Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:58:00 (820024): wrapper (7.7.26015): starting
19:58:00 (820024): wrapper: running run_atlas (--nthreads 12)
[2026-02-09 19:58:00] Arguments: --nthreads 12
[2026-02-09 19:58:00] Threads: 12
[2026-02-09 19:58:00] Checking for CVMFS
[2026-02-09 19:58:01] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-09 19:58:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-09 19:58:01] Running cvmfs_config stat atlas.cern.ch
[2026-02-09 19:58:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-09 19:58:02] 2.11.5.0 1139287 102134 226632 156074 1 212 39127622 45568000 22910 130560 0 621526267 99.815 359259734 18037 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-02-09 19:58:02] CVMFS is ok
[2026-02-09 19:58:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-09 19:58:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-09 19:58:02] Further information can be found at the LHC@home message board.
[2026-02-09 19:58:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-09 19:58:02] Checking for apptainer binary...
[2026-02-09 19:58:02] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-09 19:58:02] Running /usr/bin/apptainer --version
[2026-02-09 19:58:02] apptainer version 1.4.1-1.el9
[2026-02-09 19:58:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-09 19:58:02] wns0042.triumf.lcg
[2026-02-09 19:58:02] apptainer works
[2026-02-09 19:58:02] Set ATHENA_PROC_NUMBER=12
[2026-02-09 19:58:02] Set ATHENA_CORE_NUMBER=12
[2026-02-09 19:58:02] Starting ATLAS job with PandaID=7006911517
[2026-02-09 19:58:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-09 20:02:49]  *** The last 200 lines of the pilot log: ***
[2026-02-09 20:02:49] 2026-02-10 04:02:04,680 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-09 20:02:49] 2026-02-10 04:02:04,681 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-09 20:02:49] 2026-02-10 04:02:04,681 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-09 20:02:49] 2026-02-10 04:02:04,682 | WARNING  | wrong length of table data, x=[1770695958.0], y=[3357.0] (must be same and length>=4)
[2026-02-09 20:02:49] 2026-02-10 04:02:04,682 | INFO     | could have reported an average CPU frequency of 1500 MHz (4 samples)
[2026-02-09 20:02:49] 2026-02-10 04:02:04,682 | INFO     | ..............................
[2026-02-09 20:02:49] 2026-02-10 04:02:04,682 | INFO     | . Timing measurements:
[2026-02-09 20:02:49] 2026-02-10 04:02:04,682 | INFO     | . get job = 0 s
[2026-02-09 20:02:49] 2026-02-10 04:02:04,683 | INFO     | . initial setup = 18 s
[2026-02-09 20:02:49] 2026-02-10 04:02:04,683 | INFO     | . payload setup = 19 s
[2026-02-09 20:02:49] 2026-02-10 04:02:04,683 | INFO     | . stage-in = 0 s
[2026-02-09 20:02:49] 2026-02-10 04:02:04,683 | INFO     | . payload execution = 60 s
[2026-02-09 20:02:49] 2026-02-10 04:02:04,683 | INFO     | . stage-out = 1 s
[2026-02-09 20:02:49] 2026-02-10 04:02:04,683 | INFO     | . log creation = 0 s
[2026-02-09 20:02:49] 2026-02-10 04:02:04,683 | INFO     | ..............................
[2026-02-09 20:02:49] 2026-02-10 04:02:04,683 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-09 20:02:49] 2026-02-10 04:02:04,684 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7006911517/pilotlog.txt
[2026-02-09 20:02:49] 2026-02-10 04:02:04,739 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-02-09 20:02:49] - Log from pilotlog.txt -
[2026-02-09 20:02:49] 2026-02-10 04:02:04,670 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7006911517/memory_monitor_summary.json (trf name=prmon)
[2026-02-09 20:02:49] 2026-02-10 04:02:04,671 | INFO     | extracted standard info from prmon json
[2026-02-09 20:02:49] 2026-02-10 04:02:04,680 | INFO     | extracted standard memory fields from prmon json
[2026-02-09 20:02:49] 2026-02-10 04:02:04,680 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-09 20:02:49] 2026-02-10 04:02:04,681 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-09 20:02:49] 2026-02-10 04:02:04,681 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-09 20:02:49] 2026-02-10 04:02:04,682 | WARNING  | wrong length of table data, x=[1770695958.0], y=[3357.0] (must be same and length>=4)
[2026-02-09 20:02:49] 2026-02-10 04:02:04,682 | INFO     | could have reported an average CPU frequency of 1500 MHz (4 samples)
[2026-02-09 20:02:49] 2026-02-10 04:02:04,682 | INFO     | ..............................
