Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
10:30:09 (679560): wrapper (7.7.26015): starting
10:30:09 (679560): wrapper: running run_atlas (--nthreads 3)
[2026-02-10 10:30:09] Arguments: --nthreads 3
[2026-02-10 10:30:09] Threads: 3
[2026-02-10 10:30:09] Checking for CVMFS
[2026-02-10 10:30:09] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-10 10:30:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-10 10:30:09] Running cvmfs_config stat atlas.cern.ch
[2026-02-10 10:30:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-10 10:30:09] 2.9.2.0 4008882 5911 83464 156083 2 49 36560533 36864000 0 130560 0 2450549 99.984 211490 5192 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-10 10:30:09] CVMFS is ok
[2026-02-10 10:30:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-10 10:30:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-10 10:30:09] Further information can be found at the LHC@home message board.
[2026-02-10 10:30:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-10 10:30:09] Checking for apptainer binary...
[2026-02-10 10:30:09] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-10 10:30:09] Running /usr/bin/apptainer --version
[2026-02-10 10:30:09] apptainer version 1.4.1-1.1
[2026-02-10 10:30:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-10 10:30:10] belleA263b
[2026-02-10 10:30:10] apptainer works
[2026-02-10 10:30:10] Set ATHENA_PROC_NUMBER=3
[2026-02-10 10:30:10] Set ATHENA_CORE_NUMBER=3
[2026-02-10 10:30:10] Starting ATLAS job with PandaID=7005389383
[2026-02-10 10:30:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-10 12:25:35]  *** The last 200 lines of the pilot log: ***
[2026-02-10 12:25:35] 2026-02-10 11:24:32,100 | INFO     | extracted standard memory fields from prmon json
[2026-02-10 12:25:35] 2026-02-10 11:24:32,100 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-10 12:25:35] 2026-02-10 11:24:32,100 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-10 12:25:35] 2026-02-10 11:24:32,100 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-10 12:25:35] 2026-02-10 11:24:32,101 | INFO     | fitting pss+swap vs Time
[2026-02-10 12:25:35] 2026-02-10 11:24:32,101 | INFO     | sum of square deviations: 435610028.0
[2026-02-10 12:25:35] 2026-02-10 11:24:32,101 | INFO     | sum of deviations: -7964904779.499997
[2026-02-10 12:25:35] 2026-02-10 11:24:32,101 | INFO     | mean x: 1770719223.5
[2026-02-10 12:25:35] 2026-02-10 11:24:32,101 | INFO     | mean y: 2459974.4196428573
[2026-02-10 12:25:35] 2026-02-10 11:24:32,101 | INFO     | intersect: 32379148066.659046
[2026-02-10 12:25:35] 2026-02-10 11:24:32,101 | INFO     | chi2: 1.6326484896974212
[2026-02-10 12:25:35] 2026-02-10 11:24:32,101 | INFO     | sum of square deviations: 379832238.0
[2026-02-10 12:25:35] 2026-02-10 11:24:32,101 | INFO     | sum of deviations: -7188156857.0
[2026-02-10 12:25:35] 2026-02-10 11:24:32,101 | INFO     | mean x: 1770719071.0
[2026-02-10 12:25:35] 2026-02-10 11:24:32,101 | INFO     | mean y: 2462099.6542056073
[2026-02-10 12:25:35] 2026-02-10 11:24:32,101 | INFO     | intersect: 33512536176.17143
[2026-02-10 12:25:35] 2026-02-10 11:24:32,101 | INFO     | chi2: 1.6307619865015797
