Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:47:40 (3624045): wrapper (7.7.26015): starting
18:47:40 (3624045): wrapper: running run_atlas (--nthreads 8)
[2026-02-09 18:47:40] Arguments: --nthreads 8
[2026-02-09 18:47:40] Threads: 8
[2026-02-09 18:47:40] Checking for CVMFS
[2026-02-09 18:47:41] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-09 18:47:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-09 18:47:41] Running cvmfs_config stat atlas.cern.ch
[2026-02-09 18:47:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-09 18:47:42] 2.13.3.0 9597 67977 177400 156069 2 600 33502898 40960001 39302 16776704 0 485330682 99.725 349104116 46480 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-09 18:47:42] CVMFS is ok
[2026-02-09 18:47:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-09 18:47:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-09 18:47:42] Further information can be found at the LHC@home message board.
[2026-02-09 18:47:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-09 18:47:42] Checking for apptainer binary...
[2026-02-09 18:47:42] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-09 18:47:42] Running /usr/bin/apptainer --version
[2026-02-09 18:47:42] apptainer version 1.4.5-2.el9
[2026-02-09 18:47:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-09 18:47:42] c-208-38.aglt2.org
[2026-02-09 18:47:42] apptainer works
[2026-02-09 18:47:42] Set ATHENA_PROC_NUMBER=8
[2026-02-09 18:47:42] Set ATHENA_CORE_NUMBER=8
[2026-02-09 18:47:43] Starting ATLAS job with PandaID=7006605058
[2026-02-09 18:47:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-09 20:40:49]  *** The last 200 lines of the pilot log: ***
[2026-02-09 20:40:50] 2026-02-10 01:40:13,675 | INFO     | mean y: 2345891.296296296
[2026-02-09 20:40:50] 2026-02-10 01:40:13,675 | INFO     | intersect: -155150870917.8204
[2026-02-09 20:40:50] 2026-02-10 01:40:13,675 | INFO     | chi2: 5.097094761677219
[2026-02-09 20:40:50] 2026-02-10 01:40:13,675 | INFO     | sum of square deviations: 338810602.21359324
[2026-02-09 20:40:50] 2026-02-10 01:40:13,675 | INFO     | sum of deviations: 39610702073.16507
[2026-02-09 20:40:50] 2026-02-10 01:40:13,675 | INFO     | mean x: 1770684140.0873787
[2026-02-09 20:40:50] 2026-02-10 01:40:13,676 | INFO     | mean y: 2360939.203883495
[2026-02-09 20:40:50] 2026-02-10 01:40:13,676 | INFO     | intersect: -207010174915.45383
[2026-02-09 20:40:50] 2026-02-10 01:40:13,676 | INFO     | chi2: 4.3093132424980265
[2026-02-09 20:40:50] 2026-02-10 01:40:13,676 | INFO     | current chi2=4.3093132424980265 (change=15.455500751176347 %)
[2026-02-09 20:40:50] 2026-02-10 01:40:13,676 | INFO     | right removable region: 102
[2026-02-09 20:40:50] 2026-02-10 01:40:13,676 | INFO     | sum of square deviations: 338810847.0291265
[2026-02-09 20:40:50] 2026-02-10 01:40:13,676 | INFO     | sum of deviations: 2523059618.446602
[2026-02-09 20:40:50] 2026-02-10 01:40:13,676 | INFO     | mean x: 1770684445.0970874
[2026-02-09 20:40:50] 2026-02-10 01:40:13,676 | INFO     | mean y: 2438958.155339806
[2026-02-09 20:40:50] 2026-02-10 01:40:13,676 | INFO     | intersect: -13183509660.69726
[2026-02-09 20:40:50] 2026-02-10 01:40:13,676 | INFO     | chi2: 1.3124340999985253