[2026-02-09 20:02:49] 2026-02-10 04:02:04,682 | INFO     | . Timing measurements:
[2026-02-09 20:02:49] 2026-02-10 04:02:04,682 | INFO     | . get job = 0 s
[2026-02-09 20:02:49] 2026-02-10 04:02:04,683 | INFO     | . initial setup = 18 s
[2026-02-09 20:02:49] 2026-02-10 04:02:04,683 | INFO     | . payload setup = 19 s
[2026-02-09 20:02:49] 2026-02-10 04:02:04,683 | INFO     | . stage-in = 0 s
[2026-02-09 20:02:49] 2026-02-10 04:02:04,683 | INFO     | . payload execution = 60 s
[2026-02-09 20:02:49] 2026-02-10 04:02:04,683 | INFO     | . stage-out = 1 s
[2026-02-09 20:02:49] 2026-02-10 04:02:04,683 | INFO     | . log creation = 0 s
[2026-02-09 20:02:49] 2026-02-10 04:02:04,683 | INFO     | ..............................
[2026-02-09 20:02:49] 2026-02-10 04:02:04,683 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-09 20:02:49] 2026-02-10 04:02:04,684 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7006911517/pilotlog.txt
[2026-02-09 20:02:49] 2026-02-10 04:02:04,739 | WARNING  | 
[2026-02-09 20:02:49] [begin log extracts]
[2026-02-09 20:02:49] - Log from pilotlog.txt -
[2026-02-09 20:02:49] 2026-02-10 04:02:04,670 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7006911517/memory_monitor_summary.json (trf name=prmon)
[2026-02-09 20:02:49] 2026-02-10 04:02:04,671 | INFO     | extracted standard info from prmon json
[2026-02-09 20:02:49] 2026-02-10 04:02:04,680 | INFO     | extracted standard memory fields from prmon json
[2026-02-09 20:02:49] 2026-02-10 04:02:04,680 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-09 20:02:49] 2026-02-10 04:02:04,681 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-09 20:02:49] 2026-02-10 04:02:04,681 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-09 20:02:49] 2026-02-10 04:02:04,682 | WARNING  | wrong length of table data, x=[1770695958.0], y=[3357.0] (must be same and length>=4)
[2026-02-09 20:02:49] 2026-02-10 04:02:04,682 | INFO     | could have reported an average CPU frequency of 1500 MHz (4 samples)
[2026-02-09 20:02:49] 2026-02-10 04:02:04,682 | INFO     | ..............................
[2026-02-09 20:02:49] 2026-02-10 04:02:04,682 | INFO     | . Timing measurements:
[2026-02-09 20:02:49] 2026-02-10 04:02:04,682 | INFO     | . get job = 0 s
[2026-02-09 20:02:49] 2026-02-10 04:02:04,683 | INFO     | . initial setup = 18 s
[2026-02-09 20:02:49] 2026-02-10 04:02:04,683 | INFO     | . payload setup = 19 s
[2026-02-09 20:02:49] 2026-02-10 04:02:04,683 | INFO     | . stage-in = 0 s
[2026-02-09 20:02:49] 2026-02-10 04:02:04,683 | INFO     | . payload execution = 60 s
[2026-02-09 20:02:49] 2026-02-10 04:02:04,683 | INFO     | . stage-out = 1 s
[2026-02-09 20:02:49] 2026-02-10 04:02:04,683 | INFO     | . log creation = 0 s
[2026-02-09 20:02:49] 2026-02-10 04:02:04,683 | INFO     | ..............................
