Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:00:40 (3979409): wrapper (7.7.26015): starting
15:00:40 (3979409): wrapper: running run_atlas (--nthreads 8)
[2026-02-09 15:00:40] Arguments: --nthreads 8
[2026-02-09 15:00:40] Threads: 8
[2026-02-09 15:00:40] Checking for CVMFS
[2026-02-09 15:00:40] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-09 15:00:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-09 15:00:41] Running cvmfs_config stat atlas.cern.ch
[2026-02-09 15:00:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-09 15:00:42] 2.11.3.0 278442 101929 202088 156067 0 121 30511861 45568000 19784 130560 0 580235462 99.794 342866504 22133 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-02-09 15:00:42] CVMFS is ok
[2026-02-09 15:00:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-09 15:00:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-09 15:00:42] Further information can be found at the LHC@home message board.
[2026-02-09 15:00:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-09 15:00:42] Checking for apptainer binary...
[2026-02-09 15:00:42] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-09 15:00:42] Running /usr/bin/apptainer --version
[2026-02-09 15:00:42] apptainer version 1.4.1-1.el9
[2026-02-09 15:00:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-09 15:00:42] wns0021.triumf.lcg
[2026-02-09 15:00:42] apptainer works
[2026-02-09 15:00:42] Set ATHENA_PROC_NUMBER=8
[2026-02-09 15:00:42] Set ATHENA_CORE_NUMBER=8
[2026-02-09 15:00:42] Starting ATLAS job with PandaID=7008292920
[2026-02-09 15:00:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-09 15:05:25]  *** The last 200 lines of the pilot log: ***
[2026-02-09 15:05:25] 2026-02-09 23:04:18,540 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-02-09 15:05:25] 2026-02-09 23:04:18,541 | INFO     | ..............................
[2026-02-09 15:05:25] 2026-02-09 23:04:18,541 | INFO     | . Timing measurements:
[2026-02-09 15:05:25] 2026-02-09 23:04:18,541 | INFO     | . get job = 0 s
[2026-02-09 15:05:25] 2026-02-09 23:04:18,541 | INFO     | . initial setup = 15 s
[2026-02-09 15:05:25] 2026-02-09 23:04:18,541 | INFO     | . payload setup = 16 s
[2026-02-09 15:05:25] 2026-02-09 23:04:18,541 | INFO     | . stage-in = 0 s
[2026-02-09 15:05:25] 2026-02-09 23:04:18,541 | INFO     | . payload execution = 36 s
[2026-02-09 15:05:25] 2026-02-09 23:04:18,541 | INFO     | . stage-out = 0 s
[2026-02-09 15:05:25] 2026-02-09 23:04:18,541 | INFO     | . log creation = 0 s
[2026-02-09 15:05:25] 2026-02-09 23:04:18,541 | INFO     | ..............................
[2026-02-09 15:05:25] 2026-02-09 23:04:18,541 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-09 15:05:25] 2026-02-09 23:04:18,541 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7008292920/pilotlog.txt
[2026-02-09 15:05:25] 2026-02-09 23:04:18,568 | INFO     | PID=3983438 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-09 15:05:25] 2026-02-09 23:04:18,568 | INFO     | .. there are 33 such processes running
[2026-02-09 15:05:25] 2026-02-09 23:04:18,583 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-02-09 15:05:25] - Log from pilotlog.txt -
[2026-02-09 15:05:25] 2026-02-09 23:04:18,539 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-09 15:05:25] 2026-02-09 23:04:18,540 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-09 15:05:25] 2026-02-09 23:04:18,540 | WARNING  | found no stored workdir sizes
[2026-02-09 15:05:25] 2026-02-09 23:04:18,540 | INFO     | will not add max space = 0 B to job metrics
[2026-02-09 15:05:25] 2026-02-09 23:04:18,540 | WARNING  | wrong length of table data, x=[1770678107.0], y=[6929.0] (must be same and length>=4)
[2026-02-09 15:05:25] 2026-02-09 23:04:18,540 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-02-09 15:05:25] 2026-02-09 23:04:18,541 | INFO     | ..............................
