Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:22:45 (2725868): wrapper (7.7.26015): starting
03:22:45 (2725868): wrapper: running run_atlas (--nthreads 8)
[2026-02-10 03:22:45] Arguments: --nthreads 8
[2026-02-10 03:22:45] Threads: 8
[2026-02-10 03:22:45] Checking for CVMFS
[2026-02-10 03:22:45] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-10 03:22:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-10 03:22:45] Running cvmfs_config stat atlas.cern.ch
[2026-02-10 03:22:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-10 03:22:46] 2.13.3.0 5451 66909 108460 156082 1 291 37846700 40960000 8779 16776704 0 96527049 99.680 94856451 31943 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-10 03:22:46] CVMFS is ok
[2026-02-10 03:22:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-10 03:22:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-10 03:22:46] Further information can be found at the LHC@home message board.
[2026-02-10 03:22:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-10 03:22:46] Checking for apptainer binary...
[2026-02-10 03:22:46] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-10 03:22:46] Running /usr/bin/apptainer --version
[2026-02-10 03:22:46] apptainer version 1.4.5-2.el9
[2026-02-10 03:22:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-10 03:22:46] c-211-7.aglt2.org
[2026-02-10 03:22:46] apptainer works
[2026-02-10 03:22:46] Set ATHENA_PROC_NUMBER=8
[2026-02-10 03:22:46] Set ATHENA_CORE_NUMBER=8
[2026-02-10 03:22:46] Starting ATLAS job with PandaID=7009881431
[2026-02-10 03:22:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-10 10:45:28]  *** The last 200 lines of the pilot log: ***
[2026-02-10 10:45:28] 2026-02-10 15:40:54,613 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/2/workernode_map.json
[2026-02-10 10:45:28] 2026-02-10 15:40:54,613 | INFO     | this job has now completed (state=finished)
[2026-02-10 10:45:28] 2026-02-10 15:40:54,613 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-10 10:45:28] 2026-02-10 15:40:54,614 | INFO     | log transfer has been attempted: DONE
[2026-02-10 10:45:28] 2026-02-10 15:40:54,614 | INFO     | job 7009881431 has finished - writing final server update
[2026-02-10 10:45:28] 2026-02-10 15:40:54,614 | INFO     | total number of processed events: 400 (read)
[2026-02-10 10:45:28] 2026-02-10 15:40:54,624 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-7009881431/memory_monitor_summary.json (trf name=prmon)
[2026-02-10 10:45:28] 2026-02-10 15:40:54,624 | INFO     | extracted standard info from prmon json
[2026-02-10 10:45:28] 2026-02-10 15:40:54,624 | INFO     | extracted standard memory fields from prmon json
[2026-02-10 10:45:28] 2026-02-10 15:40:54,625 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-10 10:45:28] 2026-02-10 15:40:54,625 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-10 10:45:28] 2026-02-10 15:40:54,625 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-10 10:45:28] 2026-02-10 15:40:54,633 | INFO     | fitting pss+swap vs Time
[2026-02-10 10:45:28] 2026-02-10 15:40:54,634 | INFO     | sum of square deviations: 24655302030.699924
[2026-02-10 10:45:28] 2026-02-10 15:40:54,639 | INFO     | sum of deviations: -48435700922.400024
[2026-02-10 10:45:28] 2026-02-10 15:40:54,640 | INFO     | mean x: 1770724935.1