[2026-02-10 12:25:35] 2026-02-10 11:24:32,102 | INFO     | current chi2=1.6307619865015797 (change=0.11554864428846648 %)
[2026-02-10 12:25:35] 2026-02-10 11:24:32,102 | INFO     | right removable region: 106
[2026-02-10 12:25:35] 2026-02-10 11:24:32,102 | INFO     | sum of square deviations: 379832238.0
[2026-02-10 12:25:35] 2026-02-10 11:24:32,102 | INFO     | sum of deviations: -23516341067.999973
[2026-02-10 12:25:35] 2026-02-10 11:24:32,102 | INFO     | mean x: 1770719376.0
[2026-02-10 12:25:35] 2026-02-10 11:24:32,102 | INFO     | mean y: 2501486.644859813
[2026-02-10 12:25:35] 2026-02-10 11:24:32,102 | INFO     | intersect: 109632060580.92082
[2026-02-10 12:25:35] 2026-02-10 11:24:32,102 | INFO     | chi2: 0.1092215596559996
[2026-02-10 12:25:35] 2026-02-10 11:24:32,102 | INFO     | current chi2=0.1092215596559996 (change=93.3101607391165 %)
[2026-02-10 12:25:35] 2026-02-10 11:24:32,102 | INFO     | sum of square deviations: 329031285.5
[2026-02-10 12:25:35] 2026-02-10 11:24:32,102 | INFO     | sum of deviations: -19678242234.999992
[2026-02-10 12:25:35] 2026-02-10 11:24:32,102 | INFO     | mean x: 1770719528.5
[2026-02-10 12:25:35] 2026-02-10 11:24:32,102 | INFO     | mean y: 2489942.5490196077
[2026-02-10 12:25:35] 2026-02-10 11:24:32,102 | INFO     | intersect: 105903203180.555
[2026-02-10 12:25:35] 2026-02-10 11:24:32,102 | INFO     | chi2: 0.10705408537494815
[2026-02-10 12:25:35] 2026-02-10 11:24:32,102 | INFO     | current chi2=0.10705408537494815 (change=1.9844747574362147 %)
[2026-02-10 12:25:35] 2026-02-10 11:24:32,102 | INFO     | left removable region: 20
[2026-02-10 12:25:35] 2026-02-10 11:24:32,103 | INFO     | sum of square deviations: 197203697.5
[2026-02-10 12:25:35] 2026-02-10 11:24:32,103 | INFO     | sum of deviations: -10254020486.499996
[2026-02-10 12:25:35] 2026-02-10 11:24:32,103 | INFO     | mean x: 1770719650.5
[2026-02-10 12:25:35] 2026-02-10 11:24:32,103 | INFO     | mean y: 2462791.9418604653
[2026-02-10 12:25:35] 2026-02-10 11:24:32,103 | INFO     | intersect: 92074750493.72348
[2026-02-10 12:25:35] 2026-02-10 11:24:32,103 | INFO     | chi2: 0.07137642221344691
[2026-02-10 12:25:35] 2026-02-10 11:24:32,103 | INFO     | current memory leak: -52.00 B/s (using 86 data points, chi2=0.07)
[2026-02-10 12:25:35] 2026-02-10 11:24:32,103 | INFO     | could have reported an average CPU frequency of 4067 MHz (7 samples)
[2026-02-10 12:25:35] 2026-02-10 11:24:32,103 | INFO     | ..............................
[2026-02-10 12:25:35] 2026-02-10 11:24:32,103 | INFO     | . Timing measurements:
[2026-02-10 12:25:35] 2026-02-10 11:24:32,103 | INFO     | . get job = 0 s
[2026-02-10 12:25:35] 2026-02-10 11:24:32,103 | INFO     | . initial setup = 3 s
[2026-02-10 12:25:35] 2026-02-10 11:24:32,103 | INFO     | . payload setup = 3 s
[2026-02-10 12:25:35] 2026-02-10 11:24:32,103 | INFO     | . stage-in = 0 s
[2026-02-10 12:25:35] 2026-02-10 11:24:32,103 | INFO     | . payload execution = 6833 s
[2026-02-10 12:25:35] 2026-02-10 11:24:32,103 | INFO     | . stage-out = 0 s
[2026-02-10 12:25:35] 2026-02-10 11:24:32,103 | INFO     | . log creation = 0 s
[2026-02-10 12:25:35] 2026-02-10 11:24:32,103 | INFO     | ..............................
