Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:21:47 (2520667): wrapper (7.7.26015): starting
18:21:47 (2520667): wrapper: running run_atlas (--nthreads 10)
[2026-02-09 18:21:47] Arguments: --nthreads 10
[2026-02-09 18:21:47] Threads: 10
[2026-02-09 18:21:47] Checking for CVMFS
[2026-02-09 18:21:48] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-09 18:21:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-09 18:21:48] Running cvmfs_config stat atlas.cern.ch
[2026-02-09 18:21:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-09 18:21:49] 2.13.3.0 1684472 62166 214664 156069 2 167 38117704 40960001 13717 16776704 0 78297023 99.705 62384869 41046 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-09 18:21:49] CVMFS is ok
[2026-02-09 18:21:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-09 18:21:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-09 18:21:49] Further information can be found at the LHC@home message board.
[2026-02-09 18:21:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-09 18:21:49] Checking for apptainer binary...
[2026-02-09 18:21:49] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-09 18:21:49] Running /usr/bin/apptainer --version
[2026-02-09 18:21:49] apptainer version 1.4.5-2.el9
[2026-02-09 18:21:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-09 18:22:09] c-206-36.aglt2.org
[2026-02-09 18:22:09] apptainer works
[2026-02-09 18:22:09] Set ATHENA_PROC_NUMBER=10
[2026-02-09 18:22:09] Set ATHENA_CORE_NUMBER=10
[2026-02-09 18:22:09] Starting ATLAS job with PandaID=7008995593
[2026-02-09 18:22:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-09 20:48:52]  *** The last 200 lines of the pilot log: ***
[2026-02-09 20:48:52] 2026-02-10 01:48:14,710 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7008995593/jobReport.json
[2026-02-09 20:48:52] 2026-02-10 01:48:14,756 | INFO     | monitor loop #613: job 0:7008995593 is in state 'finished'
[2026-02-09 20:48:52] 2026-02-10 01:48:14,757 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-09 20:48:52] 2026-02-10 01:48:14,758 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-02-09 20:48:52] 2026-02-10 01:48:14,759 | INFO     | this job has now completed (state=finished)
[2026-02-09 20:48:52] 2026-02-10 01:48:14,759 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-09 20:48:52] 2026-02-10 01:48:14,759 | INFO     | log transfer has been attempted: DONE
[2026-02-09 20:48:52] 2026-02-10 01:48:14,759 | INFO     | job 7008995593 has finished - writing final server update
[2026-02-09 20:48:52] 2026-02-10 01:48:14,759 | INFO     | total number of processed events: 400 (read)
[2026-02-09 20:48:52] 2026-02-10 01:48:14,867 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7008995593/memory_monitor_summary.json (trf name=prmon)
[2026-02-09 20:48:52] 2026-02-10 01:48:14,867 | INFO     | extracted standard info from prmon json
[2026-02-09 20:48:52] 2026-02-10 01:48:14,868 | INFO     | extracted standard memory fields from prmon json
[2026-02-09 20:48:52] 2026-02-10 01:48:14,868 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-09 20:48:52] 2026-02-10 01:48:14,868 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-09 20:48:52] 2026-02-10 01:48:14,868 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-09 20:48:52] 2026-02-10 01:48:14,894 | INFO     | fitting pss+swap vs Time
[2026-02-09 20:48:52] 2026-02-10 01:48:14,895 | INFO     | sum of square deviations: 906776981.9720255
