Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:06:37 (2645202): wrapper (7.7.26015): starting
12:06:37 (2645202): wrapper: running run_atlas (--nthreads 12)
[2026-02-09 12:06:37] Arguments: --nthreads 12
[2026-02-09 12:06:37] Threads: 12
[2026-02-09 12:06:37] Checking for CVMFS
[2026-02-09 12:06:38] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-09 12:06:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-09 12:06:38] Running cvmfs_config stat atlas.cern.ch
[2026-02-09 12:06:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-09 12:06:40] 2.11.5.0 3306151 101670 358796 156063 1 416 25169929 45568001 22475 130560 0 556190908 99.800 348857378 21904 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-02-09 12:06:40] CVMFS is ok
[2026-02-09 12:06:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-09 12:06:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-09 12:06:40] Further information can be found at the LHC@home message board.
[2026-02-09 12:06:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-09 12:06:40] Checking for apptainer binary...
[2026-02-09 12:06:40] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-09 12:06:40] Running /usr/bin/apptainer --version
[2026-02-09 12:06:40] apptainer version 1.4.1-1.el9
[2026-02-09 12:06:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-09 12:06:41] wns0041.triumf.lcg
[2026-02-09 12:06:41] apptainer works
[2026-02-09 12:06:41] Set ATHENA_PROC_NUMBER=12
[2026-02-09 12:06:41] Set ATHENA_CORE_NUMBER=12
[2026-02-09 12:06:42] Starting ATLAS job with PandaID=7006312543
[2026-02-09 12:06:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-09 12:12:20]  *** The last 200 lines of the pilot log: ***
[2026-02-09 12:12:20] 2026-02-09 20:11:44,711 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-09 12:12:20] 2026-02-09 20:11:44,712 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-09 12:12:20] 2026-02-09 20:11:44,712 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-09 12:12:20] 2026-02-09 20:11:44,713 | WARNING  | wrong length of table data, x=[1770667741.0], y=[770.0] (must be same and length>=4)
[2026-02-09 12:12:20] 2026-02-09 20:11:44,713 | INFO     | could have reported an average CPU frequency of 1449 MHz (4 samples)
[2026-02-09 12:12:20] 2026-02-09 20:11:44,713 | INFO     | ..............................
[2026-02-09 12:12:20] 2026-02-09 20:11:44,713 | INFO     | . Timing measurements:
[2026-02-09 12:12:20] 2026-02-09 20:11:44,713 | INFO     | . get job = 0 s
[2026-02-09 12:12:20] 2026-02-09 20:11:44,714 | INFO     | . initial setup = 31 s
[2026-02-09 12:12:20] 2026-02-09 20:11:44,714 | INFO     | . payload setup = 30 s
[2026-02-09 12:12:20] 2026-02-09 20:11:44,714 | INFO     | . stage-in = 0 s
[2026-02-09 12:12:20] 2026-02-09 20:11:44,723 | INFO     | . payload execution = 58 s
[2026-02-09 12:12:20] 2026-02-09 20:11:44,723 | INFO     | . stage-out = 0 s
[2026-02-09 12:12:20] 2026-02-09 20:11:44,723 | INFO     | . log creation = 0 s
[2026-02-09 12:12:20] 2026-02-09 20:11:44,723 | INFO     | ..............................
[2026-02-09 12:12:20] 2026-02-09 20:11:44,724 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-09 12:12:20] 2026-02-09 20:11:44,724 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7006312543/pilotlog.txt
[2026-02-09 12:12:20] 2026-02-09 20:11:44,919 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-02-09 12:12:20] - Log from pilotlog.txt -
[2026-02-09 12:12:20] 2026-02-09 20:11:44,710 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7006312543/memory_monitor_summary.json (trf name=prmon)
[2026-02-09 12:12:20] 2026-02-09 20:11:44,711 | INFO     | extracted standard info from prmon json
[2026-02-09 12:12:20] 2026-02-09 20:11:44,711 | INFO     | extracted standard memory fields from prmon json
[2026-02-09 12:12:20] 2026-02-09 20:11:44,711 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-09 12:12:20] 2026-02-09 20:11:44,712 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-09 12:12:20] 2026-02-09 20:11:44,712 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-09 12:12:20] 2026-02-09 20:11:44,713 | WARNING  | wrong length of table data, x=[1770667741.0], y=[770.0] (must be same and length>=4)
[2026-02-09 12:12:20] 2026-02-09 20:11:44,713 | INFO     | could have reported an average CPU frequency of 1449 MHz (4 samples)
[2026-02-09 12:12:20] 2026-02-09 20:11:44,713 | INFO     | ..............................