[2026-02-09 20:40:50] 2026-02-10 01:40:13,676 | INFO     | current chi2=1.3124340999985253 (change=74.25133019173722 %)
[2026-02-09 20:40:50] 2026-02-10 01:40:13,684 | INFO     | sum of square deviations: 291820869.4795911
[2026-02-09 20:40:50] 2026-02-10 01:40:13,685 | INFO     | sum of deviations: -6977306359.540815
[2026-02-09 20:40:50] 2026-02-10 01:40:13,685 | INFO     | mean x: 1770684597.6020408
[2026-02-09 20:40:50] 2026-02-10 01:40:13,685 | INFO     | mean y: 2469348.7040816327
[2026-02-09 20:40:50] 2026-02-10 01:40:13,685 | INFO     | intersect: 42338745454.04865
[2026-02-09 20:40:50] 2026-02-10 01:40:13,685 | INFO     | chi2: 0.8971967474478885
[2026-02-09 20:40:50] 2026-02-10 01:40:13,685 | INFO     | current chi2=0.8971967474478885 (change=31.638720188015796 %)
[2026-02-09 20:40:50] 2026-02-10 01:40:13,685 | INFO     | sum of square deviations: 249389116.92473125
[2026-02-09 20:40:50] 2026-02-10 01:40:13,685 | INFO     | sum of deviations: -7454401877.870968
[2026-02-09 20:40:50] 2026-02-10 01:40:13,685 | INFO     | mean x: 1770684750.1075268
[2026-02-09 20:40:50] 2026-02-10 01:40:13,685 | INFO     | mean y: 2470913.3870967743
[2026-02-09 20:40:50] 2026-02-10 01:40:13,685 | INFO     | intersect: 52929382436.56626
[2026-02-09 20:40:50] 2026-02-10 01:40:13,686 | INFO     | chi2: 0.8840536974907268
[2026-02-09 20:40:50] 2026-02-10 01:40:13,686 | INFO     | current chi2=0.8840536974907268 (change=1.4649016500057062 %)
[2026-02-09 20:40:50] 2026-02-10 01:40:13,686 | INFO     | left removable region: 30
[2026-02-09 20:40:50] 2026-02-10 01:40:13,686 | INFO     | sum of square deviations: 115717189.31944431
[2026-02-09 20:40:50] 2026-02-10 01:40:13,686 | INFO     | sum of deviations: 222192577.7083334
[2026-02-09 20:40:50] 2026-02-10 01:40:13,686 | INFO     | mean x: 1770685024.5972223
[2026-02-09 20:40:50] 2026-02-10 01:40:13,686 | INFO     | mean y: 2489819.5416666665
[2026-02-09 20:40:50] 2026-02-10 01:40:13,686 | INFO     | intersect: -3397463741.711059
[2026-02-09 20:40:50] 2026-02-10 01:40:13,686 | INFO     | chi2: 0.00011759037400268462
[2026-02-09 20:40:50] 2026-02-10 01:40:13,686 | INFO     | current memory leak: 1.92 B/s (using 72 data points, chi2=0.00)
[2026-02-09 20:40:50] 2026-02-10 01:40:13,686 | INFO     | could have reported an average CPU frequency of 3799 MHz (7 samples)
[2026-02-09 20:40:50] 2026-02-10 01:40:13,686 | INFO     | ..............................
[2026-02-09 20:40:50] 2026-02-10 01:40:13,686 | INFO     | . Timing measurements:
[2026-02-09 20:40:50] 2026-02-10 01:40:13,687 | INFO     | . get job = 0 s
[2026-02-09 20:40:50] 2026-02-10 01:40:13,687 | INFO     | . initial setup = 31 s
[2026-02-09 20:40:50] 2026-02-10 01:40:13,687 | INFO     | . payload setup = 37 s
[2026-02-09 20:40:50] 2026-02-10 01:40:13,687 | INFO     | . stage-in = 0 s
[2026-02-09 20:40:50] 2026-02-10 01:40:13,687 | INFO     | . payload execution = 6607 s
[2026-02-09 20:40:50] 2026-02-10 01:40:13,687 | INFO     | . stage-out = 1 s
[2026-02-09 20:40:50] 2026-02-10 01:40:13,687 | INFO     | . log creation = 0 s
[2026-02-09 20:40:50] 2026-02-10 01:40:13,687 | INFO     | ..............................
