Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-02-10 11:16:12 (21392): vboxwrapper version 26210
2026-02-10 11:16:12 (21392): BOINC client version: 8.2.8
2026-02-10 11:16:16 (21392): Detected: VirtualBox VboxManage Interface (Version: 7.2.4)
2026-02-10 11:16:16 (21392): Successfully copied 'init_data.xml' to the shared directory.
2026-02-10 11:16:16 (21392): Create VM. (boinc_24af540e93f722f7, slot#2)
2026-02-10 11:16:17 (21392): Setting Memory Size for VM. (4300MB)
2026-02-10 11:16:17 (21392): Setting CPU Count for VM. (3)
2026-02-10 11:16:17 (21392): Setting Chipset Options for VM.
2026-02-10 11:16:17 (21392): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-02-10 11:16:18 (21392): Setting Boot Options for VM.
2026-02-10 11:16:18 (21392): Setting Network Configuration for NAT. (Driver: virtio)
2026-02-10 11:16:19 (21392): Enabling VM Network Access.
2026-02-10 11:16:19 (21392): Disabling USB Support for VM.
2026-02-10 11:16:19 (21392): Disabling COM Port Support for VM.
2026-02-10 11:16:19 (21392): Disabling LPT Port Support for VM.
2026-02-10 11:16:20 (21392): Disabling Audio Support for VM.
2026-02-10 11:16:20 (21392): Disabling Clipboard Support for VM.
2026-02-10 11:16:20 (21392): Disabling Drag and Drop Support for VM.
2026-02-10 11:16:20 (21392): Adding storage controller(s) to VM.
2026-02-10 11:16:21 (21392): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-02-10 11:16:23 (21392): Adding VirtualBox Guest Additions to VM.
2026-02-10 11:16:23 (21392): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-02-10 11:16:23 (21392): forwarding host port 61556 to guest port 80
2026-02-10 11:16:24 (21392): Enabling remote desktop for VM.
2026-02-10 11:16:24 (21392): Required extension pack not installed, remote desktop not enabled.
2026-02-10 11:16:24 (21392): Enabling shared directory for VM.
2026-02-10 11:16:24 (21392): Starting VM using VBoxManage interface. (boinc_24af540e93f722f7, slot#2)
2026-02-10 11:16:32 (21392): Successfully started VM. (PID = '14244')
2026-02-10 11:16:32 (21392): Reporting VM Process ID to BOINC.
2026-02-10 11:16:32 (21392): Guest Log: BIOS: VirtualBox 7.2.4
2026-02-10 11:16:32 (21392): Guest Log: CPUID EDX: 0x178bfbff
2026-02-10 11:16:32 (21392): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-02-10 11:16:32 (21392): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-02-10 11:16:32 (21392): VM state change detected. (old = 'poweredoff', new = 'running')
2026-02-10 11:16:32 (21392): Detected: Web Application Enabled (http://localhost:61556)
2026-02-10 11:16:32 (21392): Preference change detected
2026-02-10 11:16:32 (21392): Setting CPU throttle for VM. (60%)
2026-02-10 11:16:32 (21392): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2026-02-10 11:16:34 (21392): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-02-10 11:16:34 (21392): Guest Log: BIOS: Booting from Hard Disk...
