Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:40:52 (2966309): wrapper (7.7.26015): starting
21:40:52 (2966309): wrapper: running run_atlas (--nthreads 8)
[2026-02-09 21:40:52] Arguments: --nthreads 8
[2026-02-09 21:40:52] Threads: 8
[2026-02-09 21:40:52] Checking for CVMFS
[2026-02-09 21:40:52] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-09 21:40:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-09 21:40:52] Running cvmfs_config stat atlas.cern.ch
[2026-02-09 21:40:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-09 21:40:53] 2.13.3.0 8759 66872 181568 156072 0 881 26012716 40960001 45861 16776704 0 525484350 99.708 385380767 45182 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-09 21:40:53] CVMFS is ok
[2026-02-09 21:40:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-09 21:40:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-09 21:40:53] Further information can be found at the LHC@home message board.
[2026-02-09 21:40:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-09 21:40:53] Checking for apptainer binary...
[2026-02-09 21:40:53] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-09 21:40:53] Running /usr/bin/apptainer --version
[2026-02-09 21:40:53] apptainer version 1.4.5-2.el9
[2026-02-09 21:40:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-09 21:40:53] c-208-39.aglt2.org
[2026-02-09 21:40:53] apptainer works
[2026-02-09 21:40:53] Set ATHENA_PROC_NUMBER=8
[2026-02-09 21:40:53] Set ATHENA_CORE_NUMBER=8
[2026-02-09 21:40:54] Starting ATLAS job with PandaID=6996651041
[2026-02-09 21:40:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-09 22:41:12]  *** The last 200 lines of the pilot log: ***
[2026-02-09 22:41:12]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-09 22:41:12]  is_altstaged=None
[2026-02-09 22:41:12]  is_tar=False
[2026-02-09 22:41:12]  lfn=log.48317931._014022.job.log.tgz.1
[2026-02-09 22:41:12]  mtime=0
[2026-02-09 22:41:12]  protocol_id=None
[2026-02-09 22:41:12]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-09 22:41:12]  replicas=None
[2026-02-09 22:41:12]  scope=mc23_13p6TeV
[2026-02-09 22:41:12]  status=None
[2026-02-09 22:41:12]  status_code=0
[2026-02-09 22:41:12]  storage_token=
[2026-02-09 22:41:12]  surl=/tmp/boinchome/slots/5/PanDA_Pilot-6996651041/log.48317931._014022.job.log.tgz.1
[2026-02-09 22:41:12]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/87/8c/log.48317931._014022.job.log.tgz.1
[2026-02-09 22:41:12]  workdir=None
[2026-02-09 22:41:12] ]
[2026-02-09 22:41:12] 2026-02-10 03:40:33,139 | INFO     | transferring file log.48317931._014022.job.log.tgz.1 from /tmp/boinchome/slots/5/PanDA_Pilot-6996651041/log.48317931._014022.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-02-09 22:41:12] 2026-02-10 03:40:33,139 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/5/PanDA_Pilot-6996651041/log.48317931._014022.job.log.tgz.1 /tmp/boinchome/slots/5/log.48317931._014022.job
[2026-02-09 22:41:12] 2026-02-10 03:40:33,186 | INFO     | adding to output.list: log.48317931._014022.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/87/8c/log.48317931._014022.job.log.tg
[2026-02-09 22:41:12] 2026-02-10 03:40:33,187 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-09 22:41:12] 2026-02-10 03:40:33,187 | INFO     | summary of transferred files:
[2026-02-09 22:41:12] 2026-02-10 03:40:33,187 | INFO     |  -- lfn=log.48317931._014022.job.log.tgz.1, status_code=0, status=transferred
[2026-02-09 22:41:12] 2026-02-10 03:40:33,187 | INFO     | stage-out finished correctly