[2026-02-09 20:40:50] 2026-02-10 01:40:14,025 | INFO     | 
[2026-02-09 20:40:50] 2026-02-10 01:40:14,025 | INFO     | job summary report
[2026-02-09 20:40:50] 2026-02-10 01:40:14,025 | INFO     | --------------------------------------------------
[2026-02-09 20:40:50] 2026-02-10 01:40:14,025 | INFO     | PanDA job id: 7006605058
[2026-02-09 20:40:50] 2026-02-10 01:40:14,025 | INFO     | task id: 48318034
[2026-02-09 20:40:50] 2026-02-10 01:40:14,025 | INFO     | errors: (none)
[2026-02-09 20:40:50] 2026-02-10 01:40:14,025 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-09 20:40:50] 2026-02-10 01:40:14,025 | INFO     | pilot state: finished 
[2026-02-09 20:40:50] 2026-02-10 01:40:14,025 | INFO     | transexitcode: 0
[2026-02-09 20:40:50] 2026-02-10 01:40:14,025 | INFO     | exeerrorcode: 0
[2026-02-09 20:40:50] 2026-02-10 01:40:14,025 | INFO     | exeerrordiag: 
[2026-02-09 20:40:50] 2026-02-10 01:40:14,025 | INFO     | exitcode: 0
[2026-02-09 20:40:50] 2026-02-10 01:40:14,025 | INFO     | exitmsg: OK
[2026-02-09 20:40:50] 2026-02-10 01:40:14,025 | INFO     | cpuconsumptiontime: 22260 s
[2026-02-09 20:40:50] 2026-02-10 01:40:14,025 | INFO     | nevents: 400
[2026-02-09 20:40:50] 2026-02-10 01:40:14,025 | INFO     | neventsw: 0
[2026-02-09 20:40:50] 2026-02-10 01:40:14,025 | INFO     | pid: 3645937
[2026-02-09 20:40:50] 2026-02-10 01:40:14,025 | INFO     | pgrp: 3645937
[2026-02-09 20:40:50] 2026-02-10 01:40:14,025 | INFO     | corecount: 8
[2026-02-09 20:40:50] 2026-02-10 01:40:14,025 | INFO     | event service: False
[2026-02-09 20:40:50] 2026-02-10 01:40:14,025 | INFO     | sizes: {0: 2281966, 1: 2283084, 12: 2283084, 6647: 2310162, 6649: 2319160, 6650: 2319538}
[2026-02-09 20:40:50] 2026-02-10 01:40:14,025 | INFO     | --------------------------------------------------
[2026-02-09 20:40:50] 2026-02-10 01:40:14,025 | INFO     | 
[2026-02-09 20:40:50] 2026-02-10 01:40:14,026 | INFO     | executing command: ls -lF /tmp/boinchome/slots/7
[2026-02-09 20:40:50] 2026-02-10 01:40:14,143 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-09 20:40:50] 2026-02-10 01:40:14,143 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-09 20:40:50] 2026-02-10 01:40:14,143 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-09 20:40:50] 2026-02-10 01:40:14,143 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-09 20:40:50] 2026-02-10 01:40:14,143 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-09 20:40:50] 2026-02-10 01:40:14,143 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-09 20:40:50] 2026-02-10 01:40:14,143 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-09 20:40:50] 2026-02-10 01:40:14,143 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-09 20:40:50] 2026-02-10 01:40:14,143 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-09 20:40:50] 2026-02-10 01:40:14,143 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-09 20:40:50] 2026-02-10 01:40:14,143 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-09 20:40:50] 2026-02-10 01:40:14,143 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-09 20:40:50] 2026-02-10 01:40:14,143 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-09 20:40:50] 2026-02-10 01:40:14,144 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-09 20:40:50] 2026-02-10 01:40:14,144 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-09 20:40:50] 2026-02-10 01:40:14,144 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-09 20:40:50] 2026-02-10 01:40:14,144 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-09 20:40:50] 2026-02-10 01:40:14,144 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-09 20:40:50] 2026-02-10 01:40:14,144 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-09 20:40:50] 2026-02-10 01:40:14,144 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-09 20:40:50] 2026-02-10 01:40:14,144 | INFO     | job 7006605058 has completed (purged errors)
