Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
19:56:20 (390812): wrapper (7.7.26015): starting
19:56:20 (390812): wrapper: running run_atlas (--nthreads 4)
[2026-02-10 19:56:20] Arguments: --nthreads 4
[2026-02-10 19:56:20] Threads: 4
[2026-02-10 19:56:20] Checking for CVMFS
[2026-02-10 19:56:20] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-10 19:56:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-10 19:56:21] Running cvmfs_config stat atlas.cern.ch
[2026-02-10 19:56:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-10 19:56:21] 2.9.2.0 3607414 5515 97504 156089 0 188 25454398 36864000 0 130560 0 2599034 99.986 179161 10471 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-10 19:56:21] CVMFS is ok
[2026-02-10 19:56:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-10 19:56:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-10 19:56:21] Further information can be found at the LHC@home message board.
[2026-02-10 19:56:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-10 19:56:21] Checking for apptainer binary...
[2026-02-10 19:56:21] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-10 19:56:21] Running /usr/bin/apptainer --version
[2026-02-10 19:56:21] apptainer version 1.4.1-1.1
[2026-02-10 19:56:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-10 19:56:21] thA309
[2026-02-10 19:56:21] apptainer works
[2026-02-10 19:56:21] Set ATHENA_PROC_NUMBER=4
[2026-02-10 19:56:21] Set ATHENA_CORE_NUMBER=4
[2026-02-10 19:56:21] Starting ATLAS job with PandaID=7009881500
[2026-02-10 19:56:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-10 21:41:48]  *** The last 200 lines of the pilot log: ***
[2026-02-10 21:41:48] 2026-02-10 20:40:54,770 | INFO     | all payload control threads have been joined
[2026-02-10 21:41:48] 2026-02-10 20:40:55,008 | INFO     | all data control threads have been joined
[2026-02-10 21:41:48] 2026-02-10 20:40:55,284 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-10 21:41:48] 2026-02-10 20:40:55,284 | INFO     | aborting loop
[2026-02-10 21:41:48] 2026-02-10 20:40:55,505 | INFO     | [job] retrieve thread has finished
[2026-02-10 21:41:48] 2026-02-10 20:40:55,505 | INFO     | [job] queue monitor thread has finished
[2026-02-10 21:41:48] 2026-02-10 20:40:55,513 | INFO     | [payload] validate_pre thread has finished
[2026-02-10 21:41:48] 2026-02-10 20:40:55,594 | INFO     | [job] control thread has finished
[2026-02-10 21:41:48] 2026-02-10 20:40:55,683 | INFO     | [payload] validate_post thread has finished
[2026-02-10 21:41:48] 2026-02-10 20:40:55,696 | INFO     | [data] copytool_in thread has finished
[2026-02-10 21:41:48] 2026-02-10 20:40:55,776 | INFO     | [payload] control thread has finished
[2026-02-10 21:41:48] 2026-02-10 20:40:55,814 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-10 21:41:48] 2026-02-10 20:40:56,014 | INFO     | [data] control thread has finished
[2026-02-10 21:41:48] 2026-02-10 20:40:56,289 | INFO     | [job] job monitor thread has finished
[2026-02-10 21:41:48] 2026-02-10 20:40:56,773 | INFO     | [payload] failed_post thread has finished
[2026-02-10 21:41:48] 2026-02-10 20:40:56,855 | INFO     | [payload] execute_payloads thread has finished
[2026-02-10 21:41:48] 2026-02-10 20:40:56,865 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-10 21:41:48] 2026-02-10 20:40:56,867 | INFO     | [job] validate thread has finished
