Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
14:06:55 (11134): wrapper (7.7.26015): starting
14:06:55 (11134): wrapper: running run_atlas (--nthreads 8)
[2026-02-09 14:06:55] Arguments: --nthreads 8
[2026-02-09 14:06:55] Threads: 8
[2026-02-09 14:06:55] Checking for CVMFS
[2026-02-09 14:06:55] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-09 14:06:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-09 14:06:55] Running cvmfs_config stat atlas.cern.ch
[2026-02-09 14:06:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-09 14:06:55] 2.11.2.0 3160 4268 74052 156062 4 3 12490314 18432000 1833 130560 0 3675536 99.991 150048 34781 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-09 14:06:55] CVMFS is ok
[2026-02-09 14:06:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-09 14:06:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-09 14:06:55] Further information can be found at the LHC@home message board.
[2026-02-09 14:06:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-09 14:06:55] Checking for apptainer binary...
[2026-02-09 14:06:55] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-09 14:06:55] Running /usr/bin/apptainer --version
[2026-02-09 14:06:55] apptainer version 1.3.2-1.el7
[2026-02-09 14:06:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-09 14:06:56] c-206-18.aglt2.org
[2026-02-09 14:06:56] apptainer works
[2026-02-09 14:06:56] Set ATHENA_PROC_NUMBER=8
[2026-02-09 14:06:56] Set ATHENA_CORE_NUMBER=8
[2026-02-09 14:06:56] Starting ATLAS job with PandaID=6996985569
[2026-02-09 14:06:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
16:48:20 (8435): wrapper (7.7.26015): starting
16:48:20 (8435): wrapper: running run_atlas (--nthreads 8)
[2026-02-09 16:48:20] Arguments: --nthreads 8
[2026-02-09 16:48:20] Threads: 8
[2026-02-09 16:48:20] This job has been restarted, cleaning up previous attempt
[2026-02-09 16:48:20] Checking for CVMFS
[2026-02-09 16:48:21] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-09 16:48:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-09 16:48:21] Running cvmfs_config stat atlas.cern.ch
[2026-02-09 16:48:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-09 16:48:21] 2.11.2.0 3160 4430 77620 156065 2 32 12501698 18432000 1 130560 0 3783280 99.992 154083 34923 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-09 16:48:21] CVMFS is ok
[2026-02-09 16:48:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-09 16:48:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-09 16:48:21] Further information can be found at the LHC@home message board.
[2026-02-09 16:48:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-09 16:48:21] Checking for apptainer binary...
[2026-02-09 16:48:21] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-09 16:48:21] Running /usr/bin/apptainer --version
[2026-02-09 16:48:21] apptainer version 1.3.2-1.el7
[2026-02-09 16:48:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-09 16:48:22] c-206-18.aglt2.org
[2026-02-09 16:48:22] apptainer works
[2026-02-09 16:48:22] Set ATHENA_PROC_NUMBER=8
[2026-02-09 16:48:22] Set ATHENA_CORE_NUMBER=8
