Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:00:17 (99570): wrapper (7.7.26015): starting
17:00:17 (99570): wrapper: running run_atlas (--nthreads 10)
[2026-02-09 17:00:17] Arguments: --nthreads 10
[2026-02-09 17:00:17] Threads: 10
[2026-02-09 17:00:17] Checking for CVMFS
[2026-02-09 17:00:17] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-09 17:00:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-09 17:00:17] Running cvmfs_config stat atlas.cern.ch
[2026-02-09 17:00:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-09 17:00:18] 2.13.3.0 10223 138600 287504 156065 0 572 40617954 40960001 32416 16776704 0 1517637892 99.714 1152097285 49610 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-02-09 17:00:18] CVMFS is ok
[2026-02-09 17:00:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-09 17:00:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-09 17:00:18] Further information can be found at the LHC@home message board.
[2026-02-09 17:00:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-09 17:00:18] Checking for apptainer binary...
[2026-02-09 17:00:18] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-09 17:00:18] Running /usr/bin/apptainer --version
[2026-02-09 17:00:18] apptainer version 1.4.5-2.el9
[2026-02-09 17:00:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-09 17:00:19] c8-7-6.aglt2.org
[2026-02-09 17:00:19] apptainer works
[2026-02-09 17:00:19] Set ATHENA_PROC_NUMBER=10
[2026-02-09 17:00:19] Set ATHENA_CORE_NUMBER=10
[2026-02-09 17:00:19] Starting ATLAS job with PandaID=7006309588
[2026-02-09 17:00:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-09 18:19:51]  *** The last 200 lines of the pilot log: ***
[2026-02-09 18:19:51] 2026-02-09 23:02:04,981 | INFO     | transferring file log.48318018._006022.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-7006309588/log.48318018._006022.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-02-09 18:19:51] 2026-02-09 23:02:04,981 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-7006309588/log.48318018._006022.job.log.tgz.1 /tmp/boinchome/slots/1/log.48318018._006022.job
[2026-02-09 18:19:51] 2026-02-09 23:02:05,006 | INFO     | adding to output.list: log.48318018._006022.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/52/eb/log.48318018._006022.job.log.tg
[2026-02-09 18:19:51] 2026-02-09 23:02:05,007 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-09 18:19:51] 2026-02-09 23:02:05,007 | INFO     | summary of transferred files:
[2026-02-09 18:19:51] 2026-02-09 23:02:05,007 | INFO     |  -- lfn=log.48318018._006022.job.log.tgz.1, status_code=0, status=transferred
[2026-02-09 18:19:51] 2026-02-09 23:02:05,007 | INFO     | stage-out finished correctly
[2026-02-09 18:19:51] 2026-02-09 23:02:05,944 | INFO     | time since job start (3646s) is within the limit (349056.0s)
[2026-02-09 18:19:51] 2026-02-09 23:02:07,951 | INFO     | time since job start (3648s) is within the limit (349056.0s)
[2026-02-09 18:19:51] 2026-02-09 23:02:08,262 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-09 18:19:51] 2026-02-09 23:02:08,665 | WARNING  | process 111156 can no longer be monitored (due to stat problems) - aborting
[2026-02-09 18:19:51] 2026-02-09 23:02:08,665 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-7006309588/memory_monitor_summary.json (trf name=prmon)
[2026-02-09 18:19:51] 2026-02-09 23:02:08,666 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-7006309588/memory_monitor_summary.json (trf name=prmon)
[2026-02-09 18:19:51] 2026-02-09 23:02:08,666 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-02-09 18:19:51] 2026-02-09 23:02:08,666 | WARNING  | maxPSS not found in memory monitor output
[2026-02-09 18:19:51] 2026-02-09 23:02:08,666 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 4347355 B
[2026-02-09 18:19:51] 2026-02-09 23:02:08,666 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15588 B
[2026-02-09 18:19:51] 2026-02-09 23:02:08,666 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-02-09 18:19:51] 2026-02-09 23:02:08,710 | INFO     | sufficient remaining disk space (163974217728 B)