[2026-02-10 12:25:35] 2026-02-10 11:24:32,130 | INFO     | 
[2026-02-10 12:25:35] 2026-02-10 11:24:32,130 | INFO     | job summary report
[2026-02-10 12:25:35] 2026-02-10 11:24:32,130 | INFO     | --------------------------------------------------
[2026-02-10 12:25:35] 2026-02-10 11:24:32,130 | INFO     | PanDA job id: 7005389383
[2026-02-10 12:25:35] 2026-02-10 11:24:32,130 | INFO     | task id: 48431080
[2026-02-10 12:25:35] 2026-02-10 11:24:32,130 | INFO     | errors: (none)
[2026-02-10 12:25:35] 2026-02-10 11:24:32,130 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-10 12:25:35] 2026-02-10 11:24:32,130 | INFO     | pilot state: finished 
[2026-02-10 12:25:35] 2026-02-10 11:24:32,130 | INFO     | transexitcode: 0
[2026-02-10 12:25:35] 2026-02-10 11:24:32,130 | INFO     | exeerrorcode: 0
[2026-02-10 12:25:35] 2026-02-10 11:24:32,130 | INFO     | exeerrordiag: 
[2026-02-10 12:25:35] 2026-02-10 11:24:32,130 | INFO     | exitcode: 0
[2026-02-10 12:25:35] 2026-02-10 11:24:32,130 | INFO     | exitmsg: OK
[2026-02-10 12:25:35] 2026-02-10 11:24:32,130 | INFO     | cpuconsumptiontime: 19805 s
[2026-02-10 12:25:35] 2026-02-10 11:24:32,130 | INFO     | nevents: 400
[2026-02-10 12:25:35] 2026-02-10 11:24:32,130 | INFO     | neventsw: 0
[2026-02-10 12:25:35] 2026-02-10 11:24:32,130 | INFO     | pid: 688037
[2026-02-10 12:25:35] 2026-02-10 11:24:32,130 | INFO     | pgrp: 688037
[2026-02-10 12:25:35] 2026-02-10 11:24:32,130 | INFO     | corecount: 3
[2026-02-10 12:25:35] 2026-02-10 11:24:32,130 | INFO     | event service: False
[2026-02-10 12:25:35] 2026-02-10 11:24:32,130 | INFO     | sizes: {0: 2282269, 10: 2282269, 6840: 2309623, 6841: 2318821}
[2026-02-10 12:25:35] 2026-02-10 11:24:32,131 | INFO     | --------------------------------------------------
[2026-02-10 12:25:35] 2026-02-10 11:24:32,131 | INFO     | 
[2026-02-10 12:25:35] 2026-02-10 11:24:32,131 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-02-10 12:25:35] 2026-02-10 11:24:32,143 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-10 12:25:35] 2026-02-10 11:24:32,143 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-10 12:25:35] 2026-02-10 11:24:32,143 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-10 12:25:35] 2026-02-10 11:24:32,143 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-10 12:25:35] 2026-02-10 11:24:32,143 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-10 12:25:35] 2026-02-10 11:24:32,143 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-10 12:25:35] 2026-02-10 11:24:32,143 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-10 12:25:35] 2026-02-10 11:24:32,143 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-10 12:25:35] 2026-02-10 11:24:32,143 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-10 12:25:35] 2026-02-10 11:24:32,143 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-10 12:25:35] 2026-02-10 11:24:32,143 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-10 12:25:35] 2026-02-10 11:24:32,143 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-10 12:25:35] 2026-02-10 11:24:32,143 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-10 12:25:35] 2026-02-10 11:24:32,144 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-10 12:25:35] 2026-02-10 11:24:32,144 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-10 12:25:35] 2026-02-10 11:24:32,144 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-10 12:25:35] 2026-02-10 11:24:32,144 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-10 12:25:35] 2026-02-10 11:24:32,144 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-10 12:25:35] 2026-02-10 11:24:32,144 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-10 12:25:35] 2026-02-10 11:24:32,144 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-10 12:25:35] 2026-02-10 11:24:32,144 | INFO     | job 7005389383 has completed (purged errors)