[2026-02-09 16:48:22] Starting ATLAS job with PandaID=6996985569
[2026-02-09 16:48:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-09 20:39:05]  *** The last 200 lines of the pilot log: ***
[2026-02-09 20:39:05] 2026-02-10 01:37:56,029 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-09 20:39:05] 2026-02-10 01:37:56,029 | INFO     | log transfer has been attempted: DONE
[2026-02-09 20:39:05] 2026-02-10 01:37:56,030 | INFO     | job 6996985569 has finished - writing final server update
[2026-02-09 20:39:05] 2026-02-10 01:37:56,030 | INFO     | total number of processed events: 400 (read)
[2026-02-09 20:39:05] 2026-02-10 01:37:56,035 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6996985569/memory_monitor_summary.json (trf name=prmon)
[2026-02-09 20:39:05] 2026-02-10 01:37:56,035 | INFO     | extracted standard info from prmon json
[2026-02-09 20:39:05] 2026-02-10 01:37:56,035 | INFO     | extracted standard memory fields from prmon json
[2026-02-09 20:39:05] 2026-02-10 01:37:56,036 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-09 20:39:05] 2026-02-10 01:37:56,036 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-09 20:39:05] 2026-02-10 01:37:56,036 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-09 20:39:05] 2026-02-10 01:37:56,042 | INFO     | fitting pss+swap vs Time
[2026-02-09 20:39:05] 2026-02-10 01:37:56,043 | INFO     | sum of square deviations: 3579276412.5
[2026-02-09 20:39:05] 2026-02-10 01:37:56,045 | INFO     | sum of deviations: 22458590454.0
[2026-02-09 20:39:05] 2026-02-10 01:37:56,045 | INFO     | mean x: 1770680600.5
[2026-02-09 20:39:05] 2026-02-10 01:37:56,045 | INFO     | mean y: 2528419.5575221237
[2026-02-09 20:39:05] 2026-02-10 01:37:56,046 | INFO     | intersect: -11107815082.439976
[2026-02-09 20:39:05] 2026-02-10 01:37:56,046 | INFO     | chi2: 2.0813989163993822
[2026-02-09 20:39:05] 2026-02-10 01:37:56,047 | INFO     | sum of square deviations: 3346927870.0
[2026-02-09 20:39:05] 2026-02-10 01:37:56,049 | INFO     | sum of deviations: 36931883859.0
[2026-02-09 20:39:05] 2026-02-10 01:37:56,049 | INFO     | mean x: 1770680448.0
[2026-02-09 20:39:05] 2026-02-10 01:37:56,049 | INFO     | mean y: 2537739.076923077
[2026-02-09 20:39:05] 2026-02-10 01:37:56,049 | INFO     | intersect: -19536145852.85184
[2026-02-09 20:39:05] 2026-02-10 01:37:56,050 | INFO     | chi2: 1.3094679031406102
[2026-02-09 20:39:05] 2026-02-10 01:37:56,050 | INFO     | current chi2=1.3094679031406102 (change=37.08712477827833 %)
[2026-02-09 20:39:05] 2026-02-10 01:37:56,050 | INFO     | sum of square deviations: 3124858590.0
[2026-02-09 20:39:05] 2026-02-10 01:37:56,052 | INFO     | sum of deviations: 35859583281.00001
[2026-02-09 20:39:05] 2026-02-10 01:37:56,052 | INFO     | mean x: 1770680295.5
[2026-02-09 20:39:05] 2026-02-10 01:37:56,053 | INFO     | mean y: 2537002.5833333335
[2026-02-09 20:39:05] 2026-02-10 01:37:56,053 | INFO     | intersect: -20317056889.986366
[2026-02-09 20:39:05] 2026-02-10 01:37:56,053 | INFO     | chi2: 1.309938551018556
[2026-02-09 20:39:05] 2026-02-10 01:37:56,053 | INFO     | current chi2=1.309938551018556 (change=-0.03594191784440927 %)