[2026-02-09 18:19:51] 2026-02-09 23:02:08,710 | INFO     | work directory size check will use 5033164800 B as a max limit (20% grace limit added, divider=1)
[2026-02-09 18:19:51] 2026-02-09 23:02:08,711 | INFO     | size of work directory /tmp/boinchome/slots/1/PanDA_Pilot-7006309588: 4639456 B (within 5033164800 B limit)
[2026-02-09 18:19:51] 2026-02-09 23:02:08,711 | INFO     | pfn file=/tmp/boinchome/slots/1/PanDA_Pilot-7006309588/HITS.48318018._006022.pool.root.1 does not exist (skip from workdir size calculation)
[2026-02-09 18:19:51] 2026-02-09 23:02:08,711 | INFO     | total size of present files: 0 B (workdir size: 4639456 B)
[2026-02-09 18:19:51] 2026-02-09 23:02:08,711 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/1/PanDA_Pilot-7006309588/HITS.48318018._006022.pool.root.1 since it does not exist
[2026-02-09 18:19:51] 2026-02-09 23:02:09,462 | INFO     | number of running child processes to parent process 111156: 1
[2026-02-09 18:19:51] 2026-02-09 23:02:09,463 | INFO     | maximum number of monitored processes: 6
[2026-02-09 18:19:51] 2026-02-09 23:02:09,794 | INFO     | PID=105321 has CPU usage=13.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-09 18:19:51] 2026-02-09 23:02:09,794 | INFO     | .. there are 37 such processes running
[2026-02-09 18:19:51] 2026-02-09 23:02:10,799 | INFO     | time since job start (3651s) is within the limit (349056.0s)
[2026-02-09 18:19:51] 2026-02-09 23:02:11,205 | INFO     | job 7006309588 has state=finished
[2026-02-09 18:19:51] 2026-02-09 23:02:11,206 | INFO     | preparing for final server update for job 7006309588 in state='finished'
[2026-02-09 18:19:51] 2026-02-09 23:02:11,206 | INFO     | reading metadata from: /tmp/boinchome/slots/1/PanDA_Pilot-7006309588/jobReport.json
[2026-02-09 18:19:51] 2026-02-09 23:02:11,207 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/1/workernode_map.json
[2026-02-09 18:19:51] 2026-02-09 23:02:11,208 | INFO     | this job has now completed (state=finished)
[2026-02-09 18:19:51] 2026-02-09 23:02:11,208 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-09 18:19:51] 2026-02-09 23:02:11,208 | INFO     | log transfer has been attempted: DONE
[2026-02-09 18:19:51] 2026-02-09 23:02:11,208 | INFO     | job 7006309588 has finished - writing final server update
[2026-02-09 18:19:51] 2026-02-09 23:02:11,208 | INFO     | total number of processed events: 400 (read)
[2026-02-09 18:19:51] 2026-02-09 23:02:11,220 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-7006309588/memory_monitor_summary.json (trf name=prmon)
[2026-02-09 18:19:51] 2026-02-09 23:02:11,221 | INFO     | extracted standard info from prmon json
[2026-02-09 18:19:51] 2026-02-09 23:02:11,221 | INFO     | extracted standard memory fields from prmon json
[2026-02-09 18:19:51] 2026-02-09 23:02:11,221 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-09 18:19:51] 2026-02-09 23:02:11,221 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-09 18:19:51] 2026-02-09 23:02:11,221 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-09 18:19:51] 2026-02-09 23:02:11,222 | INFO     | fitting pss+swap vs Time
[2026-02-09 18:19:51] 2026-02-09 23:02:11,222 | INFO     | sum of square deviations: 43584073.0
[2026-02-09 18:19:51] 2026-02-09 23:02:11,222 | INFO     | sum of deviations: 655054477.9999999
[2026-02-09 18:19:51] 2026-02-09 23:02:11,222 | INFO     | mean x: 1770676395.5
[2026-02-09 18:19:51] 2026-02-09 23:02:11,222 | INFO     | mean y: 2579347.6923076925
[2026-02-09 18:19:51] 2026-02-09 23:02:11,222 | INFO     | intersect: -26610112448.257416
[2026-02-09 18:19:51] 2026-02-09 23:02:11,222 | INFO     | chi2: 0.02982352920050104
[2026-02-09 18:19:51] 2026-02-09 23:02:11,222 | INFO     | current memory leak: 15.03 B/s (using 52 data points, chi2=0.03)
[2026-02-09 18:19:51] 2026-02-09 23:02:11,223 | INFO     | could have reported an average CPU frequency of 3799 MHz (6 samples)
[2026-02-09 18:19:51] 2026-02-09 23:02:11,223 | INFO     | ..............................