[2026-02-10 10:45:28] 2026-02-10 15:40:54,640 | INFO     | mean y: 2603608.0790697676
[2026-02-10 10:45:28] 2026-02-10 15:40:54,640 | INFO     | intersect: 3481218603.975148
[2026-02-10 10:45:28] 2026-02-10 15:40:54,641 | INFO     | chi2: 3.068096360328218
[2026-02-10 10:45:28] 2026-02-10 15:40:54,642 | INFO     | sum of square deviations: 23805302311.59064
[2026-02-10 10:45:28] 2026-02-10 15:40:54,647 | INFO     | sum of deviations: -19828744584.571747
[2026-02-10 10:45:28] 2026-02-10 15:40:54,647 | INFO     | mean x: 1770724782.6047058
[2026-02-10 10:45:28] 2026-02-10 15:40:54,647 | INFO     | mean y: 2608693.585882353
[2026-02-10 10:45:28] 2026-02-10 15:40:54,647 | INFO     | intersect: 1477542680.3197796
[2026-02-10 10:45:28] 2026-02-10 15:40:54,648 | INFO     | chi2: 2.3886859246568197
[2026-02-10 10:45:28] 2026-02-10 15:40:54,648 | INFO     | current chi2=2.3886859246568197 (change=22.14436431842436 %)
[2026-02-10 10:45:28] 2026-02-10 15:40:54,648 | INFO     | right removable region: 424
[2026-02-10 10:45:28] 2026-02-10 15:40:54,649 | INFO     | sum of square deviations: 23805117236.941135
[2026-02-10 10:45:28] 2026-02-10 15:40:54,655 | INFO     | sum of deviations: -135387454873.22356
[2026-02-10 10:45:28] 2026-02-10 15:40:54,655 | INFO     | mean x: 1770725087.6117647
[2026-02-10 10:45:28] 2026-02-10 15:40:54,655 | INFO     | mean y: 2619151.2047058824
[2026-02-10 10:45:28] 2026-02-10 15:40:54,655 | INFO     | intersect: 10073309436.228796
[2026-02-10 10:45:28] 2026-02-10 15:40:54,656 | INFO     | chi2: 1.2908136470646023
[2026-02-10 10:45:28] 2026-02-10 15:40:54,656 | INFO     | current chi2=1.2908136470646023 (change=57.92786485602708 %)
[2026-02-10 10:45:28] 2026-02-10 15:40:54,657 | INFO     | sum of square deviations: 22974674940.311974
[2026-02-10 10:45:28] 2026-02-10 15:40:54,662 | INFO     | sum of deviations: -155288434853.69522
[2026-02-10 10:45:28] 2026-02-10 15:40:54,662 | INFO     | mean x: 1770725240.1261904
[2026-02-10 10:45:28] 2026-02-10 15:40:54,662 | INFO     | mean y: 2622797.3904761905
[2026-02-10 10:45:28] 2026-02-10 15:40:54,663 | INFO     | intersect: 11971155619.269691
[2026-02-10 10:45:28] 2026-02-10 15:40:54,663 | INFO     | chi2: 1.178404411540747
[2026-02-10 10:45:28] 2026-02-10 15:40:54,663 | INFO     | current chi2=1.178404411540747 (change=8.708401540337098 %)
[2026-02-10 10:45:28] 2026-02-10 15:40:54,664 | INFO     | left removable region: 20
[2026-02-10 10:45:28] 2026-02-10 15:40:54,664 | INFO     | sum of square deviations: 20447678427.17569
[2026-02-10 10:45:28] 2026-02-10 15:40:54,669 | INFO     | sum of deviations: -110526631355.68819
[2026-02-10 10:45:28] 2026-02-10 15:40:54,669 | INFO     | mean x: 1770725362.1559405
[2026-02-10 10:45:28] 2026-02-10 15:40:54,670 | INFO     | mean y: 2625251.995049505
[2026-02-10 10:45:28] 2026-02-10 15:40:54,670 | INFO     | intersect: 9573995910.635128
[2026-02-10 10:45:28] 2026-02-10 15:40:54,670 | INFO     | chi2: 0.4520575413486012
[2026-02-10 10:45:28] 2026-02-10 15:40:54,671 | INFO     | current memory leak: -5.41 B/s (using 404 data points, chi2=0.45)
[2026-02-10 10:45:28] 2026-02-10 15:40:54,671 | INFO     | could have reported an average CPU frequency of 2619 MHz (18 samples)
[2026-02-10 10:45:28] 2026-02-10 15:40:54,672 | INFO     | ..............................