[2026-02-09 20:40:50] 2026-02-10 01:40:14,144 | INFO     | overall cleanup function is called
[2026-02-09 20:40:50] 2026-02-10 01:40:15,152 | INFO     | --- collectZombieJob: --- 10, [3645937]
[2026-02-09 20:40:50] 2026-02-10 01:40:15,152 | INFO     | zombie collector waiting for pid 3645937
[2026-02-09 20:40:50] 2026-02-10 01:40:15,152 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-09 20:40:50] 2026-02-10 01:40:15,152 | INFO     | collected zombie processes
[2026-02-09 20:40:50] 2026-02-10 01:40:15,152 | INFO     | will attempt to kill all subprocesses of pid=3645937
[2026-02-09 20:40:50] 2026-02-10 01:40:16,658 | INFO     | process IDs to be killed: [3645937] (in reverse order)
[2026-02-09 20:40:50] 2026-02-10 01:40:17,010 | WARNING  | found no corresponding commands to process id(s)
[2026-02-09 20:40:50] 2026-02-10 01:40:17,010 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-09 20:40:50] 2026-02-10 01:40:17,046 | INFO     | did not find any defunct processes belonging to 3645937
[2026-02-09 20:40:50] 2026-02-10 01:40:17,073 | INFO     | did not find any defunct processes belonging to 3645937
[2026-02-09 20:40:50] 2026-02-10 01:40:17,073 | INFO     | ready for new job
[2026-02-09 20:40:50] 2026-02-10 01:40:17,077 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-09 20:40:50] 2026-02-10 01:40:17,079 | INFO     | **************************************
[2026-02-09 20:40:50] 2026-02-10 01:40:17,079 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-09 20:40:50] 2026-02-10 01:40:17,079 | INFO     | **************************************
[2026-02-09 20:40:50] 2026-02-10 01:40:17,079 | INFO     | 
[2026-02-09 20:40:50] 2026-02-10 01:40:17,105 | INFO     | architecture information:
[2026-02-09 20:40:50] 2026-02-10 01:40:17,107 | INFO     | executing command: cat /etc/os-release
[2026-02-09 20:40:50] 2026-02-10 01:40:17,187 | INFO     | cat /etc/os-release:
[2026-02-09 20:40:50] NAME="CentOS Linux"
[2026-02-09 20:40:50] VERSION="7 (Core)"
[2026-02-09 20:40:50] ID="centos"
[2026-02-09 20:40:50] ID_LIKE="rhel fedora"
[2026-02-09 20:40:50] VERSION_ID="7"
[2026-02-09 20:40:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-09 20:40:50] ANSI_COLOR="0;31"
[2026-02-09 20:40:50] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-09 20:40:50] HOME_URL="https://www.centos.org/"
[2026-02-09 20:40:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-09 20:40:50] 
[2026-02-09 20:40:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-09 20:40:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-09 20:40:50] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-09 20:40:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-09 20:40:50] 
[2026-02-09 20:40:50] 2026-02-10 01:40:17,187 | INFO     | **************************************
[2026-02-09 20:40:50] 2026-02-10 01:40:17,691 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2026-02-09 20:40:50] 2026-02-10 01:40:17,758 | INFO     | sufficient remaining disk space (163322003456 B)
[2026-02-09 20:40:50] 2026-02-10 01:40:17,759 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-09 20:40:50] 2026-02-10 01:40:17,759 | INFO     | current server update state: UPDATING_FINAL
[2026-02-09 20:40:50] 2026-02-10 01:40:17,759 | INFO     | update_server=False