[2026-02-09 18:19:51] 2026-02-09 23:02:11,223 | INFO     | . Timing measurements:
[2026-02-09 18:19:51] 2026-02-09 23:02:11,223 | INFO     | . get job = 0 s
[2026-02-09 18:19:51] 2026-02-09 23:02:11,223 | INFO     | . initial setup = 26 s
[2026-02-09 18:19:51] 2026-02-09 23:02:11,223 | INFO     | . payload setup = 31 s
[2026-02-09 18:19:51] 2026-02-09 23:02:11,223 | INFO     | . stage-in = 0 s
[2026-02-09 18:19:51] 2026-02-09 23:02:11,223 | INFO     | . payload execution = 3607 s
[2026-02-09 18:19:51] 2026-02-09 23:02:11,223 | INFO     | . stage-out = 0 s
[2026-02-09 18:19:51] 2026-02-09 23:02:11,223 | INFO     | . log creation = 0 s
[2026-02-09 18:19:51] 2026-02-09 23:02:11,223 | INFO     | ..............................
[2026-02-09 18:19:51] 2026-02-09 23:02:11,735 | INFO     | 
[2026-02-09 18:19:51] 2026-02-09 23:02:11,735 | INFO     | job summary report
[2026-02-09 18:19:51] 2026-02-09 23:02:11,735 | INFO     | --------------------------------------------------
[2026-02-09 18:19:51] 2026-02-09 23:02:11,735 | INFO     | PanDA job id: 7006309588
[2026-02-09 18:19:51] 2026-02-09 23:02:11,735 | INFO     | task id: 48318018
[2026-02-09 18:19:51] 2026-02-09 23:02:11,735 | INFO     | errors: (none)
[2026-02-09 18:19:51] 2026-02-09 23:02:11,735 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-09 18:19:51] 2026-02-09 23:02:11,735 | INFO     | pilot state: finished 
[2026-02-09 18:19:51] 2026-02-09 23:02:11,735 | INFO     | transexitcode: 0
[2026-02-09 18:19:51] 2026-02-09 23:02:11,735 | INFO     | exeerrorcode: 0
[2026-02-09 18:19:51] 2026-02-09 23:02:11,735 | INFO     | exeerrordiag: 
[2026-02-09 18:19:51] 2026-02-09 23:02:11,735 | INFO     | exitcode: 0
[2026-02-09 18:19:51] 2026-02-09 23:02:11,735 | INFO     | exitmsg: OK
[2026-02-09 18:19:51] 2026-02-09 23:02:11,736 | INFO     | cpuconsumptiontime: 24037 s
[2026-02-09 18:19:51] 2026-02-09 23:02:11,736 | INFO     | nevents: 400
[2026-02-09 18:19:51] 2026-02-09 23:02:11,736 | INFO     | neventsw: 0
[2026-02-09 18:19:51] 2026-02-09 23:02:11,736 | INFO     | pid: 111156
[2026-02-09 18:19:51] 2026-02-09 23:02:11,736 | INFO     | pgrp: 111156
[2026-02-09 18:19:51] 2026-02-09 23:02:11,736 | INFO     | corecount: 10
[2026-02-09 18:19:51] 2026-02-09 23:02:11,736 | INFO     | event service: False
[2026-02-09 18:19:51] 2026-02-09 23:02:11,736 | INFO     | sizes: {0: 2282655, 1: 2283116, 3643: 2308817, 3644: 2317815, 3647: 2317871, 3650: 2318093}
[2026-02-09 18:19:51] 2026-02-09 23:02:11,736 | INFO     | --------------------------------------------------
[2026-02-09 18:19:51] 2026-02-09 23:02:11,736 | INFO     | 
[2026-02-09 18:19:51] 2026-02-09 23:02:11,736 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-02-09 18:19:51] 2026-02-09 23:02:11,754 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-09 18:19:51] 2026-02-09 23:02:11,754 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-09 18:19:51] 2026-02-09 23:02:11,754 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-09 18:19:51] 2026-02-09 23:02:11,754 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-09 18:19:51] 2026-02-09 23:02:11,754 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-09 18:19:51] 2026-02-09 23:02:11,754 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-09 18:19:51] 2026-02-09 23:02:11,754 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-09 18:19:51] 2026-02-09 23:02:11,754 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-09 