[2026-02-10 10:45:28] 2026-02-10 15:40:54,672 | INFO     | . Timing measurements:
[2026-02-10 10:45:28] 2026-02-10 15:40:54,672 | INFO     | . get job = 0 s
[2026-02-10 10:45:28] 2026-02-10 15:40:54,672 | INFO     | . initial setup = 12 s
[2026-02-10 10:45:28] 2026-02-10 15:40:54,672 | INFO     | . payload setup = 18 s
[2026-02-10 10:45:28] 2026-02-10 15:40:54,672 | INFO     | . stage-in = 0 s
[2026-02-10 10:45:28] 2026-02-10 15:40:54,673 | INFO     | . payload execution = 26211 s
[2026-02-10 10:45:28] 2026-02-10 15:40:54,673 | INFO     | . stage-out = 2 s
[2026-02-10 10:45:28] 2026-02-10 15:40:54,673 | INFO     | . log creation = 0 s
[2026-02-10 10:45:28] 2026-02-10 15:40:54,673 | INFO     | ..............................
[2026-02-10 10:45:28] 2026-02-10 15:40:54,781 | INFO     | 
[2026-02-10 10:45:28] 2026-02-10 15:40:54,781 | INFO     | job summary report
[2026-02-10 10:45:28] 2026-02-10 15:40:54,782 | INFO     | --------------------------------------------------
[2026-02-10 10:45:28] 2026-02-10 15:40:54,782 | INFO     | PanDA job id: 7009881431
[2026-02-10 10:45:28] 2026-02-10 15:40:54,782 | INFO     | task id: 48431096
[2026-02-10 10:45:28] 2026-02-10 15:40:54,782 | INFO     | errors: (none)
[2026-02-10 10:45:28] 2026-02-10 15:40:54,783 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-10 10:45:28] 2026-02-10 15:40:54,783 | INFO     | pilot state: finished 
[2026-02-10 10:45:28] 2026-02-10 15:40:54,783 | INFO     | transexitcode: 0
[2026-02-10 10:45:28] 2026-02-10 15:40:54,783 | INFO     | exeerrorcode: 0
[2026-02-10 10:45:28] 2026-02-10 15:40:54,783 | INFO     | exeerrordiag: 
[2026-02-10 10:45:28] 2026-02-10 15:40:54,784 | INFO     | exitcode: 0
[2026-02-10 10:45:28] 2026-02-10 15:40:54,784 | INFO     | exitmsg: OK
[2026-02-10 10:45:28] 2026-02-10 15:40:54,784 | INFO     | cpuconsumptiontime: 84566 s
[2026-02-10 10:45:28] 2026-02-10 15:40:54,784 | INFO     | nevents: 400
[2026-02-10 10:45:28] 2026-02-10 15:40:54,784 | INFO     | neventsw: 0
[2026-02-10 10:45:28] 2026-02-10 15:40:54,784 | INFO     | pid: 2736562
[2026-02-10 10:45:28] 2026-02-10 15:40:54,784 | INFO     | pgrp: 2736562
[2026-02-10 10:45:28] 2026-02-10 15:40:54,784 | INFO     | corecount: 8
[2026-02-10 10:45:28] 2026-02-10 15:40:54,785 | INFO     | event service: False
[2026-02-10 10:45:28] 2026-02-10 15:40:54,785 | INFO     | sizes: {0: 2282651, 1: 2283112, 12: 2283112, 26234: 2319439, 26236: 2327566, 26238: 2327622, 26241: 2327944}
[2026-02-10 10:45:28] 2026-02-10 15:40:54,785 | INFO     | --------------------------------------------------
[2026-02-10 10:45:28] 2026-02-10 15:40:54,785 | INFO     | 
[2026-02-10 10:45:28] 2026-02-10 15:40:54,785 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-02-10 10:45:28] 2026-02-10 15:40:54,803 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-10 10:45:28] 2026-02-10 15:40:54,804 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-10 10:45:28] 2026-02-10 15:40:54,804 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-10 10:45:28] 2026-02-10 15:40:54,804 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-10 10:45:28] 2026-02-10 15:40:54,804 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-10 10:45:28] 2026-02-10 15:40:54,804 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-10 10:45:28] 2026-02-10 15:40:54,804 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-10 10:45:28] 2026-02-10 15:40:54,804 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-10 10:45:28] 2026-02-10 