[2026-02-10 21:41:48] 2026-02-10 20:40:56,913 | INFO     | [job] create_data_payload thread has finished
[2026-02-10 21:41:48] 2026-02-10 20:40:57,820 | INFO     | [data] copytool_out thread has finished
[2026-02-10 21:41:48] 2026-02-10 20:41:00,872 | INFO     | [data] queue_monitor thread has finished
[2026-02-10 21:41:48] 2026-02-10 20:41:05,448 | INFO     | job.realtimelogging is not enabled
[2026-02-10 21:41:48] 2026-02-10 20:41:06,454 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-10 21:41:48] 2026-02-10 20:41:24,934 | INFO     | PID=394938 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-10 21:41:48] 2026-02-10 20:41:24,934 | INFO     | found 0 job(s) in 20 queues
[2026-02-10 21:41:48] 2026-02-10 20:41:24,934 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-10 21:41:48] 2026-02-10 20:41:24,935 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-10 21:41:48] 2026-02-10 20:41:28,877 [wrapper] supervise_pilot (15 min periods counter: 8)
[2026-02-10 21:41:48] 2026-02-10 20:41:41,610 | INFO     | [monitor] cgroup control has ended
[2026-02-10 21:41:48] 2026-02-10 20:41:43,245 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139686700427072)>', '<ExcThread(monitor, started 139685540124416)>']
[2026-02-10 21:41:48] 2026-02-10 20:41:44,036 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-10 21:41:48] 2026-02-10 20:41:44,036 | INFO     | [monitor] control thread has ended
[2026-02-10 21:41:48] 2026-02-10 20:41:48,271 | INFO     | all workflow threads have been joined
[2026-02-10 21:41:48] 2026-02-10 20:41:48,271 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-10 21:41:48] 2026-02-10 20:41:48,271 | INFO     | traces error code: 0
[2026-02-10 21:41:48] 2026-02-10 20:41:48,271 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-10 21:41:48] 2026-02-10 20:41:48,348 [wrapper] ==== pilot stdout END ====
[2026-02-10 21:41:48] 2026-02-10 20:41:48,352 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-10 21:41:48] 2026-02-10 20:41:48,356 [wrapper] pilotpid: 394938
[2026-02-10 21:41:48] 2026-02-10 20:41:48,361 [wrapper] Pilot exit status: 0
[2026-02-10 21:41:48] 2026-02-10 20:41:48,373 [wrapper] pandaids: 7009881500
[2026-02-10 21:41:48] 2026-02-10 20:41:48,398 [wrapper] cleanup supervisor_pilot  405677 394939
[2026-02-10 21:41:48] 2026-02-10 20:41:48,402 [wrapper] Test setup, not cleaning
[2026-02-10 21:41:48] 2026-02-10 20:41:48,407 [wrapper] apfmon messages muted
[2026-02-10 21:41:48] 2026-02-10 20:41:48,411 [wrapper] ==== wrapper stdout END ====
[2026-02-10 21:41:48] 2026-02-10 20:41:48,415 [wrapper] ==== wrapper stderr END ====
[2026-02-10 21:41:48]  *** Error codes and diagnostics ***
[2026-02-10 21:41:48]     "exeErrorCode": 0,
[2026-02-10 21:41:48]     "exeErrorDiag": "",
[2026-02-10 21:41:48]     "pilotErrorCode": 0,
[2026-02-10 21:41:48]     "pilotErrorDiag": "",
[2026-02-10 21:41:48]  *** Listing of results directory ***
[2026-02-10 21:41:48] total 946092
[2026-02-10 21:41:48] -rw-r--r-- 1 boinc boinc      5111 Feb 10 05:15 queuedata.json
[2026-02-10 21:41:48] -rw-r--r-- 1 boinc boinc    584627 Feb 10 05:15 pilot3.tar.gz
[2026-02-10 21:41:48] -rwx------ 1 boinc boinc     36322 Feb 10 05:15 runpilot2-wrapper.sh
[2026-02-10 21:41:48] -rw-r--r-- 1 boinc boinc       100 Feb 10 19:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-10 21:41:48] -rwxr-xr-x 1 boinc boinc      7986 Feb 10 19:56 run_atlas
[2026-02-10 21:41:48] -rw-r--r-- 1 boinc boinc       105 Feb 10 19:56 job.xml