18:19:51] 2026-02-09 23:02:11,754 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-09 18:19:51] 2026-02-09 23:02:11,754 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-09 18:19:51] 2026-02-09 23:02:11,754 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-09 18:19:51] 2026-02-09 23:02:11,754 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-09 18:19:51] 2026-02-09 23:02:11,754 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-09 18:19:51] 2026-02-09 23:02:11,754 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-09 18:19:51] 2026-02-09 23:02:11,754 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-09 18:19:51] 2026-02-09 23:02:11,755 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-09 18:19:51] 2026-02-09 23:02:11,755 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-09 18:19:51] 2026-02-09 23:02:11,755 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-09 18:19:51] 2026-02-09 23:02:11,755 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-09 18:19:51] 2026-02-09 23:02:11,755 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-09 18:19:51] 2026-02-09 23:02:11,755 | INFO     | job 7006309588 has completed (purged errors)
[2026-02-09 18:19:51] 2026-02-09 23:02:11,755 | INFO     | overall cleanup function is called
[2026-02-09 18:19:51] 2026-02-09 23:02:12,763 | INFO     | --- collectZombieJob: --- 10, [111156]
[2026-02-09 18:19:51] 2026-02-09 23:02:12,763 | INFO     | zombie collector waiting for pid 111156
[2026-02-09 18:19:51] 2026-02-09 23:02:12,763 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-09 18:19:51] 2026-02-09 23:02:12,763 | INFO     | collected zombie processes
[2026-02-09 18:19:51] 2026-02-09 23:02:12,763 | INFO     | will attempt to kill all subprocesses of pid=111156
[2026-02-09 18:19:51] 2026-02-09 23:02:13,216 | INFO     | process IDs to be killed: [111156] (in reverse order)
[2026-02-09 18:19:51] 2026-02-09 23:02:13,377 | WARNING  | found no corresponding commands to process id(s)
[2026-02-09 18:19:51] 2026-02-09 23:02:13,377 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-09 18:19:51] 2026-02-09 23:02:13,400 | INFO     | did not find any defunct processes belonging to 111156
[2026-02-09 18:19:51] 2026-02-09 23:02:13,418 | INFO     | did not find any defunct processes belonging to 111156
[2026-02-09 18:19:51] 2026-02-09 23:02:13,419 | INFO     | ready for new job
[2026-02-09 18:19:51] 2026-02-09 23:02:13,419 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-09 18:19:51] 2026-02-09 23:02:13,420 | INFO     | **************************************
[2026-02-09 18:19:51] 2026-02-09 23:02:13,421 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-09 18:19:51] 2026-02-09 23:02:13,422 | INFO     | **************************************
[2026-02-09 18:19:51] 2026-02-09 23:02:13,422 | INFO     | 
[2026-02-09 18:19:51] 2026-02-09 23:02:13,426 | INFO     | architecture information:
[2026-02-09 18:19:51] 2026-02-09 23:02:13,426 | INFO     | executing command: cat /etc/os-release
[2026-02-09 18:19:51] 2026-02-09 23:02:13,457 | INFO     | cat /etc/os-release:
[2026-02-09 18:19:51] NAME="CentOS Linux"
[2026-02-09 18:19:51] VERSION="7 (Core)"
[2026-02-09 18:19:51] ID="centos"
[2026-02-09 18:19:51] ID_LIKE="rhel fedora"
[2026-02-09 18:19:51] VERSION_ID="7"
[2026-02-09 18:19:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-09 18:19:51] ANSI_COLOR="0;31"