[2026-02-09 20:39:05] 2026-02-10 01:37:56,054 | INFO     | right removable region: 215
[2026-02-09 20:39:05] 2026-02-10 01:37:56,054 | INFO     | sum of square deviations: 3346927870.0
[2026-02-09 20:39:05] 2026-02-10 01:37:56,056 | INFO     | sum of deviations: -10840185377.0
[2026-02-09 20:39:05] 2026-02-10 01:37:56,056 | INFO     | mean x: 1770680753.0
[2026-02-09 20:39:05] 2026-02-10 01:37:56,056 | INFO     | mean y: 2550070.864253394
[2026-02-09 20:39:05] 2026-02-10 01:37:56,057 | INFO     | intersect: 5737513103.09893
[2026-02-09 20:39:05] 2026-02-10 01:37:56,057 | INFO     | chi2: 0.8096548548176364
[2026-02-09 20:39:05] 2026-02-10 01:37:56,057 | INFO     | current chi2=0.8096548548176364 (change=61.10044795169489 %)
[2026-02-09 20:39:05] 2026-02-10 01:37:56,058 | INFO     | sum of square deviations: 3124858590.0
[2026-02-09 20:39:05] 2026-02-10 01:37:56,060 | INFO     | sum of deviations: -12758560926.499998
[2026-02-09 20:39:05] 2026-02-10 01:37:56,060 | INFO     | mean x: 1770680905.5
[2026-02-09 20:39:05] 2026-02-10 01:37:56,060 | INFO     | mean y: 2551358.1805555555
[2026-02-09 20:39:05] 2026-02-10 01:37:56,060 | INFO     | intersect: 7232107372.813504
[2026-02-09 20:39:05] 2026-02-10 01:37:56,061 | INFO     | chi2: 0.7942424377416899
[2026-02-09 20:39:05] 2026-02-10 01:37:56,061 | INFO     | current chi2=0.7942424377416899 (change=1.903578664938404 %)
[2026-02-09 20:39:05] 2026-02-10 01:37:56,061 | INFO     | left removable region: 20
[2026-02-09 20:39:05] 2026-02-10 01:37:56,061 | INFO     | sum of square deviations: 2299168690.0
[2026-02-09 20:39:05] 2026-02-10 01:37:56,063 | INFO     | sum of deviations: 4231630329.0000005
[2026-02-09 20:39:05] 2026-02-10 01:37:56,063 | INFO     | mean x: 1770680875.0
[2026-02-09 20:39:05] 2026-02-10 01:37:56,063 | INFO     | mean y: 2559211.835897436
[2026-02-09 20:39:05] 2026-02-10 01:37:56,064 | INFO     | intersect: -3256386913.4396076
[2026-02-09 20:39:05] 2026-02-10 01:37:56,064 | INFO     | chi2: 0.0022308350373432544
[2026-02-09 20:39:05] 2026-02-10 01:37:56,064 | INFO     | current memory leak: 1.84 B/s (using 195 data points, chi2=0.00)
[2026-02-09 20:39:05] 2026-02-10 01:37:56,065 | INFO     | could have reported an average CPU frequency of 2527 MHz (11 samples)
[2026-02-09 20:39:05] 2026-02-10 01:37:56,065 | INFO     | ..............................
[2026-02-09 20:39:05] 2026-02-10 01:37:56,065 | INFO     | . Timing measurements:
[2026-02-09 20:39:05] 2026-02-10 01:37:56,065 | INFO     | . get job = 0 s
[2026-02-09 20:39:05] 2026-02-10 01:37:56,066 | INFO     | . initial setup = 1 s
[2026-02-09 20:39:05] 2026-02-10 01:37:56,066 | INFO     | . payload setup = 6 s
[2026-02-09 20:39:05] 2026-02-10 01:37:56,066 | INFO     | . stage-in = 0 s
[2026-02-09 20:39:05] 2026-02-10 01:37:56,066 | INFO     | . payload execution = 13733 s
[2026-02-09 20:39:05] 2026-02-10 01:37:56,066 | INFO     | . stage-out = 2 s
[2026-02-09 20:39:05] 2026-02-10 01:37:56,066 | INFO     | . log creation = 0 s
[2026-02-09 20:39:05] 2026-02-10 01:37:56,066 | INFO     | ..............................