[2026-02-10 12:25:35] 2026-02-10 11:24:32,144 | INFO     | overall cleanup function is called
[2026-02-10 12:25:35] 2026-02-10 11:24:32,744 | WARNING  | process 688037 can no longer be monitored (due to stat problems) - aborting
[2026-02-10 12:25:35] 2026-02-10 11:24:32,776 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-10 12:25:35] 2026-02-10 11:24:32,776 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-10 12:25:35] 2026-02-10 11:24:32,777 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-02-10 12:25:35] 2026-02-10 11:24:32,777 | WARNING  | maxPSS not found in memory monitor output
[2026-02-10 12:25:35] 2026-02-10 11:24:32,777 | INFO     | skipping file size check of payload stdout file (/local/data/boinc/slots/0/PanDA_Pilot-7005389383/payload.stdout) since it has not been created yet
[2026-02-10 12:25:35] 2026-02-10 11:24:32,777 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-10 12:25:35] 2026-02-10 11:24:32,787 | INFO     | sufficient remaining disk space (363696488448 B)
[2026-02-10 12:25:35] 2026-02-10 11:24:32,787 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-02-10 12:25:35] 2026-02-10 11:24:32,787 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-7005389383/HITS.48431080._014283.pool.root.1 since it does not exist
[2026-02-10 12:25:35] 2026-02-10 11:24:32,830 | INFO     | number of running child processes to parent process 688037: 1
[2026-02-10 12:25:35] 2026-02-10 11:24:32,830 | INFO     | maximum number of monitored processes: 6
[2026-02-10 12:25:35] 2026-02-10 11:24:32,830 | INFO     | aborting job monitoring since job object (job id=7005389383) has expired
[2026-02-10 12:25:35] 2026-02-10 11:24:33,146 | INFO     | --- collectZombieJob: --- 10, [688037]
[2026-02-10 12:25:35] 2026-02-10 11:24:33,147 | INFO     | zombie collector waiting for pid 688037
[2026-02-10 12:25:35] 2026-02-10 11:24:33,147 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-10 12:25:35] 2026-02-10 11:24:33,147 | INFO     | collected zombie processes
[2026-02-10 12:25:35] 2026-02-10 11:24:33,147 | INFO     | will attempt to kill all subprocesses of pid=688037
[2026-02-10 12:25:35] 2026-02-10 11:24:33,191 | INFO     | process IDs to be killed: [688037] (in reverse order)
[2026-02-10 12:25:35] 2026-02-10 11:24:33,219 | WARNING  | found no corresponding commands to process id(s)
[2026-02-10 12:25:35] 2026-02-10 11:24:33,219 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-10 12:25:35] 2026-02-10 11:24:33,220 | INFO     | did not find any defunct processes belonging to 688037
[2026-02-10 12:25:35] 2026-02-10 11:24:33,222 | INFO     | did not find any defunct processes belonging to 688037
[2026-02-10 12:25:35] 2026-02-10 11:24:33,222 | INFO     | ready for new job
[2026-02-10 12:25:35] 2026-02-10 11:24:33,222 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-10 12:25:35] 2026-02-10 11:24:33,222 | INFO     | **************************************
[2026-02-10 12:25:35] 2026-02-10 11:24:33,223 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-10 12:25:35] 2026-02-10 11:24:33,223 | INFO     | **************************************