[2026-02-09 20:48:52] 2026-02-10 01:48:14,895 | INFO     | sum of deviations: -12405208514.713284
[2026-02-09 20:48:52] 2026-02-10 01:48:14,895 | INFO     | mean x: 1770683711.1678321
[2026-02-09 20:48:52] 2026-02-10 01:48:14,895 | INFO     | mean y: 2723799.27972028
[2026-02-09 20:48:52] 2026-02-10 01:48:14,896 | INFO     | intersect: 24226652160.22367
[2026-02-09 20:48:52] 2026-02-10 01:48:14,896 | INFO     | chi2: 1.2801037955990904
[2026-02-09 20:48:52] 2026-02-10 01:48:14,896 | INFO     | sum of square deviations: 814959324.3260869
[2026-02-09 20:48:52] 2026-02-10 01:48:14,897 | INFO     | sum of deviations: -11913472887.67391
[2026-02-09 20:48:52] 2026-02-10 01:48:14,897 | INFO     | mean x: 1770683558.673913
[2026-02-09 20:48:52] 2026-02-10 01:48:14,897 | INFO     | mean y: 2724629.6739130435
[2026-02-09 20:48:52] 2026-02-10 01:48:14,897 | INFO     | intersect: 25887440515.77739
[2026-02-09 20:48:52] 2026-02-10 01:48:14,897 | INFO     | chi2: 1.2763200298748285
[2026-02-09 20:48:52] 2026-02-10 01:48:14,931 | INFO     | current chi2=1.2763200298748285 (change=0.29558272831236 %)
[2026-02-09 20:48:52] 2026-02-10 01:48:14,931 | INFO     | right removable region: 137
[2026-02-09 20:48:52] 2026-02-10 01:48:14,932 | INFO     | sum of square deviations: 814944684.3260869
[2026-02-09 20:48:52] 2026-02-10 01:48:14,932 | INFO     | sum of deviations: -30448450169.956524
[2026-02-09 20:48:52] 2026-02-10 01:48:14,932 | INFO     | mean x: 1770683863.673913
[2026-02-09 20:48:52] 2026-02-10 01:48:14,933 | INFO     | mean y: 2753210.9565217393
[2026-02-09 20:48:52] 2026-02-10 01:48:14,933 | INFO     | intersect: 66160101589.031456
[2026-02-09 20:48:52] 2026-02-10 01:48:14,933 | INFO     | chi2: 0.10412867592657016
[2026-02-09 20:48:52] 2026-02-10 01:48:14,933 | INFO     | current chi2=0.10412867592657016 (change=91.8656068137164 %)
[2026-02-09 20:48:52] 2026-02-10 01:48:14,933 | INFO     | sum of square deviations: 729531111.6691723
[2026-02-09 20:48:52] 2026-02-10 01:48:14,934 | INFO     | sum of deviations: -25978036205.97745
[2026-02-09 20:48:52] 2026-02-10 01:48:14,934 | INFO     | mean x: 1770684016.1804512
[2026-02-09 20:48:52] 2026-02-10 01:48:14,934 | INFO     | mean y: 2745202.6240601502
[2026-02-09 20:48:52] 2026-02-10 01:48:14,934 | INFO     | intersect: 63055427598.08151
[2026-02-09 20:48:52] 2026-02-10 01:48:14,934 | INFO     | chi2: 0.10059455143881905
[2026-02-09 20:48:52] 2026-02-10 01:48:14,934 | INFO     | current chi2=0.10059455143881905 (change=3.393997336759866 %)
[2026-02-09 20:48:52] 2026-02-10 01:48:14,934 | INFO     | left removable region: 20
[2026-02-09 20:48:52] 2026-02-10 01:48:14,934 | INFO     | sum of square deviations: 496643965.2307682
[2026-02-09 20:48:52] 2026-02-10 01:48:14,935 | INFO     | sum of deviations: -14623452787.871798
[2026-02-09 20:48:52] 2026-02-10 01:48:14,935 | INFO     | mean x: 1770684138.1794872
[2026-02-09 20:48:52] 2026-02-10 01:48:14,935 | INFO     | mean y: 2724958.8034188035
[2026-02-09 20:48:52] 2026-02-10 01:48:14,960 | INFO     | intersect: 52139703779.97894
[2026-02-09 20:48:52] 2026-02-10 01:48:14,961 | INFO     | chi2: 0.060978712797581755
[2026-02-09 20:48:52] 2026-02-10 01:48:14,961 | INFO     | current memory leak: -29.44 B/s (using 117 data points, chi2=0.06)
[2026-02-09 20:48:52] 2026-02-10 01:48:14,961 | INFO     | could have reported an average CPU frequency of 3265 MHz (8 samples)
[2026-02-09 20:48:52] 2026-02-10 01:48:14,961 | INFO     | ..............................