[2026-02-09 20:40:50] 2026-02-10 01:40:17,759 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-09 20:40:50] 2026-02-10 01:40:17,865 | INFO     | all job control threads have been joined
[2026-02-09 20:40:50] 2026-02-10 01:40:18,026 | INFO     | all payload control threads have been joined
[2026-02-09 20:40:50] 2026-02-10 01:40:18,261 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-09 20:40:50] 2026-02-10 01:40:18,357 | INFO     | job.realtimelogging is not enabled
[2026-02-09 20:40:50] 2026-02-10 01:40:18,475 | INFO     | all data control threads have been joined
[2026-02-09 20:40:50] 2026-02-10 01:40:18,765 | INFO     | [job] retrieve thread has finished
[2026-02-09 20:40:50] 2026-02-10 01:40:18,790 | INFO     | [payload] failed_post thread has finished
[2026-02-09 20:40:50] 2026-02-10 01:40:18,871 | INFO     | [job] control thread has finished
[2026-02-09 20:40:50] 2026-02-10 01:40:18,871 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-09 20:40:50] 2026-02-10 01:40:18,985 | WARNING  | process 3645937 can no longer be monitored (due to stat problems) - aborting
[2026-02-09 20:40:50] 2026-02-10 01:40:19,053 | INFO     | [payload] control thread has finished
[2026-02-09 20:40:50] 2026-02-10 01:40:19,324 | INFO     | [payload] validate_pre thread has finished
[2026-02-09 20:40:50] 2026-02-10 01:40:19,362 | INFO     | [job] create_data_payload thread has finished
[2026-02-09 20:40:50] 2026-02-10 01:40:19,363 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-09 20:40:50] 2026-02-10 01:40:19,424 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-09 20:40:50] 2026-02-10 01:40:19,478 | INFO     | [payload] validate_post thread has finished
[2026-02-09 20:40:50] 2026-02-10 01:40:19,482 | INFO     | [data] control thread has finished
[2026-02-09 20:40:50] 2026-02-10 01:40:19,710 | INFO     | using path: /tmp/boinchome/slots/7/memory_monitor_summary.json (trf name=prmon)
[2026-02-09 20:40:50] 2026-02-10 01:40:19,710 | INFO     | using path: /tmp/boinchome/slots/7/memory_monitor_summary.json (trf name=prmon)
[2026-02-09 20:40:50] 2026-02-10 01:40:19,710 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-02-09 20:40:50] 2026-02-10 01:40:19,711 | WARNING  | maxPSS not found in memory monitor output
[2026-02-09 20:40:50] 2026-02-10 01:40:19,711 | INFO     | skipping file size check of payload stdout file (/tmp/boinchome/slots/7/PanDA_Pilot-7006605058/payload.stdout) since it has not been created yet
[2026-02-09 20:40:50] 2026-02-10 01:40:19,711 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2026-02-09 20:40:50] 2026-02-10 01:40:19,743 | INFO     | [data] copytool_in thread has finished
[2026-02-09 20:40:50] 2026-02-10 01:40:19,836 | INFO     | sufficient remaining disk space (163322003456 B)
[2026-02-09 20:40:50] 2026-02-10 01:40:19,836 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-02-09 20:40:50] 2026-02-10 01:40:19,836 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/7/PanDA_Pilot-7006605058/HITS.48318034._013754.pool.root.1 since it does not exist
[2026-02-09 20:40:50] 2026-02-10 01:40:19,878 | INFO     | [job] queue monitor thread has finished
[2026-02-09 20:40:50] 2026-02-10 01:40:20,125 | INFO     | [job] validate thread has finished
[2026-02-09 20:40:50] 2026-02-10 01:40:20,268 | INFO     | [payload] execute_payloads thread has finished
[2026-02-09 20:40:50] 2026-02-10 01:40:20,268 | INFO     | [data] copytool_out thread has finished
[2026-02-09 20:40:50] 2026-02-10 01:40:20,973 | INFO     | number of running child processes to parent process 3645937: 1
