Stderr output

<core_client_version>7.18.1</core_client_version>
<![CDATA[
<stderr_txt>
23:31:02 (45528): wrapper (7.7.26015): starting
23:31:02 (45528): wrapper: running run_atlas (--nthreads 6)
[2026-02-11 23:31:02] Arguments: --nthreads 6
[2026-02-11 23:31:02] Threads: 6
[2026-02-11 23:31:02] Checking for CVMFS
[2026-02-11 23:31:05] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-11 23:31:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-11 23:31:05] Running cvmfs_config stat atlas.cern.ch
[2026-02-11 23:31:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-11 23:31:05] 2.11.5.0 32068 3 43312 156131 0 186 2644421 4194304 909 130560 0 36891 99.959 2872 840 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.3.250:3128 1
[2026-02-11 23:31:05] CVMFS is ok
[2026-02-11 23:31:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-11 23:31:05] Checking for apptainer binary...
[2026-02-11 23:31:05] apptainer is not installed, using version from CVMFS
[2026-02-11 23:31:05] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-11 23:31:05] boinc-b450f
[2026-02-11 23:31:05] apptainer works
[2026-02-11 23:31:05] Set ATHENA_PROC_NUMBER=6
[2026-02-11 23:31:05] Set ATHENA_CORE_NUMBER=6
[2026-02-11 23:31:05] Starting ATLAS job with PandaID=7009369468
[2026-02-11 23:31:05] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/13 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-12 01:22:32]  *** The last 200 lines of the pilot log: ***
[2026-02-12 01:22:32] 2026-02-12 00:21:25,604 | INFO     | monitor loop #505: job 0:7009369468 is in state 'finished'
[2026-02-12 01:22:32] 2026-02-12 00:21:25,604 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-12 01:22:32] 2026-02-12 00:21:26,261 | INFO     | job 7009369468 has state=finished
[2026-02-12 01:22:32] 2026-02-12 00:21:26,261 | INFO     | preparing for final server update for job 7009369468 in state='finished'
[2026-02-12 01:22:32] 2026-02-12 00:21:26,262 | INFO     | reading metadata from: /var/lib/boinc-client/slots/13/PanDA_Pilot-7009369468/jobReport.json
[2026-02-12 01:22:32] 2026-02-12 00:21:26,263 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/13/workernode_map.json
[2026-02-12 01:22:32] 2026-02-12 00:21:26,263 | INFO     | this job has now completed (state=finished)
[2026-02-12 01:22:32] 2026-02-12 00:21:26,263 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-12 01:22:32] 2026-02-12 00:21:26,263 | INFO     | log transfer has been attempted: DONE
[2026-02-12 01:22:32] 2026-02-12 00:21:26,263 | INFO     | job 7009369468 has finished - writing final server update
[2026-02-12 01:22:32] 2026-02-12 00:21:26,264 | INFO     | total number of processed events: 400 (read)
[2026-02-12 01:22:32] 2026-02-12 00:21:26,266 | INFO     | using path: /var/lib/boinc-client/slots/13/PanDA_Pilot-7009369468/memory_monitor_summary.json (trf name=prmon)
[2026-02-12 01:22:32] 2026-02-12 00:21:26,267 | INFO     | extracted standard info from prmon json
[2026-02-12 01:22:32] 2026-02-12 00:21:26,267 | INFO     | extracted standard memory fields from prmon json
[2026-02-12 01:22:32] 2026-02-12 00:21:26,267 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-12 01:22:32] 2026-02-12 00:21:26,267 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-12 01:22:32] 2026-02-12 00:21:26,267 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-12 01:22:32] 2026-02-12 00:21:26,268 | INFO     | fitting pss+swap vs Time
[2026-02-12 01:22:32] 2026-02-12 00:21:26,269 | INFO     | sum of square deviations: 390582207.0