[2026-02-09 18:19:51] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-09 18:19:51] HOME_URL="https://www.centos.org/"
[2026-02-09 18:19:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-09 18:19:51] 
[2026-02-09 18:19:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-09 18:19:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-09 18:19:51] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-09 18:19:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-09 18:19:51] 
[2026-02-09 18:19:51] 2026-02-09 23:02:13,457 | INFO     | **************************************
[2026-02-09 18:19:51] 2026-02-09 23:02:13,960 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-02-09 18:19:51] 2026-02-09 23:02:13,989 | INFO     | sufficient remaining disk space (163978412032 B)
[2026-02-09 18:19:51] 2026-02-09 23:02:13,989 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-09 18:19:51] 2026-02-09 23:02:13,989 | INFO     | current server update state: UPDATING_FINAL
[2026-02-09 18:19:51] 2026-02-09 23:02:13,989 | INFO     | update_server=False
[2026-02-09 18:19:51] 2026-02-09 23:02:13,989 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-09 18:19:51] 2026-02-09 23:02:13,989 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-09 18:19:51] 2026-02-09 23:02:14,212 | INFO     | all data control threads have been joined
[2026-02-09 18:19:51] 2026-02-09 23:02:14,350 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-09 18:19:51] 2026-02-09 23:02:14,492 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-09 18:19:51] 2026-02-09 23:02:14,492 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-09 18:19:51] 2026-02-09 23:02:14,492 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-09 18:19:51] 2026-02-09 23:02:14,492 | INFO     | will abort loop
[2026-02-09 18:19:51] 2026-02-09 23:02:14,995 | INFO     | [job] retrieve thread has finished
[2026-02-09 18:19:51] 2026-02-09 23:02:15,116 | INFO     | [payload] failed_post thread has finished
[2026-02-09 18:19:51] 2026-02-09 23:02:15,136 | INFO     | [job] validate thread has finished
[2026-02-09 18:19:51] 2026-02-09 23:02:15,219 | INFO     | [data] control thread has finished
[2026-02-09 18:19:51] 2026-02-09 23:02:15,299 | INFO     | all payload control threads have been joined
[2026-02-09 18:19:51] 2026-02-09 23:02:15,355 | INFO     | [data] copytool_in thread has finished
[2026-02-09 18:19:51] 2026-02-09 23:02:15,401 | INFO     | all job control threads have been joined
[2026-02-09 18:19:51] 2026-02-09 23:02:15,452 | INFO     | [payload] execute_payloads thread has finished
[2026-02-09 18:19:51] 2026-02-09 23:02:15,498 | INFO     | [job] job monitor thread has finished
[2026-02-09 18:19:51] 2026-02-09 23:02:15,605 | INFO     | [payload] validate_pre thread has finished
[2026-02-09 18:19:51] 2026-02-09 23:02:15,622 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-09 18:19:51] 2026-02-09 23:02:15,997 | INFO     | [data] copytool_out thread has finished
[2026-02-09 18:19:51] 2026-02-09 23:02:16,222 | INFO     | [payload] validate_post thread has finished
[2026-02-09 18:19:51] 2026-02-09 23:02:16,288 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-09 18:19:51] 2026-02-09 23:02:16,305 | INFO     | [payload] control thread has finished
[2026-02-09 18:19:51] 2026-02-09 23:02:16,356 | INFO     | [job] create_data_payload thread has finished
[2026-02-09 18:19:51] 2026-02-09 23:02:16,406 | INFO     | [job] control thread has finished