[2026-02-10 12:25:35] 2026-02-10 11:24:33,223 | INFO     | 
[2026-02-10 12:25:35] 2026-02-10 11:24:33,223 | INFO     | architecture information:
[2026-02-10 12:25:35] 2026-02-10 11:24:33,223 | INFO     | executing command: cat /etc/os-release
[2026-02-10 12:25:35] 2026-02-10 11:24:33,232 | INFO     | cat /etc/os-release:
[2026-02-10 12:25:35] NAME="CentOS Linux"
[2026-02-10 12:25:35] VERSION="7 (Core)"
[2026-02-10 12:25:35] ID="centos"
[2026-02-10 12:25:35] ID_LIKE="rhel fedora"
[2026-02-10 12:25:35] VERSION_ID="7"
[2026-02-10 12:25:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-10 12:25:35] ANSI_COLOR="0;31"
[2026-02-10 12:25:35] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-10 12:25:35] HOME_URL="https://www.centos.org/"
[2026-02-10 12:25:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-10 12:25:35] 
[2026-02-10 12:25:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-10 12:25:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-10 12:25:35] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-10 12:25:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-10 12:25:35] 
[2026-02-10 12:25:35] 2026-02-10 11:24:33,232 | INFO     | **************************************
[2026-02-10 12:25:35] 2026-02-10 11:24:33,735 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-10 12:25:35] 2026-02-10 11:24:33,748 | INFO     | sufficient remaining disk space (363697537024 B)
[2026-02-10 12:25:35] 2026-02-10 11:24:33,749 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-10 12:25:35] 2026-02-10 11:24:33,749 | INFO     | current server update state: UPDATING_FINAL
[2026-02-10 12:25:35] 2026-02-10 11:24:33,749 | INFO     | update_server=False
[2026-02-10 12:25:35] 2026-02-10 11:24:33,749 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-10 12:25:35] 2026-02-10 11:24:33,749 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-10 12:25:35] 2026-02-10 11:24:33,749 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-10 12:25:35] 2026-02-10 11:24:33,749 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-10 12:25:35] 2026-02-10 11:24:33,749 | INFO     | will abort loop
[2026-02-10 12:25:35] 2026-02-10 11:24:34,544 | INFO     | all payload control threads have been joined
[2026-02-10 12:25:35] 2026-02-10 11:24:34,552 | INFO     | all data control threads have been joined
[2026-02-10 12:25:35] 2026-02-10 11:24:34,754 | INFO     | [job] retrieve thread has finished
[2026-02-10 12:25:35] 2026-02-10 11:24:34,755 | INFO     | [job] queue monitor thread has finished
[2026-02-10 12:25:35] 2026-02-10 11:24:34,755 | INFO     | [job] job monitor thread has finished
[2026-02-10 12:25:35] 2026-02-10 11:24:34,842 | INFO     | job.realtimelogging is not enabled
[2026-02-10 12:25:35] 2026-02-10 11:24:35,077 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-10 12:25:35] 2026-02-10 11:24:35,272 | INFO     | all job control threads have been joined
[2026-02-10 12:25:35] 2026-02-10 11:24:35,288 | INFO     | [job] create_data_payload thread has finished
[2026-02-10 12:25:35] 2026-02-10 11:24:35,313 | INFO     | [job] validate thread has finished
[2026-02-10 12:25:35] 2026-02-10 11:24:35,316 | INFO     | [payload] validate_pre thread has finished
[2026-02-10 12:25:35] 2026-02-10 11:24:35,538 | INFO     | [data] copytool_in thread has finished
[2026-02-10 12:25:35] 2026-02-10 11:24:35,550 | INFO     | [payload] control thread has finished
[2026-02-10 12:25:35] 2026-02-10 11:24:35,558 | INFO     | [data] control thread has finished