[2026-02-09 15:05:25] 2026-02-09 23:04:18,541 | INFO     | . Timing measurements:
[2026-02-09 15:05:25] 2026-02-09 23:04:18,541 | INFO     | . get job = 0 s
[2026-02-09 15:05:25] 2026-02-09 23:04:18,541 | INFO     | . initial setup = 15 s
[2026-02-09 15:05:25] 2026-02-09 23:04:18,541 | INFO     | . payload setup = 16 s
[2026-02-09 15:05:25] 2026-02-09 23:04:18,541 | INFO     | . stage-in = 0 s
[2026-02-09 15:05:25] 2026-02-09 23:04:18,541 | INFO     | . payload execution = 36 s
[2026-02-09 15:05:25] 2026-02-09 23:04:18,541 | INFO     | . stage-out = 0 s
[2026-02-09 15:05:25] 2026-02-09 23:04:18,541 | INFO     | . log creation = 0 s
[2026-02-09 15:05:25] 2026-02-09 23:04:18,541 | INFO     | ..............................
[2026-02-09 15:05:25] 2026-02-09 23:04:18,541 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-09 15:05:25] 2026-02-09 23:04:18,541 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7008292920/pilotlog.txt
[2026-02-09 15:05:25] 2026-02-09 23:04:18,568 | INFO     | PID=3983438 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-09 15:05:25] 2026-02-09 23:04:18,568 | INFO     | .. there are 33 such processes running
[2026-02-09 15:05:25] 2026-02-09 23:04:18,583 | WARNING  | 
[2026-02-09 15:05:25] [begin log extracts]
[2026-02-09 15:05:25] - Log from pilotlog.txt -
[2026-02-09 15:05:25] 2026-02-09 23:04:18,539 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-09 15:05:25] 2026-02-09 23:04:18,540 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-09 15:05:25] 2026-02-09 23:04:18,540 | WARNING  | found no stored workdir sizes
[2026-02-09 15:05:25] 2026-02-09 23:04:18,540 | INFO     | will not add max space = 0 B to job metrics
[2026-02-09 15:05:25] 2026-02-09 23:04:18,540 | WARNING  | wrong length of table data, x=[1770678107.0], y=[6929.0] (must be same and length>=4)
[2026-02-09 15:05:25] 2026-02-09 23:04:18,540 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-02-09 15:05:25] 2026-02-09 23:04:18,541 | INFO     | ..............................
[2026-02-09 15:05:25] 2026-02-09 23:04:18,541 | INFO     | . Timing measurements:
[2026-02-09 15:05:25] 2026-02-09 23:04:18,541 | INFO     | . get job = 0 s
[2026-02-09 15:05:25] 2026-02-09 23:04:18,541 | INFO     | . initial setup = 15 s
[2026-02-09 15:05:25] 2026-02-09 23:04:18,541 | INFO     | . payload setup = 16 s
[2026-02-09 15:05:25] 2026-02-09 23:04:18,541 | INFO     | . stage-in = 0 s
[2026-02-09 15:05:25] 2026-02-09 23:04:18,541 | INFO     | . payload execution = 36 s
[2026-02-09 15:05:25] 2026-02-09 23:04:18,541 | INFO     | . stage-out = 0 s
[2026-02-09 15:05:25] 2026-02-09 23:04:18,541 | INFO     | . log creation = 0 s
[2026-02-09 15:05:25] 2026-02-09 23:04:18,541 | INFO     | ..............................
[2026-02-09 15:05:25] 2026-02-09 23:04:18,541 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-09 15:05:25] 2026-02-09 23:04:18,541 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7008292920/pilotlog.txt
[2026-02-09 15:05:25] 2026-02-09 23:04:18,568 | INFO     | PID=3983438 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-09 15:05:25] 2026-02-09 23:04:18,568 | INFO     | .. there are 33 such processes running
[2026-02-09 15:05:25] [end log extracts]
[2026-02-09 15:05:25] 2026-02-09 23:04:18,583 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-02-09 15:05:25] 2026-02-09 23:04:18,584 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-02-09 15:05:25] 2026-02-09 23:04:19,036 | INFO     | 
[2026-02-09 15:05:25] 2026-02-09 23:04:19,036 | INFO     | job summary report
[2026-02-09 15:05:25] 2026-02-09 23:04:19,036 | INFO     | --------------------------------------------------
[2026-02-09 15:05:25] 2026-02-09 23:04:19,036 | INFO     | PanDA job id: 7008292920
[2026-02-09 15:05:25] 2026-02-09 23:04:19,036 | INFO     | task id: 48431096