[2026-02-12 01:22:32] 2026-02-12 00:21:26,269 | INFO     | sum of deviations: -2806923051.999998
[2026-02-12 01:22:32] 2026-02-12 00:21:26,269 | INFO     | mean x: 1770852355.5
[2026-02-12 01:22:32] 2026-02-12 00:21:26,269 | INFO     | mean y: 2494561.703703704
[2026-02-12 01:22:32] 2026-02-12 00:21:26,269 | INFO     | intersect: 12728743247.01938
[2026-02-12 01:22:32] 2026-02-12 00:21:26,269 | INFO     | chi2: 1.205602076190845
[2026-02-12 01:22:32] 2026-02-12 00:21:26,270 | INFO     | sum of square deviations: 338804492.0
[2026-02-12 01:22:32] 2026-02-12 00:21:26,270 | INFO     | sum of deviations: -2393863442.9999986
[2026-02-12 01:22:32] 2026-02-12 00:21:26,270 | INFO     | mean x: 1770852203.0
[2026-02-12 01:22:32] 2026-02-12 00:21:26,270 | INFO     | mean y: 2495777.3883495145
[2026-02-12 01:22:32] 2026-02-12 00:21:26,270 | INFO     | intersect: 12514662681.355232
[2026-02-12 01:22:32] 2026-02-12 00:21:26,270 | INFO     | chi2: 1.205825410442833
[2026-02-12 01:22:32] 2026-02-12 00:21:26,270 | INFO     | current chi2=1.205825410442833 (change=-0.018524706982388815 %)
[2026-02-12 01:22:32] 2026-02-12 00:21:26,271 | INFO     | right removable region: 102
[2026-02-12 01:22:32] 2026-02-12 00:21:26,271 | INFO     | sum of square deviations: 338804492.0
[2026-02-12 01:22:32] 2026-02-12 00:21:26,271 | INFO     | sum of deviations: -13210911154.000004
[2026-02-12 01:22:32] 2026-02-12 00:21:26,271 | INFO     | mean x: 1770852508.0
[2026-02-12 01:22:32] 2026-02-12 00:21:26,271 | INFO     | mean y: 2524175.5436893203
[2026-02-12 01:22:32] 2026-02-12 00:21:26,271 | INFO     | intersect: 69052893053.25644
[2026-02-12 01:22:32] 2026-02-12 00:21:26,271 | INFO     | chi2: 0.07256370918483372
[2026-02-12 01:22:32] 2026-02-12 00:21:26,272 | INFO     | current chi2=0.07256370918483372 (change=93.98112274208236 %)
[2026-02-12 01:22:32] 2026-02-12 00:21:26,272 | INFO     | sum of square deviations: 291817564.5
[2026-02-12 01:22:32] 2026-02-12 00:21:26,272 | INFO     | sum of deviations: -11355661759.5
[2026-02-12 01:22:32] 2026-02-12 00:21:26,272 | INFO     | mean x: 1770852660.5
[2026-02-12 01:22:32] 2026-02-12 00:21:26,272 | INFO     | mean y: 2518118.275510204
[2026-02-12 01:22:32] 2026-02-12 00:21:26,272 | INFO     | intersect: 68912708198.86159
[2026-02-12 01:22:32] 2026-02-12 00:21:26,272 | INFO     | chi2: 0.07207203179013962
[2026-02-12 01:22:32] 2026-02-12 00:21:26,273 | INFO     | current chi2=0.07207203179013962 (change=0.6775802949125848 %)
[2026-02-12 01:22:32] 2026-02-12 00:21:26,273 | INFO     | left removable region: 20
[2026-02-12 01:22:32] 2026-02-12 00:21:26,273 | INFO     | sum of square deviations: 170944600.5
[2026-02-12 01:22:32] 2026-02-12 00:21:26,273 | INFO     | sum of deviations: -5287290533.999999
[2026-02-12 01:22:32] 2026-02-12 00:21:26,273 | INFO     | mean x: 1770852782.5
[2026-02-12 01:22:32] 2026-02-12 00:21:26,273 | INFO     | mean y: 2498988.7317073173
[2026-02-12 01:22:32] 2026-02-12 00:21:26,273 | INFO     | intersect: 54774706631.63885
[2026-02-12 01:22:32] 2026-02-12 00:21:26,273 | INFO     | chi2: 0.04839438421051963
[2026-02-12 01:22:32] 2026-02-12 00:21:26,274 | INFO     | current memory leak: -30.93 B/s (using 82 data points, chi2=0.05)
[2026-02-12 01:22:32] 2026-02-12 00:21:26,274 | INFO     | could have reported an average CPU frequency of 3908 MHz (7 samples)
[2026-02-12 01:22:32] 2026-02-12 00:21:26,274 | INFO     | ..............................
