-02-09 23:10:52] 2026-02-10 07:10:36,761 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139764837922624)>', '<ExcThread(monitor, started 139764443363072)>']
[2026-02-09 23:10:52] 2026-02-10 07:10:41,787 | INFO     | all workflow threads have been joined
[2026-02-09 23:10:52] 2026-02-10 07:10:41,787 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-09 23:10:52] 2026-02-10 07:10:41,788 | INFO     | traces error code: 0
[2026-02-09 23:10:52] 2026-02-10 07:10:41,788 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-09 23:10:52] 2026-02-10 07:10:50,482 | INFO     | PID=1937728 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-09 23:10:52] 2026-02-10 07:10:50,482 | INFO     | .. there are 33 such processes running
[2026-02-09 23:10:52] 2026-02-10 07:10:50,483 | INFO     | found 0 job(s) in 20 queues
[2026-02-09 23:10:52] 2026-02-10 07:10:50,483 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-09 23:10:52] 2026-02-10 07:10:50,483 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-09 23:10:52] 2026-02-10 07:10:50,483 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-09 23:10:52] 2026-02-10 07:10:50,483 | INFO     | [monitor] control thread has ended
[2026-02-09 23:10:52] 2026-02-10 07:10:51,294 [wrapper] ==== pilot stdout END ====
[2026-02-09 23:10:52] 2026-02-10 07:10:51,310 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-09 23:10:52] 2026-02-10 07:10:51,332 [wrapper] pilotpid: 1937728
[2026-02-09 23:10:52] 2026-02-10 07:10:51,374 [wrapper] Pilot exit status: 0
[2026-02-09 23:10:52] 2026-02-10 07:10:51,456 [wrapper] pandaids: 7009901800
[2026-02-09 23:10:52] 2026-02-10 07:10:51,636 [wrapper] cleanup supervisor_pilot 1937735 1937729
[2026-02-09 23:10:52] 2026-02-10 07:10:51,667 [wrapper] Test setup, not cleaning
[2026-02-09 23:10:52] 2026-02-10 07:10:51,687 [wrapper] apfmon messages muted
[2026-02-09 23:10:52] 2026-02-10 07:10:51,695 [wrapper] ==== wrapper stdout END ====
[2026-02-09 23:10:52] 2026-02-10 07:10:51,696 [wrapper] ==== wrapper stderr END ====
[2026-02-09 23:10:52]  *** Error codes and diagnostics ***
[2026-02-09 23:10:52]     "exeErrorCode": 65,
[2026-02-09 23:10:52]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-02-09 23:10:52]     "pilotErrorCode": 1305,
[2026-02-09 23:10:52]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-02-09 23:10:52]  *** Listing of results directory ***
[2026-02-09 23:10:52] total 670796
[2026-02-09 23:10:52] -rw-r--r--. 1 boinc boinc      5111 Feb  9 20:15 queuedata.json
[2026-02-09 23:10:52] -rw-r--r--. 1 boinc boinc    584627 Feb  9 20:15 pilot3.tar.gz
[2026-02-09 23:10:52] -rwx------. 1 boinc boinc     36322 Feb  9 20:15 runpilot2-wrapper.sh
[2026-02-09 23:10:52] -rw-r--r--. 1 boinc boinc       100 Feb  9 23:05 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-09 23:10:52] -rwxr-xr-x. 1 boinc boinc      7986 Feb  9 23:05 run_atlas
[2026-02-09 23:10:52] -rw-r--r--. 1 boinc boinc       105 Feb  9 23:05 job.xml