2026-02-10 11:16:37 (21392): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-02-10 11:16:37 (21392): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-02-10 11:16:37 (21392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-02-10 11:16:37 (21392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-02-10 11:16:37 (21392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-02-10 11:16:37 (21392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-02-10 11:16:37 (21392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-02-10 11:16:37 (21392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-02-10 11:16:37 (21392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-02-10 11:16:37 (21392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-02-10 11:16:37 (21392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-02-10 11:16:37 (21392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-02-10 11:16:37 (21392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-02-10 11:16:37 (21392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-02-10 11:16:37 (21392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-02-10 11:16:37 (21392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-02-10 11:16:37 (21392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-02-10 11:16:37 (21392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-02-10 11:16:37 (21392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-02-10 11:16:37 (21392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-02-10 11:16:37 (21392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-02-10 11:16:37 (21392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-02-10 11:16:37 (21392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-02-10 11:16:37 (21392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-02-10 11:16:37 (21392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-02-10 11:16:37 (21392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-02-10 11:16:37 (21392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-02-10 11:16:37 (21392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-02-10 11:16:37 (21392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-02-10 11:16:37 (21392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-02-10 11:16:37 (21392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-02-10 11:16:37 (21392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-02-10 11:16:44 (21392): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-02-10 11:16:44 (21392): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-02-10 11:16:53 (21392): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-02-10 11:16:53 (21392): Guest Log: 00:00:00.000128 main     Log opened 2026-02-10T11:16:51.174319000Z
2026-02-10 11:16:53 (21392): Guest Log: 00:00:00.000241 main     OS Product: Linux
2026-02-10 11:16:53 (21392): Guest Log: 00:00:00.000267 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-02-10 11:16:53 (21392): Guest Log: 00:00:00.000287 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-02-10 11:16:53 (21392): Guest Log: 00:00:00.000307 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-02-10 11:16:53 (21392): Guest Log: 00:00:00.000307 main     Process ID: 1294
2026-02-10 11:16:53 (21392): Guest Log: 00:00:00.000308 main     Package type: LINUX_64BITS_GENERIC
2026-02-10 11:16:53 (21392): Guest Log: 00:00:00.001021 main     5.2.32 r132073 started. Verbose level = 0
2026-02-10 11:16:53 (21392): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-02-10 11:16:53 (21392): Guest Log: [INFO] Mounting shared directory
2026-02-10 11:16:53 (21392): Guest Log: [INFO] Checking for init_data.xml
2026-02-10 11:17:01 (21392): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-02-10 11:17:01 (21392): Guest Log: [INFO] Detected branch: prod
2026-02-10 11:17:01 (21392): Guest Log: This is the prod version of the ATLAS job wrapper
2026-02-10 11:17:01 (21392): Guest Log: Copying input files
2026-02-10 11:17:03 (21392): Guest Log: 00:00:10.006436 timesync vgsvcTimeSyncWorker: Radical guest time change: -32 388 105 293 000ns (GuestNow=1 770 689 823 073 646 000 ns GuestLast=1 770 722 211 178 939 000 ns fSetTimeLastLoop=true )
2026-02-10 11:17:08 (21392): Guest Log: Copied input files into RunAtlas.
2026-02-10 11:17:08 (21392): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-02-10 11:17:08 (21392): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-02-10 11:17:08 (21392): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-02-10 11:17:08 (21392): Guest Log: Further information can be found at the LHC@home message board.