[2026-02-12 01:22:32] 2026-02-12 00:21:26,274 | INFO     | . Timing measurements:
[2026-02-12 01:22:32] 2026-02-12 00:21:26,274 | INFO     | . get job = 0 s
[2026-02-12 01:22:32] 2026-02-12 00:21:26,274 | INFO     | . initial setup = 5 s
[2026-02-12 01:22:32] 2026-02-12 00:21:26,274 | INFO     | . payload setup = 2 s
[2026-02-12 01:22:32] 2026-02-12 00:21:26,274 | INFO     | . stage-in = 0 s
[2026-02-12 01:22:32] 2026-02-12 00:21:26,274 | INFO     | . payload execution = 6588 s
[2026-02-12 01:22:32] 2026-02-12 00:21:26,274 | INFO     | . stage-out = 0 s
[2026-02-12 01:22:32] 2026-02-12 00:21:26,274 | INFO     | . log creation = 0 s
[2026-02-12 01:22:32] 2026-02-12 00:21:26,275 | INFO     | ..............................
[2026-02-12 01:22:32] 2026-02-12 00:21:26,706 | INFO     | time since job start (6610s) is within the limit (349056.0s)
[2026-02-12 01:22:32] 2026-02-12 00:21:26,794 | INFO     | 
[2026-02-12 01:22:32] 2026-02-12 00:21:26,795 | INFO     | job summary report
[2026-02-12 01:22:32] 2026-02-12 00:21:26,795 | INFO     | --------------------------------------------------
[2026-02-12 01:22:32] 2026-02-12 00:21:26,795 | INFO     | PanDA job id: 7009369468
[2026-02-12 01:22:32] 2026-02-12 00:21:26,795 | INFO     | task id: 48431096
[2026-02-12 01:22:32] 2026-02-12 00:21:26,795 | INFO     | errors: (none)
[2026-02-12 01:22:32] 2026-02-12 00:21:26,795 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-12 01:22:32] 2026-02-12 00:21:26,795 | INFO     | pilot state: finished 
[2026-02-12 01:22:32] 2026-02-12 00:21:26,795 | INFO     | transexitcode: 0
[2026-02-12 01:22:32] 2026-02-12 00:21:26,795 | INFO     | exeerrorcode: 0
[2026-02-12 01:22:32] 2026-02-12 00:21:26,795 | INFO     | exeerrordiag: 
[2026-02-12 01:22:32] 2026-02-12 00:21:26,795 | INFO     | exitcode: 0
[2026-02-12 01:22:32] 2026-02-12 00:21:26,795 | INFO     | exitmsg: OK
[2026-02-12 01:22:32] 2026-02-12 00:21:26,795 | INFO     | cpuconsumptiontime: 38324 s
[2026-02-12 01:22:32] 2026-02-12 00:21:26,795 | INFO     | nevents: 400
[2026-02-12 01:22:32] 2026-02-12 00:21:26,795 | INFO     | neventsw: 0
[2026-02-12 01:22:32] 2026-02-12 00:21:26,795 | INFO     | pid: 56236
[2026-02-12 01:22:32] 2026-02-12 00:21:26,795 | INFO     | pgrp: 56236
[2026-02-12 01:22:32] 2026-02-12 00:21:26,796 | INFO     | corecount: 6
[2026-02-12 01:22:32] 2026-02-12 00:21:26,796 | INFO     | event service: False
[2026-02-12 01:22:32] 2026-02-12 00:21:26,796 | INFO     | sizes: {0: 2281788, 1: 2282249, 11: 2282249, 6594: 2309511, 6595: 2309510, 6597: 2318764, 6599: 2318902}
[2026-02-12 01:22:32] 2026-02-12 00:21:26,796 | INFO     | --------------------------------------------------
[2026-02-12 01:22:32] 2026-02-12 00:21:26,796 | INFO     | 
[2026-02-12 01:22:32] 2026-02-12 00:21:26,796 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/13
[2026-02-12 01:22:32] 2026-02-12 00:21:26,805 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-12 01:22:32] 2026-02-12 00:21:26,806 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-12 01:22:32] 2026-02-12 00:21:26,806 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-12 01:22:32] 2026-02-12 00:21:26,806 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-12 01:22:32] 2026-02-12 00:21:26,806 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-12 01:22:32] 2026-02-12 00:21:26,806 