15:40:54,805 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-10 10:45:28] 2026-02-10 15:40:54,805 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-10 10:45:28] 2026-02-10 15:40:54,805 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-10 10:45:28] 2026-02-10 15:40:54,805 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-10 10:45:28] 2026-02-10 15:40:54,806 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-10 10:45:28] 2026-02-10 15:40:54,806 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-10 10:45:28] 2026-02-10 15:40:54,807 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-10 10:45:28] 2026-02-10 15:40:54,807 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-10 10:45:28] 2026-02-10 15:40:54,808 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-10 10:45:28] 2026-02-10 15:40:54,808 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-10 10:45:28] 2026-02-10 15:40:54,808 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-10 10:45:28] 2026-02-10 15:40:54,808 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-10 10:45:28] 2026-02-10 15:40:54,809 | INFO     | job 7009881431 has completed (purged errors)
[2026-02-10 10:45:28] 2026-02-10 15:40:54,809 | INFO     | overall cleanup function is called
[2026-02-10 10:45:28] 2026-02-10 15:40:55,599 | INFO     | PID=2729609 has CPU usage=12.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-02-10 10:45:28] 2026-02-10 15:40:55,600 | INFO     | .. there are 8 such processes running
[2026-02-10 10:45:28] 2026-02-10 15:40:55,821 | INFO     | --- collectZombieJob: --- 10, [2736562]
[2026-02-10 10:45:28] 2026-02-10 15:40:55,821 | INFO     | zombie collector waiting for pid 2736562
[2026-02-10 10:45:28] 2026-02-10 15:40:55,821 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-10 10:45:28] 2026-02-10 15:40:55,821 | INFO     | collected zombie processes
[2026-02-10 10:45:28] 2026-02-10 15:40:55,821 | INFO     | will attempt to kill all subprocesses of pid=2736562
[2026-02-10 10:45:28] 2026-02-10 15:40:56,167 | INFO     | process IDs to be killed: [2736562] (in reverse order)
[2026-02-10 10:45:28] 2026-02-10 15:40:56,252 | WARNING  | found no corresponding commands to process id(s)
[2026-02-10 10:45:28] 2026-02-10 15:40:56,253 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-10 10:45:28] 2026-02-10 15:40:56,262 | INFO     | did not find any defunct processes belonging to 2736562
[2026-02-10 10:45:28] 2026-02-10 15:40:56,270 | INFO     | did not find any defunct processes belonging to 2736562
[2026-02-10 10:45:28] 2026-02-10 15:40:56,270 | INFO     | ready for new job
[2026-02-10 10:45:28] 2026-02-10 15:40:56,270 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-10 10:45:28] 2026-02-10 15:40:56,273 | INFO     | **************************************
[2026-02-10 10:45:28] 2026-02-10 15:40:56,273 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-10 10:45:28] 2026-02-10 15:40:56,273 | INFO     | **************************************
[2026-02-10 10:45:28] 2026-02-10 15:40:56,273 | INFO     | 
[2026-02-10 10:45:28] 2026-02-10 15:40:56,276 | INFO     | architecture information:
[2026-02-10 10:45:28] 2026-02-10 15:40:56,276 | INFO     | executing command: cat /etc/os-release
[2026-02-10 10:45:28] 2026-02-10 15:40:56,292 | INFO     | cat /etc/os-release:
[2026-02-10 10:45:28] NAME="CentOS Linux"
[2026-02-10 10:45:28] VERSION="7 (Core)"
[2026-02-10 10:45:28] ID="centos"
[2026-02-10 10:45:28] ID_LIKE="rhel fedora"
[2026-02-10 10:45:28] VERSION_ID="7"