2026-02-10 11:18:01 (21392): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-02-10 11:18:01 (21392): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-02-10 11:18:01 (21392): Guest Log: 2.6.3.0 1570 1 30152 156072 3 1 3117739 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-02-10 11:18:02 (21392): Guest Log: copied the webapp to /var/www
2026-02-10 11:18:02 (21392): Guest Log: ATHENA_PROC_NUMBER=3
2026-02-10 11:18:02 (21392): Guest Log: ATHENA_CORE_NUMBER=3
2026-02-10 11:18:02 (21392): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-02-10 11:18:02 (21392): Guest Log:  *** Starting ATLAS job. (PandaID=7009368560 taskID=48431096) ***
2026-02-10 12:52:41 (21392): VM state change detected. (old = 'running', new = 'paused')
2026-02-10 12:53:01 (21392): VM state change detected. (old = 'paused', new = 'running')
2026-02-10 12:56:57 (21392): Status Report: Elapsed Time: '6000.000000'
2026-02-10 12:56:57 (21392): Status Report: CPU Time: '10059.687500'
2026-02-10 13:05:03 (21392): VM state change detected. (old = 'running', new = 'paused')
2026-02-10 13:05:23 (21392): VM state change detected. (old = 'paused', new = 'running')
2026-02-10 14:37:23 (21392): Status Report: Elapsed Time: '12000.000000'
2026-02-10 14:37:23 (21392): Status Report: CPU Time: '20942.468750'
2026-02-10 16:17:28 (21392): Status Report: Elapsed Time: '18000.000000'
2026-02-10 16:17:28 (21392): Status Report: CPU Time: '31825.703125'
2026-02-10 16:48:07 (21392): Guest Log:  *** Job finished ***
2026-02-10 16:48:07 (21392): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-02-10 16:48:07 (21392): Guest Log: 2026-02-10 07:46:57,498 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-02-10 16:48:07 (21392): Guest Log: 2026-02-10 07:46:57,498 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-02-10 16:48:07 (21392): Guest Log: 2026-02-10 07:47:21,907 | INFO     | [monitor] cgroup control has ended
2026-02-10 16:48:07 (21392): Guest Log: 2026-02-10 07:47:22,084 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139763509172032)>', '<ExcThread(monitor, started 139762799212288)>']
2026-02-10 16:48:07 (21392): Guest Log: 2026-02-10 07:47:22,652 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-02-10 16:48:07 (21392): Guest Log: 2026-02-10 07:47:22,652 | INFO     | [monitor] control thread has ended
2026-02-10 16:48:07 (21392): Guest Log: 2026-02-10 07:47:27,089 | INFO     | all workflow threads have been joined
2026-02-10 16:48:07 (21392): Guest Log: 2026-02-10 07:47:27,089 | INFO     | end of generic workflow (traces error code: 0)
2026-02-10 16:48:07 (21392): Guest Log: 2026-02-10 07:47:27,089 | INFO     | traces error code: 0
2026-02-10 16:48:07 (21392): Guest Log: 2026-02-10 07:47:27,089 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-02-10 16:48:07 (21392): Guest Log: 2026-02-10 07:47:27,176 [wrapper] ==== pilot stdout END ====
2026-02-10 16:48:07 (21392): Guest Log: 2026-02-10 07:47:27,180 [wrapper] ==== wrapper stdout RESUME ====
2026-02-10 16:48:07 (21392): Guest Log: 2026-02-10 07:47:27,185 [wrapper] pilotpid: 5972
2026-02-10 16:48:07 (21392): Guest Log: 2026-02-10 07:47:27,189 [wrapper] Pilot exit status: 0
2026-02-10 16:48:07 (21392): Guest Log: 2026-02-10 07:47:27,235 [wrapper] pandaids: 7009368560
2026-02-10 16:48:07 (21392): Guest Log: 2026-02-10 07:47:27,263 [wrapper] cleanup supervisor_pilot 28897 5973
2026-02-10 16:48:07 (21392): Guest Log: 2026-02-10 07:47:27,267 [wrapper] Test setup, not cleaning
2026-02-10 16:48:07 (21392): Guest Log: 2026-02-10 07:47:27,271 [wrapper] apfmon messages muted
2026-02-10 16:48:07 (21392): Guest Log: 2026-02-10 07:47:27,274 [wrapper] ==== wrapper stdout END ====
2026-02-10 16:48:07 (21392): Guest Log: 2026-02-10 07:47:27,278 [wrapper] ==== wrapper stderr END ====
2026-02-10 16:48:07 (21392): Guest Log:  *** Error codes and diagnostics ***
2026-02-10 16:48:07 (21392): Guest Log:     "exeErrorCode": 0,
2026-02-10 16:48:07 (21392): Guest Log:     "exeErrorDiag": "",
2026-02-10 16:48:07 (21392): Guest Log:     "pilotErrorCode": 0,
2026-02-10 16:48:07 (21392): Guest Log:     "pilotErrorDiag": "",
2026-02-10 16:48:07 (21392): Guest Log:  *** Listing of results directory ***
2026-02-10 16:48:07 (21392): Guest Log: total 278124
2026-02-10 16:48:07 (21392): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Feb  9 20:26 pilot3.tar.gz