[2026-02-09 20:48:52] 2026-02-10 01:48:14,961 | INFO     | . Timing measurements:
[2026-02-09 20:48:52] 2026-02-10 01:48:14,961 | INFO     | . get job = 0 s
[2026-02-09 20:48:52] 2026-02-10 01:48:14,961 | INFO     | . initial setup = 8 s
[2026-02-09 20:48:52] 2026-02-10 01:48:14,962 | INFO     | . payload setup = 9 s
[2026-02-09 20:48:52] 2026-02-10 01:48:14,962 | INFO     | . stage-in = 0 s
[2026-02-09 20:48:52] 2026-02-10 01:48:14,962 | INFO     | . payload execution = 8714 s
[2026-02-09 20:48:52] 2026-02-10 01:48:14,962 | INFO     | . stage-out = 1 s
[2026-02-09 20:48:52] 2026-02-10 01:48:14,962 | INFO     | . log creation = 0 s
[2026-02-09 20:48:52] 2026-02-10 01:48:14,962 | INFO     | ..............................
[2026-02-09 20:48:52] 2026-02-10 01:48:15,346 | INFO     | 
[2026-02-09 20:48:52] 2026-02-10 01:48:15,347 | INFO     | job summary report
[2026-02-09 20:48:52] 2026-02-10 01:48:15,348 | INFO     | --------------------------------------------------
[2026-02-09 20:48:52] 2026-02-10 01:48:15,348 | INFO     | PanDA job id: 7008995593
[2026-02-09 20:48:52] 2026-02-10 01:48:15,348 | INFO     | task id: 48431096
[2026-02-09 20:48:52] 2026-02-10 01:48:15,348 | INFO     | errors: (none)
[2026-02-09 20:48:52] 2026-02-10 01:48:15,348 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-09 20:48:52] 2026-02-10 01:48:15,348 | INFO     | pilot state: finished 
[2026-02-09 20:48:52] 2026-02-10 01:48:15,348 | INFO     | transexitcode: 0
[2026-02-09 20:48:52] 2026-02-10 01:48:15,348 | INFO     | exeerrorcode: 0
[2026-02-09 20:48:52] 2026-02-10 01:48:15,348 | INFO     | exeerrordiag: 
[2026-02-09 20:48:52] 2026-02-10 01:48:15,348 | INFO     | exitcode: 0
[2026-02-09 20:48:52] 2026-02-10 01:48:15,348 | INFO     | exitmsg: OK
[2026-02-09 20:48:52] 2026-02-10 01:48:15,348 | INFO     | cpuconsumptiontime: 50592 s
[2026-02-09 20:48:52] 2026-02-10 01:48:15,348 | INFO     | nevents: 400
[2026-02-09 20:48:52] 2026-02-10 01:48:15,349 | INFO     | neventsw: 0
[2026-02-09 20:48:52] 2026-02-10 01:48:15,349 | INFO     | pid: 2532048
[2026-02-09 20:48:52] 2026-02-10 01:48:15,349 | INFO     | pgrp: 2532048
[2026-02-09 20:48:52] 2026-02-10 01:48:15,349 | INFO     | corecount: 10
[2026-02-09 20:48:52] 2026-02-10 01:48:15,349 | INFO     | event service: False
[2026-02-09 20:48:52] 2026-02-10 01:48:15,349 | INFO     | sizes: {0: 2283086, 11: 2283086, 8727: 2311376, 8729: 2320374, 8731: 2320430, 8732: 2320624}
[2026-02-09 20:48:52] 2026-02-10 01:48:15,349 | INFO     | --------------------------------------------------
[2026-02-09 20:48:52] 2026-02-10 01:48:15,349 | INFO     | 
[2026-02-09 20:48:52] 2026-02-10 01:48:15,349 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-09 20:48:52] 2026-02-10 01:48:15,374 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-09 20:48:52] 2026-02-10 01:48:15,375 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-09 20:48:52] 2026-02-10 01:48:15,375 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-09 20:48:52] 2026-02-10 01:48:15,375 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-09 20:48:52] 2026-02-10 01:48:15,375 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-09 20:48:52] 2026-02-10 01:48:15,375 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-09 20:48:52] 2026-02-10 01:48:15,375 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-09 20:48:52] 2026-02-10 01:48:15,375 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-09 