Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:52:14 (1701127): wrapper (7.7.26015): starting
14:52:14 (1701127): wrapper: running run_atlas (--nthreads 8)
[2026-02-09 14:52:14] Arguments: --nthreads 8
[2026-02-09 14:52:14] Threads: 8
[2026-02-09 14:52:14] Checking for CVMFS
[2026-02-09 14:52:15] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-09 14:52:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-09 14:52:15] Running cvmfs_config stat atlas.cern.ch
[2026-02-09 14:52:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-09 14:52:16] 2.13.3.0 6248 59067 220472 156063 3 584 31192987 40960001 24698 16776704 0 90982867 99.727 73716128 38244 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-09 14:52:16] CVMFS is ok
[2026-02-09 14:52:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-09 14:52:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-09 14:52:16] Further information can be found at the LHC@home message board.
[2026-02-09 14:52:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-09 14:52:16] Checking for apptainer binary...
[2026-02-09 14:52:16] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-09 14:52:16] Running /usr/bin/apptainer --version
[2026-02-09 14:52:17] apptainer version 1.4.5-2.el9
[2026-02-09 14:52:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-09 14:52:17] c-211-35-1.aglt2.org
[2026-02-09 14:52:17] apptainer works
[2026-02-09 14:52:17] Set ATHENA_PROC_NUMBER=8
[2026-02-09 14:52:17] Set ATHENA_CORE_NUMBER=8
[2026-02-09 14:52:17] Starting ATLAS job with PandaID=7006311084
[2026-02-09 14:52:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-09 17:16:54]  *** The last 200 lines of the pilot log: ***
[2026-02-09 17:16:54] 2026-02-09 22:16:21,256 | INFO     | mean y: 2482017.0714285714
[2026-02-09 17:16:54] 2026-02-09 22:16:21,256 | INFO     | intersect: -16869725191.564413
[2026-02-09 17:16:54] 2026-02-09 22:16:21,256 | INFO     | chi2: 2.6601634268267866
[2026-02-09 17:16:54] 2026-02-09 22:16:21,256 | INFO     | sum of square deviations: 762792217.5999992
[2026-02-09 17:16:54] 2026-02-09 22:16:21,257 | INFO     | sum of deviations: 16399304790.533316
[2026-02-09 17:16:54] 2026-02-09 22:16:21,257 | INFO     | mean x: 1770670963.1333334
[2026-02-09 17:16:54] 2026-02-09 22:16:21,257 | INFO     | mean y: 2495957.637037037
[2026-02-09 17:16:54] 2026-02-09 22:16:21,257 | INFO     | intersect: -38065240102.29985
[2026-02-09 17:16:54] 2026-02-09 22:16:21,258 | INFO     | chi2: 1.9917620426011975
[2026-02-09 17:16:54] 2026-02-09 22:16:21,258 | INFO     | current chi2=1.9917620426011975 (change=25.126327859596998 %)
[2026-02-09 17:16:54] 2026-02-09 22:16:21,258 | INFO     | sum of square deviations: 681131060.0076909
[2026-02-09 17:16:54] 2026-02-09 22:16:21,259 | INFO     | sum of deviations: 15794900395.076923
[2026-02-09 17:16:54] 2026-02-09 22:16:21,259 | INFO     | mean x: 1770670810.6384616
[2026-02-09 17:16:54] 2026-02-09 22:16:21,259 | INFO     | mean y: 2494828.3846153845
[2026-02-09 17:16:54] 2026-02-09 22:16:21,259 | INFO     | intersect: -41057986375.02552
[2026-02-09 17:16:54] 2026-02-09 22:16:21,259 | INFO     | chi2: 1.9953158541005929