[2026-02-09 22:41:12] 2026-02-10 03:40:34,904 | INFO     | time since job start (3524s) is within the limit (349056.0s)
[2026-02-09 22:41:12] 2026-02-10 03:40:35,422 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-09 22:41:12] 2026-02-10 03:40:35,916 | INFO     | job 6996651041 has state=finished
[2026-02-09 22:41:12] 2026-02-10 03:40:35,916 | INFO     | preparing for final server update for job 6996651041 in state='finished'
[2026-02-09 22:41:12] 2026-02-10 03:40:35,917 | INFO     | reading metadata from: /tmp/boinchome/slots/5/PanDA_Pilot-6996651041/jobReport.json
[2026-02-09 22:41:12] 2026-02-10 03:40:35,918 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/5/workernode_map.json
[2026-02-09 22:41:12] 2026-02-10 03:40:35,918 | INFO     | this job has now completed (state=finished)
[2026-02-09 22:41:12] 2026-02-10 03:40:35,918 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-09 22:41:12] 2026-02-10 03:40:35,919 | INFO     | log transfer has been attempted: DONE
[2026-02-09 22:41:12] 2026-02-10 03:40:35,919 | INFO     | job 6996651041 has finished - writing final server update
[2026-02-09 22:41:12] 2026-02-10 03:40:35,919 | INFO     | total number of processed events: 400 (read)
[2026-02-09 22:41:12] 2026-02-10 03:40:35,982 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6996651041/memory_monitor_summary.json (trf name=prmon)
[2026-02-09 22:41:12] 2026-02-10 03:40:35,983 | INFO     | extracted standard info from prmon json
[2026-02-09 22:41:12] 2026-02-10 03:40:35,983 | INFO     | extracted standard memory fields from prmon json
[2026-02-09 22:41:12] 2026-02-10 03:40:35,983 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-09 22:41:12] 2026-02-10 03:40:35,983 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-09 22:41:12] 2026-02-10 03:40:35,983 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-09 22:41:12] 2026-02-10 03:40:35,984 | INFO     | fitting pss+swap vs Time
[2026-02-09 22:41:12] 2026-02-10 03:40:35,984 | INFO     | sum of square deviations: 38743820.180000044
[2026-02-09 22:41:12] 2026-02-10 03:40:35,984 | INFO     | sum of deviations: -2018519530.5800004
[2026-02-09 22:41:12] 2026-02-10 03:40:35,984 | INFO     | mean x: 1770693167.58
[2026-02-09 22:41:12] 2026-02-10 03:40:35,984 | INFO     | mean y: 2556928.02
[2026-02-09 22:41:12] 2026-02-10 03:40:35,984 | INFO     | intersect: 92254139885.49571
[2026-02-09 22:41:12] 2026-02-10 03:40:35,985 | INFO     | chi2: 0.011719203809573137
[2026-02-09 22:41:12] 2026-02-10 03:40:35,985 | INFO     | current memory leak: -52.10 B/s (using 50 data points, chi2=0.01)
[2026-02-09 22:41:12] 2026-02-10 03:40:35,985 | INFO     | could have reported an average CPU frequency of 3800 MHz (5 samples)
[2026-02-09 22:41:12] 2026-02-10 03:40:35,985 | INFO     | ..............................
[2026-02-09 22:41:12] 2026-02-10 03:40:35,985 | INFO     | . Timing measurements:
[2026-02-09 22:41:12] 2026-02-10 03:40:35,985 | INFO     | . get job = 0 s
[2026-02-09 22:41:12] 2026-02-10 03:40:35,985 | INFO     | . initial setup = 20 s
[2026-02-09 22:41:12] 2026-02-10 03:40:35,985 | INFO     | . payload setup = 25 s
[2026-02-09 22:41:12] 2026-02-10 03:40:35,985 | INFO     | . stage-in = 0 s
[2026-02-09 22:41:12] 2026-02-10 03:40:35,985 | INFO     | . payload execution = 3481 s
[2026-02-09 22:41:12] 2026-02-10 03:40:35,985 | INFO     | . stage-out = 1 s
[2026-02-09 22:41:12] 2026-02-10 03:40:35,985 | INFO     | . log creation = 0 s
[2026-02-09 22:41:12] 2026-02-10 03:40:35,985 | INFO     | ..............................