[2026-02-09 15:05:25] 2026-02-09 23:04:19,036 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-02-09 15:02:09,848 CRITICAL Transform executor raised TransformValidationExceptio
[2026-02-09 15:05:25] 2026-02-09 23:04:19,037 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-09 15:05:25] 2026-02-09 23:04:19,037 | INFO     | pilot state: failed 
[2026-02-09 15:05:25] 2026-02-09 23:04:19,037 | INFO     | transexitcode: 65
[2026-02-09 15:05:25] 2026-02-09 23:04:19,037 | INFO     | exeerrorcode: 65
[2026-02-09 15:05:25] 2026-02-09 23:04:19,037 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-02-09 15:05:25] 2026-02-09 23:04:19,037 | INFO     | exitcode: 65
[2026-02-09 15:05:25] 2026-02-09 23:04:19,037 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-02-09 15:05:25] 2026-02-09 23:04:19,037 | INFO     | cpuconsumptiontime: 14 s
[2026-02-09 15:05:25] 2026-02-09 23:04:19,037 | INFO     | nevents: 0
[2026-02-09 15:05:25] 2026-02-09 23:04:19,037 | INFO     | neventsw: 0
[2026-02-09 15:05:25] 2026-02-09 23:04:19,037 | INFO     | pid: 3988040
[2026-02-09 15:05:25] 2026-02-09 23:04:19,037 | INFO     | pgrp: 3988040
[2026-02-09 15:05:25] 2026-02-09 23:04:19,037 | INFO     | corecount: 8
[2026-02-09 15:05:25] 2026-02-09 23:04:19,037 | INFO     | event service: False
[2026-02-09 15:05:25] 2026-02-09 23:04:19,038 | INFO     | sizes: {0: 2282650, 2: 2283111, 57: 2306222, 59: 2310514, 60: 2310542, 177: 2310708}
[2026-02-09 15:05:25] 2026-02-09 23:04:19,038 | INFO     | --------------------------------------------------
[2026-02-09 15:05:25] 2026-02-09 23:04:19,038 | INFO     | 
[2026-02-09 15:05:25] 2026-02-09 23:04:19,038 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-02-09 15:05:25] 2026-02-09 23:04:19,160 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-09 15:05:25] 2026-02-09 23:04:19,161 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-09 15:05:25] 2026-02-09 23:04:19,161 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-09 15:05:25] 2026-02-09 23:04:19,161 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-09 15:05:25] 2026-02-09 23:04:19,161 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-09 15:05:25] 2026-02-09 23:04:19,161 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-09 15:05:25] 2026-02-09 23:04:19,161 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-09 15:05:25] 2026-02-09 23:04:19,161 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-09 15:05:25] 2026-02-09 23:04:19,161 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-09 15:05:25] 2026-02-09 23:04:19,161 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-09 15:05:25] 2026-02-09 23:04:19,161 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-09 15:05:25] 2026-02-09 23:04:19,161 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-09 15:05:25] 2026-02-09 23:04:19,161 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-09 15:05:25] 2026-02-09 23:04:19,162 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-09 15:05:25] 2026-02-09 23:04:19,162 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-09 15:05:25] 2026-02-09 23:04:19,162 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-09 15:05:25] 2026-02-09 23:04:19,162 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-09 15:05:25] 2026-02-09 23:04:19,162 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-09 15:05:25] 2026-02-09 23:04:19,162 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-09 15:05:25] 2026-02-09 23:04:19,162 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-09 15:05:25] 2026-02-09 23:04:19,162 | INFO     | job 7008292920 has completed (purged errors)
[2026-02-09 15:05:25] 2026-02-09 23:04:19,162 | INFO     | overall cleanup function is called
[2026-02-09 15:05:25] 2026-02-09 23:04:20,169 | INFO     | --- collectZombieJob: --- 10, [3988040]
[2026-02-09 15:05:25] 2026-02-09 23:04:20,169 | INFO     | zombie collector waiting for pid 3988040