[2026-02-10 10:45:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-10 10:45:28] ANSI_COLOR="0;31"
[2026-02-10 10:45:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-10 10:45:28] HOME_URL="https://www.centos.org/"
[2026-02-10 10:45:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-10 10:45:28] 
[2026-02-10 10:45:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-10 10:45:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-10 10:45:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-10 10:45:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-10 10:45:28] 
[2026-02-10 10:45:28] 2026-02-10 15:40:56,292 | INFO     | **************************************
[2026-02-10 10:45:28] 2026-02-10 15:40:56,796 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-02-10 10:45:28] 2026-02-10 15:40:56,837 | INFO     | sufficient remaining disk space (60793290752 B)
[2026-02-10 10:45:28] 2026-02-10 15:40:56,837 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-10 10:45:28] 2026-02-10 15:40:56,838 | INFO     | current server update state: UPDATING_FINAL
[2026-02-10 10:45:28] 2026-02-10 15:40:56,838 | INFO     | update_server=False
[2026-02-10 10:45:28] 2026-02-10 15:40:56,839 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-10 10:45:28] 2026-02-10 15:40:57,006 | INFO     | all payload control threads have been joined
[2026-02-10 10:45:28] 2026-02-10 15:40:57,085 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-10 10:45:28] 2026-02-10 15:40:57,085 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-10 10:45:28] 2026-02-10 15:40:57,085 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-10 10:45:28] 2026-02-10 15:40:57,085 | INFO     | will abort loop
[2026-02-10 10:45:28] 2026-02-10 15:40:57,712 | INFO     | all data control threads have been joined
[2026-02-10 10:45:28] 2026-02-10 15:40:57,846 | INFO     | [job] retrieve thread has finished
[2026-02-10 10:45:28] 2026-02-10 15:40:57,873 | INFO     | [job] validate thread has finished
[2026-02-10 10:45:28] 2026-02-10 15:40:57,900 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-10 10:45:28] 2026-02-10 15:40:58,011 | INFO     | [payload] control thread has finished
[2026-02-10 10:45:28] 2026-02-10 15:40:58,036 | INFO     | all job control threads have been joined
[2026-02-10 10:45:28] 2026-02-10 15:40:58,038 | INFO     | [data] copytool_in thread has finished
[2026-02-10 10:45:28] 2026-02-10 15:40:58,079 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-10 10:45:28] 2026-02-10 15:40:58,090 | INFO     | [job] job monitor thread has finished
[2026-02-10 10:45:28] 2026-02-10 15:40:58,101 | INFO     | [payload] validate_post thread has finished
[2026-02-10 10:45:28] 2026-02-10 15:40:58,404 | INFO     | [payload] validate_pre thread has finished
[2026-02-10 10:45:28] 2026-02-10 15:40:58,717 | INFO     | [data] control thread has finished
[2026-02-10 10:45:28] 2026-02-10 15:40:58,868 | INFO     | [payload] execute_payloads thread has finished
[2026-02-10 10:45:28] 2026-02-10 15:40:59,041 | INFO     | [job] control thread has finished
[2026-02-10 10:45:28] 2026-02-10 15:40:59,064 | INFO     | [job] create_data_payload thread has finished
[2026-02-10 10:45:28] 2026-02-10 15:40:59,159 | INFO     | [payload] failed_post thread has finished
[2026-02-10 10:45:28] 2026-02-10 15:40:59,796 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-10 10:45:28] 2026-02-10 15:40:59,907 | INFO     | [data] copytool_out thread has finished