[2026-02-09 12:12:20] 2026-02-09 20:11:44,713 | INFO     | . Timing measurements:
[2026-02-09 12:12:20] 2026-02-09 20:11:44,713 | INFO     | . get job = 0 s
[2026-02-09 12:12:20] 2026-02-09 20:11:44,714 | INFO     | . initial setup = 31 s
[2026-02-09 12:12:20] 2026-02-09 20:11:44,714 | INFO     | . payload setup = 30 s
[2026-02-09 12:12:20] 2026-02-09 20:11:44,714 | INFO     | . stage-in = 0 s
[2026-02-09 12:12:20] 2026-02-09 20:11:44,723 | INFO     | . payload execution = 58 s
[2026-02-09 12:12:20] 2026-02-09 20:11:44,723 | INFO     | . stage-out = 0 s
[2026-02-09 12:12:20] 2026-02-09 20:11:44,723 | INFO     | . log creation = 0 s
[2026-02-09 12:12:20] 2026-02-09 20:11:44,723 | INFO     | ..............................
[2026-02-09 12:12:20] 2026-02-09 20:11:44,724 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-09 12:12:20] 2026-02-09 20:11:44,724 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7006312543/pilotlog.txt
[2026-02-09 12:12:20] 2026-02-09 20:11:44,920 | WARNING  | 
[2026-02-09 12:12:20] [begin log extracts]
[2026-02-09 12:12:20] - Log from pilotlog.txt -
[2026-02-09 12:12:20] 2026-02-09 20:11:44,710 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7006312543/memory_monitor_summary.json (trf name=prmon)
[2026-02-09 12:12:20] 2026-02-09 20:11:44,711 | INFO     | extracted standard info from prmon json
[2026-02-09 12:12:20] 2026-02-09 20:11:44,711 | INFO     | extracted standard memory fields from prmon json
[2026-02-09 12:12:20] 2026-02-09 20:11:44,711 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-09 12:12:20] 2026-02-09 20:11:44,712 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-09 12:12:20] 2026-02-09 20:11:44,712 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-09 12:12:20] 2026-02-09 20:11:44,713 | WARNING  | wrong length of table data, x=[1770667741.0], y=[770.0] (must be same and length>=4)
[2026-02-09 12:12:20] 2026-02-09 20:11:44,713 | INFO     | could have reported an average CPU frequency of 1449 MHz (4 samples)
[2026-02-09 12:12:20] 2026-02-09 20:11:44,713 | INFO     | ..............................
[2026-02-09 12:12:20] 2026-02-09 20:11:44,713 | INFO     | . Timing measurements:
[2026-02-09 12:12:20] 2026-02-09 20:11:44,713 | INFO     | . get job = 0 s
[2026-02-09 12:12:20] 2026-02-09 20:11:44,714 | INFO     | . initial setup = 31 s
[2026-02-09 12:12:20] 2026-02-09 20:11:44,714 | INFO     | . payload setup = 30 s
[2026-02-09 12:12:20] 2026-02-09 20:11:44,714 | INFO     | . stage-in = 0 s
[2026-02-09 12:12:20] 2026-02-09 20:11:44,723 | INFO     | . payload execution = 58 s
[2026-02-09 12:12:20] 2026-02-09 20:11:44,723 | INFO     | . stage-out = 0 s
[2026-02-09 12:12:20] 2026-02-09 20:11:44,723 | INFO     | . log creation = 0 s
[2026-02-09 12:12:20] 2026-02-09 20:11:44,723 | INFO     | ..............................