20:48:52] 2026-02-10 01:48:15,375 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-09 20:48:52] 2026-02-10 01:48:15,375 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-09 20:48:52] 2026-02-10 01:48:15,375 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-09 20:48:52] 2026-02-10 01:48:15,375 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-09 20:48:52] 2026-02-10 01:48:15,375 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-09 20:48:52] 2026-02-10 01:48:15,376 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-09 20:48:52] 2026-02-10 01:48:15,376 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-09 20:48:52] 2026-02-10 01:48:15,376 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-09 20:48:52] 2026-02-10 01:48:15,376 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-09 20:48:52] 2026-02-10 01:48:15,376 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-09 20:48:52] 2026-02-10 01:48:15,376 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-09 20:48:52] 2026-02-10 01:48:15,376 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-09 20:48:52] 2026-02-10 01:48:15,376 | INFO     | job 7008995593 has completed (purged errors)
[2026-02-09 20:48:52] 2026-02-10 01:48:15,376 | INFO     | overall cleanup function is called
[2026-02-09 20:48:52] 2026-02-10 01:48:15,582 | INFO     | PID=2526061 has CPU usage=11.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-02-09 20:48:52] 2026-02-10 01:48:15,582 | INFO     | .. there are 12 such processes running
[2026-02-09 20:48:52] 2026-02-10 01:48:16,389 | INFO     | --- collectZombieJob: --- 10, [2532048]
[2026-02-09 20:48:52] 2026-02-10 01:48:16,394 | INFO     | zombie collector waiting for pid 2532048
[2026-02-09 20:48:52] 2026-02-10 01:48:16,394 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-09 20:48:52] 2026-02-10 01:48:16,396 | INFO     | collected zombie processes
[2026-02-09 20:48:52] 2026-02-10 01:48:16,399 | INFO     | will attempt to kill all subprocesses of pid=2532048
[2026-02-09 20:48:52] 2026-02-10 01:48:16,918 | INFO     | process IDs to be killed: [2532048] (in reverse order)
[2026-02-09 20:48:52] 2026-02-10 01:48:17,055 | WARNING  | found no corresponding commands to process id(s)
[2026-02-09 20:48:52] 2026-02-10 01:48:17,055 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-09 20:48:52] 2026-02-10 01:48:17,067 | INFO     | did not find any defunct processes belonging to 2532048
[2026-02-09 20:48:52] 2026-02-10 01:48:17,078 | INFO     | did not find any defunct processes belonging to 2532048
[2026-02-09 20:48:52] 2026-02-10 01:48:17,079 | INFO     | ready for new job
[2026-02-09 20:48:52] 2026-02-10 01:48:17,079 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-09 20:48:52] 2026-02-10 01:48:17,081 | INFO     | **************************************
[2026-02-09 20:48:52] 2026-02-10 01:48:17,081 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-09 20:48:52] 2026-02-10 01:48:17,081 | INFO     | **************************************
[2026-02-09 20:48:52] 2026-02-10 01:48:17,082 | INFO     | 
[2026-02-09 20:48:52] 2026-02-10 01:48:17,086 | INFO     | architecture information:
[2026-02-09 20:48:52] 2026-02-10 01:48:17,086 | INFO     | executing command: cat /etc/os-release
[2026-02-09 20:48:52] 2026-02-10 01:48:17,112 | INFO     | cat /etc/os-release:
[2026-02-09 20:48:52] NAME="CentOS Linux"
[2026-02-09 20:48:52] VERSION="7 (Core)"