[2026-02-09 22:41:12] 2026-02-10 03:40:36,092 | INFO     | 
[2026-02-09 22:41:12] 2026-02-10 03:40:36,092 | INFO     | job summary report
[2026-02-09 22:41:12] 2026-02-10 03:40:36,092 | INFO     | --------------------------------------------------
[2026-02-09 22:41:12] 2026-02-10 03:40:36,092 | INFO     | PanDA job id: 6996651041
[2026-02-09 22:41:12] 2026-02-10 03:40:36,092 | INFO     | task id: 48317931
[2026-02-09 22:41:12] 2026-02-10 03:40:36,092 | INFO     | errors: (none)
[2026-02-09 22:41:12] 2026-02-10 03:40:36,093 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-09 22:41:12] 2026-02-10 03:40:36,093 | INFO     | pilot state: finished 
[2026-02-09 22:41:12] 2026-02-10 03:40:36,093 | INFO     | transexitcode: 0
[2026-02-09 22:41:12] 2026-02-10 03:40:36,093 | INFO     | exeerrorcode: 0
[2026-02-09 22:41:12] 2026-02-10 03:40:36,093 | INFO     | exeerrordiag: 
[2026-02-09 22:41:12] 2026-02-10 03:40:36,093 | INFO     | exitcode: 0
[2026-02-09 22:41:12] 2026-02-10 03:40:36,093 | INFO     | exitmsg: OK
[2026-02-09 22:41:12] 2026-02-10 03:40:36,093 | INFO     | cpuconsumptiontime: 21927 s
[2026-02-09 22:41:12] 2026-02-10 03:40:36,093 | INFO     | nevents: 400
[2026-02-09 22:41:12] 2026-02-10 03:40:36,093 | INFO     | neventsw: 0
[2026-02-09 22:41:12] 2026-02-10 03:40:36,093 | INFO     | pid: 2993930
[2026-02-09 22:41:12] 2026-02-10 03:40:36,093 | INFO     | pgrp: 2993930
[2026-02-09 22:41:12] 2026-02-10 03:40:36,093 | INFO     | corecount: 8
[2026-02-09 22:41:12] 2026-02-10 03:40:36,093 | INFO     | event service: False
[2026-02-09 22:41:12] 2026-02-10 03:40:36,093 | INFO     | sizes: {0: 2282969, 1: 2283029, 11: 2283057, 3510: 2308754, 3512: 2317752, 3514: 2318162}
[2026-02-09 22:41:12] 2026-02-10 03:40:36,093 | INFO     | --------------------------------------------------
[2026-02-09 22:41:12] 2026-02-10 03:40:36,093 | INFO     | 
[2026-02-09 22:41:12] 2026-02-10 03:40:36,093 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2026-02-09 22:41:12] 2026-02-10 03:40:36,127 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-09 22:41:12] 2026-02-10 03:40:36,128 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-09 22:41:12] 2026-02-10 03:40:36,128 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-09 22:41:12] 2026-02-10 03:40:36,128 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-09 22:41:12] 2026-02-10 03:40:36,128 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-09 22:41:12] 2026-02-10 03:40:36,128 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-09 22:41:12] 2026-02-10 03:40:36,128 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-09 22:41:12] 2026-02-10 03:40:36,128 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-09 22:41:12] 2026-02-10 03:40:36,128 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-09 22:41:12] 2026-02-10 03:40:36,128 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-09 22:41:12] 2026-02-10 03:40:36,128 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-09 22:41:12] 2026-02-10 03:40:36,128 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-09 22:41:12] 2026-02-10 03:40:36,128 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-09 22:41:12] 2026-02-10 03:40:36,128 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-09 22:41:12] 2026-02-10 03:40:36,128 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-09 22:41:12] 2026-02-10 