[2026-02-09 12:12:20] 2026-02-09 20:11:44,724 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-09 12:12:20] 2026-02-09 20:11:44,724 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7006312543/pilotlog.txt
[2026-02-09 12:12:20] [end log extracts]
[2026-02-09 12:12:20] 2026-02-09 20:11:44,920 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-02-09 12:12:20] 2026-02-09 20:11:44,921 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-02-09 12:12:20] 2026-02-09 20:11:45,362 | INFO     | 
[2026-02-09 12:12:20] 2026-02-09 20:11:45,362 | INFO     | job summary report
[2026-02-09 12:12:20] 2026-02-09 20:11:45,362 | INFO     | --------------------------------------------------
[2026-02-09 12:12:20] 2026-02-09 20:11:45,362 | INFO     | PanDA job id: 7006312543
[2026-02-09 12:12:20] 2026-02-09 20:11:45,363 | INFO     | task id: 48318018
[2026-02-09 12:12:20] 2026-02-09 20:11:45,363 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-02-09 12:09:33,299 CRITICAL Transform executor raised TransformValidationExceptio
[2026-02-09 12:12:20] 2026-02-09 20:11:45,363 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-09 12:12:20] 2026-02-09 20:11:45,363 | INFO     | pilot state: failed 
[2026-02-09 12:12:20] 2026-02-09 20:11:45,363 | INFO     | transexitcode: 65
[2026-02-09 12:12:20] 2026-02-09 20:11:45,363 | INFO     | exeerrorcode: 65
[2026-02-09 12:12:20] 2026-02-09 20:11:45,363 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-02-09 12:12:20] 2026-02-09 20:11:45,363 | INFO     | exitcode: 65
[2026-02-09 12:12:20] 2026-02-09 20:11:45,363 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-02-09 12:12:20] 2026-02-09 20:11:45,363 | INFO     | cpuconsumptiontime: 23 s
[2026-02-09 12:12:20] 2026-02-09 20:11:45,363 | INFO     | nevents: 0
[2026-02-09 12:12:20] 2026-02-09 20:11:45,364 | INFO     | neventsw: 0
[2026-02-09 12:12:20] 2026-02-09 20:11:45,364 | INFO     | pid: 2658668
[2026-02-09 12:12:20] 2026-02-09 20:11:45,364 | INFO     | pgrp: 2658668
[2026-02-09 12:12:20] 2026-02-09 20:11:45,364 | INFO     | corecount: 12
[2026-02-09 12:12:20] 2026-02-09 20:11:45,364 | INFO     | event service: False
[2026-02-09 12:12:20] 2026-02-09 20:11:45,364 | INFO     | sizes: {0: 2282651, 1: 2283112, 12: 2283112, 93: 2306409, 95: 2310701, 98: 2310729, 216: 2311023}
[2026-02-09 12:12:20] 2026-02-09 20:11:45,364 | INFO     | --------------------------------------------------
[2026-02-09 12:12:20] 2026-02-09 20:11:45,364 | INFO     | 
[2026-02-09 12:12:20] 2026-02-09 20:11:45,364 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-02-09 12:12:20] 2026-02-09 20:11:45,413 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-09 12:12:20] 2026-02-09 20:11:45,415 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-09 12:12:20] 2026-02-09 20:11:45,415 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-09 12:12:20] 2026-02-09 20:11:45,416 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-09 12:12:20] 2026-02-09 20:11:45,416 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-09 12:12:20] 2026-02-09 20:11:45,416 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-09 12:12:20] 2026-02-09 20:11:45,416 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-09 12:12:20] 2026-02-09 20:11:45,416 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-09 12:12:20] 2026-02-09 20:11:45,416 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-09 12:12:20] 2026-02-09 20:11:45,416 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-09 12:12:20] 2026-02-09 20:11:45,416 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-09 12:12:20] 2026-02-09 20:11:45,416 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-09 12:12:20] 2026-02-09 20:11:45,416 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-09 12:12:20] 2026-02-09 20:11:45,417 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-09 12:12:20] 2026-02-09 20:11:45,417 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-09 12:12:20] 2026-02-09 20:11:45,417 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-09 12:12:20] 2026-02-09 20:11:45,417 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-09 12:12:20] 2026-02-09 20:11:45,417 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-09 12:12:20] 2026-02-09 20:11:45,417 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-09 12:12:20] 2026-02-09 20:11:45,417 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-09 12:12:20] 2026-02-09 20:11:45,417 | INFO     | job 7006312543 has completed (purged errors)