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-12 01:22:32] 2026-02-12 00:21:26,806 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-12 01:22:32] 2026-02-12 00:21:26,806 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-12 01:22:32] 2026-02-12 00:21:26,806 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-12 01:22:32] 2026-02-12 00:21:26,806 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-12 01:22:32] 2026-02-12 00:21:26,806 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-12 01:22:32] 2026-02-12 00:21:26,806 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-12 01:22:32] 2026-02-12 00:21:26,807 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-12 01:22:32] 2026-02-12 00:21:26,807 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-12 01:22:32] 2026-02-12 00:21:26,807 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-12 01:22:32] 2026-02-12 00:21:26,807 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-12 01:22:32] 2026-02-12 00:21:26,807 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-12 01:22:32] 2026-02-12 00:21:26,807 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-12 01:22:32] 2026-02-12 00:21:26,807 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-12 01:22:32] 2026-02-12 00:21:26,807 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-12 01:22:32] 2026-02-12 00:21:26,807 | INFO     | job 7009369468 has completed (purged errors)
[2026-02-12 01:22:32] 2026-02-12 00:21:26,807 | INFO     | overall cleanup function is called
[2026-02-12 01:22:32] 2026-02-12 00:21:27,810 | INFO     | --- collectZombieJob: --- 10, [56236]
[2026-02-12 01:22:32] 2026-02-12 00:21:27,810 | INFO     | zombie collector waiting for pid 56236
[2026-02-12 01:22:32] 2026-02-12 00:21:27,810 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-12 01:22:32] 2026-02-12 00:21:27,811 | INFO     | collected zombie processes
[2026-02-12 01:22:32] 2026-02-12 00:21:27,811 | INFO     | will attempt to kill all subprocesses of pid=56236
[2026-02-12 01:22:32] 2026-02-12 00:21:27,895 | INFO     | process IDs to be killed: [56236] (in reverse order)
[2026-02-12 01:22:32] 2026-02-12 00:21:27,925 | WARNING  | found no corresponding commands to process id(s)
[2026-02-12 01:22:32] 2026-02-12 00:21:27,925 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-12 01:22:32] 2026-02-12 00:21:27,927 | INFO     | did not find any defunct processes belonging to 56236
[2026-02-12 01:22:32] 2026-02-12 00:21:27,929 | INFO     | did not find any defunct processes belonging to 56236
[2026-02-12 01:22:32] 2026-02-12 00:21:27,929 | INFO     | ready for new job
[2026-02-12 01:22:32] 2026-02-12 00:21:27,929 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-12 01:22:32] 2026-02-12 00:21:27,930 | INFO     | **************************************
[2026-02-12 01:22:32] 2026-02-12 00:21:27,930 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-12 01:22:32] 2026-02-12 00:21:27,930 | INFO     | **************************************
[2026-02-12 01:22:32] 2026-02-12 00:21:27,930 | INFO     | 
[2026-02-12 01:22:32] 2026-02-12 00:21:27,931 | INFO     | architecture information:
[2026-02-12 01:22:32] 2026-02-12 00:21:27,931 | INFO     | executing command: cat /etc/os-release
[2026-02-12 01:22:32] 2026-02-12 00:21:27,938 | INFO     | cat /etc/os-release:
[2026-02-12 01:22:32] NAME="CentOS Linux"