[2026-02-10 12:25:35] 2026-02-10 11:24:35,561 | INFO     | [payload] execute_payloads thread has finished
[2026-02-10 12:25:35] 2026-02-10 11:24:35,789 | INFO     | [payload] validate_post thread has finished
[2026-02-10 12:25:35] 2026-02-10 11:24:35,848 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-10 12:25:35] 2026-02-10 11:24:36,278 | INFO     | [job] control thread has finished
[2026-02-10 12:25:35] 2026-02-10 11:24:36,280 | INFO     | [payload] failed_post thread has finished
[2026-02-10 12:25:35] 2026-02-10 11:24:37,083 | INFO     | [data] copytool_out thread has finished
[2026-02-10 12:25:35] 2026-02-10 11:24:37,756 | INFO     | [data] queue_monitor thread has finished
[2026-02-10 12:25:35] 2026-02-10 11:25:04,288 | INFO     | PID=683604 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-10 12:25:35] 2026-02-10 11:25:04,288 | INFO     | found 0 job(s) in 20 queues
[2026-02-10 12:25:35] 2026-02-10 11:25:04,289 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-10 12:25:35] 2026-02-10 11:25:04,289 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-10 12:25:35] 2026-02-10 11:25:28,511 | INFO     | [monitor] cgroup control has ended
[2026-02-10 12:25:35] 2026-02-10 11:25:30,258 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140657181976384)>', '<ExcThread(monitor, started 140656395667200)>']
[2026-02-10 12:25:35] 2026-02-10 11:25:30,423 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-10 12:25:35] 2026-02-10 11:25:30,423 | INFO     | [monitor] control thread has ended
[2026-02-10 12:25:35] 2026-02-10 11:25:35,269 | INFO     | all workflow threads have been joined
[2026-02-10 12:25:35] 2026-02-10 11:25:35,270 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-10 12:25:35] 2026-02-10 11:25:35,270 | INFO     | traces error code: 0
[2026-02-10 12:25:35] 2026-02-10 11:25:35,270 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-10 12:25:35] 2026-02-10 11:25:35,321 [wrapper] ==== pilot stdout END ====
[2026-02-10 12:25:35] 2026-02-10 11:25:35,324 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-10 12:25:35] 2026-02-10 11:25:35,326 [wrapper] pilotpid: 683604
[2026-02-10 12:25:35] 2026-02-10 11:25:35,329 [wrapper] Pilot exit status: 0
[2026-02-10 12:25:35] 2026-02-10 11:25:35,336 [wrapper] pandaids: 7005389383
[2026-02-10 12:25:35] 2026-02-10 11:25:35,355 [wrapper] cleanup supervisor_pilot  693691 683605
[2026-02-10 12:25:35] 2026-02-10 11:25:35,358 [wrapper] Test setup, not cleaning
[2026-02-10 12:25:35] 2026-02-10 11:25:35,360 [wrapper] apfmon messages muted
[2026-02-10 12:25:35] 2026-02-10 11:25:35,363 [wrapper] ==== wrapper stdout END ====
[2026-02-10 12:25:35] 2026-02-10 11:25:35,365 [wrapper] ==== wrapper stderr END ====
[2026-02-10 12:25:35]  *** Error codes and diagnostics ***
[2026-02-10 12:25:35]     "exeErrorCode": 0,
[2026-02-10 12:25:35]     "exeErrorDiag": "",
[2026-02-10 12:25:35]     "pilotErrorCode": 0,
[2026-02-10 12:25:35]     "pilotErrorDiag": "",
[2026-02-10 12:25:35]  *** Listing of results directory ***
[2026-02-10 12:25:35] total 903136
[2026-02-10 12:25:35] -rw-r--r-- 1 boinc boinc    584627 Feb  7 04:47 pilot3.tar.gz
[2026-02-10 12:25:35] -rwx------ 1 boinc boinc     36322 Feb  7 04:50 runpilot2-wrapper.sh
[2026-02-10 12:25:35] -rw-r--r-- 1 boinc boinc      5111 Feb  7 04:52 queuedata.json
[2026-02-10 12:25:35] -rw-r--r-- 1 boinc boinc       100 Feb 10 10:30 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-10 12:25:35] -rwxr-xr-x 1 boinc boinc      7986 Feb 10 10:30 run_atlas