03:40:36,128 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-09 22:41:12] 2026-02-10 03:40:36,128 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-09 22:41:12] 2026-02-10 03:40:36,128 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-09 22:41:12] 2026-02-10 03:40:36,128 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-09 22:41:12] 2026-02-10 03:40:36,129 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-09 22:41:12] 2026-02-10 03:40:36,129 | INFO     | job 6996651041 has completed (purged errors)
[2026-02-09 22:41:12] 2026-02-10 03:40:36,129 | INFO     | overall cleanup function is called
[2026-02-09 22:41:12] 2026-02-10 03:40:37,141 | INFO     | --- collectZombieJob: --- 10, [2993930]
[2026-02-09 22:41:12] 2026-02-10 03:40:37,141 | INFO     | zombie collector waiting for pid 2993930
[2026-02-09 22:41:12] 2026-02-10 03:40:37,141 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-09 22:41:12] 2026-02-10 03:40:37,141 | INFO     | collected zombie processes
[2026-02-09 22:41:12] 2026-02-10 03:40:37,142 | INFO     | will attempt to kill all subprocesses of pid=2993930
[2026-02-09 22:41:12] 2026-02-10 03:40:39,029 | WARNING  | process 2993930 can no longer be monitored (due to stat problems) - aborting
[2026-02-09 22:41:12] 2026-02-10 03:40:39,042 | INFO     | process IDs to be killed: [2993930] (in reverse order)
[2026-02-09 22:41:12] 2026-02-10 03:40:39,402 | WARNING  | found no corresponding commands to process id(s)
[2026-02-09 22:41:12] 2026-02-10 03:40:39,403 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-09 22:41:12] 2026-02-10 03:40:39,472 | INFO     | did not find any defunct processes belonging to 2993930
[2026-02-09 22:41:12] 2026-02-10 03:40:39,506 | INFO     | using path: /tmp/boinchome/slots/5/memory_monitor_summary.json (trf name=prmon)
[2026-02-09 22:41:12] 2026-02-10 03:40:39,624 | INFO     | did not find any defunct processes belonging to 2993930
[2026-02-09 22:41:12] 2026-02-10 03:40:39,624 | INFO     | ready for new job
[2026-02-09 22:41:12] 2026-02-10 03:40:39,624 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-09 22:41:12] 2026-02-10 03:40:39,626 | INFO     | **************************************
[2026-02-09 22:41:12] 2026-02-10 03:40:39,626 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-09 22:41:12] 2026-02-10 03:40:39,626 | INFO     | **************************************
[2026-02-09 22:41:12] 2026-02-10 03:40:39,626 | INFO     | 
[2026-02-09 22:41:12] 2026-02-10 03:40:39,654 | INFO     | architecture information:
[2026-02-09 22:41:12] 2026-02-10 03:40:39,672 | INFO     | executing command: cat /etc/os-release
[2026-02-09 22:41:12] 2026-02-10 03:40:39,701 | INFO     | cat /etc/os-release:
[2026-02-09 22:41:12] NAME="CentOS Linux"
[2026-02-09 22:41:12] VERSION="7 (Core)"
[2026-02-09 22:41:12] ID="centos"
[2026-02-09 22:41:12] ID_LIKE="rhel fedora"
[2026-02-09 22:41:12] VERSION_ID="7"
[2026-02-09 22:41:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-09 22:41:12] ANSI_COLOR="0;31"
[2026-02-09 22:41:12] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-09 22:41:12] HOME_URL="https://www.centos.org/"
[2026-02-09 22:41:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-09 22:41:12] 
[2026-02-09 22:41:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-09 22:41:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-09 22:41:12] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-09 22:41:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-09 22:41:12] 