[2026-02-10 21:41:48] -rw-r--r-- 2 boinc boinc 681964546 Feb 10 19:56 EVNT.48431094._000464.pool.root.1
[2026-02-10 21:41:48] -rw-r--r-- 2 boinc boinc    597958 Feb 10 19:56 input.tar.gz
[2026-02-10 21:41:48] -rw-r--r-- 2 boinc boinc     15845 Feb 10 19:56 start_atlas.sh
[2026-02-10 21:41:48] drwxrwx--x 2 boinc boinc      4096 Feb 10 19:56 shared
[2026-02-10 21:41:48] -rw-r--r-- 1 boinc boinc         0 Feb 10 19:56 boinc_setup_complete
[2026-02-10 21:41:48] -rw-r--r-- 1 boinc boinc      6377 Feb 10 19:56 init_data.xml
[2026-02-10 21:41:48] -rw-r--r-- 1 boinc boinc         0 Feb 10 19:56 boinc_lockfile
[2026-02-10 21:41:48] -rw-r--r-- 1 boinc boinc      2556 Feb 10 19:56 pandaJob.out
[2026-02-10 21:41:48] -rw------- 1 boinc boinc   1009534 Feb 10 19:56 agis_schedconf.cvmfs.json
[2026-02-10 21:41:48] -rw------- 1 boinc boinc   1512955 Feb 10 19:56 agis_ddmendpoints.agis.ALL.json
[2026-02-10 21:41:48] -rw------- 1 boinc boinc       427 Feb 10 19:56 workernode_map.json
[2026-02-10 21:41:48] drwx------ 5 boinc boinc      4096 Feb 10 19:56 pilot3
[2026-02-10 21:41:48] -rw------- 1 boinc boinc 280461867 Feb 10 21:40 HITS.48431096._020951.pool.root.1
[2026-02-10 21:41:48] -rw-r--r-- 1 boinc boinc       530 Feb 10 21:40 boinc_task_state.xml
[2026-02-10 21:41:48] -rw------- 1 boinc boinc      1020 Feb 10 21:40 memory_monitor_summary.json
[2026-02-10 21:41:48] -rw------- 1 boinc boinc    317278 Feb 10 21:40 log.48431096._020951.job.log.tgz.1
[2026-02-10 21:41:48] -rw------- 1 boinc boinc      6312 Feb 10 21:40 heartbeat.json
[2026-02-10 21:41:48] -rw-r--r-- 1 boinc boinc      8192 Feb 10 21:41 boinc_mmap_file
[2026-02-10 21:41:48] -rw-r--r-- 1 boinc boinc        27 Feb 10 21:41 wrapper_checkpoint.txt
[2026-02-10 21:41:48] -rw------- 1 boinc boinc        95 Feb 10 21:41 pilot_heartbeat.json
[2026-02-10 21:41:48] -rw------- 1 boinc boinc      4819 Feb 10 21:41 pilotlog.txt
[2026-02-10 21:41:48] -rw------- 1 boinc boinc    904624 Feb 10 21:41 log.48431096._020951.job.log.1
[2026-02-10 21:41:48] -rw------- 1 boinc boinc       357 Feb 10 21:41 output.list
[2026-02-10 21:41:48] -rw-r--r-- 1 boinc boinc       620 Feb 10 21:41 runtime_log
[2026-02-10 21:41:48] -rw------- 1 boinc boinc   1239040 Feb 10 21:41 result.tar.gz
[2026-02-10 21:41:48] -rw-r--r-- 1 boinc boinc      8896 Feb 10 21:41 runtime_log.err
[2026-02-10 21:41:48] -rw------- 1 boinc boinc       657 Feb 10 21:41 3bNNDmfKu98n9Rq4apOajLDm4fhM0noT9bVooX4SDmAYgKDmv7wKQo.diag
[2026-02-10 21:41:48] -rw-r--r-- 1 boinc boinc      7158 Feb 10 21:41 stderr.txt
[2026-02-10 21:41:48] HITS file was successfully produced:
[2026-02-10 21:41:48] -rw------- 1 boinc boinc 280461867 Feb 10 21:40 shared/HITS.pool.root.1
[2026-02-10 21:41:48]  *** Contents of shared directory: ***
[2026-02-10 21:41:48] total 941696
[2026-02-10 21:41:48] -rw-r--r-- 2 boinc boinc 681964546 Feb 10 19:56 ATLAS.root_0
[2026-02-10 21:41:48] -rw-r--r-- 2 boinc boinc    597958 Feb 10 19:56 input.tar.gz
[2026-02-10 21:41:48] -rw-r--r-- 2 boinc boinc     15845 Feb 10 19:56 start_atlas.sh
[2026-02-10 21:41:48] -rw------- 1 boinc boinc 280461867 Feb 10 21:40 HITS.pool.root.1
[2026-02-10 21:41:48] -rw------- 1 boinc boinc   1239040 Feb 10 21:41 result.tar.gz
21:41:49 (390812): run_atlas exited; CPU time 23880.284789
21:41:49 (390812): called boinc_finish(0)

</stderr_txt>
]]>

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