[2026-02-09 15:05:25] 2026-02-09 23:04:20,169 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-09 15:05:25] 2026-02-09 23:04:20,169 | INFO     | collected zombie processes
[2026-02-09 15:05:25] 2026-02-09 23:04:20,169 | INFO     | will attempt to kill all subprocesses of pid=3988040
[2026-02-09 15:05:25] 2026-02-09 23:04:20,605 | INFO     | process IDs to be killed: [3988040] (in reverse order)
[2026-02-09 15:05:25] 2026-02-09 23:04:20,937 | WARNING  | found no corresponding commands to process id(s)
[2026-02-09 15:05:25] 2026-02-09 23:04:20,938 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-09 15:05:25] 2026-02-09 23:04:20,994 | INFO     | did not find any defunct processes belonging to 3988040
[2026-02-09 15:05:25] 2026-02-09 23:04:21,049 | INFO     | did not find any defunct processes belonging to 3988040
[2026-02-09 15:05:25] 2026-02-09 23:04:21,050 | INFO     | ready for new job
[2026-02-09 15:05:25] 2026-02-09 23:04:21,050 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-09 15:05:25] 2026-02-09 23:04:21,051 | INFO     | **************************************
[2026-02-09 15:05:25] 2026-02-09 23:04:21,051 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-09 15:05:25] 2026-02-09 23:04:21,051 | INFO     | **************************************
[2026-02-09 15:05:25] 2026-02-09 23:04:21,051 | INFO     | 
[2026-02-09 15:05:25] 2026-02-09 23:04:21,052 | INFO     | architecture information:
[2026-02-09 15:05:25] 2026-02-09 23:04:21,076 | INFO     | executing command: cat /etc/os-release
[2026-02-09 15:05:25] 2026-02-09 23:04:21,185 | INFO     | cat /etc/os-release:
[2026-02-09 15:05:25] NAME="CentOS Linux"
[2026-02-09 15:05:25] VERSION="7 (Core)"
[2026-02-09 15:05:25] ID="centos"
[2026-02-09 15:05:25] ID_LIKE="rhel fedora"
[2026-02-09 15:05:25] VERSION_ID="7"
[2026-02-09 15:05:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-09 15:05:25] ANSI_COLOR="0;31"
[2026-02-09 15:05:25] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-09 15:05:25] HOME_URL="https://www.centos.org/"
[2026-02-09 15:05:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-09 15:05:25] 
[2026-02-09 15:05:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-09 15:05:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-09 15:05:25] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-09 15:05:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-09 15:05:25] 
[2026-02-09 15:05:25] 2026-02-09 23:04:21,185 | INFO     | **************************************
[2026-02-09 15:05:25] 2026-02-09 23:04:21,688 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-02-09 15:05:25] 2026-02-09 23:04:21,700 | INFO     | sufficient remaining disk space (1235985891328 B)
[2026-02-09 15:05:25] 2026-02-09 23:04:21,700 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-09 15:05:25] 2026-02-09 23:04:21,701 | INFO     | current server update state: UPDATING_FINAL
[2026-02-09 15:05:25] 2026-02-09 23:04:21,701 | INFO     | update_server=False
[2026-02-09 15:05:25] 2026-02-09 23:04:21,701 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-09 15:05:25] 2026-02-09 23:04:21,701 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-09 15:05:25] 2026-02-09 23:04:21,747 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-09 15:05:25] 2026-02-09 23:04:21,747 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-09 15:05:25] 2026-02-09 23:04:21,747 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-09 15:05:25] 2026-02-09 23:04:21,747 | INFO     | will abort loop
[2026-02-09 15:05:25] 2026-02-09 23:04:21,800 | INFO     | all job control threads have been joined
[2026-02-09 15:05:25] 2026-02-09 23:04:21,890 | INFO     | all payload control threads have been joined
[2026-02-09 15:05:25] 2026-02-09 23:04:22,722 | INFO     | [job] retrieve thread has finished
[2026-02-09 15:05:25] 2026-02-09 23:04:22,751 | INFO     | [job] validate thread has finished