[2026-02-09 20:02:49] 2026-02-10 04:02:04,683 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-09 20:02:49] 2026-02-10 04:02:04,684 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7006911517/pilotlog.txt
[2026-02-09 20:02:49] [end log extracts]
[2026-02-09 20:02:49] 2026-02-10 04:02:04,739 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-02-09 20:02:49] 2026-02-10 04:02:04,741 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-02-09 20:02:49] 2026-02-10 04:02:05,363 | INFO     | 
[2026-02-09 20:02:49] 2026-02-10 04:02:05,363 | INFO     | job summary report
[2026-02-09 20:02:49] 2026-02-10 04:02:05,363 | INFO     | --------------------------------------------------
[2026-02-09 20:02:49] 2026-02-10 04:02:05,364 | INFO     | PanDA job id: 7006911517
[2026-02-09 20:02:49] 2026-02-10 04:02:05,364 | INFO     | task id: 48318034
[2026-02-09 20:02:49] 2026-02-10 04:02:05,364 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-02-09 19:59:56,759 CRITICAL Transform executor raised TransformValidationExceptio
[2026-02-09 20:02:49] 2026-02-10 04:02:05,364 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-09 20:02:49] 2026-02-10 04:02:05,364 | INFO     | pilot state: failed 
[2026-02-09 20:02:49] 2026-02-10 04:02:05,364 | INFO     | transexitcode: 65
[2026-02-09 20:02:49] 2026-02-10 04:02:05,364 | INFO     | exeerrorcode: 65
[2026-02-09 20:02:49] 2026-02-10 04:02:05,364 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-02-09 20:02:49] 2026-02-10 04:02:05,364 | INFO     | exitcode: 65
[2026-02-09 20:02:49] 2026-02-10 04:02:05,364 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-02-09 20:02:49] 2026-02-10 04:02:05,365 | INFO     | cpuconsumptiontime: 22 s
[2026-02-09 20:02:49] 2026-02-10 04:02:05,365 | INFO     | nevents: 0
[2026-02-09 20:02:49] 2026-02-10 04:02:05,365 | INFO     | neventsw: 0
[2026-02-09 20:02:49] 2026-02-10 04:02:05,365 | INFO     | pid: 849572
[2026-02-09 20:02:49] 2026-02-10 04:02:05,365 | INFO     | pgrp: 849572
[2026-02-09 20:02:49] 2026-02-10 04:02:05,365 | INFO     | corecount: 12
[2026-02-09 20:02:49] 2026-02-10 04:02:05,365 | INFO     | event service: False
[2026-02-09 20:02:49] 2026-02-10 04:02:05,365 | INFO     | sizes: {0: 2282620, 1: 2283081, 84: 2306365, 86: 2310657, 87: 2310685, 203: 2310851}
[2026-02-09 20:02:49] 2026-02-10 04:02:05,365 | INFO     | --------------------------------------------------
[2026-02-09 20:02:49] 2026-02-10 04:02:05,365 | INFO     | 
[2026-02-09 20:02:49] 2026-02-10 04:02:05,366 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-02-09 20:02:49] 2026-02-10 04:02:05,426 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-09 20:02:49] 2026-02-10 04:02:05,427 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-09 20:02:49] 2026-02-10 04:02:05,427 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-09 20:02:49] 2026-02-10 04:02:05,427 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-09 20:02:49] 2026-02-10 04:02:05,427 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-09 20:02:49] 2026-02-10 04:02:05,427 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-09 20:02:49] 2026-02-10 04:02:05,427 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-09 20:02:49] 2026-02-10 04:02:05,427 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-09 20:02:49] 2026-02-10 04:02:05,427 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-09 20:02:49] 2026-02-10 04:02:05,428 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-09 20:02:49] 2026-02-10 04:02:05,428 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-09 20:02:49] 2026-02-10 04:02:05,428 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-09 20:02:49] 2026-02-10 04:02:05,428 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-09 20:02:49] 2026-02-10 04:02:05,428 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-09 20:02:49] 2026-02-10 04:02:05,428 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-09 20:02:49] 2026-02-10 04:02:05,428 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-09 20:02:49] 2026-02-10 04:02:05,428 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-09 20:02:49] 2026-02-10 04:02:05,428 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-09 20:02:49] 2026-02-10 04:02:05,428 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-09 20:02:49] 2026-02-10 04:02:05,429 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-09 20:02:49] 2026-02-10 04:02:05,429 | INFO     | job 7006911517 has completed (purged errors)