[2026-02-09 20:40:50] 2026-02-10 01:40:20,973 | INFO     | maximum number of monitored processes: 6
[2026-02-09 20:40:50] 2026-02-10 01:40:20,973 | INFO     | aborting job monitoring since job object (job id=7006605058) has expired
[2026-02-09 20:40:50] 2026-02-10 01:40:20,973 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-09 20:40:50] 2026-02-10 01:40:20,974 | INFO     | will abort loop
[2026-02-09 20:40:50] 2026-02-10 01:40:21,980 | INFO     | [job] job monitor thread has finished
[2026-02-09 20:40:50] 2026-02-10 01:40:22,845 | INFO     | [monitor] cgroup control has ended
[2026-02-09 20:40:50] 2026-02-10 01:40:23,433 | INFO     | [data] queue_monitor thread has finished
[2026-02-09 20:40:50] 2026-02-10 01:40:24,054 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140023345325888)>', '<ExcThread(monitor, started 140022971885312)>']
[2026-02-09 20:40:50] 2026-02-10 01:40:29,080 | INFO     | all workflow threads have been joined
[2026-02-09 20:40:50] 2026-02-10 01:40:29,112 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-09 20:40:50] 2026-02-10 01:40:29,112 | INFO     | traces error code: 0
[2026-02-09 20:40:50] 2026-02-10 01:40:29,112 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-09 20:40:50] 2026-02-10 01:40:48,190 | INFO     | PID=3632905 has CPU usage=8.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-09 20:40:50] 2026-02-10 01:40:48,191 | INFO     | .. there are 43 such processes running
[2026-02-09 20:40:50] 2026-02-10 01:40:48,191 | INFO     | found 0 job(s) in 20 queues
[2026-02-09 20:40:50] 2026-02-10 01:40:48,191 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-09 20:40:50] 2026-02-10 01:40:48,191 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-09 20:40:50] 2026-02-10 01:40:48,191 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-09 20:40:50] 2026-02-10 01:40:48,191 | INFO     | [monitor] control thread has ended
[2026-02-09 20:40:50] 2026-02-10 01:40:48,407 [wrapper] ==== pilot stdout END ====
[2026-02-09 20:40:50] 2026-02-10 01:40:48,455 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-09 20:40:50] 2026-02-10 01:40:48,539 [wrapper] pilotpid: 3632905
[2026-02-09 20:40:50] 2026-02-10 01:40:48,560 [wrapper] Pilot exit status: 0
[2026-02-09 20:40:50] 2026-02-10 01:40:48,680 [wrapper] pandaids: 7006605058
[2026-02-09 20:40:50] 2026-02-10 01:40:49,137 [wrapper] cleanup supervisor_pilot   21157 3632906
[2026-02-09 20:40:50] 2026-02-10 01:40:49,160 [wrapper] Test setup, not cleaning
[2026-02-09 20:40:50] 2026-02-10 01:40:49,181 [wrapper] apfmon messages muted
[2026-02-09 20:40:50] 2026-02-10 01:40:49,189 [wrapper] ==== wrapper stdout END ====
[2026-02-09 20:40:50] 2026-02-10 01:40:49,228 [wrapper] ==== wrapper stderr END ====
[2026-02-09 20:40:50]  *** Error codes and diagnostics ***
[2026-02-09 20:40:50]     "exeErrorCode": 0,
[2026-02-09 20:40:50]     "exeErrorDiag": "",
[2026-02-09 20:40:50]     "pilotErrorCode": 0,
[2026-02-09 20:40:50]     "pilotErrorDiag": "",
[2026-02-09 20:40:50]  *** Listing of results directory ***
[2026-02-09 20:40:50] total 669368
[2026-02-09 20:40:50] -rw-r--r--. 1 boincer umatlas    584627 Feb  9 10:31 pilot3.tar.gz
[2026-02-09 20:40:50] -rwx------. 1 boincer umatlas     36322 Feb  9 10:35 runpilot2-wrapper.sh
[2026-02-09 20:40:50] -rw-r--r--. 1 boincer umatlas      5111 Feb  9 10:38 queuedata.json
[2026-02-09 20:40:50] -rw-r--r--. 1 boincer umatlas       100 Feb  9 18:47 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-09 20:40:50] -rwxr-xr-x. 1 boincer umatlas      7986 Feb  9 18:47 run_atlas
[2026-02-09 20:40:50] -rw-r--r--. 1 boincer umatlas       105 Feb  9 18:47 job.xml