[2026-02-09 15:05:25] 2026-02-09 23:04:22,753 | INFO     | [job] job monitor thread has finished
[2026-02-09 15:05:25] 2026-02-09 23:04:22,776 | INFO     | all data control threads have been joined
[2026-02-09 15:05:25] 2026-02-09 23:04:22,806 | INFO     | [job] control thread has finished
[2026-02-09 15:05:25] 2026-02-09 23:04:22,891 | INFO     | [data] copytool_in thread has finished
[2026-02-09 15:05:25] 2026-02-09 23:04:22,892 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-09 15:05:25] 2026-02-09 23:04:22,896 | INFO     | [payload] control thread has finished
[2026-02-09 15:05:25] 2026-02-09 23:04:22,974 | INFO     | [payload] execute_payloads thread has finished
[2026-02-09 15:05:25] 2026-02-09 23:04:23,124 | INFO     | [payload] validate_pre thread has finished
[2026-02-09 15:05:25] 2026-02-09 23:04:23,291 | INFO     | [job] create_data_payload thread has finished
[2026-02-09 15:05:25] 2026-02-09 23:04:23,627 | INFO     | [payload] failed_post thread has finished
[2026-02-09 15:05:25] 2026-02-09 23:04:23,709 | INFO     | [data] copytool_out thread has finished
[2026-02-09 15:05:25] 2026-02-09 23:04:23,710 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-09 15:05:25] 2026-02-09 23:04:23,782 | INFO     | [data] control thread has finished
[2026-02-09 15:05:25] 2026-02-09 23:04:24,225 | INFO     | [payload] validate_post thread has finished
[2026-02-09 15:05:25] 2026-02-09 23:04:24,260 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-09 15:05:25] 2026-02-09 23:04:24,716 | INFO     | [job] queue monitor thread has finished
[2026-02-09 15:05:25] 2026-02-09 23:04:28,268 | INFO     | [data] queue_monitor thread has finished
[2026-02-09 15:05:25] 2026-02-09 23:04:50,977 | INFO     | PID=3983438 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-09 15:05:25] 2026-02-09 23:04:50,977 | INFO     | .. there are 33 such processes running
[2026-02-09 15:05:25] 2026-02-09 23:04:50,977 | INFO     | found 0 job(s) in 20 queues
[2026-02-09 15:05:25] 2026-02-09 23:04:50,977 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-09 15:05:25] 2026-02-09 23:04:50,977 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-09 15:05:25] 2026-02-09 23:05:18,424 | INFO     | [monitor] cgroup control has ended
[2026-02-09 15:05:25] 2026-02-09 23:05:20,072 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140174434981696)>', '<ExcThread(monitor, started 140173891327744)>']
[2026-02-09 15:05:25] 2026-02-09 23:05:20,171 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-09 15:05:25] 2026-02-09 23:05:20,171 | INFO     | [monitor] control thread has ended
[2026-02-09 15:05:25] 2026-02-09 23:05:25,098 | INFO     | all workflow threads have been joined
[2026-02-09 15:05:25] 2026-02-09 23:05:25,098 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-09 15:05:25] 2026-02-09 23:05:25,098 | INFO     | traces error code: 0
[2026-02-09 15:05:25] 2026-02-09 23:05:25,099 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-09 15:05:25] 2026-02-09 23:05:25,244 [wrapper] ==== pilot stdout END ====
[2026-02-09 15:05:25] 2026-02-09 23:05:25,254 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-09 15:05:25] 2026-02-09 23:05:25,276 [wrapper] pilotpid: 3983438
[2026-02-09 15:05:25] 2026-02-09 23:05:25,287 [wrapper] Pilot exit status: 0
[2026-02-09 15:05:25] 2026-02-09 23:05:25,367 [wrapper] pandaids: 7008292920
[2026-02-09 15:05:25] 2026-02-09 23:05:25,605 [wrapper] cleanup supervisor_pilot 3983444 3983439
[2026-02-09 15:05:25] 2026-02-09 23:05:25,618 [wrapper] Test setup, not cleaning
[2026-02-09 15:05:25] 2026-02-09 23:05:25,620 [wrapper] apfmon messages muted
[2026-02-09 15:05:25] 2026-02-09 23:05:25,622 [wrapper] ==== wrapper stdout END ====
[2026-02-09 15:05:25] 2026-02-09 23:05:25,624 [wrapper] ==== wrapper stderr END ====
[2026-02-09 15:05:25]  *** Error codes and diagnostics ***
[2026-02-09 15:05:25]     "exeErrorCode": 65,
