Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-02-10 04:39:48 (3321464): vboxwrapper version 26210
2026-02-10 04:39:48 (3321464): BOINC client version: 8.2.8
2026-02-10 04:39:49 (3321464): Detected: VirtualBox VboxManage Interface (Version: 7.2.2)
2026-02-10 04:39:49 (3321464): Successfully copied 'init_data.xml' to the shared directory.
2026-02-10 04:39:49 (3321464): Create VM. (boinc_ba8f59d68ee2f9d2, slot#16)
2026-02-10 04:39:50 (3321464): Setting Memory Size for VM. (4608MB)
2026-02-10 04:39:50 (3321464): Setting CPU Count for VM. (2)
2026-02-10 04:39:50 (3321464): Setting Chipset Options for VM.
2026-02-10 04:39:51 (3321464): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-02-10 04:39:51 (3321464): Setting Boot Options for VM.
2026-02-10 04:39:52 (3321464): Setting Network Configuration for NAT. (Driver: virtio)
2026-02-10 04:39:53 (3321464): Enabling VM Network Access.
2026-02-10 04:39:53 (3321464): Disabling USB Support for VM.
2026-02-10 04:39:54 (3321464): Disabling COM Port Support for VM.
2026-02-10 04:39:54 (3321464): Disabling LPT Port Support for VM.
2026-02-10 04:39:55 (3321464): Disabling Audio Support for VM.
2026-02-10 04:39:55 (3321464): Disabling Clipboard Support for VM.
2026-02-10 04:39:56 (3321464): Disabling Drag and Drop Support for VM.
2026-02-10 04:39:56 (3321464): Adding storage controller(s) to VM.
2026-02-10 04:39:57 (3321464): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-02-10 04:39:57 (3321464): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-02-10 04:39:58 (3321464): forwarding host port 52783 to guest port 80
2026-02-10 04:39:58 (3321464): Enabling remote desktop for VM.
2026-02-10 04:39:59 (3321464): Enabling shared directory for VM.
2026-02-10 04:40:00 (3321464): Starting VM using VBoxManage interface. (boinc_ba8f59d68ee2f9d2, slot#16)
2026-02-10 04:40:02 (3321464): Successfully started VM. (PID = '3322209')
2026-02-10 04:40:02 (3321464): Reporting VM Process ID to BOINC.
2026-02-10 04:40:02 (3321464): Guest Log: BIOS: VirtualBox 7.2.2
2026-02-10 04:40:02 (3321464): Guest Log: CPUID EDX: 0x178bfbff
2026-02-10 04:40:02 (3321464): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-02-10 04:40:02 (3321464): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-02-10 04:40:02 (3321464): VM state change detected. (old = 'poweredoff', new = 'running')
2026-02-10 04:40:02 (3321464): Detected: Web Application Enabled (http://localhost:52783)
2026-02-10 04:40:02 (3321464): Detected: Remote Desktop Enabled (localhost:42739)
2026-02-10 04:40:02 (3321464): Preference change detected
2026-02-10 04:40:02 (3321464): Setting CPU throttle for VM. (100%)
2026-02-10 04:40:02 (3321464): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-02-10 04:40:04 (3321464): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-02-10 04:40:04 (3321464): Guest Log: BIOS: Booting from Hard Disk...