[2026-02-09 23:10:52] -rw-r--r--. 1 boinc boinc      6444 Feb  9 23:05 init_data.xml
[2026-02-09 23:10:52] -rw-r--r--. 2 boinc boinc 682736640 Feb  9 23:05 EVNT.48431094._000472.pool.root.1
[2026-02-09 23:10:52] -rw-r--r--. 2 boinc boinc     15845 Feb  9 23:05 start_atlas.sh
[2026-02-09 23:10:52] drwxrwx--x. 2 boinc boinc      4096 Feb  9 23:05 shared
[2026-02-09 23:10:52] -rw-r--r--. 2 boinc boinc    597963 Feb  9 23:05 input.tar.gz
[2026-02-09 23:10:52] -rw-r--r--. 1 boinc boinc         0 Feb  9 23:05 boinc_lockfile
[2026-02-09 23:10:52] -rw-r--r--. 1 boinc boinc      2556 Feb  9 23:05 pandaJob.out
[2026-02-09 23:10:52] -rw-------. 1 boinc boinc   1009496 Feb  9 23:06 agis_schedconf.cvmfs.json
[2026-02-09 23:10:52] -rw-------. 1 boinc boinc   1513144 Feb  9 23:06 agis_ddmendpoints.agis.ALL.json
[2026-02-09 23:10:52] -rw-------. 1 boinc boinc       437 Feb  9 23:06 workernode_map.json
[2026-02-09 23:10:52] drwx------. 5 boinc boinc      4096 Feb  9 23:06 pilot3
[2026-02-09 23:10:52] -rw-r--r--. 1 boinc boinc       523 Feb  9 23:07 boinc_task_state.xml
[2026-02-09 23:10:52] -rw-------. 1 boinc boinc       958 Feb  9 23:08 memory_monitor_summary.json
[2026-02-09 23:10:52] -rw-------. 1 boinc boinc     22453 Feb  9 23:08 log.48431096._021368.job.log.tgz.1
[2026-02-09 23:10:52] -rw-------. 1 boinc boinc        95 Feb  9 23:10 pilot_heartbeat.json
[2026-02-09 23:10:52] -rw-------. 1 boinc boinc      7017 Feb  9 23:10 heartbeat.json
[2026-02-09 23:10:52] -rw-------. 1 boinc boinc       823 Feb  9 23:10 pilotlog.txt
[2026-02-09 23:10:52] -rw-r--r--. 1 boinc boinc      8192 Feb  9 23:10 boinc_mmap_file
[2026-02-09 23:10:52] -rw-------. 1 boinc boinc     88283 Feb  9 23:10 log.48431096._021368.job.log.1
[2026-02-09 23:10:52] -rw-r--r--. 1 boinc boinc        22 Feb  9 23:10 wrapper_checkpoint.txt
[2026-02-09 23:10:52] -rw-------. 1 boinc boinc       188 Feb  9 23:10 output.list
[2026-02-09 23:10:52] -rw-r--r--. 1 boinc boinc       620 Feb  9 23:10 runtime_log
[2026-02-09 23:10:52] -rw-------. 1 boinc boinc    133120 Feb  9 23:10 result.tar.gz
[2026-02-09 23:10:52] -rw-r--r--. 1 boinc boinc      8633 Feb  9 23:10 runtime_log.err
[2026-02-09 23:10:52] -rw-------. 1 boinc boinc       646 Feb  9 23:10 gZDLDmsKu98n9Rq4apOajLDm4fhM0noT9bVooX4SDmbZgKDmFMmLln.diag
[2026-02-09 23:10:52] -rw-r--r--. 1 boinc boinc     21738 Feb  9 23:10 stderr.txt
[2026-02-09 23:10:52] No HITS result produced
[2026-02-09 23:10:52]  *** Contents of shared directory: ***
[2026-02-09 23:10:52] total 667472
[2026-02-09 23:10:52] -rw-r--r--. 2 boinc boinc 682736640 Feb  9 23:05 ATLAS.root_0
[2026-02-09 23:10:52] -rw-r--r--. 2 boinc boinc     15845 Feb  9 23:05 start_atlas.sh
[2026-02-09 23:10:52] -rw-r--r--. 2 boinc boinc    597963 Feb  9 23:05 input.tar.gz
[2026-02-09 23:10:52] -rw-------. 1 boinc boinc    133120 Feb  9 23:10 result.tar.gz
23:10:53 (1933945): run_atlas exited; CPU time 23.917282
23:10:53 (1933945): called boinc_finish(0)

</stderr_txt>
]]>

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