[2026-02-09 20:02:49] 2026-02-10 04:02:05,429 | INFO     | overall cleanup function is called
[2026-02-09 20:02:49] 2026-02-10 04:02:06,439 | INFO     | --- collectZombieJob: --- 10, [849572]
[2026-02-09 20:02:49] 2026-02-10 04:02:06,440 | INFO     | zombie collector waiting for pid 849572
[2026-02-09 20:02:49] 2026-02-10 04:02:06,441 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-09 20:02:49] 2026-02-10 04:02:06,441 | INFO     | collected zombie processes
[2026-02-09 20:02:49] 2026-02-10 04:02:06,441 | INFO     | will attempt to kill all subprocesses of pid=849572
[2026-02-09 20:02:49] 2026-02-10 04:02:07,801 | INFO     | process IDs to be killed: [849572] (in reverse order)
[2026-02-09 20:02:49] 2026-02-10 04:02:08,027 | WARNING  | found no corresponding commands to process id(s)
[2026-02-09 20:02:49] 2026-02-10 04:02:08,029 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-09 20:02:49] 2026-02-10 04:02:08,103 | INFO     | did not find any defunct processes belonging to 849572
[2026-02-09 20:02:49] 2026-02-10 04:02:08,158 | INFO     | did not find any defunct processes belonging to 849572
[2026-02-09 20:02:49] 2026-02-10 04:02:08,159 | INFO     | ready for new job
[2026-02-09 20:02:49] 2026-02-10 04:02:08,159 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-09 20:02:49] 2026-02-10 04:02:08,161 | INFO     | **************************************
[2026-02-09 20:02:49] 2026-02-10 04:02:08,162 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-09 20:02:49] 2026-02-10 04:02:08,162 | INFO     | **************************************
[2026-02-09 20:02:49] 2026-02-10 04:02:08,162 | INFO     | 
[2026-02-09 20:02:49] 2026-02-10 04:02:08,182 | INFO     | architecture information:
[2026-02-09 20:02:49] 2026-02-10 04:02:08,190 | INFO     | executing command: cat /etc/os-release
[2026-02-09 20:02:49] 2026-02-10 04:02:08,238 | INFO     | cat /etc/os-release:
[2026-02-09 20:02:49] NAME="CentOS Linux"
[2026-02-09 20:02:49] VERSION="7 (Core)"
[2026-02-09 20:02:49] ID="centos"
[2026-02-09 20:02:49] ID_LIKE="rhel fedora"
[2026-02-09 20:02:49] VERSION_ID="7"
[2026-02-09 20:02:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-09 20:02:49] ANSI_COLOR="0;31"
[2026-02-09 20:02:49] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-09 20:02:49] HOME_URL="https://www.centos.org/"
[2026-02-09 20:02:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-09 20:02:49] 
[2026-02-09 20:02:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-09 20:02:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-09 20:02:49] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-09 20:02:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-09 20:02:49] 
[2026-02-09 20:02:49] 2026-02-10 04:02:08,239 | INFO     | **************************************
[2026-02-09 20:02:49] 2026-02-10 04:02:08,742 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-02-09 20:02:49] 2026-02-10 04:02:08,805 | INFO     | sufficient remaining disk space (2076864151552 B)
[2026-02-09 20:02:49] 2026-02-10 04:02:08,805 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-09 20:02:49] 2026-02-10 04:02:08,806 | INFO     | current server update state: UPDATING_FINAL
[2026-02-09 20:02:49] 2026-02-10 04:02:08,806 | INFO     | update_server=False
[2026-02-09 20:02:49] 2026-02-10 04:02:08,806 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-09 20:02:49] 2026-02-10 04:02:08,949 | INFO     | all data control threads have been joined
[2026-02-09 20:02:49] 2026-02-10 04:02:08,954 | INFO     | all job control threads have been joined