[2026-02-09 17:16:54] 2026-02-09 22:16:21,259 | INFO     | current chi2=1.9953158541005929 (change=-0.178425505827703 %)
[2026-02-09 17:16:54] 2026-02-09 22:16:21,259 | INFO     | right removable region: 129
[2026-02-09 17:16:54] 2026-02-09 22:16:21,260 | INFO     | sum of square deviations: 762788924.325927
[2026-02-09 17:16:54] 2026-02-09 22:16:21,260 | INFO     | sum of deviations: -17828448738.066666
[2026-02-09 17:16:54] 2026-02-09 22:16:21,260 | INFO     | mean x: 1770671268.1407406
[2026-02-09 17:16:54] 2026-02-09 22:16:21,260 | INFO     | mean y: 2526452.2666666666
[2026-02-09 17:16:54] 2026-02-09 22:16:21,261 | INFO     | intersect: 41387922764.767494
[2026-02-09 17:16:54] 2026-02-09 22:16:21,261 | INFO     | chi2: 0.8812900058619084
[2026-02-09 17:16:54] 2026-02-09 22:16:21,261 | INFO     | current chi2=0.8812900058619084 (change=66.87083218367648 %)
[2026-02-09 17:16:54] 2026-02-09 22:16:21,261 | INFO     | sum of square deviations: 681124838.0076909
[2026-02-09 17:16:54] 2026-02-09 22:16:21,262 | INFO     | sum of deviations: -19942093240.184605
[2026-02-09 17:16:54] 2026-02-09 22:16:21,262 | INFO     | mean x: 1770671420.6384616
[2026-02-09 17:16:54] 2026-02-09 22:16:21,262 | INFO     | mean y: 2530318.676923077
[2026-02-09 17:16:54] 2026-02-09 22:16:21,262 | INFO     | intersect: 51844560733.23013
[2026-02-09 17:16:54] 2026-02-09 22:16:21,262 | INFO     | chi2: 0.8466532482326921
[2026-02-09 17:16:54] 2026-02-09 22:16:21,262 | INFO     | current chi2=0.8466532482326921 (change=3.9302337935106104 %)
[2026-02-09 17:16:54] 2026-02-09 22:16:21,262 | INFO     | left removable region: 20
[2026-02-09 17:16:54] 2026-02-09 22:16:21,263 | INFO     | sum of square deviations: 401519329.6697241
[2026-02-09 17:16:54] 2026-02-09 22:16:21,263 | INFO     | sum of deviations: -302455604.440367
[2026-02-09 17:16:54] 2026-02-09 22:16:21,263 | INFO     | mean x: 1770671390.0550458
[2026-02-09 17:16:54] 2026-02-09 22:16:21,263 | INFO     | mean y: 2521887.0733944955
[2026-02-09 17:16:54] 2026-02-09 22:16:21,264 | INFO     | intersect: 1336329367.7366247
[2026-02-09 17:16:54] 2026-02-09 22:16:21,264 | INFO     | chi2: 0.03970217773726032
[2026-02-09 17:16:54] 2026-02-09 22:16:21,264 | INFO     | current memory leak: -0.75 B/s (using 109 data points, chi2=0.04)
[2026-02-09 17:16:54] 2026-02-09 22:16:21,264 | INFO     | could have reported an average CPU frequency of 2694 MHz (8 samples)
[2026-02-09 17:16:54] 2026-02-09 22:16:21,265 | INFO     | ..............................
[2026-02-09 17:16:54] 2026-02-09 22:16:21,265 | INFO     | . Timing measurements:
[2026-02-09 17:16:54] 2026-02-09 22:16:21,265 | INFO     | . get job = 0 s
[2026-02-09 17:16:54] 2026-02-09 22:16:21,265 | INFO     | . initial setup = 28 s
[2026-02-09 17:16:54] 2026-02-09 22:16:21,265 | INFO     | . payload setup = 28 s
[2026-02-09 17:16:54] 2026-02-09 22:16:21,265 | INFO     | . stage-in = 0 s
[2026-02-09 17:16:54] 2026-02-09 22:16:21,265 | INFO     | . payload execution = 8519 s
[2026-02-09 17:16:54] 2026-02-09 22:16:21,265 | INFO     | . stage-out = 1 s
[2026-02-09 17:16:54] 2026-02-09 22:16:21,265 | INFO     | . log creation = 0 s
[2026-02-09 17:16:54] 2026-02-09 22:16:21,265 | INFO     | ..............................