2026-02-10 16:48:07 (21392): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Feb  9 20:30 queuedata.json
2026-02-10 16:48:07 (21392): Guest Log: -rwx------. 1 atlas atlas     36322 Feb  9 20:31 runpilot2-wrapper.sh
2026-02-10 16:48:07 (21392): Guest Log: -rwxr-xr-x. 1 atlas atlas      8602 Feb 10 02:17 init_data.xml
2026-02-10 16:48:07 (21392): Guest Log: -rwxr-xr-x. 1 atlas atlas    597967 Feb 10 02:17 input.tar.gz
2026-02-10 16:48:07 (21392): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Feb 10 02:17 start_atlas.sh
2026-02-10 16:48:07 (21392): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 10 02:17 EVNT.48431094._000404.pool.root.1 -> /data/./ATLAS.root_0
2026-02-10 16:48:07 (21392): Guest Log: -rw-r--r--. 1 atlas atlas      2556 Feb 10 02:18 pandaJob.out
2026-02-10 16:48:07 (21392): Guest Log: -rw-------. 1 atlas atlas   1009496 Feb 10 02:18 agis_schedconf.cvmfs.json
2026-02-10 16:48:07 (21392): Guest Log: -rw-------. 1 atlas atlas       418 Feb 10 02:18 workernode_map.json
2026-02-10 16:48:07 (21392): Guest Log: drwx------. 5 atlas atlas      4096 Feb 10 02:18 pilot3
2026-02-10 16:48:07 (21392): Guest Log: -rw-------. 1 atlas atlas 274701658 Feb 10 07:45 HITS.48431096._019039.pool.root.1
2026-02-10 16:48:07 (21392): Guest Log: -rw-------. 1 atlas atlas      1036 Feb 10 07:46 memory_monitor_summary.json
2026-02-10 16:48:07 (21392): Guest Log: -rw-------. 1 atlas atlas   1513144 Feb 10 07:46 agis_ddmendpoints.agis.ALL.json
2026-02-10 16:48:07 (21392): Guest Log: -rw-------. 1 atlas atlas    466576 Feb 10 07:46 log.48431096._019039.job.log.tgz.1
2026-02-10 16:48:07 (21392): Guest Log: -rw-------. 1 atlas atlas      6330 Feb 10 07:46 heartbeat.json
2026-02-10 16:48:07 (21392): Guest Log: -rw-------. 1 atlas atlas        95 Feb 10 07:46 pilot_heartbeat.json
2026-02-10 16:48:07 (21392): Guest Log: -rw-------. 1 atlas atlas      4917 Feb 10 07:47 pilotlog.txt
2026-02-10 16:48:07 (21392): Guest Log: -rw-------. 1 atlas atlas   2648638 Feb 10 07:47 log.48431096._019039.job.log.1
2026-02-10 16:48:07 (21392): Guest Log: -rw-------. 1 atlas atlas       357 Feb 10 07:47 output.list
2026-02-10 16:48:07 (21392): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 10 07:47 runtime_log
2026-02-10 16:48:07 (21392): Guest Log: -rw-------. 1 atlas atlas   3133440 Feb 10 07:47 result.tar.gz
2026-02-10 16:48:07 (21392): Guest Log: -rw-r--r--. 1 atlas atlas      8785 Feb 10 07:47 runtime_log.err
2026-02-10 16:48:07 (21392): Guest Log: -rw-------. 1 atlas atlas       669 Feb 10 07:47 7HtNDmo5m98n9Rq4apOajLDm4fhM0noT9bVooX4SDmKwfKDmOKGu2n.diag
2026-02-10 16:48:07 (21392): Guest Log: Looking for outputfile HITS.48431096._019039.pool.root.1
2026-02-10 16:48:07 (21392): Guest Log: HITS file was successfully produced
2026-02-10 16:48:07 (21392): Guest Log: -rw-------. 1 atlas atlas 274701658 Feb 10 07:45 /home/atlas/RunAtlas/HITS.48431096._019039.pool.root.1
2026-02-10 16:48:09 (21392): Guest Log: Successfully finished the ATLAS job!
2026-02-10 16:48:09 (21392): Guest Log: Copying the results back to the shared directory!
2026-02-10 16:48:09 (21392): Guest Log:  *** Contents of shared directory: ***
2026-02-10 16:48:09 (21392): Guest Log: total 932968
2026-02-10 16:48:09 (21392): Guest Log: -rwxrwxrwx. 1 root root 676892795 Feb 10 02:16 ATLAS.root_0
2026-02-10 16:48:09 (21392): Guest Log: -rwxrwxrwx. 1 root root 274701658 Feb 10  2026 HITS.pool.root.1
2026-02-10 16:48:09 (21392): Guest Log: -rwxrwxrwx. 1 root root      8602 Feb 10 02:16 init_data.xml
2026-02-10 16:48:09 (21392): Guest Log: -rwxrwxrwx. 1 root root    597967 Feb 10 01:33 input.tar.gz
2026-02-10 16:48:09 (21392): Guest Log: -rwxrwxrwx. 1 root root   3133440 Feb 10  2026 result.tar.gz
2026-02-10 16:48:09 (21392): Guest Log: -rwxrwxrwx. 1 root root     15845 Feb 10 01:33 start_atlas.sh
2026-02-10 16:48:09 (21392): Guest Log:  *** Success! Shutting down the machine. ***
2026-02-10 16:48:09 (21392): VM Completion File Detected.
2026-02-10 16:48:09 (21392): Powering off VM.
2026-02-10 16:48:09 (21392): Successfully stopped VM.
2026-02-10 16:48:09 (21392): Deregistering VM. (boinc_24af540e93f722f7, slot#2)
2026-02-10 16:48:09 (21392): Removing network bandwidth throttle group from VM.
2026-02-10 16:48:10 (21392): Removing VM from VirtualBox.
2026-02-10 16:48:15 (21392): called boinc_finish(0)

</stderr_txt>
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