[2026-02-09 20:02:49] 2026-02-10 04:02:09,264 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-09 20:02:49] 2026-02-10 04:02:09,356 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-09 20:02:49] 2026-02-10 04:02:09,356 | INFO     | aborting loop
[2026-02-09 20:02:49] 2026-02-10 04:02:09,815 | INFO     | [job] retrieve thread has finished
[2026-02-09 20:02:49] 2026-02-10 04:02:09,955 | INFO     | [data] control thread has finished
[2026-02-09 20:02:49] 2026-02-10 04:02:09,960 | INFO     | [job] control thread has finished
[2026-02-09 20:02:49] 2026-02-10 04:02:10,155 | INFO     | all payload control threads have been joined
[2026-02-09 20:02:49] 2026-02-10 04:02:10,161 | INFO     | [job] validate thread has finished
[2026-02-09 20:02:49] 2026-02-10 04:02:10,257 | INFO     | [payload] execute_payloads thread has finished
[2026-02-09 20:02:49] 2026-02-10 04:02:10,362 | INFO     | [job] job monitor thread has finished
[2026-02-09 20:02:49] 2026-02-10 04:02:10,384 | INFO     | [payload] validate_post thread has finished
[2026-02-09 20:02:49] 2026-02-10 04:02:10,392 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-09 20:02:49] 2026-02-10 04:02:10,423 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-09 20:02:49] 2026-02-10 04:02:10,825 | INFO     | [data] copytool_in thread has finished
[2026-02-09 20:02:49] 2026-02-10 04:02:10,861 | INFO     | [job] create_data_payload thread has finished
[2026-02-09 20:02:49] 2026-02-10 04:02:11,160 | INFO     | [payload] control thread has finished
[2026-02-09 20:02:49] 2026-02-10 04:02:11,270 | INFO     | [data] copytool_out thread has finished
[2026-02-09 20:02:49] 2026-02-10 04:02:11,283 | INFO     | [payload] validate_pre thread has finished
[2026-02-09 20:02:49] 2026-02-10 04:02:11,285 | INFO     | [payload] failed_post thread has finished
[2026-02-09 20:02:49] 2026-02-10 04:02:11,398 | INFO     | [job] queue monitor thread has finished
[2026-02-09 20:02:49] 2026-02-10 04:02:12,069 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-09 20:02:49] 2026-02-10 04:02:16,078 | INFO     | [data] queue_monitor thread has finished
[2026-02-09 20:02:49] 2026-02-10 04:02:38,246 | INFO     | PID=830569 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-09 20:02:49] 2026-02-10 04:02:38,247 | INFO     | .. there are 41 such processes running
[2026-02-09 20:02:49] 2026-02-10 04:02:38,248 | INFO     | found 0 job(s) in 20 queues
[2026-02-09 20:02:49] 2026-02-10 04:02:38,248 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-09 20:02:49] 2026-02-10 04:02:38,248 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-09 20:02:49] 2026-02-10 04:02:40,433 | INFO     | [monitor] cgroup control has ended
[2026-02-09 20:02:49] 2026-02-10 04:02:42,377 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140543861847872)>', '<ExcThread(monitor, started 140543300445952)>']
[2026-02-09 20:02:49] 2026-02-10 04:02:43,281 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-09 20:02:49] 2026-02-10 04:02:43,281 | INFO     | [monitor] control thread has ended
[2026-02-09 20:02:49] 2026-02-10 04:02:47,403 | INFO     | all workflow threads have been joined
[2026-02-09 20:02:49] 2026-02-10 04:02:47,403 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-09 20:02:49] 2026-02-10 04:02:47,404 | INFO     | traces error code: 0
[2026-02-09 20:02:49] 2026-02-10 04:02:47,404 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-09 20:02:49] 2026-02-10 04:02:48,156 [wrapper] ==== pilot stdout END ====
[2026-02-09 20:02:49] 2026-02-10 04:02:48,202 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-09 20:02:49] 2026-02-10 04:02:48,225 [wrapper] pilotpid: 830569
[2026-02-09 20:02:49] 2026-02-10 04:02:48,242 [wrapper] Pilot exit status: 0
[2026-02-09 20:02:49] 2026-02-10 04:02:48,367 [wrapper] pandaids: 7006911517
[2026-02-09 20:02:49] 2026-02-10 04:02:48,699 [wrapper] cleanup supervisor_pilot  830590 830571
[2026-02-09 20:02:49] 2026-02-10 04:02:48,726 [wrapper] Test setup, not cleaning
[2026-02-09 20:02:49] 2026-02-10 04:02:48,758 [wrapper] apfmon messages muted
[2026-02-09 20:02:49] 2026-02-10 04:02:48,761 [wrapper] ==== wrapper stdout END ====