[2026-02-09 12:12:20] 2026-02-09 20:11:45,418 | INFO     | overall cleanup function is called
[2026-02-09 12:12:20] 2026-02-09 20:11:46,442 | INFO     | --- collectZombieJob: --- 10, [2658668]
[2026-02-09 12:12:20] 2026-02-09 20:11:46,442 | INFO     | zombie collector waiting for pid 2658668
[2026-02-09 12:12:20] 2026-02-09 20:11:46,442 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-09 12:12:20] 2026-02-09 20:11:46,443 | INFO     | collected zombie processes
[2026-02-09 12:12:20] 2026-02-09 20:11:46,443 | INFO     | will attempt to kill all subprocesses of pid=2658668
[2026-02-09 12:12:20] 2026-02-09 20:11:47,271 | INFO     | process IDs to be killed: [2658668] (in reverse order)
[2026-02-09 12:12:20] 2026-02-09 20:11:47,431 | WARNING  | found no corresponding commands to process id(s)
[2026-02-09 12:12:20] 2026-02-09 20:11:47,432 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-09 12:12:20] 2026-02-09 20:11:47,497 | INFO     | did not find any defunct processes belonging to 2658668
[2026-02-09 12:12:20] 2026-02-09 20:11:47,530 | INFO     | did not find any defunct processes belonging to 2658668
[2026-02-09 12:12:20] 2026-02-09 20:11:47,531 | INFO     | ready for new job
[2026-02-09 12:12:20] 2026-02-09 20:11:47,531 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-09 12:12:20] 2026-02-09 20:11:47,534 | INFO     | **************************************
[2026-02-09 12:12:20] 2026-02-09 20:11:47,534 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-09 12:12:20] 2026-02-09 20:11:47,534 | INFO     | **************************************
[2026-02-09 12:12:20] 2026-02-09 20:11:47,534 | INFO     | 
[2026-02-09 12:12:20] 2026-02-09 20:11:47,598 | INFO     | architecture information:
[2026-02-09 12:12:20] 2026-02-09 20:11:47,638 | INFO     | executing command: cat /etc/os-release
[2026-02-09 12:12:20] 2026-02-09 20:11:47,655 | INFO     | cat /etc/os-release:
[2026-02-09 12:12:20] NAME="CentOS Linux"
[2026-02-09 12:12:20] VERSION="7 (Core)"
[2026-02-09 12:12:20] ID="centos"
[2026-02-09 12:12:20] ID_LIKE="rhel fedora"
[2026-02-09 12:12:20] VERSION_ID="7"
[2026-02-09 12:12:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-09 12:12:20] ANSI_COLOR="0;31"
[2026-02-09 12:12:20] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-09 12:12:20] HOME_URL="https://www.centos.org/"
[2026-02-09 12:12:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-09 12:12:20] 
[2026-02-09 12:12:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-09 12:12:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-09 12:12:20] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-09 12:12:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-09 12:12:20] 
[2026-02-09 12:12:20] 2026-02-09 20:11:47,656 | INFO     | **************************************
[2026-02-09 12:12:20] 2026-02-09 20:11:48,167 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-02-09 12:12:20] 2026-02-09 20:11:48,221 | INFO     | sufficient remaining disk space (2091257954304 B)
[2026-02-09 12:12:20] 2026-02-09 20:11:48,221 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-09 12:12:20] 2026-02-09 20:11:48,222 | INFO     | current server update state: UPDATING_FINAL
[2026-02-09 12:12:20] 2026-02-09 20:11:48,222 | INFO     | update_server=False
[2026-02-09 12:12:20] 2026-02-09 20:11:48,222 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-09 12:12:20] 2026-02-09 20:11:48,237 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-09 12:12:20] 2026-02-09 20:11:48,507 | INFO     | all payload control threads have been joined
[2026-02-09 12:12:20] 2026-02-09 20:11:48,721 | INFO     | all data control threads have been joined