[2026-02-09 18:19:51] 2026-02-09 23:02:17,294 | INFO     | [job] queue monitor thread has finished
[2026-02-09 18:19:51] 2026-02-09 23:02:18,359 | INFO     | [data] queue_monitor thread has finished
[2026-02-09 18:19:51] 2026-02-09 23:02:25,226 | INFO     | [monitor] cgroup control has ended
[2026-02-09 18:19:51] 2026-02-09 23:02:26,141 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139661439711040)>', '<ExcThread(monitor, started 139660508518144)>']
[2026-02-09 18:19:51] 2026-02-09 23:02:31,167 | INFO     | all workflow threads have been joined
[2026-02-09 18:19:51] 2026-02-09 23:02:31,168 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-09 18:19:51] 2026-02-09 23:02:31,168 | INFO     | traces error code: 0
[2026-02-09 18:19:51] 2026-02-09 23:02:31,168 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-09 18:19:51] 2026-02-09 23:02:44,480 | INFO     | PID=105321 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-09 18:19:51] 2026-02-09 23:02:44,481 | INFO     | .. there are 37 such processes running
[2026-02-09 18:19:51] 2026-02-09 23:02:44,481 | INFO     | found 0 job(s) in 20 queues
[2026-02-09 18:19:51] 2026-02-09 23:02:44,481 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-09 18:19:51] 2026-02-09 23:02:44,481 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-09 18:19:51] 2026-02-09 23:02:44,481 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-09 18:19:51] 2026-02-09 23:02:44,481 | INFO     | [monitor] control thread has ended
[2026-02-09 18:19:51] 2026-02-09 23:02:44,588 [wrapper] ==== pilot stdout END ====
[2026-02-09 18:19:51] 2026-02-09 23:02:44,628 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-09 18:19:51] 2026-02-09 23:02:44,632 [wrapper] pilotpid: 105321
[2026-02-09 18:19:51] 2026-02-09 23:02:44,633 [wrapper] Pilot exit status: 0
[2026-02-09 18:19:51] 2026-02-09 23:02:44,669 [wrapper] pandaids: 7006309588
[2026-02-09 18:19:51] 2026-02-09 23:02:44,804 [wrapper] cleanup supervisor_pilot  367380 105322
[2026-02-09 18:19:51] 2026-02-09 23:02:44,822 [wrapper] Test setup, not cleaning
[2026-02-09 18:19:51] 2026-02-09 23:02:44,825 [wrapper] apfmon messages muted
[2026-02-09 18:19:51] 2026-02-09 23:02:44,840 [wrapper] ==== wrapper stdout END ====
[2026-02-09 18:19:51] 2026-02-09 23:02:44,846 [wrapper] ==== wrapper stderr END ====
[2026-02-09 18:19:51]  *** Error codes and diagnostics ***
[2026-02-09 18:19:51]     "exeErrorCode": 0,
[2026-02-09 18:19:51]     "exeErrorDiag": "",
[2026-02-09 18:19:51]     "pilotErrorCode": 0,
[2026-02-09 18:19:51]     "pilotErrorDiag": "",
[2026-02-09 18:19:51]  *** Listing of results directory ***
[2026-02-09 18:19:51] total 667232
[2026-02-09 18:19:51] -rwx------. 1 boincer umatlas     36322 Feb  9 08:22 runpilot2-wrapper.sh
[2026-02-09 18:19:51] -rw-r--r--. 1 boincer umatlas    584627 Feb  9 08:24 pilot3.tar.gz
[2026-02-09 18:19:51] -rw-r--r--. 1 boincer umatlas      5111 Feb  9 08:25 queuedata.json
[2026-02-09 18:19:51] -rw-r--r--. 1 boincer umatlas       100 Feb  9 17:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-09 18:19:51] -rwxr-xr-x. 1 boincer umatlas      7986 Feb  9 17:00 run_atlas
[2026-02-09 18:19:51] -rw-r--r--. 1 boincer umatlas       105 Feb  9 17:00 job.xml
[2026-02-09 18:19:51] -rw-r--r--. 2 boincer umatlas 496550841 Feb  9 17:00 EVNT.48318016._000118.pool.root.1
[2026-02-09 18:19:51] -rw-r--r--. 2 boincer umatlas     15845 Feb  9 17:00 start_atlas.sh