[2026-02-09 22:41:12] 2026-02-10 03:40:39,701 | INFO     | **************************************
[2026-02-09 22:41:12] 2026-02-10 03:40:40,143 | INFO     | number of running child processes to parent process 2993930: 1
[2026-02-09 22:41:12] 2026-02-10 03:40:40,143 | INFO     | maximum number of monitored processes: 6
[2026-02-09 22:41:12] 2026-02-10 03:40:40,143 | INFO     | aborting job monitoring since job object (job id=6996651041) has expired
[2026-02-09 22:41:12] 2026-02-10 03:40:40,203 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2026-02-09 22:41:12] 2026-02-10 03:40:40,259 | INFO     | sufficient remaining disk space (163914448896 B)
[2026-02-09 22:41:12] 2026-02-10 03:40:40,260 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-09 22:41:12] 2026-02-10 03:40:40,260 | INFO     | current server update state: UPDATING_FINAL
[2026-02-09 22:41:12] 2026-02-10 03:40:40,260 | INFO     | update_server=False
[2026-02-09 22:41:12] 2026-02-10 03:40:40,260 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-09 22:41:12] 2026-02-10 03:40:40,260 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-09 22:41:12] 2026-02-10 03:40:40,260 | INFO     | will abort loop
[2026-02-09 22:41:12] 2026-02-10 03:40:40,624 | INFO     | all data control threads have been joined
[2026-02-09 22:41:12] 2026-02-10 03:40:40,706 | INFO     | all payload control threads have been joined
[2026-02-09 22:41:12] 2026-02-10 03:40:41,120 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-09 22:41:12] 2026-02-10 03:40:41,245 | INFO     | all job control threads have been joined
[2026-02-09 22:41:12] 2026-02-10 03:40:41,265 | INFO     | [job] retrieve thread has finished
[2026-02-09 22:41:12] 2026-02-10 03:40:41,266 | INFO     | [job] job monitor thread has finished
[2026-02-09 22:41:12] 2026-02-10 03:40:41,340 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-09 22:41:12] 2026-02-10 03:40:41,455 | INFO     | [data] copytool_in thread has finished
[2026-02-09 22:41:12] 2026-02-10 03:40:41,532 | INFO     | [payload] validate_pre thread has finished
[2026-02-09 22:41:12] 2026-02-10 03:40:41,539 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-09 22:41:12] 2026-02-10 03:40:41,630 | INFO     | [data] control thread has finished
[2026-02-09 22:41:12] 2026-02-10 03:40:41,699 | INFO     | [job] validate thread has finished
[2026-02-09 22:41:12] 2026-02-10 03:40:41,712 | INFO     | [payload] control thread has finished
[2026-02-09 22:41:12] 2026-02-10 03:40:41,856 | INFO     | [job] create_data_payload thread has finished
[2026-02-09 22:41:12] 2026-02-10 03:40:41,907 | INFO     | [payload] execute_payloads thread has finished
[2026-02-09 22:41:12] 2026-02-10 03:40:42,126 | INFO     | [job] queue monitor thread has finished
[2026-02-09 22:41:12] 2026-02-10 03:40:42,251 | INFO     | [job] control thread has finished
[2026-02-09 22:41:12] 2026-02-10 03:40:42,339 | INFO     | [payload] failed_post thread has finished
[2026-02-09 22:41:12] 2026-02-10 03:40:42,649 | INFO     | [payload] validate_post thread has finished
[2026-02-09 22:41:12] 2026-02-10 03:40:43,348 | INFO     | [data] copytool_out thread has finished
[2026-02-09 22:41:12] 2026-02-10 03:40:45,547 | INFO     | [data] queue_monitor thread has finished