[2026-02-10 10:45:28] 2026-02-10 15:41:00,801 | INFO     | [job] queue monitor thread has finished
[2026-02-10 10:45:28] 2026-02-10 15:41:02,088 | INFO     | [data] queue_monitor thread has finished
[2026-02-10 10:45:28] 2026-02-10 15:41:07,767 | INFO     | job.realtimelogging is not enabled
[2026-02-10 10:45:28] 2026-02-10 15:41:08,459 | INFO     | [monitor] cgroup control has ended
[2026-02-10 10:45:28] 2026-02-10 15:41:08,773 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-10 10:45:28] 2026-02-10 15:41:10,281 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140635978237760)>', '<ExcThread(monitor, started 140635696019200)>']
[2026-02-10 10:45:28] 2026-02-10 15:41:15,307 | INFO     | all workflow threads have been joined
[2026-02-10 10:45:28] 2026-02-10 15:41:15,307 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-10 10:45:28] 2026-02-10 15:41:15,307 | INFO     | traces error code: 0
[2026-02-10 10:45:28] 2026-02-10 15:41:15,308 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-10 10:45:28] 2026-02-10 15:41:28,168 | INFO     | PID=2729609 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-10 10:45:28] 2026-02-10 15:41:28,169 | INFO     | .. there are 8 such processes running
[2026-02-10 10:45:28] 2026-02-10 15:41:28,169 | INFO     | found 0 job(s) in 20 queues
[2026-02-10 10:45:28] 2026-02-10 15:41:28,169 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-10 10:45:28] 2026-02-10 15:41:28,169 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-10 10:45:28] 2026-02-10 15:41:28,169 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-10 10:45:28] 2026-02-10 15:41:28,169 | INFO     | [monitor] control thread has ended
[2026-02-10 10:45:28] 2026-02-10 15:41:28,426 [wrapper] ==== pilot stdout END ====
[2026-02-10 10:45:28] 2026-02-10 15:41:28,432 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-10 10:45:28] 2026-02-10 15:41:28,449 [wrapper] pilotpid: 2729609
[2026-02-10 10:45:28] 2026-02-10 15:41:28,452 [wrapper] Pilot exit status: 0
[2026-02-10 10:45:28] 2026-02-10 15:41:28,494 [wrapper] pandaids: 7009881431
[2026-02-10 10:45:28] 2026-02-10 15:41:28,612 [wrapper] cleanup supervisor_pilot 3353385 2729610
[2026-02-10 10:45:28] 2026-02-10 15:41:28,615 [wrapper] Test setup, not cleaning
[2026-02-10 10:45:28] 2026-02-10 15:41:28,620 [wrapper] apfmon messages muted
[2026-02-10 10:45:28] 2026-02-10 15:41:28,626 [wrapper] ==== wrapper stdout END ====
[2026-02-10 10:45:28] 2026-02-10 15:41:28,642 [wrapper] ==== wrapper stderr END ====
[2026-02-10 10:45:28]  *** Error codes and diagnostics ***
[2026-02-10 10:45:28]     "exeErrorCode": 0,
[2026-02-10 10:45:28]     "exeErrorDiag": "",
[2026-02-10 10:45:28]     "pilotErrorCode": 0,
[2026-02-10 10:45:28]     "pilotErrorDiag": "",
[2026-02-10 10:45:28]  *** Listing of results directory ***
[2026-02-10 10:45:28] total 948424
[2026-02-10 10:45:28] -rw-r--r--. 1 boincer umatlas      5111 Feb  9 23:15 queuedata.json
[2026-02-10 10:45:28] -rw-r--r--. 1 boincer umatlas    584627 Feb  9 23:15 pilot3.tar.gz
[2026-02-10 10:45:28] -rwx------. 1 boincer umatlas     36322 Feb  9 23:15 runpilot2-wrapper.sh
[2026-02-10 10:45:28] -rw-r--r--. 1 boincer umatlas       100 Feb 10 03:22 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-10 10:45:28] -rwxr-xr-x. 1 boincer umatlas      7986 Feb 10 03:22 run_atlas
[2026-02-10 10:45:28] -rw-r--r--. 1 boincer umatlas       105 Feb 10 03:22 job.xml
[2026-02-10 10:45:28] -rw-r--r--. 2 boincer umatlas 674758086 Feb 10 03:22 EVNT.48431094._000463.pool.root.1