[2026-02-12 01:22:32] VERSION="7 (Core)"
[2026-02-12 01:22:32] ID="centos"
[2026-02-12 01:22:32] ID_LIKE="rhel fedora"
[2026-02-12 01:22:32] VERSION_ID="7"
[2026-02-12 01:22:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-12 01:22:32] ANSI_COLOR="0;31"
[2026-02-12 01:22:32] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-12 01:22:32] HOME_URL="https://www.centos.org/"
[2026-02-12 01:22:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-12 01:22:32] 
[2026-02-12 01:22:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-12 01:22:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-12 01:22:32] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-12 01:22:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-12 01:22:32] 
[2026-02-12 01:22:32] 2026-02-12 00:21:27,939 | INFO     | **************************************
[2026-02-12 01:22:32] 2026-02-12 00:21:28,441 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/13
[2026-02-12 01:22:32] 2026-02-12 00:21:28,450 | INFO     | sufficient remaining disk space (16600006656 B)
[2026-02-12 01:22:32] 2026-02-12 00:21:28,450 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-12 01:22:32] 2026-02-12 00:21:28,450 | INFO     | current server update state: UPDATING_FINAL
[2026-02-12 01:22:32] 2026-02-12 00:21:28,450 | INFO     | update_server=False
[2026-02-12 01:22:32] 2026-02-12 00:21:28,450 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-12 01:22:32] 2026-02-12 00:21:28,450 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-02-12 01:22:32] 2026-02-12 00:21:28,450 | INFO     | found 0 job(s) in 20 queues
[2026-02-12 01:22:32] 2026-02-12 00:21:28,450 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-12 01:22:32] 2026-02-12 00:21:28,451 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-12 01:22:32] 2026-02-12 00:21:28,954 | INFO     | all data control threads have been joined
[2026-02-12 01:22:32] 2026-02-12 00:21:29,110 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-12 01:22:32] 2026-02-12 00:21:29,111 | INFO     | aborting loop
[2026-02-12 01:22:32] 2026-02-12 00:21:29,419 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-12 01:22:32] 2026-02-12 00:21:29,450 | INFO     | [job] retrieve thread has finished
[2026-02-12 01:22:32] 2026-02-12 00:21:29,619 | INFO     | all payload control threads have been joined
[2026-02-12 01:22:32] 2026-02-12 00:21:29,740 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-12 01:22:32] 2026-02-12 00:21:29,959 | INFO     | [data] control thread has finished
[2026-02-12 01:22:32] 2026-02-12 00:21:29,977 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-12 01:22:32] 2026-02-12 00:21:30,011 | INFO     | [payload] execute_payloads thread has finished
[2026-02-12 01:22:32] 2026-02-12 00:21:30,014 | INFO     | all job control threads have been joined
[2026-02-12 01:22:32] 2026-02-12 00:21:30,116 | INFO     | [job] job monitor thread has finished
[2026-02-12 01:22:32] 2026-02-12 00:21:30,227 | INFO     | [job] create_data_payload thread has finished
[2026-02-12 01:22:32] 2026-02-12 00:21:30,310 | INFO     | [data] copytool_in thread has finished
[2026-02-12 01:22:32] 2026-02-12 00:21:30,313 | INFO     | [job] validate thread has finished
[2026-02-12 01:22:32] 2026-02-12 00:21:30,319 | INFO     | [payload] validate_pre thread has finished