2026-02-10 04:40:07 (3321464): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-02-10 04:40:07 (3321464): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-02-10 04:40:07 (3321464): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-02-10 04:40:07 (3321464): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-02-10 04:40:07 (3321464): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-02-10 04:40:07 (3321464): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-02-10 04:40:07 (3321464): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-02-10 04:40:07 (3321464): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-02-10 04:40:07 (3321464): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-02-10 04:40:07 (3321464): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-02-10 04:40:07 (3321464): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-02-10 04:40:07 (3321464): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-02-10 04:40:07 (3321464): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-02-10 04:40:07 (3321464): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-02-10 04:40:07 (3321464): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-02-10 04:40:07 (3321464): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-02-10 04:40:07 (3321464): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-02-10 04:40:07 (3321464): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-02-10 04:40:07 (3321464): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-02-10 04:40:07 (3321464): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-02-10 04:40:07 (3321464): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-02-10 04:40:07 (3321464): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-02-10 04:40:07 (3321464): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-02-10 04:40:07 (3321464): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-02-10 04:40:07 (3321464): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-02-10 04:40:07 (3321464): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-02-10 04:40:07 (3321464): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-02-10 04:40:07 (3321464): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-02-10 04:40:07 (3321464): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-02-10 04:40:07 (3321464): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-02-10 04:40:07 (3321464): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-02-10 04:40:07 (3321464): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-02-10 04:40:45 (3321464): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-02-10 04:40:45 (3321464): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-02-10 04:40:54 (3321464): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-02-10 04:40:54 (3321464): Guest Log: 00:00:00.000324 main     Log opened 2026-02-10T03:40:52.062376000Z
2026-02-10 04:40:54 (3321464): Guest Log: 00:00:00.000466 main     OS Product: Linux
2026-02-10 04:40:54 (3321464): Guest Log: 00:00:00.000515 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-02-10 04:40:54 (3321464): Guest Log: 00:00:00.000555 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-02-10 04:40:54 (3321464): Guest Log: 00:00:00.000615 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-02-10 04:40:54 (3321464): Guest Log: 00:00:00.000616 main     Process ID: 1274
2026-02-10 04:40:54 (3321464): Guest Log: 00:00:00.000616 main     Package type: LINUX_64BITS_GENERIC
2026-02-10 04:40:54 (3321464): Guest Log: 00:00:00.003361 main     5.2.32 r132073 started. Verbose level = 0
2026-02-10 04:40:54 (3321464): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-02-10 04:40:54 (3321464): Guest Log: [INFO] Mounting shared directory
2026-02-10 04:40:54 (3321464): Guest Log: [INFO] Checking for init_data.xml
2026-02-10 04:40:57 (3321464): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-02-10 04:40:57 (3321464): Guest Log: [INFO] Detected branch: prod
2026-02-10 04:40:57 (3321464): Guest Log: This is the prod version of the ATLAS job wrapper
2026-02-10 04:40:57 (3321464): Guest Log: Copying input files
2026-02-10 04:41:01 (3321464): Guest Log: Copied input files into RunAtlas.
2026-02-10 04:41:01 (3321464): Guest Log: Detected user-configured HTTP proxy at http://192.168.1.179:3128 - will set in /etc/cvmfs/default.local