[2026-02-09 22:41:12] 2026-02-10 03:40:50,750 | INFO     | job.realtimelogging is not enabled
[2026-02-09 22:41:12] 2026-02-10 03:40:51,755 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-09 22:41:12] 2026-02-10 03:40:55,682 | INFO     | [monitor] cgroup control has ended
[2026-02-09 22:41:12] 2026-02-10 03:40:57,288 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140670291416896)>', '<ExcThread(monitor, started 140669943265024)>']
[2026-02-09 22:41:12] 2026-02-10 03:41:02,314 | INFO     | all workflow threads have been joined
[2026-02-09 22:41:12] 2026-02-10 03:41:02,329 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-09 22:41:12] 2026-02-10 03:41:02,329 | INFO     | traces error code: 0
[2026-02-09 22:41:12] 2026-02-10 03:41:02,330 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-09 22:41:12] 2026-02-10 03:41:10,843 | INFO     | PID=2978756 has CPU usage=8.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-09 22:41:12] 2026-02-10 03:41:10,844 | INFO     | .. there are 62 such processes running
[2026-02-09 22:41:12] 2026-02-10 03:41:10,844 | INFO     | found 0 job(s) in 20 queues
[2026-02-09 22:41:12] 2026-02-10 03:41:10,844 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-09 22:41:12] 2026-02-10 03:41:10,844 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-09 22:41:12] 2026-02-10 03:41:10,844 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-09 22:41:12] 2026-02-10 03:41:10,844 | INFO     | [monitor] control thread has ended
[2026-02-09 22:41:12] 2026-02-10 03:41:11,839 [wrapper] ==== pilot stdout END ====
[2026-02-09 22:41:12] 2026-02-10 03:41:11,842 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-09 22:41:12] 2026-02-10 03:41:11,900 [wrapper] pilotpid: 2978756
[2026-02-09 22:41:12] 2026-02-10 03:41:11,919 [wrapper] Pilot exit status: 0
[2026-02-09 22:41:12] 2026-02-10 03:41:11,942 [wrapper] pandaids: 6996651041
[2026-02-09 22:41:12] 2026-02-10 03:41:12,082 [wrapper] cleanup supervisor_pilot 3464750 2978757
[2026-02-09 22:41:12] 2026-02-10 03:41:12,087 [wrapper] Test setup, not cleaning
[2026-02-09 22:41:12] 2026-02-10 03:41:12,090 [wrapper] apfmon messages muted
[2026-02-09 22:41:12] 2026-02-10 03:41:12,098 [wrapper] ==== wrapper stdout END ====
[2026-02-09 22:41:12] 2026-02-10 03:41:12,115 [wrapper] ==== wrapper stderr END ====
[2026-02-09 22:41:12]  *** Error codes and diagnostics ***
[2026-02-09 22:41:12]     "exeErrorCode": 0,
[2026-02-09 22:41:12]     "exeErrorDiag": "",
[2026-02-09 22:41:12]     "pilotErrorCode": 0,
[2026-02-09 22:41:12]     "pilotErrorDiag": "",
[2026-02-09 22:41:12]  *** Listing of results directory ***
[2026-02-09 22:41:12] total 668632
[2026-02-09 22:41:12] -rw-r--r--. 1 boincer umatlas    584422 Feb  2 05:55 pilot3.tar.gz
[2026-02-09 22:41:12] -rwx------. 1 boincer umatlas     36322 Feb  2 05:57 runpilot2-wrapper.sh
[2026-02-09 22:41:12] -rw-r--r--. 1 boincer umatlas      5111 Feb  2 05:58 queuedata.json
[2026-02-09 22:41:12] -rw-r--r--. 1 boincer umatlas       100 Feb  9 21:40 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-09 22:41:12] -rwxr-xr-x. 1 boincer umatlas      7986 Feb  9 21:40 run_atlas
[2026-02-09 22:41:12] -rw-r--r--. 1 boincer umatlas       105 Feb  9 21:40 job.xml
[2026-02-09 22:41:12] -rw-r--r--. 2 boincer umatlas 498157875 Feb  9 21:40 EVNT.48317929._000255.pool.root.1