[2026-02-12 01:22:32] 2026-02-12 00:21:30,442 | INFO     | [payload] failed_post thread has finished
[2026-02-12 01:22:32] 2026-02-12 00:21:30,622 | INFO     | [payload] control thread has finished
[2026-02-12 01:22:32] 2026-02-12 00:21:30,991 | INFO     | [payload] validate_post thread has finished
[2026-02-12 01:22:32] 2026-02-12 00:21:31,014 | INFO     | [job] control thread has finished
[2026-02-12 01:22:32] 2026-02-12 00:21:31,346 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-12 01:22:32] 2026-02-12 00:21:31,422 | INFO     | [data] copytool_out thread has finished
[2026-02-12 01:22:32] 2026-02-12 00:21:32,350 | INFO     | [job] queue monitor thread has finished
[2026-02-12 01:22:32] 2026-02-12 00:21:33,980 | INFO     | [data] queue_monitor thread has finished
[2026-02-12 01:22:32] 2026-02-12 00:22:27,080 | INFO     | [monitor] cgroup control has ended
[2026-02-12 01:22:32] 2026-02-12 00:22:27,396 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140166986999616)>', '<ExcThread(monitor, started 140166274455296)>']
[2026-02-12 01:22:32] 2026-02-12 00:22:27,710 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-12 01:22:32] 2026-02-12 00:22:27,711 | INFO     | [monitor] control thread has ended
[2026-02-12 01:22:32] 2026-02-12 00:22:32,399 | INFO     | all workflow threads have been joined
[2026-02-12 01:22:32] 2026-02-12 00:22:32,400 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-12 01:22:32] 2026-02-12 00:22:32,400 | INFO     | traces error code: 0
[2026-02-12 01:22:32] 2026-02-12 00:22:32,400 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-12 01:22:32] 2026-02-12 00:22:32,468 [wrapper] ==== pilot stdout END ====
[2026-02-12 01:22:32] 2026-02-12 00:22:32,469 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-12 01:22:32] 2026-02-12 00:22:32,470 [wrapper] pilotpid: 50372
[2026-02-12 01:22:32] 2026-02-12 00:22:32,472 [wrapper] Pilot exit status: 0
[2026-02-12 01:22:32] 2026-02-12 00:22:32,479 [wrapper] pandaids: 7009369468
[2026-02-12 01:22:32] 2026-02-12 00:22:32,494 [wrapper] cleanup supervisor_pilot  136242 50373
[2026-02-12 01:22:32] 2026-02-12 00:22:32,495 [wrapper] Test setup, not cleaning
[2026-02-12 01:22:32] 2026-02-12 00:22:32,496 [wrapper] apfmon messages muted
[2026-02-12 01:22:32] 2026-02-12 00:22:32,498 [wrapper] ==== wrapper stdout END ====
[2026-02-12 01:22:32] 2026-02-12 00:22:32,499 [wrapper] ==== wrapper stderr END ====
[2026-02-12 01:22:32]  *** Error codes and diagnostics ***
[2026-02-12 01:22:32]     "exeErrorCode": 0,
[2026-02-12 01:22:32]     "exeErrorDiag": "",
[2026-02-12 01:22:32]     "pilotErrorCode": 0,
[2026-02-12 01:22:32]     "pilotErrorDiag": "",
[2026-02-12 01:22:32]  *** Listing of results directory ***
[2026-02-12 01:22:32] total 942281
[2026-02-12 01:22:32] -rw-r--r-- 1 boinc boinc    584627 Feb  9 21:26 pilot3.tar.gz
[2026-02-12 01:22:32] -rwx------ 1 boinc boinc     36322 Feb  9 21:28 runpilot2-wrapper.sh
[2026-02-12 01:22:32] -rw-r--r-- 1 boinc boinc      5111 Feb  9 21:28 queuedata.json
[2026-02-12 01:22:32] -rw-r--r-- 1 boinc boinc       100 Feb 11 23:31 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-12 01:22:32] -rwxr-xr-x 1 boinc boinc      7986 Feb 11 23:31 run_atlas
[2026-02-12 01:22:32] -rw-r--r-- 1 boinc boinc       105 Feb 11 23:31 job.xml
[2026-02-12 01:22:32] -rw-r--r-- 1 boinc boinc      6796 Feb 11 23:31 init_data.xml