2026-02-10 04:41:08 (3321464): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-02-10 04:41:08 (3321464): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-02-10 04:41:08 (3321464): Guest Log: 2.6.3.0 1548 0 31608 156074 3 1 3117739 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.1.179:3128 1
2026-02-10 04:41:09 (3321464): Guest Log: copied the webapp to /var/www
2026-02-10 04:41:09 (3321464): Guest Log: ATHENA_PROC_NUMBER=2
2026-02-10 04:41:09 (3321464): Guest Log: ATHENA_CORE_NUMBER=2
2026-02-10 04:41:09 (3321464): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-02-10 04:41:09 (3321464): Guest Log:  *** Starting ATLAS job. (PandaID=6992859614 taskID=48442031) ***
2026-02-10 06:19:02 (3321464): Status Report: Elapsed Time: '6000.000000'
2026-02-10 06:19:02 (3321464): Status Report: CPU Time: '11337.750000'
2026-02-10 07:58:03 (3321464): Status Report: Elapsed Time: '12000.000000'
2026-02-10 07:58:03 (3321464): Status Report: CPU Time: '23198.080000'
2026-02-10 09:37:03 (3321464): Status Report: Elapsed Time: '18000.000000'
2026-02-10 09:37:03 (3321464): Status Report: CPU Time: '35055.780000'
2026-02-10 11:16:03 (3321464): Status Report: Elapsed Time: '24000.000000'
2026-02-10 11:16:03 (3321464): Status Report: CPU Time: '46902.540000'
2026-02-10 12:55:04 (3321464): Status Report: Elapsed Time: '30000.000000'
2026-02-10 12:55:04 (3321464): Status Report: CPU Time: '58761.290000'
2026-02-10 13:09:06 (3321464): Guest Log:  *** Job finished ***
2026-02-10 13:09:06 (3321464): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-02-10 13:09:06 (3321464): Guest Log: 2026-02-10 12:06:35,622 | INFO     | [data] copytool_out thread has finished
2026-02-10 13:09:06 (3321464): Guest Log: 2026-02-10 12:06:36,204 | INFO     | [data] queue_monitor thread has finished
2026-02-10 13:09:06 (3321464): Guest Log: 2026-02-10 12:07:13,533 | INFO     | [monitor] cgroup control has ended
2026-02-10 13:09:06 (3321464): Guest Log: 2026-02-10 12:07:15,310 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140197557712704)>', '<ExcThread(monitor, started 140196985169664)>']
2026-02-10 13:09:06 (3321464): Guest Log: 2026-02-10 12:07:16,277 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-02-10 13:09:06 (3321464): Guest Log: 2026-02-10 12:07:16,278 | INFO     | [monitor] control thread has ended
2026-02-10 13:09:06 (3321464): Guest Log: 2026-02-10 12:07:20,316 | INFO     | all workflow threads have been joined
2026-02-10 13:09:06 (3321464): Guest Log: 2026-02-10 12:07:20,316 | INFO     | end of generic workflow (traces error code: 0)
2026-02-10 13:09:06 (3321464): Guest Log: 2026-02-10 12:07:20,316 | INFO     | traces error code: 0
2026-02-10 13:09:06 (3321464): Guest Log: 2026-02-10 12:07:20,317 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-02-10 13:09:06 (3321464): Guest Log: 2026-02-10 12:07:20,454 [wrapper] ==== pilot stdout END ====
2026-02-10 13:09:06 (3321464): Guest Log: 2026-02-10 12:07:20,467 [wrapper] ==== wrapper stdout RESUME ====
2026-02-10 13:09:06 (3321464): Guest Log: 2026-02-10 12:07:20,476 [wrapper] pilotpid: 5928
2026-02-10 13:09:06 (3321464): Guest Log: 2026-02-10 12:07:20,485 [wrapper] Pilot exit status: 0
2026-02-10 13:09:06 (3321464): Guest Log: 2026-02-10 12:07:20,517 [wrapper] pandaids: 6992859614
2026-02-10 13:09:06 (3321464): Guest Log: 2026-02-10 12:07:20,567 [wrapper] cleanup supervisor_pilot   505 5929
2026-02-10 13:09:06 (3321464): Guest Log: 2026-02-10 12:07:20,575 [wrapper] Test setup, not cleaning
2026-02-10 13:09:06 (3321464): Guest Log: 2026-02-10 12:07:20,582 [wrapper] apfmon messages muted
2026-02-10 13:09:06 (3321464): Guest Log: 2026-02-10 12:07:20,590 [wrapper] ==== wrapper stdout END ====
2026-02-10 13:09:06 (3321464): Guest Log: 2026-02-10 12:07:20,600 [wrapper] ==== wrapper stderr END ====
2026-02-10 13:09:06 (3321464): Guest Log:  *** Error codes and diagnostics ***
2026-02-10 13:09:06 (3321464): Guest Log:     "exeErrorCode": 0,
2026-02-10 13:09:06 (3321464): Guest Log:     "exeErrorDiag": "",
2026-02-10 13:09:06 (3321464): Guest Log:     "pilotErrorCode": 0,
2026-02-10 13:09:06 (3321464): Guest Log:     "pilotErrorDiag": "",
2026-02-10 13:09:06 (3321464): Guest Log:  *** Listing of results directory ***
2026-02-10 13:09:06 (3321464): Guest Log: total 186616
2026-02-10 13:09:06 (3321464): Guest Log: -rw-r--r--. 1 atlas atlas    584422 Feb  1 22:04 pilot3.tar.gz
2026-02-10 13:09:06 (3321464): Guest Log: -rwx------. 1 atlas atlas     36322 Feb  1 22:08 runpilot2-wrapper.sh