[2026-02-10 10:45:28] -rw-r--r--. 2 boincer umatlas     15845 Feb 10 03:22 start_atlas.sh
[2026-02-10 10:45:28] drwxrwx--x. 2 boincer umatlas      4096 Feb 10 03:22 shared
[2026-02-10 10:45:28] -rw-r--r--. 2 boincer umatlas    597951 Feb 10 03:22 input.tar.gz
[2026-02-10 10:45:28] -rw-r--r--. 1 boincer umatlas         0 Feb 10 03:22 boinc_lockfile
[2026-02-10 10:45:28] -rw-r--r--. 1 boincer umatlas      2555 Feb 10 03:22 pandaJob.out
[2026-02-10 10:45:28] -rw-------. 1 boincer umatlas        57 Feb 10 03:22 setup.sh.local
[2026-02-10 10:45:28] -rw-------. 1 boincer umatlas   1009488 Feb 10 03:23 agis_schedconf.cvmfs.json
[2026-02-10 10:45:28] -rw-------. 1 boincer umatlas       440 Feb 10 03:23 workernode_map.json
[2026-02-10 10:45:28] drwx------. 5 boincer umatlas      4096 Feb 10 03:23 pilot3
[2026-02-10 10:45:28] -rw-r--r--. 1 boincer umatlas       531 Feb 10 10:39 boinc_task_state.xml
[2026-02-10 10:45:28] -rw-------. 1 boincer umatlas 284596745 Feb 10 10:39 HITS.48431096._020882.pool.root.1
[2026-02-10 10:45:28] -rw-------. 1 boincer umatlas        95 Feb 10 10:40 pilot_heartbeat.json
[2026-02-10 10:45:28] -rw-------. 1 boincer umatlas      1039 Feb 10 10:40 memory_monitor_summary.json
[2026-02-10 10:45:28] -rw-------. 1 boincer umatlas   1512955 Feb 10 10:40 agis_ddmendpoints.agis.ALL.json
[2026-02-10 10:45:28] -rw-------. 1 boincer umatlas    614162 Feb 10 10:40 log.48431096._020882.job.log.tgz.1
[2026-02-10 10:45:28] -rw-------. 1 boincer umatlas      6387 Feb 10 10:40 heartbeat.json
[2026-02-10 10:45:28] -rw-------. 1 boincer umatlas       822 Feb 10 10:41 pilotlog.txt
[2026-02-10 10:45:28] -rw-------. 1 boincer umatlas   3330981 Feb 10 10:41 log.48431096._020882.job.log.1
[2026-02-10 10:45:28] -rw-------. 1 boincer umatlas       357 Feb 10 10:41 output.list
[2026-02-10 10:45:28] -rw-r--r--. 1 boincer umatlas       620 Feb 10 10:41 runtime_log
[2026-02-10 10:45:28] -rw-------. 1 boincer umatlas   3962880 Feb 10 10:41 result.tar.gz
[2026-02-10 10:45:28] -rw-r--r--. 1 boincer umatlas      9337 Feb 10 10:41 runtime_log.err
[2026-02-10 10:45:28] -rw-------. 1 boincer umatlas       656 Feb 10 10:41 F02KDmfKu98nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmhGhKDmaS0Dnm.diag
[2026-02-10 10:45:28] -rw-r--r--. 1 boincer umatlas      6614 Feb 10 10:45 init_data.xml
[2026-02-10 10:45:28] -rw-r--r--. 1 boincer umatlas      8192 Feb 10 10:45 boinc_mmap_file
[2026-02-10 10:45:28] -rw-r--r--. 1 boincer umatlas        28 Feb 10 10:45 wrapper_checkpoint.txt
[2026-02-10 10:45:28] -rw-r--r--. 1 boincer umatlas     21362 Feb 10 10:45 stderr.txt
[2026-02-10 10:45:28] HITS file was successfully produced:
[2026-02-10 10:45:28] -rw-------. 1 boincer umatlas 284596745 Feb 10 10:39 shared/HITS.pool.root.1
[2026-02-10 10:45:28]  *** Contents of shared directory: ***
[2026-02-10 10:45:28] total 941352
[2026-02-10 10:45:28] -rw-r--r--. 2 boincer umatlas 674758086 Feb 10 03:22 ATLAS.root_0
[2026-02-10 10:45:28] -rw-r--r--. 2 boincer umatlas     15845 Feb 10 03:22 start_atlas.sh
[2026-02-10 10:45:28] -rw-r--r--. 2 boincer umatlas    597951 Feb 10 03:22 input.tar.gz
[2026-02-10 10:45:28] -rw-------. 1 boincer umatlas 284596745 Feb 10 10:39 HITS.pool.root.1
[2026-02-10 10:45:28] -rw-------. 1 boincer umatlas   3962880 Feb 10 10:41 result.tar.gz
10:45:30 (2725868): run_atlas exited; CPU time 85466.341825
10:45:30 (2725868): called boinc_finish(0)

</stderr_txt>
]]>

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