[2026-02-12 01:22:32] -rw-r--r-- 2 boinc boinc 678948267 Feb 11 23:31 EVNT.48431094._000409.pool.root.1
[2026-02-12 01:22:32] -rw-r--r-- 2 boinc boinc     15845 Feb 11 23:31 start_atlas.sh
[2026-02-12 01:22:32] drwxrwx--x 2 boinc boinc         5 Feb 11 23:31 shared
[2026-02-12 01:22:32] -rw-r--r-- 2 boinc boinc    597958 Feb 11 23:31 input.tar.gz
[2026-02-12 01:22:32] -rw-r--r-- 1 boinc boinc         0 Feb 11 23:31 boinc_lockfile
[2026-02-12 01:22:32] -rw-r--r-- 1 boinc boinc      2555 Feb 11 23:31 pandaJob.out
[2026-02-12 01:22:32] -rw------- 1 boinc boinc        56 Feb 11 23:31 setup.sh.local
[2026-02-12 01:22:32] -rw------- 1 boinc boinc   1005065 Feb 11 23:31 agis_schedconf.cvmfs.json
[2026-02-12 01:22:32] -rw------- 1 boinc boinc   1512955 Feb 11 23:31 agis_ddmendpoints.agis.ALL.json
[2026-02-12 01:22:32] -rw------- 1 boinc boinc       424 Feb 11 23:31 workernode_map.json
[2026-02-12 01:22:32] drwx------ 5 boinc boinc        22 Feb 11 23:31 pilot3
[2026-02-12 01:22:32] -rw------- 1 boinc boinc 283563198 Feb 12 01:20 HITS.48431096._019283.pool.root.1
[2026-02-12 01:22:32] -rw------- 1 boinc boinc        95 Feb 12 01:21 pilot_heartbeat.json
[2026-02-12 01:22:32] -rw-r--r-- 1 boinc boinc       530 Feb 12 01:21 boinc_task_state.xml
[2026-02-12 01:22:32] -rw------- 1 boinc boinc      1026 Feb 12 01:21 memory_monitor_summary.json
[2026-02-12 01:22:32] -rw------- 1 boinc boinc    334558 Feb 12 01:21 log.48431096._019283.job.log.tgz.1
[2026-02-12 01:22:32] -rw------- 1 boinc boinc      6305 Feb 12 01:21 heartbeat.json
[2026-02-12 01:22:32] -rw-r--r-- 1 boinc boinc      8192 Feb 12 01:22 boinc_mmap_file
[2026-02-12 01:22:32] -rw-r--r-- 1 boinc boinc        27 Feb 12 01:22 wrapper_checkpoint.txt
[2026-02-12 01:22:32] -rw------- 1 boinc boinc      4556 Feb 12 01:22 pilotlog.txt
[2026-02-12 01:22:32] -rw------- 1 boinc boinc    975227 Feb 12 01:22 log.48431096._019283.job.log.1
[2026-02-12 01:22:32] -rw-r--r-- 1 boinc boinc       620 Feb 12 01:22 runtime_log
[2026-02-12 01:22:32] -rw------- 1 boinc boinc   1331200 Feb 12 01:22 result.tar.gz
[2026-02-12 01:22:32] -rw------- 1 boinc boinc       357 Feb 12 01:22 output.list
[2026-02-12 01:22:32] -rw-r--r-- 1 boinc boinc      9481 Feb 12 01:22 runtime_log.err
[2026-02-12 01:22:32] -rw------- 1 boinc boinc       658 Feb 12 01:22 7n2LDmu2m98nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmKWgKDmaaQumn.diag
[2026-02-12 01:22:32] -rw-r--r-- 1 boinc boinc     20939 Feb 12 01:22 stderr.txt
[2026-02-12 01:22:32] HITS file was successfully produced:
[2026-02-12 01:22:32] -rw------- 1 boinc boinc 283563198 Feb 12 01:20 shared/HITS.pool.root.1
[2026-02-12 01:22:32]  *** Contents of shared directory: ***
[2026-02-12 01:22:32] total 941141
[2026-02-12 01:22:32] -rw-r--r-- 2 boinc boinc 678948267 Feb 11 23:31 ATLAS.root_0
[2026-02-12 01:22:32] -rw-r--r-- 2 boinc boinc     15845 Feb 11 23:31 start_atlas.sh
[2026-02-12 01:22:32] -rw-r--r-- 2 boinc boinc    597958 Feb 11 23:31 input.tar.gz
[2026-02-12 01:22:32] -rw------- 1 boinc boinc 283563198 Feb 12 01:20 HITS.pool.root.1
[2026-02-12 01:22:32] -rw------- 1 boinc boinc   1331200 Feb 12 01:22 result.tar.gz
01:22:34 (45528): run_atlas exited; CPU time 38412.129671
01:22:34 (45528): called boinc_finish(0)

</stderr_txt>
]]>

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