2026-02-10 13:09:06 (3321464): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Feb  1 22:12 queuedata.json
2026-02-10 13:09:06 (3321464): Guest Log: -rw-r--r--. 1 atlas atlas    597750 Feb 10 03:40 input.tar.gz
2026-02-10 13:09:06 (3321464): Guest Log: -rw-r--r--. 1 atlas atlas     15845 Feb 10 03:40 start_atlas.sh
2026-02-10 13:09:06 (3321464): Guest Log: -rw-r--r--. 1 atlas atlas     10200 Feb 10 03:40 init_data.xml
2026-02-10 13:09:06 (3321464): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 10 03:40 EVNT.48442027._000005.pool.root.1 -> /data/./ATLAS.root_0
2026-02-10 13:09:06 (3321464): Guest Log: -rw-r--r--. 1 atlas atlas      2526 Feb 10 03:41 pandaJob.out
2026-02-10 13:09:06 (3321464): Guest Log: -rw-------. 1 atlas atlas        50 Feb 10 03:41 setup.sh.local
2026-02-10 13:09:06 (3321464): Guest Log: -rw-------. 1 atlas atlas   1009496 Feb 10 03:41 agis_schedconf.cvmfs.json
2026-02-10 13:09:06 (3321464): Guest Log: -rw-------. 1 atlas atlas       428 Feb 10 03:41 workernode_map.json
2026-02-10 13:09:06 (3321464): Guest Log: drwx------. 5 atlas atlas      4096 Feb 10 03:41 pilot3
2026-02-10 13:09:06 (3321464): Guest Log: -rw-------. 1 atlas atlas        95 Feb 10 12:05 pilot_heartbeat.json
2026-02-10 13:09:06 (3321464): Guest Log: -rw-------. 1 atlas atlas 177673254 Feb 10 12:05 HITS.48442031._000187.pool.root.1
2026-02-10 13:09:06 (3321464): Guest Log: -rw-------. 1 atlas atlas      1028 Feb 10 12:06 memory_monitor_summary.json
2026-02-10 13:09:06 (3321464): Guest Log: -rw-------. 1 atlas atlas   1512955 Feb 10 12:06 agis_ddmendpoints.agis.ALL.json
2026-02-10 13:09:06 (3321464): Guest Log: -rw-------. 1 atlas atlas    613254 Feb 10 12:06 log.48442031._000187.job.log.tgz.1
2026-02-10 13:09:06 (3321464): Guest Log: -rw-------. 1 atlas atlas      6369 Feb 10 12:06 heartbeat.json
2026-02-10 13:09:06 (3321464): Guest Log: -rw-------. 1 atlas atlas      4608 Feb 10 12:07 pilotlog.txt
2026-02-10 13:09:06 (3321464): Guest Log: -rw-------. 1 atlas atlas   4158466 Feb 10 12:07 log.48442031._000187.job.log.1
2026-02-10 13:09:06 (3321464): Guest Log: -rw-------. 1 atlas atlas       357 Feb 10 12:07 output.list
2026-02-10 13:09:06 (3321464): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 10 12:07 runtime_log
2026-02-10 13:09:06 (3321464): Guest Log: -rw-------. 1 atlas atlas   4792320 Feb 10 12:07 result.tar.gz
2026-02-10 13:09:06 (3321464): Guest Log: -rw-r--r--. 1 atlas atlas      9232 Feb 10 12:07 runtime_log.err
2026-02-10 13:09:06 (3321464): Guest Log: -rw-------. 1 atlas atlas       656 Feb 10 12:07 iYiLDmVnu68n9Rq4apOajLDm4fhM0noT9bVooX4SDmy3QKDmFg187n.diag
2026-02-10 13:09:06 (3321464): Guest Log: Looking for outputfile HITS.48442031._000187.pool.root.1
2026-02-10 13:09:06 (3321464): Guest Log: HITS file was successfully produced
2026-02-10 13:09:06 (3321464): Guest Log: -rw-------. 1 atlas atlas 177673254 Feb 10 12:05 /home/atlas/RunAtlas/HITS.48442031._000187.pool.root.1
2026-02-10 13:09:06 (3321464): Guest Log: Successfully finished the ATLAS job!
2026-02-10 13:09:06 (3321464): Guest Log: Copying the results back to the shared directory!
2026-02-10 13:09:06 (3321464): Guest Log:  *** Contents of shared directory: ***
2026-02-10 13:09:06 (3321464): Guest Log: total 491428
2026-02-10 13:09:06 (3321464): Guest Log: -rw-r--r--. 1 root root 497796708 Feb 10 03:39 ATLAS.root_0
2026-02-10 13:09:06 (3321464): Guest Log: -rw-r--r--. 1 root root     10200 Feb 10 03:39 init_data.xml
2026-02-10 13:09:06 (3321464): Guest Log: -rw-r--r--. 1 root root    597750 Feb 10 03:39 input.tar.gz
2026-02-10 13:09:06 (3321464): Guest Log: -rw-r--r--. 1 root root   4792320 Feb 10  2026 result.tar.gz
2026-02-10 13:09:06 (3321464): Guest Log: -rw-r--r--. 1 root root     15845 Feb 10 03:39 start_atlas.sh
2026-02-10 13:09:06 (3321464): Guest Log:  *** Success! Shutting down the machine. ***
2026-02-10 13:09:06 (3321464): VM Completion File Detected.
2026-02-10 13:09:06 (3321464): Powering off VM.
2026-02-10 13:09:07 (3321464): Successfully stopped VM.
2026-02-10 13:09:07 (3321464): Deregistering VM. (boinc_ba8f59d68ee2f9d2, slot#16)
2026-02-10 13:09:07 (3321464): Removing network bandwidth throttle group from VM.
2026-02-10 13:09:08 (3321464): Removing VM from VirtualBox.
2026-02-10 13:09:13 (3321464): called boinc_finish(0)

</stderr_txt>
]]>

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