[2026-02-09 15:05:25]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-02-09 15:05:25]     "pilotErrorCode": 1305,
[2026-02-09 15:05:25]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-02-09 15:05:25]  *** Listing of results directory ***
[2026-02-09 15:05:25] total 666800
[2026-02-09 15:05:25] -rw-r--r--. 1 boinc boinc      5111 Feb  8 13:52 queuedata.json
[2026-02-09 15:05:25] -rw-r--r--. 1 boinc boinc    584627 Feb  8 13:52 pilot3.tar.gz
[2026-02-09 15:05:25] -rwx------. 1 boinc boinc     36322 Feb  8 13:52 runpilot2-wrapper.sh
[2026-02-09 15:05:25] -rw-r--r--. 1 boinc boinc       100 Feb  9 15:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-09 15:05:25] -rwxr-xr-x. 1 boinc boinc      7986 Feb  9 15:00 run_atlas
[2026-02-09 15:05:25] -rw-r--r--. 1 boinc boinc       105 Feb  9 15:00 job.xml
[2026-02-09 15:05:25] -rw-r--r--. 2 boinc boinc 678655611 Feb  9 15:00 EVNT.48431094._000577.pool.root.1
[2026-02-09 15:05:25] -rw-r--r--. 1 boinc boinc      6444 Feb  9 15:00 init_data.xml
[2026-02-09 15:05:25] -rw-r--r--. 2 boinc boinc     15845 Feb  9 15:00 start_atlas.sh
[2026-02-09 15:05:25] drwxrwx--x. 2 boinc boinc      4096 Feb  9 15:00 shared
[2026-02-09 15:05:25] -rw-r--r--. 2 boinc boinc    597957 Feb  9 15:00 input.tar.gz
[2026-02-09 15:05:25] -rw-r--r--. 1 boinc boinc         0 Feb  9 15:00 boinc_lockfile
[2026-02-09 15:05:25] -rw-r--r--. 1 boinc boinc      2556 Feb  9 15:00 pandaJob.out
[2026-02-09 15:05:25] -rw-------. 1 boinc boinc   1009496 Feb  9 15:01 agis_schedconf.cvmfs.json
[2026-02-09 15:05:25] -rw-------. 1 boinc boinc   1513144 Feb  9 15:01 agis_ddmendpoints.agis.ALL.json
[2026-02-09 15:05:25] -rw-------. 1 boinc boinc       442 Feb  9 15:01 workernode_map.json
[2026-02-09 15:05:25] drwx------. 5 boinc boinc      4096 Feb  9 15:01 pilot3
[2026-02-09 15:05:25] -rw-r--r--. 1 boinc boinc       522 Feb  9 15:02 boinc_task_state.xml
[2026-02-09 15:05:25] -rw-------. 1 boinc boinc       950 Feb  9 15:02 memory_monitor_summary.json
[2026-02-09 15:05:25] -rw-------. 1 boinc boinc     21096 Feb  9 15:02 log.48431096._012020.job.log.tgz.1
[2026-02-09 15:05:25] -rw-------. 1 boinc boinc        95 Feb  9 15:04 pilot_heartbeat.json
[2026-02-09 15:05:25] -rw-------. 1 boinc boinc      7003 Feb  9 15:04 heartbeat.json
[2026-02-09 15:05:25] -rw-r--r--. 1 boinc boinc      8192 Feb  9 15:05 boinc_mmap_file
[2026-02-09 15:05:25] -rw-r--r--. 1 boinc boinc        22 Feb  9 15:05 wrapper_checkpoint.txt
[2026-02-09 15:05:25] -rw-------. 1 boinc boinc      5005 Feb  9 15:05 pilotlog.txt
[2026-02-09 15:05:25] -rw-------. 1 boinc boinc     83343 Feb  9 15:05 log.48431096._012020.job.log.1
[2026-02-09 15:05:25] -rw-------. 1 boinc boinc       188 Feb  9 15:05 output.list
[2026-02-09 15:05:25] -rw-r--r--. 1 boinc boinc       620 Feb  9 15:05 runtime_log
[2026-02-09 15:05:25] -rw-------. 1 boinc boinc    122880 Feb  9 15:05 result.tar.gz
[2026-02-09 15:05:25] -rw-------. 1 boinc boinc       647 Feb  9 15:05 XwgLDm7sR98nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmAQeKDmFhM6Qo.diag
[2026-02-09 15:05:25] -rw-r--r--. 1 boinc boinc      8633 Feb  9 15:05 runtime_log.err
[2026-02-09 15:05:25] -rw-r--r--. 1 boinc boinc     21962 Feb  9 15:05 stderr.txt
[2026-02-09 15:05:25] No HITS result produced
[2026-02-09 15:05:25]  *** Contents of shared directory: ***
[2026-02-09 15:05:25] total 663476
[2026-02-09 15:05:25] -rw-r--r--. 2 boinc boinc 678655611 Feb  9 15:00 ATLAS.root_0
[2026-02-09 15:05:25] -rw-r--r--. 2 boinc boinc     15845 Feb  9 15:00 start_atlas.sh
[2026-02-09 15:05:25] -rw-r--r--. 2 boinc boinc    597957 Feb  9 15:00 input.tar.gz
[2026-02-09 15:05:25] -rw-------. 1 boinc boinc    122880 Feb  9 15:05 result.tar.gz
15:05:26 (3979409): run_atlas exited; CPU time 20.882197
15:05:26 (3979409): called boinc_finish(0)

</stderr_txt>
]]>

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