[2026-02-09 20:48:52] ID="centos"
[2026-02-09 20:48:52] ID_LIKE="rhel fedora"
[2026-02-09 20:48:52] VERSION_ID="7"
[2026-02-09 20:48:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-09 20:48:52] ANSI_COLOR="0;31"
[2026-02-09 20:48:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-09 20:48:52] HOME_URL="https://www.centos.org/"
[2026-02-09 20:48:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-09 20:48:52] 
[2026-02-09 20:48:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-09 20:48:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-09 20:48:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-09 20:48:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-09 20:48:52] 
[2026-02-09 20:48:52] 2026-02-10 01:48:17,112 | INFO     | **************************************
[2026-02-09 20:48:52] 2026-02-10 01:48:17,615 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-09 20:48:52] 2026-02-10 01:48:17,643 | INFO     | sufficient remaining disk space (80444653568 B)
[2026-02-09 20:48:52] 2026-02-10 01:48:17,643 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-09 20:48:52] 2026-02-10 01:48:17,643 | INFO     | current server update state: UPDATING_FINAL
[2026-02-09 20:48:52] 2026-02-10 01:48:17,643 | INFO     | update_server=False
[2026-02-09 20:48:52] 2026-02-10 01:48:17,643 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-09 20:48:52] 2026-02-10 01:48:18,086 | INFO     | all data control threads have been joined
[2026-02-09 20:48:52] 2026-02-10 01:48:18,280 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-09 20:48:52] 2026-02-10 01:48:18,282 | INFO     | aborting loop
[2026-02-09 20:48:52] 2026-02-10 01:48:18,307 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-09 20:48:52] 2026-02-10 01:48:18,505 | INFO     | all job control threads have been joined
[2026-02-09 20:48:52] 2026-02-10 01:48:18,649 | INFO     | [job] retrieve thread has finished
[2026-02-09 20:48:52] 2026-02-10 01:48:18,809 | INFO     | [job] create_data_payload thread has finished
[2026-02-09 20:48:52] 2026-02-10 01:48:18,938 | INFO     | all payload control threads have been joined
[2026-02-09 20:48:52] 2026-02-10 01:48:19,092 | INFO     | [data] control thread has finished
[2026-02-09 20:48:52] 2026-02-10 01:48:19,134 | INFO     | [job] validate thread has finished
[2026-02-09 20:48:52] 2026-02-10 01:48:19,288 | INFO     | [job] job monitor thread has finished
[2026-02-09 20:48:52] 2026-02-10 01:48:19,477 | INFO     | [payload] validate_pre thread has finished
[2026-02-09 20:48:52] 2026-02-10 01:48:19,510 | INFO     | [job] control thread has finished
[2026-02-09 20:48:52] 2026-02-10 01:48:19,604 | INFO     | [payload] execute_payloads thread has finished
[2026-02-09 20:48:52] 2026-02-10 01:48:19,660 | INFO     | [data] copytool_in thread has finished
[2026-02-09 20:48:52] 2026-02-10 01:48:19,682 | INFO     | [payload] failed_post thread has finished
[2026-02-09 20:48:52] 2026-02-10 01:48:19,783 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-09 20:48:52] 2026-02-10 01:48:19,958 | INFO     | [payload] control thread has finished
[2026-02-09 20:48:52] 2026-02-10 01:48:20,135 | INFO     | [payload] validate_post thread has finished
[2026-02-09 20:48:52] 2026-02-10 01:48:20,314 | INFO     | [data] copytool_out thread has finished