[2026-02-09 12:12:20] 2026-02-09 20:11:49,048 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-09 12:12:20] 2026-02-09 20:11:49,048 | INFO     | aborting loop
[2026-02-09 12:12:20] 2026-02-09 20:11:49,228 | INFO     | [job] retrieve thread has finished
[2026-02-09 12:12:20] 2026-02-09 20:11:49,405 | INFO     | all job control threads have been joined
[2026-02-09 12:12:20] 2026-02-09 20:11:49,431 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-09 12:12:20] 2026-02-09 20:11:49,498 | INFO     | [job] create_data_payload thread has finished
[2026-02-09 12:12:20] 2026-02-09 20:11:49,513 | INFO     | [payload] control thread has finished
[2026-02-09 12:12:20] 2026-02-09 20:11:49,710 | INFO     | [payload] execute_payloads thread has finished
[2026-02-09 12:12:20] 2026-02-09 20:11:49,727 | INFO     | [payload] validate_pre thread has finished
[2026-02-09 12:12:20] 2026-02-09 20:11:49,734 | INFO     | [data] control thread has finished
[2026-02-09 12:12:20] 2026-02-09 20:11:50,054 | INFO     | [job] job monitor thread has finished
[2026-02-09 12:12:20] 2026-02-09 20:11:50,244 | INFO     | [data] copytool_out thread has finished
[2026-02-09 12:12:20] 2026-02-09 20:11:50,249 | INFO     | [payload] validate_post thread has finished
[2026-02-09 12:12:20] 2026-02-09 20:11:50,321 | INFO     | [data] copytool_in thread has finished
[2026-02-09 12:12:20] 2026-02-09 20:11:50,324 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-09 12:12:20] 2026-02-09 20:11:50,373 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-09 12:12:20] 2026-02-09 20:11:50,405 | INFO     | [job] validate thread has finished
[2026-02-09 12:12:20] 2026-02-09 20:11:50,411 | INFO     | [job] control thread has finished
[2026-02-09 12:12:20] 2026-02-09 20:11:50,557 | INFO     | [payload] failed_post thread has finished
[2026-02-09 12:12:20] 2026-02-09 20:11:51,380 | INFO     | [job] queue monitor thread has finished
[2026-02-09 12:12:20] 2026-02-09 20:11:54,333 | INFO     | [data] queue_monitor thread has finished
[2026-02-09 12:12:20] 2026-02-09 20:11:55,860 | INFO     | [monitor] cgroup control has ended
[2026-02-09 12:12:20] 2026-02-09 20:11:57,842 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139972354983744)>', '<ExcThread(monitor, started 139971792967424)>']
[2026-02-09 12:12:20] 2026-02-09 20:12:02,867 | INFO     | all workflow threads have been joined
[2026-02-09 12:12:20] 2026-02-09 20:12:02,867 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-09 12:12:20] 2026-02-09 20:12:02,868 | INFO     | traces error code: 0
[2026-02-09 12:12:20] 2026-02-09 20:12:02,868 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-09 12:12:20] 2026-02-09 20:12:19,427 | INFO     | PID=2649055 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-09 12:12:20] 2026-02-09 20:12:19,427 | INFO     | .. there are 35 such processes running
[2026-02-09 12:12:20] 2026-02-09 20:12:19,428 | INFO     | found 0 job(s) in 20 queues
[2026-02-09 12:12:20] 2026-02-09 20:12:19,428 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-09 12:12:20] 2026-02-09 20:12:19,428 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-09 12:12:20] 2026-02-09 20:12:19,428 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-09 12:12:20] 2026-02-09 20:12:19,428 | INFO     | [monitor] control thread has ended
[2026-02-09 12:12:20] 2026-02-09 20:12:20,192 [wrapper] ==== pilot stdout END ====
[2026-02-09 12:12:20] 2026-02-09 20:12:20,206 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-09 12:12:20] 2026-02-09 20:12:20,213 [wrapper] pilotpid: 2649055
[2026-02-09 12:12:20] 2026-02-09 20:12:20,224 [wrapper] Pilot exit status: 0
[2026-02-09 12:12:20] 2026-02-09 20:12:20,335 [wrapper] pandaids: 7006312543
[2026-02-09 12:12:20] 2026-02-09 20:12:20,476 [wrapper] cleanup supervisor_pilot 2649061 2649056
[2026-02-09 12:12:20] 2026-02-09 20:12:20,479 [wrapper] Test setup, not cleaning
[2026-02-09 12:12:20] 2026-02-09 20:12:20,483 [wrapper] apfmon messages muted
[2026-02-09 12:12:20] 2026-02-09 20:12:20,486 [wrapper] ==== wrapper stdout END ====