[2026-02-09 20:39:05] 2026-02-10 01:37:56,200 | INFO     | 
[2026-02-09 20:39:05] 2026-02-10 01:37:56,201 | INFO     | job summary report
[2026-02-09 20:39:05] 2026-02-10 01:37:56,201 | INFO     | --------------------------------------------------
[2026-02-09 20:39:05] 2026-02-10 01:37:56,201 | INFO     | PanDA job id: 6996985569
[2026-02-09 20:39:05] 2026-02-10 01:37:56,201 | INFO     | task id: 48431080
[2026-02-09 20:39:05] 2026-02-10 01:37:56,201 | INFO     | errors: (none)
[2026-02-09 20:39:05] 2026-02-10 01:37:56,201 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-09 20:39:05] 2026-02-10 01:37:56,202 | INFO     | pilot state: finished 
[2026-02-09 20:39:05] 2026-02-10 01:37:56,202 | INFO     | transexitcode: 0
[2026-02-09 20:39:05] 2026-02-10 01:37:56,202 | INFO     | exeerrorcode: 0
[2026-02-09 20:39:05] 2026-02-10 01:37:56,202 | INFO     | exeerrordiag: 
[2026-02-09 20:39:05] 2026-02-10 01:37:56,202 | INFO     | exitcode: 0
[2026-02-09 20:39:05] 2026-02-10 01:37:56,203 | INFO     | exitmsg: OK
[2026-02-09 20:39:05] 2026-02-10 01:37:56,203 | INFO     | cpuconsumptiontime: 104928 s
[2026-02-09 20:39:05] 2026-02-10 01:37:56,203 | INFO     | nevents: 400
[2026-02-09 20:39:05] 2026-02-10 01:37:56,203 | INFO     | neventsw: 0
[2026-02-09 20:39:05] 2026-02-10 01:37:56,203 | INFO     | pid: 26966
[2026-02-09 20:39:05] 2026-02-10 01:37:56,203 | INFO     | pgrp: 26966
[2026-02-09 20:39:05] 2026-02-10 01:37:56,203 | INFO     | corecount: 8
[2026-02-09 20:39:05] 2026-02-10 01:37:56,204 | INFO     | event service: False
[2026-02-09 20:39:05] 2026-02-10 01:37:56,204 | INFO     | sizes: {0: 2283133, 11: 2283133, 13743: 2313393, 13744: 2313392, 13746: 2322446, 13747: 2322502, 13749: 2322824}
[2026-02-09 20:39:05] 2026-02-10 01:37:56,204 | INFO     | --------------------------------------------------
[2026-02-09 20:39:05] 2026-02-10 01:37:56,204 | INFO     | 
[2026-02-09 20:39:05] 2026-02-10 01:37:56,204 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-09 20:39:05] 2026-02-10 01:37:56,232 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-09 20:39:05] 2026-02-10 01:37:56,233 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-09 20:39:05] 2026-02-10 01:37:56,233 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-09 20:39:05] 2026-02-10 01:37:56,233 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-09 20:39:05] 2026-02-10 01:37:56,233 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-09 20:39:05] 2026-02-10 01:37:56,233 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-09 20:39:05] 2026-02-10 01:37:56,234 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-09 20:39:05] 2026-02-10 01:37:56,234 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-09 20:39:05] 2026-02-10 01:37:56,234 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-09 20:39:05] 2026-02-10 01:37:56,234 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-09 20:39:05] 2026-02-10 01:37:56,234 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-09 20:39:05] 2026-02-10 01:37:56,235 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-09 20:39:05] 2026-02-10 01:37:56,235 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-09 20:39:05] 2026-02-10 01:37:56,235 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-09 20:39:05] 2026-02-10 01:37:56,235 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-09 20:39:05] 2026-02-10 01:37:56,235 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-09 20:39:05] 2026-02-10 01:37:56,236 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-09 20:39:05] 2026-02-10 01:37:56,236 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-09 20:39:05] 2026-02-10 01:37:56,236 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-09 20:39:05] 2026-02-10 01:37:56,236 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-09 20:39:05] 2026-02-10 01:37:56,236 | INFO     | job 6996985569 has completed (purged errors)
[2026-02-09 20:39:05] 2026-02-10 01:37:56,237 | INFO     | overall cleanup function is called
[2026-02-09 20:39:05] 2026-02-10 01:37:57,245 | INFO     | --- collectZombieJob: --- 10, [26966]
[2026-02-09 20:39:05] 2026-02-10 01:37:57,245 | INFO     | zombie collector waiting for pid 26966