[2026-02-09 20:48:52] 2026-02-10 01:48:20,360 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-09 20:48:52] 2026-02-10 01:48:20,721 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-09 20:48:52] 2026-02-10 01:48:21,366 | INFO     | [job] queue monitor thread has finished
[2026-02-09 20:48:52] 2026-02-10 01:48:24,734 | INFO     | [data] queue_monitor thread has finished
[2026-02-09 20:48:52] 2026-02-10 01:48:46,590 | INFO     | [monitor] cgroup control has ended
[2026-02-09 20:48:52] 2026-02-10 01:48:47,089 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140701405321024)>', '<ExcThread(monitor, started 140700846913280)>']
[2026-02-09 20:48:52] 2026-02-10 01:48:48,324 | INFO     | PID=2526061 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-09 20:48:52] 2026-02-10 01:48:48,324 | INFO     | .. there are 12 such processes running
[2026-02-09 20:48:52] 2026-02-10 01:48:48,325 | INFO     | found 0 job(s) in 20 queues
[2026-02-09 20:48:52] 2026-02-10 01:48:48,325 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-09 20:48:52] 2026-02-10 01:48:48,325 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-09 20:48:52] 2026-02-10 01:48:48,325 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-09 20:48:52] 2026-02-10 01:48:48,326 | INFO     | [monitor] control thread has ended
[2026-02-09 20:48:52] 2026-02-10 01:48:52,115 | INFO     | all workflow threads have been joined
[2026-02-09 20:48:52] 2026-02-10 01:48:52,116 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-09 20:48:52] 2026-02-10 01:48:52,116 | INFO     | traces error code: 0
[2026-02-09 20:48:52] 2026-02-10 01:48:52,116 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-09 20:48:52] 2026-02-10 01:48:52,318 [wrapper] ==== pilot stdout END ====
[2026-02-09 20:48:52] 2026-02-10 01:48:52,322 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-09 20:48:52] 2026-02-10 01:48:52,330 [wrapper] pilotpid: 2526061
[2026-02-09 20:48:52] 2026-02-10 01:48:52,332 [wrapper] Pilot exit status: 0
[2026-02-09 20:48:52] 2026-02-10 01:48:52,370 [wrapper] pandaids: 7008995593
[2026-02-09 20:48:52] 2026-02-10 01:48:52,562 [wrapper] cleanup supervisor_pilot 2859776 2526062
[2026-02-09 20:48:52] 2026-02-10 01:48:52,570 [wrapper] Test setup, not cleaning
[2026-02-09 20:48:52] 2026-02-10 01:48:52,573 [wrapper] apfmon messages muted
[2026-02-09 20:48:52] 2026-02-10 01:48:52,576 [wrapper] ==== wrapper stdout END ====
[2026-02-09 20:48:52] 2026-02-10 01:48:52,579 [wrapper] ==== wrapper stderr END ====
[2026-02-09 20:48:52]  *** Error codes and diagnostics ***
[2026-02-09 20:48:52]     "exeErrorCode": 0,
[2026-02-09 20:48:52]     "exeErrorDiag": "",
[2026-02-09 20:48:52]     "pilotErrorCode": 0,
[2026-02-09 20:48:52]     "pilotErrorDiag": "",
[2026-02-09 20:48:52]  *** Listing of results directory ***
[2026-02-09 20:48:52] total 945520
[2026-02-09 20:48:52] -rw-r--r--. 1 boincer umatlas    584627 Feb  9 08:19 pilot3.tar.gz
[2026-02-09 20:48:52] -rwx------. 1 boincer umatlas     36322 Feb  9 08:20 runpilot2-wrapper.sh
[2026-02-09 20:48:52] -rw-r--r--. 1 boincer umatlas      5111 Feb  9 08:21 queuedata.json
[2026-02-09 20:48:52] -rw-r--r--. 1 boincer umatlas       100 Feb  9 18:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-09 20:48:52] -rwxr-xr-x. 1 boincer umatlas      7986 Feb  9 18:21 run_atlas
[2026-02-09 20:48:52] -rw-r--r--. 1 boincer umatlas       105 Feb  9 18:21 job.xml
[2026-02-09 20:48:52] -rw-r--r--. 2 boincer umatlas 676326976 Feb  9 18:21 EVNT.48431094._000375.pool.root.1