[2026-02-09 17:16:54] 2026-02-09 22:16:21,362 | INFO     | 
[2026-02-09 17:16:54] 2026-02-09 22:16:21,363 | INFO     | job summary report
[2026-02-09 17:16:54] 2026-02-09 22:16:21,363 | INFO     | --------------------------------------------------
[2026-02-09 17:16:54] 2026-02-09 22:16:21,364 | INFO     | PanDA job id: 7006311084
[2026-02-09 17:16:54] 2026-02-09 22:16:21,364 | INFO     | task id: 48318018
[2026-02-09 17:16:54] 2026-02-09 22:16:21,364 | INFO     | errors: (none)
[2026-02-09 17:16:54] 2026-02-09 22:16:21,364 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-09 17:16:54] 2026-02-09 22:16:21,364 | INFO     | pilot state: finished 
[2026-02-09 17:16:54] 2026-02-09 22:16:21,364 | INFO     | transexitcode: 0
[2026-02-09 17:16:54] 2026-02-09 22:16:21,364 | INFO     | exeerrorcode: 0
[2026-02-09 17:16:54] 2026-02-09 22:16:21,364 | INFO     | exeerrordiag: 
[2026-02-09 17:16:54] 2026-02-09 22:16:21,364 | INFO     | exitcode: 0
[2026-02-09 17:16:54] 2026-02-09 22:16:21,364 | INFO     | exitmsg: OK
[2026-02-09 17:16:54] 2026-02-09 22:16:21,364 | INFO     | cpuconsumptiontime: 45831 s
[2026-02-09 17:16:54] 2026-02-09 22:16:21,364 | INFO     | nevents: 400
[2026-02-09 17:16:54] 2026-02-09 22:16:21,364 | INFO     | neventsw: 0
[2026-02-09 17:16:54] 2026-02-09 22:16:21,365 | INFO     | pid: 1711332
[2026-02-09 17:16:54] 2026-02-09 22:16:21,365 | INFO     | pgrp: 1711332
[2026-02-09 17:16:54] 2026-02-09 22:16:21,365 | INFO     | corecount: 8
[2026-02-09 17:16:54] 2026-02-09 22:16:21,365 | INFO     | event service: False
[2026-02-09 17:16:54] 2026-02-09 22:16:21,365 | INFO     | sizes: {0: 2282654, 1: 2282682, 2: 2283115, 12: 2283143, 8552: 2311264, 8555: 2320262, 8557: 2320446, 8558: 2320640}
[2026-02-09 17:16:54] 2026-02-09 22:16:21,365 | INFO     | --------------------------------------------------
[2026-02-09 17:16:54] 2026-02-09 22:16:21,365 | INFO     | 
[2026-02-09 17:16:54] 2026-02-09 22:16:21,365 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-09 17:16:54] 2026-02-09 22:16:21,444 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-09 17:16:54] 2026-02-09 22:16:21,444 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-09 17:16:54] 2026-02-09 22:16:21,445 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-09 17:16:54] 2026-02-09 22:16:21,445 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-09 17:16:54] 2026-02-09 22:16:21,445 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-09 17:16:54] 2026-02-09 22:16:21,445 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-09 17:16:54] 2026-02-09 22:16:21,445 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-09 17:16:54] 2026-02-09 22:16:21,445 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-09 17:16:54] 2026-02-09 22:16:21,445 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-09 17:16:54] 2026-02-09 22:16:21,445 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-09 17:16:54] 2026-02-09 22:16:21,445 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-09 17:16:54] 2026-02-09 22:16:21,445 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-09 17:16:54] 2026-02-09 22:16:21,445 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-09 17:16:54] 2026-02-09 22:16:21,445 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-09 17:16:54] 2026-02-09 22:16:21,445 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-09 17:16:54] 2026-02-09 22:16:21,445 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-09 17:16:54] 2026-02-09 22:16:21,446 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-09 17:16:54] 2026-02-09 22:16:21,446 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-09 17:16:54] 2026-02-09 22:16:21,446 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-09 17:16:54] 2026-02-09 22:16:21,446 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-09 17:16:54] 2026-02-09 22:16:21,446 | INFO     | job 7006311084 has completed (purged errors)
[2026-02-09 17:16:54] 2026-02-09 22:16:21,446 | INFO     | overall cleanup function is called
[2026-02-09 17:16:54] 2026-02-09 22:16:22,353 | WARNING  | process 1711332 can no longer be monitored (due to stat problems) - aborting
[2026-02-09 17:16:54] 2026-02-09 22:16:22,458 | INFO     | --- collectZombieJob: --- 10, [1711332]
[2026-02-09 17:16:54] 2026-02-09 22:16:22,462 | INFO     | zombie collector waiting for pid 1711332
[2026-02-09 17:16:54] 2026-02-09 22:16:22,462 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-09 17:16:54] 2026-02-09 22:16:22,462 | INFO     | collected zombie processes
[2026-02-09 17:16:54] 2026-02-09 22:16:22,462 | INFO     | will attempt to kill all subprocesses of pid=1711332
[2026-02-09 17:16:54] 2026-02-09 22:16:22,861 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-09 17:16:54] 2026-02-09 22:16:22,862 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-09 17:16:54] 2026-02-09 22:16:22,863 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-02-09 17:16:54] 2026-02-09 22:16:22,863 | WARNING  | maxPSS not found in memory monitor output
[2026-02-09 17:16:54] 2026-02-09 22:16:22,864 | INFO     | skipping file size check of payload stdout file (/tmp/boinchome/slots/0/PanDA_Pilot-7006311084/payload.stdout) since it has not been created yet
[2026-02-09 17:16:54] 2026-02-09 22:16:22,864 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-09 17:16:54] 2026-02-09 22:16:22,939 | INFO     | sufficient remaining disk space (123059830784 B)
[2026-02-09 17:16:54] 2026-02-09 22:16:22,939 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-02-09 17:16:54] 2026-02-09 22:16:22,939 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-7006311084/HITS.48318018._006376.pool.root.1 since it does not exist
[2026-02-09 17:16:54] 2026-02-09 22:16:23,553 | INFO     | process IDs to be killed: [1711332] (in reverse order)
[2026-02-09 17:16:54] 2026-02-09 22:16:23,789 | INFO     | number of running child processes to parent process 1711332: 1
[2026-02-09 17:16:54] 2026-02-09 22:16:23,789 | INFO     | maximum number of monitored processes: 6
[2026-02-09 17:16:54] 2026-02-09 22:16:23,789 | INFO     | aborting job monitoring since job object (job id=7006311084) has expired
[2026-02-09 17:16:54] 2026-02-09 22:16:24,231 | WARNING  | found no corresponding commands to process id(s)
[2026-02-09 17:16:54] 2026-02-09 22:16:24,231 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-09 17:16:54] 2026-02-09 22:16:24,249 | INFO     | did not find any defunct processes belonging to 1711332
[2026-02-09 17:16:54] 2026-02-09 22:16:24,280 | INFO     | did not find any defunct processes belonging to 1711332
[2026-02-09 17:16:54] 2026-02-09 22:16:24,281 | INFO     | ready for new job
[2026-02-09 17:16:54] 2026-02-09 22:16:24,281 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-09 17:16:54] 2026-02-09 22:16:24,286 | INFO     | **************************************
[2026-02-09 17:16:54] 2026-02-09 22:16:24,287 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-09 17:16:54] 2026-02-09 22:16:24,287 | INFO     | **************************************
[2026-02-09 17:16:54] 2026-02-09 22:16:24,287 | INFO     | 
[2026-02-09 17:16:54] 2026-02-09 22:16:24,301 | INFO     | architecture information:
[2026-02-09 17:16:54] 2026-02-09 22:16:24,306 | INFO     | executing command: cat /etc/os-release
[2026-02-09 17:16:54] 2026-02-09 22:16:24,550 | INFO     | cat /etc/os-release:
[2026-02-09 17:16:54] NAME="CentOS Linux"
[2026-02-09 17:16:54] VERSION="7 (Core)"
[2026-02-09 17:16:54] ID="centos"
[2026-02-09 17:16:54] ID_LIKE="rhel fedora"
[2026-02-09 17:16:54] VERSION_ID="7"
[2026-02-09 17:16:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-09 17:16:54] ANSI_COLOR="0;31"
[2026-02-09 17:16:54] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-09 17:16:54] HOME_URL="https://www.centos.org/"
[2026-02-09 17:16:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-09 17:16:54] 
[2026-02-09 17:16:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-09 17:16:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-09 17:16:54] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-09 17:16:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-09 17:16:54] 
[2026-02-09 17:16:54] 2026-02-09 22:16:24,551 | INFO     | **************************************
[2026-02-09 17:16:54] 2026-02-09 22:16:25,054 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-09 17:16:54] 2026-02-09 22:16:25,162 | INFO     | sufficient remaining disk space (123060879360 B)
[2026-02-09 17:16:54] 2026-02-09 22:16:25,162 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-09 17:16:54] 2026-02-09 22:16:25,162 | INFO     | current server update state: UPDATING_FINAL
[2026-02-09 17:16:54] 2026-02-09 22:16:25,162 | INFO     | update_server=False
[2026-02-09 17:16:54] 2026-02-09 22:16:25,162 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-09 17:16:54] 2026-02-09 22:16:25,163 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-09 17:16:54] 2026-02-09 22:16:25,163 | INFO     | aborting loop
[2026-02-09 17:16:54] 2026-02-09 22:16:25,240 | INFO     | all job control threads have been joined
[2026-02-09 17:16:54] 2026-02-09 22:16:25,615 | INFO     | all data control threads have been joined
[2026-02-09 17:16:54] 2026-02-09 22:16:25,651 | INFO     | all payload control threads have been joined
[2026-02-09 17:16:54] 2026-02-09 22:16:26,168 | INFO     | [job] retrieve thread has finished
[2026-02-09 17:16:54] 2026-02-09 22:16:26,168 | INFO     | [job] job monitor thread has finished
[2026-02-09 17:16:54] 2026-02-09 22:16:26,249 | INFO     | [job] control thread has finished
[2026-02-09 17:16:54] 2026-02-09 22:16:26,376 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-09 17:16:54] 2026-02-09 22:16:26,482 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-09 17:16:54] 2026-02-09 22:16:26,621 | INFO     | [data] control thread has finished
[2026-02-09 17:16:54] 2026-02-09 22:16:26,657 | INFO     | [payload] control thread has finished
[2026-02-09 17:16:54] 2026-02-09 22:16:26,707 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-09 17:16:54] 2026-02-09 22:16:26,751 | INFO     | [payload] validate_post thread has finished
[2026-02-09 17:16:54] 2026-02-09 22:16:27,006 | INFO     | [data] copytool_in thread has finished
[2026-02-09 17:16:54] 2026-02-09 22:16:27,111 | INFO     | [payload] execute_payloads thread has finished
[2026-02-09 17:16:54] 2026-02-09 22:16:27,316 | INFO     | [job] validate thread has finished
[2026-02-09 17:16:54] 2026-02-09 22:16:27,369 | INFO     | [payload] failed_post thread has finished
[2026-02-09 17:16:54] 2026-02-09 22:16:27,384 | INFO     | [job] queue monitor thread has finished
[2026-02-09 17:16:54] 2026-02-09 22:16:27,551 | INFO     | [job] create_data_payload thread has finished
[2026-02-09 17:16:54] 2026-02-09 22:16:27,551 | INFO     | [payload] validate_pre thread has finished
[2026-02-09 17:16:54] 2026-02-09 22:16:28,489 | INFO     | [data] copytool_out thread has finished
[2026-02-09 17:16:54] 2026-02-09 22:16:30,716 | INFO     | [data] queue_monitor thread has finished
[2026-02-09 17:16:54] 2026-02-09 22:16:35,979 | INFO     | job.realtimelogging is not enabled
[2026-02-09 17:16:54] 2026-02-09 22:16:36,985 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-09 17:16:54] 2026-02-09 22:16:45,204 | INFO     | [monitor] cgroup control has ended
[2026-02-09 17:16:54] 2026-02-09 22:16:46,459 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140530765342528)>', '<ExcThread(monitor, started 140530415544064)>']
[2026-02-09 17:16:54] 2026-02-09 22:16:51,485 | INFO     | all workflow threads have been joined
[2026-02-09 17:16:54] 2026-02-09 22:16:51,485 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-09 17:16:54] 2026-02-09 22:16:51,485 | INFO     | traces error code: 0
[2026-02-09 17:16:54] 2026-02-09 22:16:51,486 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-09 17:16:54] 2026-02-09 22:16:53,647 | INFO     | PID=1706028 has CPU usage=8.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-09 17:16:54] 2026-02-09 22:16:53,647 | INFO     | .. there are 24 such processes running
[2026-02-09 17:16:54] 2026-02-09 22:16:53,648 | INFO     | found 0 job(s) in 20 queues
[2026-02-09 17:16:54] 2026-02-09 22:16:53,648 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-09 17:16:54] 2026-02-09 22:16:53,648 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-09 17:16:54] 2026-02-09 22:16:53,648 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-09 17:16:54] 2026-02-09 22:16:53,649 | INFO     | [monitor] control thread has ended
[2026-02-09 17:16:54] 2026-02-09 22:16:54,102 [wrapper] ==== pilot stdout END ====
[2026-02-09 17:16:54] 2026-02-09 22:16:54,135 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-09 17:16:54] 2026-02-09 22:16:54,186 [wrapper] pilotpid: 1706028
[2026-02-09 17:16:54] 2026-02-09 22:16:54,212 [wrapper] Pilot exit status: 0
[2026-02-09 17:16:54] 2026-02-09 22:16:54,350 [wrapper] pandaids: 7006311084
[2026-02-09 17:16:54] 2026-02-09 22:16:54,490 [wrapper] cleanup supervisor_pilot 2125214 1706029
[2026-02-09 17:16:54] 2026-02-09 22:16:54,497 [wrapper] Test setup, not cleaning
[2026-02-09 17:16:54] 2026-02-09 22:16:54,500 [wrapper] apfmon messages muted
[2026-02-09 17:16:54] 2026-02-09 22:16:54,502 [wrapper] ==== wrapper stdout END ====
[2026-02-09 17:16:54] 2026-02-09 22:16:54,504 [wrapper] ==== wrapper stderr END ====
[2026-02-09 17:16:54]  *** Error codes and diagnostics ***
[2026-02-09 17:16:54]     "exeErrorCode": 0,
[2026-02-09 17:16:54]     "exeErrorDiag": "",
[2026-02-09 17:16:54]     "pilotErrorCode": 0,
[2026-02-09 17:16:54]     "pilotErrorDiag": "",
[2026-02-09 17:16:54]  *** Listing of results directory ***
[2026-02-09 17:16:54] total 672448
[2026-02-09 17:16:54] -rw-r--r--. 1 boincer umatlas    584627 Feb  9 08:19 pilot3.tar.gz
[2026-02-09 17:16:54] -rwx------. 1 boincer umatlas     36322 Feb  9 08:20 runpilot2-wrapper.sh
[2026-02-09 17:16:54] -rw-r--r--. 1 boincer umatlas      5111 Feb  9 08:22 queuedata.json
[2026-02-09 17:16:54] -rw-r--r--. 1 boincer umatlas       100 Feb  9 14:52 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-09 17:16:54] -rwxr-xr-x. 1 boincer umatlas      7986 Feb  9 14:52 run_atlas
[2026-02-09 17:16:54] -rw-r--r--. 1 boincer umatlas       105 Feb  9 14:52 job.xml
[2026-02-09 17:16:54] -rw-r--r--. 2 boincer umatlas 493736393 Feb  9 14:52 EVNT.48318016._000125.pool.root.1
[2026-02-09 17:16:54] -rw-r--r--. 2 boincer umatlas     15845 Feb  9 14:52 start_atlas.sh
[2026-02-09 17:16:54] drwxrwx--x. 2 boincer umatlas      4096 Feb  9 14:52 shared
[2026-02-09 17:16:54] -rw-r--r--. 2 boincer umatlas    597943 Feb  9 14:52 input.tar.gz
[2026-02-09 17:16:54] -rw-r--r--. 1 boincer umatlas         0 Feb  9 14:52 boinc_lockfile
[2026-02-09 17:16:54] -rw-r--r--. 1 boincer umatlas      2521 Feb  9 14:52 pandaJob.out
[2026-02-09 17:16:54] -rw-------. 1 boincer umatlas        57 Feb  9 14:52 setup.sh.local
[2026-02-09 17:16:54] -rw-------. 1 boincer umatlas   1009496 Feb  9 14:53 agis_schedconf.cvmfs.json
[2026-02-09 17:16:54] -rw-------. 1 boincer umatlas   1513144 Feb  9 14:53 agis_ddmendpoints.agis.ALL.json
[2026-02-09 17:16:54] -rw-------. 1 boincer umatlas       444 Feb  9 14:53 workernode_map.json
[2026-02-09 17:16:54] drwx------. 5 boincer umatlas      4096 Feb  9 14:53 pilot3
[2026-02-09 17:16:54] -rw-r--r--. 1 boincer umatlas      6859 Feb  9 17:13 init_data.xml
[2026-02-09 17:16:54] -rw-------. 1 boincer umatlas 187748550 Feb  9 17:15 HITS.48318018._006376.pool.root.1
[2026-02-09 17:16:54] -rw-r--r--. 1 boincer umatlas       530 Feb  9 17:15 boinc_task_state.xml
[2026-02-09 17:16:54] -rw-------. 1 boincer umatlas      1042 Feb  9 17:16 memory_monitor_summary.json
[2026-02-09 17:16:54] -rw-------. 1 boincer umatlas    406095 Feb  9 17:16 log.48318018._006376.job.log.tgz.1
[2026-02-09 17:16:54] -rw-------. 1 boincer umatlas      6393 Feb  9 17:16 heartbeat.json
[2026-02-09 17:16:54] -rw-r--r--. 1 boincer umatlas      8192 Feb  9 17:16 boinc_mmap_file
[2026-02-09 17:16:54] -rw-r--r--. 1 boincer umatlas        27 Feb  9 17:16 wrapper_checkpoint.txt
[2026-02-09 17:16:54] -rw-------. 1 boincer umatlas       823 Feb  9 17:16 pilotlog.txt
[2026-02-09 17:16:54] -rw-------. 1 boincer umatlas        95 Feb  9 17:16 pilot_heartbeat.json
[2026-02-09 17:16:54] -rw-------. 1 boincer umatlas   1171113 Feb  9 17:16 log.48318018._006376.job.log.1
[2026-02-09 17:16:54] -rw-------. 1 boincer umatlas       357 Feb  9 17:16 output.list
[2026-02-09 17:16:54] -rw-r--r--. 1 boincer umatlas       620 Feb  9 17:16 runtime_log
[2026-02-09 17:16:54] -rw-------. 1 boincer umatlas   1597440 Feb  9 17:16 result.tar.gz
[2026-02-09 17:16:54] -rw-------. 1 boincer umatlas       654 Feb  9 17:16 VW2NDm7Mg98nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmmwfKDmFgClVo.diag
[2026-02-09 17:16:54] -rw-r--r--. 1 boincer umatlas      9351 Feb  9 17:16 runtime_log.err
[2026-02-09 17:16:54] -rw-r--r--. 1 boincer umatlas     21532 Feb  9 17:16 stderr.txt
[2026-02-09 17:16:54] HITS file was successfully produced:
[2026-02-09 17:16:54] -rw-------. 1 boincer umatlas 187748550 Feb  9 17:15 shared/HITS.pool.root.1
[2026-02-09 17:16:54]  *** Contents of shared directory: ***
[2026-02-09 17:16:54] total 667688
[2026-02-09 17:16:54] -rw-r--r--. 2 boincer umatlas 493736393 Feb  9 14:52 ATLAS.root_0
[2026-02-09 17:16:54] -rw-r--r--. 2 boincer umatlas     15845 Feb  9 14:52 start_atlas.sh
[2026-02-09 17:16:54] -rw-r--r--. 2 boincer umatlas    597943 Feb  9 14:52 input.tar.gz
[2026-02-09 17:16:54] -rw-------. 1 boincer umatlas 187748550 Feb  9 17:15 HITS.pool.root.1
[2026-02-09 17:16:54] -rw-------. 1 boincer umatlas   1597440 Feb  9 17:16 result.tar.gz
17:16:56 (1701127): run_atlas exited; CPU time 46220.590187
17:16:56 (1701127): called boinc_finish(0)

</stderr_txt>
]]>

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