[2026-02-09 18:19:51] drwxrwx--x. 2 boincer umatlas      4096 Feb  9 17:00 shared
[2026-02-09 18:19:51] -rw-r--r--. 2 boincer umatlas    597945 Feb  9 17:00 input.tar.gz
[2026-02-09 18:19:51] -rw-r--r--. 1 boincer umatlas         0 Feb  9 17:00 boinc_lockfile
[2026-02-09 18:19:51] -rw-r--r--. 1 boincer umatlas      2522 Feb  9 17:00 pandaJob.out
[2026-02-09 18:19:51] -rw-------. 1 boincer umatlas        57 Feb  9 17:00 setup.sh.local
[2026-02-09 18:19:51] -rw-------. 1 boincer umatlas   1009488 Feb  9 17:00 agis_schedconf.cvmfs.json
[2026-02-09 18:19:51] -rw-------. 1 boincer umatlas   1513144 Feb  9 17:00 agis_ddmendpoints.agis.ALL.json
[2026-02-09 18:19:51] -rw-------. 1 boincer umatlas       430 Feb  9 17:01 workernode_map.json
[2026-02-09 18:19:51] drwx------. 5 boincer umatlas      4096 Feb  9 17:01 pilot3
[2026-02-09 18:19:51] -rw-------. 1 boincer umatlas 180977858 Feb  9 18:01 HITS.48318018._006022.pool.root.1
[2026-02-09 18:19:51] -rw-r--r--. 1 boincer umatlas       530 Feb  9 18:01 boinc_task_state.xml
[2026-02-09 18:19:51] -rw-------. 1 boincer umatlas        95 Feb  9 18:01 pilot_heartbeat.json
[2026-02-09 18:19:51] -rw-------. 1 boincer umatlas      1031 Feb  9 18:02 memory_monitor_summary.json
[2026-02-09 18:19:51] -rw-------. 1 boincer umatlas    356711 Feb  9 18:02 log.48318018._006022.job.log.tgz.1
[2026-02-09 18:19:51] -rw-------. 1 boincer umatlas      6325 Feb  9 18:02 heartbeat.json
[2026-02-09 18:19:51] -rw-------. 1 boincer umatlas       822 Feb  9 18:02 pilotlog.txt
[2026-02-09 18:19:51] -rw-------. 1 boincer umatlas    531217 Feb  9 18:02 log.48318018._006022.job.log.1
[2026-02-09 18:19:51] -rw-------. 1 boincer umatlas       357 Feb  9 18:02 output.list
[2026-02-09 18:19:51] -rw-r--r--. 1 boincer umatlas       620 Feb  9 18:02 runtime_log
[2026-02-09 18:19:51] -rw-------. 1 boincer umatlas    901120 Feb  9 18:02 result.tar.gz
[2026-02-09 18:19:51] -rw-------. 1 boincer umatlas       652 Feb  9 18:02 9P3NDm6Og98nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmF2fKDmlVLBOn.diag
[2026-02-09 18:19:51] -rw-r--r--. 1 boincer umatlas      9333 Feb  9 18:02 runtime_log.err
[2026-02-09 18:19:51] -rw-r--r--. 1 boincer umatlas      7171 Feb  9 18:19 init_data.xml
[2026-02-09 18:19:51] -rw-r--r--. 1 boincer umatlas      8192 Feb  9 18:19 boinc_mmap_file
[2026-02-09 18:19:51] -rw-r--r--. 1 boincer umatlas        27 Feb  9 18:19 wrapper_checkpoint.txt
[2026-02-09 18:19:51] -rw-r--r--. 1 boincer umatlas     22830 Feb  9 18:19 stderr.txt
[2026-02-09 18:19:51] HITS file was successfully produced:
[2026-02-09 18:19:51] -rw-------. 1 boincer umatlas 180977858 Feb  9 18:01 shared/HITS.pool.root.1
[2026-02-09 18:19:51]  *** Contents of shared directory: ***
[2026-02-09 18:19:51] total 663144
[2026-02-09 18:19:51] -rw-r--r--. 2 boincer umatlas 496550841 Feb  9 17:00 ATLAS.root_0
[2026-02-09 18:19:51] -rw-r--r--. 2 boincer umatlas     15845 Feb  9 17:00 start_atlas.sh
[2026-02-09 18:19:51] -rw-r--r--. 2 boincer umatlas    597945 Feb  9 17:00 input.tar.gz
[2026-02-09 18:19:51] -rw-------. 1 boincer umatlas 180977858 Feb  9 18:01 HITS.pool.root.1
[2026-02-09 18:19:51] -rw-------. 1 boincer umatlas    901120 Feb  9 18:02 result.tar.gz
18:19:53 (99570): run_atlas exited; CPU time 24144.938165
18:19:53 (99570): called boinc_finish(0)

</stderr_txt>
]]>

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