[2026-02-09 20:48:52] -rw-r--r--. 2 boincer umatlas     15845 Feb  9 18:21 start_atlas.sh
[2026-02-09 20:48:52] drwxrwx--x. 2 boincer umatlas      4096 Feb  9 18:21 shared
[2026-02-09 20:48:52] -rw-r--r--. 2 boincer umatlas    597968 Feb  9 18:21 input.tar.gz
[2026-02-09 20:48:52] -rw-r--r--. 1 boincer umatlas         0 Feb  9 18:21 boinc_lockfile
[2026-02-09 20:48:52] -rw-r--r--. 1 boincer umatlas      2556 Feb  9 18:22 pandaJob.out
[2026-02-09 20:48:52] -rw-------. 1 boincer umatlas        57 Feb  9 18:22 setup.sh.local
[2026-02-09 20:48:52] -rw-------. 1 boincer umatlas   1009496 Feb  9 18:22 agis_schedconf.cvmfs.json
[2026-02-09 20:48:52] -rw-------. 1 boincer umatlas   1513144 Feb  9 18:22 agis_ddmendpoints.agis.ALL.json
[2026-02-09 20:48:52] -rw-------. 1 boincer umatlas       430 Feb  9 18:22 workernode_map.json
[2026-02-09 20:48:52] drwx------. 5 boincer umatlas      4096 Feb  9 18:22 pilot3
[2026-02-09 20:48:52] -rw-r--r--. 1 boincer umatlas      6907 Feb  9 20:46 init_data.xml
[2026-02-09 20:48:52] -rw-------. 1 boincer umatlas 284599654 Feb  9 20:47 HITS.48431096._017482.pool.root.1
[2026-02-09 20:48:52] -rw-r--r--. 1 boincer umatlas       530 Feb  9 20:47 boinc_task_state.xml
[2026-02-09 20:48:52] -rw-------. 1 boincer umatlas      1030 Feb  9 20:48 memory_monitor_summary.json
[2026-02-09 20:48:52] -rw-------. 1 boincer umatlas    454459 Feb  9 20:48 log.48431096._017482.job.log.tgz.1
[2026-02-09 20:48:52] -rw-------. 1 boincer umatlas      6334 Feb  9 20:48 heartbeat.json
[2026-02-09 20:48:52] -rw-r--r--. 1 boincer umatlas      8192 Feb  9 20:48 boinc_mmap_file
[2026-02-09 20:48:52] -rw-r--r--. 1 boincer umatlas        27 Feb  9 20:48 wrapper_checkpoint.txt
[2026-02-09 20:48:52] -rw-------. 1 boincer umatlas        95 Feb  9 20:48 pilot_heartbeat.json
[2026-02-09 20:48:52] -rw-------. 1 boincer umatlas      4820 Feb  9 20:48 pilotlog.txt
[2026-02-09 20:48:52] -rw-------. 1 boincer umatlas   1214221 Feb  9 20:48 log.48431096._017482.job.log.1
[2026-02-09 20:48:52] -rw-------. 1 boincer umatlas       357 Feb  9 20:48 output.list
[2026-02-09 20:48:52] -rw-r--r--. 1 boincer umatlas       620 Feb  9 20:48 runtime_log
[2026-02-09 20:48:52] -rw-------. 1 boincer umatlas   1689600 Feb  9 20:48 result.tar.gz
[2026-02-09 20:48:52] -rw-------. 1 boincer umatlas       652 Feb  9 20:48 t4gMDmtMg98nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmIufKDmnfeI6m.diag
[2026-02-09 20:48:52] -rw-r--r--. 1 boincer umatlas      9343 Feb  9 20:48 runtime_log.err
[2026-02-09 20:48:52] -rw-r--r--. 1 boincer umatlas     21436 Feb  9 20:48 stderr.txt
[2026-02-09 20:48:52] HITS file was successfully produced:
[2026-02-09 20:48:52] -rw-------. 1 boincer umatlas 284599654 Feb  9 20:47 shared/HITS.pool.root.1
[2026-02-09 20:48:52]  *** Contents of shared directory: ***
[2026-02-09 20:48:52] total 940668
[2026-02-09 20:48:52] -rw-r--r--. 2 boincer umatlas 676326976 Feb  9 18:21 ATLAS.root_0
[2026-02-09 20:48:52] -rw-r--r--. 2 boincer umatlas     15845 Feb  9 18:21 start_atlas.sh
[2026-02-09 20:48:52] -rw-r--r--. 2 boincer umatlas    597968 Feb  9 18:21 input.tar.gz
[2026-02-09 20:48:52] -rw-------. 1 boincer umatlas 284599654 Feb  9 20:47 HITS.pool.root.1
[2026-02-09 20:48:52] -rw-------. 1 boincer umatlas   1689600 Feb  9 20:48 result.tar.gz
20:48:54 (2520667): run_atlas exited; CPU time 50619.297687
20:48:54 (2520667): called boinc_finish(0)

</stderr_txt>
]]>

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