[2026-02-09 12:12:20] 2026-02-09 20:12:20,489 [wrapper] ==== wrapper stderr END ====
[2026-02-09 12:12:20]  *** Error codes and diagnostics ***
[2026-02-09 12:12:20]     "exeErrorCode": 65,
[2026-02-09 12:12:20]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-02-09 12:12:20]     "pilotErrorCode": 1305,
[2026-02-09 12:12:20]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-02-09 12:12:20]  *** Listing of results directory ***
[2026-02-09 12:12:20] total 496280
[2026-02-09 12:12:20] -rwx------. 1 boinc boinc     36322 Feb  9 05:23 runpilot2-wrapper.sh
[2026-02-09 12:12:20] -rw-r--r--. 1 boinc boinc    584627 Feb  9 05:24 pilot3.tar.gz
[2026-02-09 12:12:20] -rw-r--r--. 1 boinc boinc      5111 Feb  9 05:25 queuedata.json
[2026-02-09 12:12:20] -rw-r--r--. 1 boinc boinc       100 Feb  9 12:06 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-09 12:12:20] -rwxr-xr-x. 1 boinc boinc      7986 Feb  9 12:06 run_atlas
[2026-02-09 12:12:20] -rw-r--r--. 1 boinc boinc       105 Feb  9 12:06 job.xml
[2026-02-09 12:12:20] -rw-r--r--. 2 boinc boinc 504032316 Feb  9 12:06 EVNT.48318016._000134.pool.root.1
[2026-02-09 12:12:20] -rw-r--r--. 1 boinc boinc      6594 Feb  9 12:06 init_data.xml
[2026-02-09 12:12:20] -rw-r--r--. 2 boinc boinc     15845 Feb  9 12:06 start_atlas.sh
[2026-02-09 12:12:20] drwxrwx--x. 2 boinc boinc      4096 Feb  9 12:06 shared
[2026-02-09 12:12:20] -rw-r--r--. 2 boinc boinc    597947 Feb  9 12:06 input.tar.gz
[2026-02-09 12:12:20] -rw-r--r--. 1 boinc boinc         0 Feb  9 12:06 boinc_lockfile
[2026-02-09 12:12:20] -rw-r--r--. 1 boinc boinc      2521 Feb  9 12:06 pandaJob.out
[2026-02-09 12:12:20] -rw-------. 1 boinc boinc   1009496 Feb  9 12:07 agis_schedconf.cvmfs.json
[2026-02-09 12:12:20] -rw-------. 1 boinc boinc   1513144 Feb  9 12:07 agis_ddmendpoints.agis.ALL.json
[2026-02-09 12:12:20] -rw-------. 1 boinc boinc       445 Feb  9 12:07 workernode_map.json
[2026-02-09 12:12:20] drwx------. 5 boinc boinc      4096 Feb  9 12:07 pilot3
[2026-02-09 12:12:20] -rw-r--r--. 1 boinc boinc       524 Feb  9 12:09 boinc_task_state.xml
[2026-02-09 12:12:20] -rw-------. 1 boinc boinc       958 Feb  9 12:09 memory_monitor_summary.json
[2026-02-09 12:12:20] -rw-------. 1 boinc boinc     21521 Feb  9 12:09 log.48318018._006836.job.log.tgz.1
[2026-02-09 12:12:20] -rw-------. 1 boinc boinc        95 Feb  9 12:11 pilot_heartbeat.json
[2026-02-09 12:12:20] -rw-------. 1 boinc boinc      7054 Feb  9 12:11 heartbeat.json
[2026-02-09 12:12:20] -rw-r--r--. 1 boinc boinc      8192 Feb  9 12:12 boinc_mmap_file
[2026-02-09 12:12:20] -rw-r--r--. 1 boinc boinc        23 Feb  9 12:12 wrapper_checkpoint.txt
[2026-02-09 12:12:20] -rw-------. 1 boinc boinc       823 Feb  9 12:12 pilotlog.txt
[2026-02-09 12:12:20] -rw-------. 1 boinc boinc     88093 Feb  9 12:12 log.48318018._006836.job.log.1
[2026-02-09 12:12:20] -rw-------. 1 boinc boinc       188 Feb  9 12:12 output.list
[2026-02-09 12:12:20] -rw-r--r--. 1 boinc boinc       620 Feb  9 12:12 runtime_log
[2026-02-09 12:12:20] -rw-------. 1 boinc boinc    133120 Feb  9 12:12 result.tar.gz
[2026-02-09 12:12:20] -rw-------. 1 boinc boinc       643 Feb  9 12:12 YbxNDmtPg98nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm54fKDmvubcJo.diag
[2026-02-09 12:12:20] -rw-r--r--. 1 boinc boinc      8635 Feb  9 12:12 runtime_log.err
[2026-02-09 12:12:20] -rw-r--r--. 1 boinc boinc     21778 Feb  9 12:12 stderr.txt
[2026-02-09 12:12:20] No HITS result produced
[2026-02-09 12:12:20]  *** Contents of shared directory: ***
[2026-02-09 12:12:20] total 492956
[2026-02-09 12:12:20] -rw-r--r--. 2 boinc boinc 504032316 Feb  9 12:06 ATLAS.root_0
[2026-02-09 12:12:20] -rw-r--r--. 2 boinc boinc     15845 Feb  9 12:06 start_atlas.sh
[2026-02-09 12:12:20] -rw-r--r--. 2 boinc boinc    597947 Feb  9 12:06 input.tar.gz
[2026-02-09 12:12:20] -rw-------. 1 boinc boinc    133120 Feb  9 12:12 result.tar.gz
12:12:21 (2645202): run_atlas exited; CPU time 33.119234
12:12:21 (2645202): called boinc_finish(0)

</stderr_txt>
]]>

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