[2026-02-10 12:25:35] -rw-r--r-- 1 boinc boinc       105 Feb 10 10:30 job.xml
[2026-02-10 12:25:35] -rw-r--r-- 2 boinc boinc 651307698 Feb 10 10:30 EVNT.48431078._000249.pool.root.1
[2026-02-10 12:25:35] -rw-r--r-- 2 boinc boinc    597969 Feb 10 10:30 input.tar.gz
[2026-02-10 12:25:35] -rw-r--r-- 2 boinc boinc     15845 Feb 10 10:30 start_atlas.sh
[2026-02-10 12:25:35] drwxrwx--x 2 boinc boinc      4096 Feb 10 10:30 shared
[2026-02-10 12:25:35] -rw-r--r-- 1 boinc boinc         0 Feb 10 10:30 boinc_setup_complete
[2026-02-10 12:25:35] -rw-r--r-- 1 boinc boinc      6449 Feb 10 10:30 init_data.xml
[2026-02-10 12:25:35] -rw-r--r-- 1 boinc boinc         0 Feb 10 10:30 boinc_lockfile
[2026-02-10 12:25:35] -rw-r--r-- 1 boinc boinc      2561 Feb 10 10:30 pandaJob.out
[2026-02-10 12:25:35] -rw------- 1 boinc boinc   1009496 Feb 10 10:30 agis_schedconf.cvmfs.json
[2026-02-10 12:25:35] -rw------- 1 boinc boinc   1512955 Feb 10 10:30 agis_ddmendpoints.agis.ALL.json
[2026-02-10 12:25:35] -rw------- 1 boinc boinc       427 Feb 10 10:30 workernode_map.json
[2026-02-10 12:25:35] drwx------ 5 boinc boinc      4096 Feb 10 10:30 pilot3
[2026-02-10 12:25:35] -rw------- 1 boinc boinc 266993468 Feb 10 12:24 HITS.48431080._014283.pool.root.1
[2026-02-10 12:25:35] -rw-r--r-- 1 boinc boinc       530 Feb 10 12:24 boinc_task_state.xml
[2026-02-10 12:25:35] -rw------- 1 boinc boinc      1017 Feb 10 12:24 memory_monitor_summary.json
[2026-02-10 12:25:35] -rw------- 1 boinc boinc    300297 Feb 10 12:24 log.48431080._014283.job.log.tgz.1
[2026-02-10 12:25:35] -rw------- 1 boinc boinc      6312 Feb 10 12:24 heartbeat.json
[2026-02-10 12:25:35] -rw------- 1 boinc boinc        95 Feb 10 12:25 pilot_heartbeat.json
[2026-02-10 12:25:35] -rw-r--r-- 1 boinc boinc        27 Feb 10 12:25 wrapper_checkpoint.txt
[2026-02-10 12:25:35] -rw-r--r-- 1 boinc boinc      8192 Feb 10 12:25 boinc_mmap_file
[2026-02-10 12:25:35] -rw------- 1 boinc boinc      4821 Feb 10 12:25 pilotlog.txt
[2026-02-10 12:25:35] -rw------- 1 boinc boinc    985360 Feb 10 12:25 log.48431080._014283.job.log.1
[2026-02-10 12:25:35] -rw------- 1 boinc boinc       357 Feb 10 12:25 output.list
[2026-02-10 12:25:35] -rw-r--r-- 1 boinc boinc       620 Feb 10 12:25 runtime_log
[2026-02-10 12:25:35] -rw------- 1 boinc boinc   1300480 Feb 10 12:25 result.tar.gz
[2026-02-10 12:25:35] -rw-r--r-- 1 boinc boinc      8916 Feb 10 12:25 runtime_log.err
[2026-02-10 12:25:35] -rw------- 1 boinc boinc       661 Feb 10 12:25 JQcMDmuVo88nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmBXaKDmjzfBMo.diag
[2026-02-10 12:25:35] -rw-r--r-- 1 boinc boinc     21409 Feb 10 12:25 stderr.txt
[2026-02-10 12:25:35] HITS file was successfully produced:
[2026-02-10 12:25:35] -rw------- 1 boinc boinc 266993468 Feb 10 12:24 shared/HITS.pool.root.1
[2026-02-10 12:25:35]  *** Contents of shared directory: ***
[2026-02-10 12:25:35] total 898660
[2026-02-10 12:25:35] -rw-r--r-- 2 boinc boinc 651307698 Feb 10 10:30 ATLAS.root_0
[2026-02-10 12:25:35] -rw-r--r-- 2 boinc boinc    597969 Feb 10 10:30 input.tar.gz
[2026-02-10 12:25:35] -rw-r--r-- 2 boinc boinc     15845 Feb 10 10:30 start_atlas.sh
[2026-02-10 12:25:35] -rw------- 1 boinc boinc 266993468 Feb 10 12:24 HITS.pool.root.1
[2026-02-10 12:25:35] -rw------- 1 boinc boinc   1300480 Feb 10 12:25 result.tar.gz
12:25:37 (679560): run_atlas exited; CPU time 19841.583738
12:25:37 (679560): called boinc_finish(0)

</stderr_txt>
]]>

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