[2026-02-09 20:40:50] -rw-r--r--. 2 boincer umatlas 498733443 Feb  9 18:47 EVNT.48318032._000253.pool.root.1
[2026-02-09 20:40:50] -rw-r--r--. 2 boincer umatlas     15845 Feb  9 18:47 start_atlas.sh
[2026-02-09 20:40:50] drwxrwx--x. 2 boincer umatlas      4096 Feb  9 18:47 shared
[2026-02-09 20:40:50] -rw-r--r--. 2 boincer umatlas    597956 Feb  9 18:47 input.tar.gz
[2026-02-09 20:40:50] -rw-r--r--. 1 boincer umatlas         0 Feb  9 18:47 boinc_lockfile
[2026-02-09 20:40:50] -rw-r--r--. 1 boincer umatlas      2538 Feb  9 18:47 pandaJob.out
[2026-02-09 20:40:50] -rw-------. 1 boincer umatlas        57 Feb  9 18:47 setup.sh.local
[2026-02-09 20:40:50] -rw-------. 1 boincer umatlas   1009496 Feb  9 18:48 agis_schedconf.cvmfs.json
[2026-02-09 20:40:50] -rw-------. 1 boincer umatlas   1513144 Feb  9 18:48 agis_ddmendpoints.agis.ALL.json
[2026-02-09 20:40:50] -rw-------. 1 boincer umatlas       428 Feb  9 18:49 workernode_map.json
[2026-02-09 20:40:50] drwx------. 5 boincer umatlas      4096 Feb  9 18:49 pilot3
[2026-02-09 20:40:50] -rw-------. 1 boincer umatlas 180250750 Feb  9 20:39 HITS.48318034._013754.pool.root.1
[2026-02-09 20:40:50] -rw-r--r--. 1 boincer umatlas       530 Feb  9 20:39 boinc_task_state.xml
[2026-02-09 20:40:50] -rw-r--r--. 1 boincer umatlas      7183 Feb  9 20:40 init_data.xml
[2026-02-09 20:40:50] -rw-------. 1 boincer umatlas      1049 Feb  9 20:40 memory_monitor_summary.json
[2026-02-09 20:40:50] -rw-------. 1 boincer umatlas    376892 Feb  9 20:40 log.48318034._013754.job.log.tgz.1
[2026-02-09 20:40:50] -rw-------. 1 boincer umatlas      6362 Feb  9 20:40 heartbeat.json
[2026-02-09 20:40:50] -rw-------. 1 boincer umatlas        95 Feb  9 20:40 pilot_heartbeat.json
[2026-02-09 20:40:50] -rw-r--r--. 1 boincer umatlas      8192 Feb  9 20:40 boinc_mmap_file
[2026-02-09 20:40:50] -rw-r--r--. 1 boincer umatlas        27 Feb  9 20:40 wrapper_checkpoint.txt
[2026-02-09 20:40:50] -rw-------. 1 boincer umatlas       823 Feb  9 20:40 pilotlog.txt
[2026-02-09 20:40:50] -rw-------. 1 boincer umatlas    875508 Feb  9 20:40 log.48318034._013754.job.log.1
[2026-02-09 20:40:50] -rw-------. 1 boincer umatlas       357 Feb  9 20:40 output.list
[2026-02-09 20:40:50] -rw-r--r--. 1 boincer umatlas       620 Feb  9 20:40 runtime_log
[2026-02-09 20:40:50] -rw-------. 1 boincer umatlas   1269760 Feb  9 20:40 result.tar.gz
[2026-02-09 20:40:50] -rw-r--r--. 1 boincer umatlas      9341 Feb  9 20:40 runtime_log.err
[2026-02-09 20:40:50] -rw-------. 1 boincer umatlas       657 Feb  9 20:40 eMbKDmITi98nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmFFgKDm2Jpc3m.diag
[2026-02-09 20:40:50] -rw-r--r--. 1 boincer umatlas     21259 Feb  9 20:40 stderr.txt
[2026-02-09 20:40:50] HITS file was successfully produced:
[2026-02-09 20:40:50] -rw-------. 1 boincer umatlas 180250750 Feb  9 20:39 shared/HITS.pool.root.1
[2026-02-09 20:40:50]  *** Contents of shared directory: ***
[2026-02-09 20:40:50] total 664924
[2026-02-09 20:40:50] -rw-r--r--. 2 boincer umatlas 498733443 Feb  9 18:47 ATLAS.root_0
[2026-02-09 20:40:50] -rw-r--r--. 2 boincer umatlas     15845 Feb  9 18:47 start_atlas.sh
[2026-02-09 20:40:50] -rw-r--r--. 2 boincer umatlas    597956 Feb  9 18:47 input.tar.gz
[2026-02-09 20:40:50] -rw-------. 1 boincer umatlas 180250750 Feb  9 20:39 HITS.pool.root.1
[2026-02-09 20:40:50] -rw-------. 1 boincer umatlas   1269760 Feb  9 20:40 result.tar.gz
20:40:52 (3624045): run_atlas exited; CPU time 22491.551909
20:40:52 (3624045): called boinc_finish(0)

</stderr_txt>
]]>

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