[2026-02-09 20:02:49] 2026-02-10 04:02:48,764 [wrapper] ==== wrapper stderr END ====
[2026-02-09 20:02:49]  *** Error codes and diagnostics ***
[2026-02-09 20:02:49]     "exeErrorCode": 65,
[2026-02-09 20:02:49]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-02-09 20:02:49]     "pilotErrorCode": 1305,
[2026-02-09 20:02:49]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-02-09 20:02:49]  *** Listing of results directory ***
[2026-02-09 20:02:49] total 485456
[2026-02-09 20:02:49] -rwx------. 1 boinc boinc     36322 Feb  9 14:33 runpilot2-wrapper.sh
[2026-02-09 20:02:49] -rw-r--r--. 1 boinc boinc      5111 Feb  9 14:35 queuedata.json
[2026-02-09 20:02:49] -rw-r--r--. 1 boinc boinc    584627 Feb  9 14:35 pilot3.tar.gz
[2026-02-09 20:02:49] -rw-r--r--. 1 boinc boinc       100 Feb  9 19:57 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-09 20:02:49] -rwxr-xr-x. 1 boinc boinc      7986 Feb  9 19:57 run_atlas
[2026-02-09 20:02:49] -rw-r--r--. 1 boinc boinc       105 Feb  9 19:57 job.xml
[2026-02-09 20:02:49] -rw-r--r--. 2 boinc boinc 492955440 Feb  9 19:58 EVNT.48318032._000259.pool.root.1
[2026-02-09 20:02:49] -rw-r--r--. 1 boinc boinc      6594 Feb  9 19:58 init_data.xml
[2026-02-09 20:02:49] -rw-r--r--. 2 boinc boinc     15845 Feb  9 19:58 start_atlas.sh
[2026-02-09 20:02:49] drwxrwx--x. 2 boinc boinc      4096 Feb  9 19:58 shared
[2026-02-09 20:02:49] -rw-r--r--. 2 boinc boinc    597952 Feb  9 19:58 input.tar.gz
[2026-02-09 20:02:49] -rw-r--r--. 1 boinc boinc         0 Feb  9 19:58 boinc_lockfile
[2026-02-09 20:02:49] -rw-r--r--. 1 boinc boinc      2538 Feb  9 19:58 pandaJob.out
[2026-02-09 20:02:49] -rw-------. 1 boinc boinc   1009496 Feb  9 19:58 agis_schedconf.cvmfs.json
[2026-02-09 20:02:49] -rw-------. 1 boinc boinc   1513144 Feb  9 19:58 agis_ddmendpoints.agis.ALL.json
[2026-02-09 20:02:49] -rw-------. 1 boinc boinc       445 Feb  9 19:58 workernode_map.json
[2026-02-09 20:02:49] drwx------. 5 boinc boinc      4096 Feb  9 19:58 pilot3
[2026-02-09 20:02:49] -rw-r--r--. 1 boinc boinc       525 Feb  9 19:59 boinc_task_state.xml
[2026-02-09 20:02:49] -rw-------. 1 boinc boinc       986 Feb  9 20:00 memory_monitor_summary.json
[2026-02-09 20:02:49] -rw-------. 1 boinc boinc     22038 Feb  9 20:00 log.48318034._014084.job.log.tgz.1
[2026-02-09 20:02:49] -rw-------. 1 boinc boinc      7070 Feb  9 20:02 heartbeat.json
[2026-02-09 20:02:49] -rw-------. 1 boinc boinc        95 Feb  9 20:02 pilot_heartbeat.json
[2026-02-09 20:02:49] -rw-------. 1 boinc boinc      4818 Feb  9 20:02 pilotlog.txt
[2026-02-09 20:02:49] -rw-r--r--. 1 boinc boinc      8192 Feb  9 20:02 boinc_mmap_file
[2026-02-09 20:02:49] -rw-r--r--. 1 boinc boinc        23 Feb  9 20:02 wrapper_checkpoint.txt
[2026-02-09 20:02:49] -rw-------. 1 boinc boinc     86324 Feb  9 20:02 log.48318034._014084.job.log.1
[2026-02-09 20:02:49] -rw-------. 1 boinc boinc       188 Feb  9 20:02 output.list
[2026-02-09 20:02:49] -rw-r--r--. 1 boinc boinc       620 Feb  9 20:02 runtime_log
[2026-02-09 20:02:49] -rw-------. 1 boinc boinc    122880 Feb  9 20:02 result.tar.gz
[2026-02-09 20:02:49] -rw-r--r--. 1 boinc boinc      8635 Feb  9 20:02 runtime_log.err
[2026-02-09 20:02:49] -rw-------. 1 boinc boinc       643 Feb  9 20:02 J1nLDmE0o98nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmNrgKDmnTGONm.diag
[2026-02-09 20:02:49] -rw-r--r--. 1 boinc boinc     21755 Feb  9 20:02 stderr.txt
[2026-02-09 20:02:49] No HITS result produced
[2026-02-09 20:02:49]  *** Contents of shared directory: ***
[2026-02-09 20:02:49] total 482128
[2026-02-09 20:02:49] -rw-r--r--. 2 boinc boinc 492955440 Feb  9 19:58 ATLAS.root_0
[2026-02-09 20:02:49] -rw-r--r--. 2 boinc boinc     15845 Feb  9 19:58 start_atlas.sh
[2026-02-09 20:02:49] -rw-r--r--. 2 boinc boinc    597952 Feb  9 19:58 input.tar.gz
[2026-02-09 20:02:49] -rw-------. 1 boinc boinc    122880 Feb  9 20:02 result.tar.gz
20:02:50 (820024): run_atlas exited; CPU time 30.405224
20:02:50 (820024): called boinc_finish(0)

</stderr_txt>
]]>

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