[2026-02-09 22:41:12] -rw-r--r--. 2 boincer umatlas     15845 Feb  9 21:40 start_atlas.sh
[2026-02-09 22:41:12] drwxrwx--x. 2 boincer umatlas      4096 Feb  9 21:40 shared
[2026-02-09 22:41:12] -rw-r--r--. 2 boincer umatlas    597746 Feb  9 21:40 input.tar.gz
[2026-02-09 22:41:12] -rw-r--r--. 1 boincer umatlas         0 Feb  9 21:40 boinc_lockfile
[2026-02-09 22:41:12] -rw-r--r--. 1 boincer umatlas      2512 Feb  9 21:40 pandaJob.out
[2026-02-09 22:41:12] -rw-------. 1 boincer umatlas        57 Feb  9 21:40 setup.sh.local
[2026-02-09 22:41:12] -rw-------. 1 boincer umatlas   1009496 Feb  9 21:41 agis_schedconf.cvmfs.json
[2026-02-09 22:41:12] -rw-------. 1 boincer umatlas   1513144 Feb  9 21:41 agis_ddmendpoints.agis.ALL.json
[2026-02-09 22:41:12] -rw-------. 1 boincer umatlas       432 Feb  9 21:41 workernode_map.json
[2026-02-09 22:41:12] drwx------. 5 boincer umatlas      4096 Feb  9 21:41 pilot3
[2026-02-09 22:41:12] -rw-r--r--. 1 boincer umatlas      7185 Feb  9 22:36 init_data.xml
[2026-02-09 22:41:12] -rw-------. 1 boincer umatlas 180977528 Feb  9 22:39 HITS.48317931._014022.pool.root.1
[2026-02-09 22:41:12] -rw-r--r--. 1 boincer umatlas       531 Feb  9 22:39 boinc_task_state.xml
[2026-02-09 22:41:12] -rw-------. 1 boincer umatlas      1048 Feb  9 22:40 memory_monitor_summary.json
[2026-02-09 22:41:12] -rw-------. 1 boincer umatlas    310020 Feb  9 22:40 log.48317931._014022.job.log.tgz.1
[2026-02-09 22:41:12] -rw-------. 1 boincer umatlas        95 Feb  9 22:40 pilot_heartbeat.json
[2026-02-09 22:41:12] -rw-------. 1 boincer umatlas      6366 Feb  9 22:40 heartbeat.json
[2026-02-09 22:41:12] -rw-r--r--. 1 boincer umatlas      8192 Feb  9 22:41 boinc_mmap_file
[2026-02-09 22:41:12] -rw-r--r--. 1 boincer umatlas        27 Feb  9 22:41 wrapper_checkpoint.txt
[2026-02-09 22:41:12] -rw-------. 1 boincer umatlas       823 Feb  9 22:41 pilotlog.txt
[2026-02-09 22:41:12] -rw-------. 1 boincer umatlas    503470 Feb  9 22:41 log.48317931._014022.job.log.1
[2026-02-09 22:41:12] -rw-------. 1 boincer umatlas       357 Feb  9 22:41 output.list
[2026-02-09 22:41:12] -rw-r--r--. 1 boincer umatlas       620 Feb  9 22:41 runtime_log
[2026-02-09 22:41:12] -rw-------. 1 boincer umatlas    829440 Feb  9 22:41 result.tar.gz
[2026-02-09 22:41:12] -rw-------. 1 boincer umatlas       657 Feb  9 22:41 UbqKDmOn668n9Rq4apOajLDm4fhM0noT9bVooX4SDmwDSKDm65ZhPm.diag
[2026-02-09 22:41:12] -rw-r--r--. 1 boincer umatlas      9341 Feb  9 22:41 runtime_log.err
[2026-02-09 22:41:12] -rw-r--r--. 1 boincer umatlas      2075 Feb  9 22:41 stderr.txt
[2026-02-09 22:41:12] HITS file was successfully produced:
[2026-02-09 22:41:12] -rw-------. 1 boincer umatlas 180977528 Feb  9 22:39 shared/HITS.pool.root.1
[2026-02-09 22:41:12]  *** Contents of shared directory: ***
[2026-02-09 22:41:12] total 664640
[2026-02-09 22:41:12] -rw-r--r--. 2 boincer umatlas 498157875 Feb  9 21:40 ATLAS.root_0
[2026-02-09 22:41:12] -rw-r--r--. 2 boincer umatlas     15845 Feb  9 21:40 start_atlas.sh
[2026-02-09 22:41:12] -rw-r--r--. 2 boincer umatlas    597746 Feb  9 21:40 input.tar.gz
[2026-02-09 22:41:12] -rw-------. 1 boincer umatlas 180977528 Feb  9 22:39 HITS.pool.root.1
[2026-02-09 22:41:12] -rw-------. 1 boincer umatlas    829440 Feb  9 22:41 result.tar.gz
22:41:13 (2966309): run_atlas exited; CPU time 22050.271312
22:41:13 (2966309): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN