Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
03:30:15 (3406198): wrapper (7.7.26015): starting
03:30:15 (3406198): wrapper: running run_atlas (--nthreads 4)
[2026-02-10 03:30:15] Arguments: --nthreads 4
[2026-02-10 03:30:15] Threads: 4
[2026-02-10 03:30:15] Checking for CVMFS
[2026-02-10 03:30:15] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-10 03:30:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-10 03:30:16] Running cvmfs_config stat atlas.cern.ch
[2026-02-10 03:30:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-10 03:30:16] 2.13.3.0 832320 5832 53028 156083 3 50 4087337 6144000 6454 130560 0 13399812 99.997 206551 1024 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://192.168.1.30:3128 1
[2026-02-10 03:30:16] CVMFS is ok
[2026-02-10 03:30:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-10 03:30:16] Checking for apptainer binary...
[2026-02-10 03:30:16] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-10 03:30:16] Running /usr/bin/apptainer --version
[2026-02-10 03:30:16] apptainer version 1.4.5
[2026-02-10 03:30:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-10 03:30:16] Starfish-Cruncher
[2026-02-10 03:30:16] apptainer works
[2026-02-10 03:30:16] Set ATHENA_PROC_NUMBER=4
[2026-02-10 03:30:16] Set ATHENA_CORE_NUMBER=4
[2026-02-10 03:30:16] Starting ATLAS job with PandaID=6992459645
[2026-02-10 03:30:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-10 06:29:57]  *** The last 200 lines of the pilot log: ***
[2026-02-10 06:29:57] 2026-02-10 12:29:18,555 | INFO     | job 6992459645 has finished - writing final server update
[2026-02-10 06:29:57] 2026-02-10 12:29:18,555 | INFO     | total number of processed events: 400 (read)
[2026-02-10 06:29:57] 2026-02-10 12:29:18,560 | INFO     | using path: /var/lib/boinc-client/slots/5/PanDA_Pilot-6992459645/memory_monitor_summary.json (trf name=prmon)
[2026-02-10 06:29:57] 2026-02-10 12:29:18,560 | INFO     | extracted standard info from prmon json
[2026-02-10 06:29:57] 2026-02-10 12:29:18,560 | INFO     | extracted standard memory fields from prmon json
[2026-02-10 06:29:57] 2026-02-10 12:29:18,560 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-10 06:29:57] 2026-02-10 12:29:18,560 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-10 06:29:57] 2026-02-10 12:29:18,560 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-10 06:29:57] 2026-02-10 12:29:18,563 | INFO     | fitting pss+swap vs Time
[2026-02-10 06:29:57] 2026-02-10 12:29:18,563 | INFO     | sum of square deviations: 1690450300.0
[2026-02-10 06:29:57] 2026-02-10 12:29:18,564 | INFO     | sum of deviations: -48938565861.500015
[2026-02-10 06:29:57] 2026-02-10 12:29:18,564 | INFO     | mean x: 1770721190.5
[2026-02-10 06:29:57] 2026-02-10 12:29:18,564 | INFO     | mean y: 2403505.8011363638
[2026-02-10 06:29:57] 2026-02-10 12:29:18,564 | INFO     | intersect: 51264813056.462265
[2026-02-10 06:29:57] 2026-02-10 12:29:18,564 | INFO     | chi2: 2.4375778726152983
[2026-02-10 06:29:57] 2026-02-10 12:29:18,564 | INFO     | sum of square deviations: 1550429070.0
[2026-02-10 06:29:57] 2026-02-10 12:29:18,565 | INFO     | sum of deviations: -35737307439.0
[2026-02-10 06:29:57] 2026-02-10 12:29:18,565 | INFO     | mean x: 1770721038.0
[2026-02-10 06:29:57] 2026-02-10 12:29:18,565 | INFO     | mean y: 2417598.4619883043
[2026-02-10 06:29:57] 2026-02-10 12:29:18,565 | INFO     | intersect: 40817443160.199684
[2026-02-10 06:29:57] 2026-02-10 12:29:18,566 | INFO     | chi2: 1.592505408569436
[2026-02-10 06:29:57] 2026-02-10 12:29:18,566 | INFO     | current chi2=1.592505408569436 (change=34.668531969367486 %)
[2026-02-10 06:29:57] 2026-02-10 12:29:18,566 | INFO     | sum of square deviations: 1418361477.5
[2026-02-10 06:29:57] 2026-02-10 12:29:18,567 | INFO     | sum of deviations: -34135280756.5
[2026-02-10 06:29:57] 2026-02-10 12:29:18,567 | INFO     | mean x: 1770720885.5
[2026-02-10 06:29:57] 2026-02-10 12:29:18,567 | INFO     | mean y: 2419448.8975903615
[2026-02-10 06:29:57] 2026-02-10 12:29:18,567 | INFO     | intersect: 42617828515.47723
[2026-02-10 06:29:57] 2026-02-10 12:29:18,567 | INFO     | chi2: 1.5857871117023883
[2026-02-10 06:29:57] 2026-02-10 12:29:18,567 | INFO     | current chi2=1.5857871117023883 (change=0.4218696420681377 %)
[2026-02-10 06:29:57] 2026-02-10 12:29:18,567 | INFO     | right removable region: 165
[2026-02-10 06:29:57] 2026-02-10 12:29:18,567 | INFO     | sum of square deviations: 1550429070.0
[2026-02-10 06:29:57] 2026-02-10 12:29:18,568 | INFO     | sum of deviations: -66677427562.99999
[2026-02-10 06:29:57] 2026-02-10 12:29:18,568 | INFO     | mean x: 1770721343.0
[2026-02-10 06:29:57] 2026-02-10 12:29:18,568 | INFO     | mean y: 2422420.8947368423
[2026-02-10 06:29:57] 2026-02-10 12:29:18,568 | INFO     | intersect: 76153693295.95679
[2026-02-10 06:29:57] 2026-02-10 12:29:18,569 | INFO     | chi2: 1.2034975711272518
[2026-02-10 06:29:57] 2026-02-10 12:29:18,569 | INFO     | current chi2=1.2034975711272518 (change=50.6273180172903 %)
[2026-02-10 06:29:57] 2026-02-10 12:29:18,569 | INFO     | sum of square deviations: 1418361477.5
[2026-02-10 06:29:57] 2026-02-10 12:29:18,570 | INFO     | sum of deviations: -59659309395.5
[2026-02-10 06:29:57] 2026-02-10 12:29:18,570 | INFO     | mean x: 1770721495.5
[2026-02-10 06:29:57] 2026-02-10 12:29:18,570 | INFO     | mean y: 2414307.921686747
[2026-02-10 06:29:57] 2026-02-10 12:29:18,570 | INFO     | intersect: 74482737715.67369
[2026-02-10 06:29:57] 2026-02-10 12:29:18,570 | INFO     | chi2: 1.1986629778447417
[2026-02-10 06:29:57] 2026-02-10 12:29:18,570 | INFO     | current chi2=1.1986629778447417 (change=0.4017119268451625 %)
[2026-02-10 06:29:57] 2026-02-10 12:29:18,570 | INFO     | left removable region: 20
[2026-02-10 06:29:57] 2026-02-10 12:29:18,570 | INFO     | sum of square deviations: 945282840.0
[2026-02-10 06:29:57] 2026-02-10 12:29:18,571 | INFO     | sum of deviations: -30811265980.999996
[2026-02-10 06:29:57] 2026-02-10 12:29:18,571 | INFO     | mean x: 1770721465.0
[2026-02-10 06:29:57] 2026-02-10 12:29:18,571 | INFO     | mean y: 2412088.668965517
[2026-02-10 06:29:57] 2026-02-10 12:29:18,571 | INFO     | intersect: 57718650792.82335
[2026-02-10 06:29:57] 2026-02-10 12:29:18,571 | INFO     | chi2: 0.28240989943379613
[2026-02-10 06:29:57] 2026-02-10 12:29:18,572 | INFO     | current memory leak: -32.59 B/s (using 145 data points, chi2=0.28)
[2026-02-10 06:29:57] 2026-02-10 12:29:18,572 | INFO     | could have reported an average CPU frequency of 3608 MHz (9 samples)
[2026-02-10 06:29:57] 2026-02-10 12:29:18,572 | INFO     | ..............................
[2026-02-10 06:29:57] 2026-02-10 12:29:18,572 | INFO     | . Timing measurements:
[2026-02-10 06:29:57] 2026-02-10 12:29:18,572 | INFO     | . get job = 0 s
[2026-02-10 06:29:57] 2026-02-10 12:29:18,572 | INFO     | . initial setup = 6 s
[2026-02-10 06:29:57] 2026-02-10 12:29:18,572 | INFO     | . payload setup = 4 s
[2026-02-10 06:29:57] 2026-02-10 12:29:18,572 | INFO     | . stage-in = 0 s
[2026-02-10 06:29:57] 2026-02-10 12:29:18,572 | INFO     | . payload execution = 10702 s
[2026-02-10 06:29:57] 2026-02-10 12:29:18,572 | INFO     | . stage-out = 0 s
[2026-02-10 06:29:57] 2026-02-10 12:29:18,572 | INFO     | . log creation = 0 s
[2026-02-10 06:29:57] 2026-02-10 12:29:18,572 | INFO     | ..............................
[2026-02-10 06:29:57] 2026-02-10 12:29:18,642 | INFO     | 
[2026-02-10 06:29:57] 2026-02-10 12:29:18,642 | INFO     | job summary report
[2026-02-10 06:29:57] 2026-02-10 12:29:18,642 | INFO     | --------------------------------------------------
[2026-02-10 06:29:57] 2026-02-10 12:29:18,643 | INFO     | PanDA job id: 6992459645
[2026-02-10 06:29:57] 2026-02-10 12:29:18,643 | INFO     | task id: 48431113
[2026-02-10 06:29:57] 2026-02-10 12:29:18,643 | INFO     | errors: (none)
[2026-02-10 06:29:57] 2026-02-10 12:29:18,643 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-10 06:29:57] 2026-02-10 12:29:18,643 | INFO     | pilot state: finished 
[2026-02-10 06:29:57] 2026-02-10 12:29:18,643 | INFO     | transexitcode: 0
[2026-02-10 06:29:57] 2026-02-10 12:29:18,643 | INFO     | exeerrorcode: 0
[2026-02-10 06:29:57] 2026-02-10 12:29:18,643 | INFO     | exeerrordiag: 
[2026-02-10 06:29:57] 2026-02-10 12:29:18,643 | INFO     | exitcode: 0
[2026-02-10 06:29:57] 2026-02-10 12:29:18,643 | INFO     | exitmsg: OK
[2026-02-10 06:29:57] 2026-02-10 12:29:18,643 | INFO     | cpuconsumptiontime: 41050 s
[2026-02-10 06:29:57] 2026-02-10 12:29:18,643 | INFO     | nevents: 400
[2026-02-10 06:29:57] 2026-02-10 12:29:18,643 | INFO     | neventsw: 0
[2026-02-10 06:29:57] 2026-02-10 12:29:18,643 | INFO     | pid: 3415218
[2026-02-10 06:29:57] 2026-02-10 12:29:18,643 | INFO     | pgrp: 3415218
[2026-02-10 06:29:57] 2026-02-10 12:29:18,643 | INFO     | corecount: 4
[2026-02-10 06:29:57] 2026-02-10 12:29:18,644 | INFO     | event service: False
[2026-02-10 06:29:57] 2026-02-10 12:29:18,644 | INFO     | sizes: {0: 2282036, 1: 2282242, 11: 2282270, 10710: 2311387, 10711: 2320399, 10712: 2320455, 10714: 2320841}
[2026-02-10 06:29:57] 2026-02-10 12:29:18,644 | INFO     | --------------------------------------------------
[2026-02-10 06:29:57] 2026-02-10 12:29:18,644 | INFO     | 
[2026-02-10 06:29:57] 2026-02-10 12:29:18,644 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/5
[2026-02-10 06:29:57] 2026-02-10 12:29:18,660 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-10 06:29:57] 2026-02-10 12:29:18,661 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-10 06:29:57] 2026-02-10 12:29:18,661 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-10 06:29:57] 2026-02-10 12:29:18,661 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-10 06:29:57] 2026-02-10 12:29:18,661 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-10 06:29:57] 2026-02-10 12:29:18,661 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-10 06:29:57] 2026-02-10 12:29:18,661 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-10 06:29:57] 2026-02-10 12:29:18,661 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-10 06:29:57] 2026-02-10 12:29:18,661 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-10 06:29:57] 2026-02-10 12:29:18,661 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-10 06:29:57] 2026-02-10 12:29:18,661 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-10 06:29:57] 2026-02-10 12:29:18,661 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-10 06:29:57] 2026-02-10 12:29:18,661 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-10 06:29:57] 2026-02-10 12:29:18,661 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-10 06:29:57] 2026-02-10 12:29:18,662 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-10 06:29:57] 2026-02-10 12:29:18,662 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-10 06:29:57] 2026-02-10 12:29:18,662 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-10 06:29:57] 2026-02-10 12:29:18,662 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-10 06:29:57] 2026-02-10 12:29:18,662 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-10 06:29:57] 2026-02-10 12:29:18,662 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-10 06:29:57] 2026-02-10 12:29:18,662 | INFO     | job 6992459645 has completed (purged errors)
[2026-02-10 06:29:57] 2026-02-10 12:29:18,662 | INFO     | overall cleanup function is called
[2026-02-10 06:29:57] 2026-02-10 12:29:19,671 | INFO     | --- collectZombieJob: --- 10, [3415218]
[2026-02-10 06:29:57] 2026-02-10 12:29:19,671 | INFO     | zombie collector waiting for pid 3415218
[2026-02-10 06:29:57] 2026-02-10 12:29:19,671 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-10 06:29:57] 2026-02-10 12:29:19,672 | INFO     | collected zombie processes
[2026-02-10 06:29:57] 2026-02-10 12:29:19,672 | INFO     | will attempt to kill all subprocesses of pid=3415218
[2026-02-10 06:29:57] 2026-02-10 12:29:19,838 | INFO     | process IDs to be killed: [3415218] (in reverse order)
[2026-02-10 06:29:57] 2026-02-10 12:29:19,900 | WARNING  | found no corresponding commands to process id(s)
[2026-02-10 06:29:57] 2026-02-10 12:29:19,900 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-10 06:29:57] 2026-02-10 12:29:19,905 | INFO     | did not find any defunct processes belonging to 3415218
[2026-02-10 06:29:57] 2026-02-10 12:29:19,909 | INFO     | did not find any defunct processes belonging to 3415218
[2026-02-10 06:29:57] 2026-02-10 12:29:19,909 | INFO     | ready for new job
[2026-02-10 06:29:57] 2026-02-10 12:29:19,909 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-10 06:29:57] 2026-02-10 12:29:19,910 | INFO     | **************************************
[2026-02-10 06:29:57] 2026-02-10 12:29:19,911 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-10 06:29:57] 2026-02-10 12:29:19,911 | INFO     | **************************************
[2026-02-10 06:29:57] 2026-02-10 12:29:19,911 | INFO     | 
[2026-02-10 06:29:57] 2026-02-10 12:29:19,912 | INFO     | architecture information:
[2026-02-10 06:29:57] 2026-02-10 12:29:19,912 | INFO     | executing command: cat /etc/os-release
[2026-02-10 06:29:57] 2026-02-10 12:29:19,926 | INFO     | cat /etc/os-release:
[2026-02-10 06:29:57] NAME="CentOS Linux"
[2026-02-10 06:29:57] VERSION="7 (Core)"
[2026-02-10 06:29:57] ID="centos"
[2026-02-10 06:29:57] ID_LIKE="rhel fedora"
[2026-02-10 06:29:57] VERSION_ID="7"
[2026-02-10 06:29:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-10 06:29:57] ANSI_COLOR="0;31"
[2026-02-10 06:29:57] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-10 06:29:57] HOME_URL="https://www.centos.org/"
[2026-02-10 06:29:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-10 06:29:57] 
[2026-02-10 06:29:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-10 06:29:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-10 06:29:57] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-10 06:29:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-10 06:29:57] 
[2026-02-10 06:29:57] 2026-02-10 12:29:19,926 | INFO     | **************************************
[2026-02-10 06:29:57] 2026-02-10 12:29:20,429 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/5
[2026-02-10 06:29:57] 2026-02-10 12:29:20,443 | INFO     | sufficient remaining disk space (1789627727872 B)
[2026-02-10 06:29:57] 2026-02-10 12:29:20,443 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-10 06:29:57] 2026-02-10 12:29:20,443 | INFO     | current server update state: UPDATING_FINAL
[2026-02-10 06:29:57] 2026-02-10 12:29:20,443 | INFO     | update_server=False
[2026-02-10 06:29:57] 2026-02-10 12:29:20,443 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-10 06:29:57] 2026-02-10 12:29:20,443 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-10 06:29:57] 2026-02-10 12:29:20,561 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-10 06:29:57] 2026-02-10 12:29:20,561 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-10 06:29:57] 2026-02-10 12:29:20,561 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-10 06:29:57] 2026-02-10 12:29:20,562 | INFO     | will abort loop
[2026-02-10 06:29:57] 2026-02-10 12:29:20,895 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-10 06:29:57] 2026-02-10 12:29:21,009 | INFO     | all payload control threads have been joined
[2026-02-10 06:29:57] 2026-02-10 12:29:21,231 | INFO     | all data control threads have been joined
[2026-02-10 06:29:57] 2026-02-10 12:29:21,448 | INFO     | [job] retrieve thread has finished
[2026-02-10 06:29:57] 2026-02-10 12:29:21,449 | INFO     | [job] queue monitor thread has finished
[2026-02-10 06:29:57] 2026-02-10 12:29:21,484 | INFO     | [payload] execute_payloads thread has finished
[2026-02-10 06:29:57] 2026-02-10 12:29:21,542 | INFO     | all job control threads have been joined
[2026-02-10 06:29:57] 2026-02-10 12:29:21,566 | INFO     | [job] job monitor thread has finished
[2026-02-10 06:29:57] 2026-02-10 12:29:21,814 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-10 06:29:57] 2026-02-10 12:29:22,014 | INFO     | [payload] control thread has finished
[2026-02-10 06:29:57] 2026-02-10 12:29:22,167 | INFO     | [payload] validate_post thread has finished
[2026-02-10 06:29:57] 2026-02-10 12:29:22,235 | INFO     | [data] control thread has finished
[2026-02-10 06:29:57] 2026-02-10 12:29:22,474 | INFO     | [job] validate thread has finished
[2026-02-10 06:29:57] 2026-02-10 12:29:22,516 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-10 06:29:57] 2026-02-10 12:29:22,547 | INFO     | [job] control thread has finished
[2026-02-10 06:29:57] 2026-02-10 12:29:22,582 | INFO     | [job] create_data_payload thread has finished
[2026-02-10 06:29:57] 2026-02-10 12:29:22,691 | INFO     | [payload] validate_pre thread has finished
[2026-02-10 06:29:57] 2026-02-10 12:29:22,850 | INFO     | [data] copytool_in thread has finished
[2026-02-10 06:29:57] 2026-02-10 12:29:22,900 | INFO     | [data] copytool_out thread has finished
[2026-02-10 06:29:57] 2026-02-10 12:29:23,013 | INFO     | [payload] failed_post thread has finished
[2026-02-10 06:29:57] 2026-02-10 12:29:26,522 | INFO     | [data] queue_monitor thread has finished
[2026-02-10 06:29:57] 2026-02-10 12:29:50,576 | INFO     | [monitor] cgroup control has ended
[2026-02-10 06:29:57] 2026-02-10 12:29:51,324 | INFO     | PID=3410488 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-10 06:29:57] 2026-02-10 12:29:51,324 | INFO     | .. there are 8 such processes running
[2026-02-10 06:29:57] 2026-02-10 12:29:51,324 | INFO     | found 0 job(s) in 20 queues
[2026-02-10 06:29:57] 2026-02-10 12:29:51,324 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-10 06:29:57] 2026-02-10 12:29:51,324 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-10 06:29:57] 2026-02-10 12:29:51,837 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 128237831071552)>', '<ExcThread(monitor, started 128237472552704)>']
[2026-02-10 06:29:57] 2026-02-10 12:29:52,327 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-10 06:29:57] 2026-02-10 12:29:52,327 | INFO     | [monitor] control thread has ended
[2026-02-10 06:29:57] 2026-02-10 12:29:56,864 | INFO     | all workflow threads have been joined
[2026-02-10 06:29:57] 2026-02-10 12:29:56,864 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-10 06:29:57] 2026-02-10 12:29:56,865 | INFO     | traces error code: 0
[2026-02-10 06:29:57] 2026-02-10 12:29:56,865 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-10 06:29:57] 2026-02-10 12:29:56,940 [wrapper] ==== pilot stdout END ====
[2026-02-10 06:29:57] 2026-02-10 12:29:56,942 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-10 06:29:57] 2026-02-10 12:29:56,944 [wrapper] pilotpid: 3410488
[2026-02-10 06:29:57] 2026-02-10 12:29:56,946 [wrapper] Pilot exit status: 0
[2026-02-10 06:29:57] 2026-02-10 12:29:56,955 [wrapper] pandaids: 6992459645
[2026-02-10 06:29:57] 2026-02-10 12:29:56,999 [wrapper] cleanup supervisor_pilot 3608833 3410489
[2026-02-10 06:29:57] 2026-02-10 12:29:57,007 [wrapper] Test setup, not cleaning
[2026-02-10 06:29:57] 2026-02-10 12:29:57,009 [wrapper] apfmon messages muted
[2026-02-10 06:29:57] 2026-02-10 12:29:57,011 [wrapper] ==== wrapper stdout END ====
[2026-02-10 06:29:57] 2026-02-10 12:29:57,013 [wrapper] ==== wrapper stderr END ====
[2026-02-10 06:29:57]  *** Error codes and diagnostics ***
[2026-02-10 06:29:57]     "exeErrorCode": 0,
[2026-02-10 06:29:57]     "exeErrorDiag": "",
[2026-02-10 06:29:57]     "pilotErrorCode": 0,
[2026-02-10 06:29:57]     "pilotErrorDiag": "",
[2026-02-10 06:29:57]  *** Listing of results directory ***
[2026-02-10 06:29:57] total 901372
[2026-02-10 06:29:57] -rw-r--r-- 1 boinc boinc    584422 Feb  1 11:33 pilot3.tar.gz
[2026-02-10 06:29:57] -rwx------ 1 boinc boinc     36322 Feb  1 11:34 runpilot2-wrapper.sh
[2026-02-10 06:29:57] -rw-r--r-- 1 boinc boinc      5111 Feb  1 11:35 queuedata.json
[2026-02-10 06:29:57] -rw-r--r-- 1 boinc boinc       100 Feb 10 03:30 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-10 06:29:57] -rwxr-xr-x 1 boinc boinc      7986 Feb 10 03:30 run_atlas
[2026-02-10 06:29:57] -rw-r--r-- 1 boinc boinc       105 Feb 10 03:30 job.xml
[2026-02-10 06:29:57] -rw-r--r-- 1 boinc boinc      9665 Feb 10 03:30 init_data.xml
[2026-02-10 06:29:57] -rw-r--r-- 2 boinc boinc 656446823 Feb 10 03:30 EVNT.48431111._000011.pool.root.1
[2026-02-10 06:29:57] -rw-r--r-- 2 boinc boinc     15845 Feb 10 03:30 start_atlas.sh
[2026-02-10 06:29:57] drwxrwx--x 2 boinc boinc      4096 Feb 10 03:30 shared
[2026-02-10 06:29:57] -rw-r--r-- 2 boinc boinc    597761 Feb 10 03:30 input.tar.gz
[2026-02-10 06:29:57] -rw-r--r-- 1 boinc boinc         0 Feb 10 03:30 boinc_lockfile
[2026-02-10 06:29:57] -rw-r--r-- 1 boinc boinc      2539 Feb 10 03:30 pandaJob.out
[2026-02-10 06:29:57] -rw------- 1 boinc boinc   1009496 Feb 10 03:30 agis_schedconf.cvmfs.json
[2026-02-10 06:29:57] -rw------- 1 boinc boinc   1512955 Feb 10 03:30 agis_ddmendpoints.agis.ALL.json
[2026-02-10 06:29:57] -rw------- 1 boinc boinc       433 Feb 10 03:30 workernode_map.json
[2026-02-10 06:29:57] drwx------ 5 boinc boinc      4096 Feb 10 03:30 pilot3
[2026-02-10 06:29:57] -rw------- 1 boinc boinc 258862942 Feb 10 06:28 HITS.48431113._000501.pool.root.1
[2026-02-10 06:29:57] -rw-r--r-- 1 boinc boinc       531 Feb 10 06:28 boinc_task_state.xml
[2026-02-10 06:29:57] -rw------- 1 boinc boinc      1026 Feb 10 06:29 memory_monitor_summary.json
[2026-02-10 06:29:57] -rw------- 1 boinc boinc    338146 Feb 10 06:29 log.48431113._000501.job.log.tgz.1
[2026-02-10 06:29:57] -rw------- 1 boinc boinc        95 Feb 10 06:29 pilot_heartbeat.json
[2026-02-10 06:29:57] -rw------- 1 boinc boinc      6314 Feb 10 06:29 heartbeat.json
[2026-02-10 06:29:57] -rw-r--r-- 1 boinc boinc      8192 Feb 10 06:29 boinc_mmap_file
[2026-02-10 06:29:57] -rw-r--r-- 1 boinc boinc        28 Feb 10 06:29 wrapper_checkpoint.txt
[2026-02-10 06:29:57] -rw------- 1 boinc boinc      5014 Feb 10 06:29 pilotlog.txt
[2026-02-10 06:29:57] -rw------- 1 boinc boinc   1535327 Feb 10 06:29 log.48431113._000501.job.log.1
[2026-02-10 06:29:57] -rw------- 1 boinc boinc       357 Feb 10 06:29 output.list
[2026-02-10 06:29:57] -rw-r--r-- 1 boinc boinc       620 Feb 10 06:29 runtime_log
[2026-02-10 06:29:57] -rw------- 1 boinc boinc   1894400 Feb 10 06:29 result.tar.gz
[2026-02-10 06:29:57] -rw-r--r-- 1 boinc boinc      8933 Feb 10 06:29 runtime_log.err
[2026-02-10 06:29:57] -rw------- 1 boinc boinc       655 Feb 10 06:29 K8DMDmdWq68n9Rq4apOajLDm4fhM0noT9bVooX4SDmTRQKDmodNJbn.diag
[2026-02-10 06:29:57] -rw-r--r-- 1 boinc boinc     20778 Feb 10 06:29 stderr.txt
[2026-02-10 06:29:57] HITS file was successfully produced:
[2026-02-10 06:29:57] -rw------- 1 boinc boinc 258862942 Feb 10 06:28 shared/HITS.pool.root.1
[2026-02-10 06:29:57]  *** Contents of shared directory: ***
[2026-02-10 06:29:57] total 896320
[2026-02-10 06:29:57] -rw-r--r-- 2 boinc boinc 656446823 Feb 10 03:30 ATLAS.root_0
[2026-02-10 06:29:57] -rw-r--r-- 2 boinc boinc     15845 Feb 10 03:30 start_atlas.sh
[2026-02-10 06:29:57] -rw-r--r-- 2 boinc boinc    597761 Feb 10 03:30 input.tar.gz
[2026-02-10 06:29:57] -rw------- 1 boinc boinc 258862942 Feb 10 06:28 HITS.pool.root.1
[2026-02-10 06:29:57] -rw------- 1 boinc boinc   1894400 Feb 10 06:29 result.tar.gz
06:29:58 (3406198): run_atlas exited; CPU time 41218.440416
06:29:58 (3406198): called boinc_finish(0)

</stderr_txt>
]]>

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