[2026-02-09 20:39:05] 2026-02-10 01:37:57,245 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-09 20:39:05] 2026-02-10 01:37:57,246 | INFO     | collected zombie processes
[2026-02-09 20:39:05] 2026-02-10 01:37:57,246 | INFO     | will attempt to kill all subprocesses of pid=26966
[2026-02-09 20:39:05] 2026-02-10 01:37:57,406 | INFO     | process IDs to be killed: [26966] (in reverse order)
[2026-02-09 20:39:05] 2026-02-10 01:37:57,471 | WARNING  | found no corresponding commands to process id(s)
[2026-02-09 20:39:05] 2026-02-10 01:37:57,471 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-09 20:39:05] 2026-02-10 01:37:57,476 | INFO     | did not find any defunct processes belonging to 26966
[2026-02-09 20:39:05] 2026-02-10 01:37:57,481 | INFO     | did not find any defunct processes belonging to 26966
[2026-02-09 20:39:05] 2026-02-10 01:37:57,481 | INFO     | ready for new job
[2026-02-09 20:39:05] 2026-02-10 01:37:57,481 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-09 20:39:05] 2026-02-10 01:37:57,483 | INFO     | **************************************
[2026-02-09 20:39:05] 2026-02-10 01:37:57,483 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-09 20:39:05] 2026-02-10 01:37:57,483 | INFO     | **************************************
[2026-02-09 20:39:05] 2026-02-10 01:37:57,484 | INFO     | 
[2026-02-09 20:39:05] 2026-02-10 01:37:57,485 | INFO     | architecture information:
[2026-02-09 20:39:05] 2026-02-10 01:37:57,485 | INFO     | executing command: cat /etc/os-release
[2026-02-09 20:39:05] 2026-02-10 01:37:57,508 | INFO     | cat /etc/os-release:
[2026-02-09 20:39:05] NAME="CentOS Linux"
[2026-02-09 20:39:05] VERSION="7 (Core)"
[2026-02-09 20:39:05] ID="centos"
[2026-02-09 20:39:05] ID_LIKE="rhel fedora"
[2026-02-09 20:39:05] VERSION_ID="7"
[2026-02-09 20:39:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-09 20:39:05] ANSI_COLOR="0;31"
[2026-02-09 20:39:05] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-09 20:39:05] HOME_URL="https://www.centos.org/"
[2026-02-09 20:39:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-09 20:39:05] 
[2026-02-09 20:39:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-09 20:39:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-09 20:39:05] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-09 20:39:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-09 20:39:05] 
[2026-02-09 20:39:05] 2026-02-10 01:37:57,508 | INFO     | **************************************
[2026-02-09 20:39:05] 2026-02-10 01:37:58,010 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-09 20:39:05] 2026-02-10 01:37:58,034 | INFO     | sufficient remaining disk space (25517096960 B)
[2026-02-09 20:39:05] 2026-02-10 01:37:58,035 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-09 20:39:05] 2026-02-10 01:37:58,035 | INFO     | current server update state: UPDATING_FINAL
[2026-02-09 20:39:05] 2026-02-10 01:37:58,035 | INFO     | update_server=False
[2026-02-09 20:39:05] 2026-02-10 01:37:58,035 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-09 20:39:05] 2026-02-10 01:37:58,036 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-09 20:39:05] 2026-02-10 01:37:58,036 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-09 20:39:05] 2026-02-10 01:37:58,036 | INFO     | aborting loop
[2026-02-09 20:39:05] 2026-02-10 01:37:58,045 | INFO     | all payload control threads have been joined
[2026-02-09 20:39:05] 2026-02-10 01:37:58,690 | INFO     | all data control threads have been joined
[2026-02-09 20:39:05] 2026-02-10 01:37:59,041 | INFO     | [job] job monitor thread has finished
[2026-02-09 20:39:05] 2026-02-10 01:37:59,041 | INFO     | [job] retrieve thread has finished
[2026-02-09 20:39:05] 2026-02-10 01:37:59,042 | INFO     | [job] queue monitor thread has finished
[2026-02-09 20:39:05] 2026-02-10 01:37:59,050 | INFO     | [payload] control thread has finished
[2026-02-09 20:39:05] 2026-02-10 01:37:59,105 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-09 20:39:05] 2026-02-10 01:37:59,129 | INFO     | [job] create_data_payload thread has finished
[2026-02-09 20:39:05] 2026-02-10 01:37:59,130 | INFO     | [data] copytool_in thread has finished
[2026-02-09 20:39:05] 2026-02-10 01:37:59,409 | INFO     | all job control threads have been joined
[2026-02-09 20:39:05] 2026-02-10 01:37:59,535 | INFO     | [payload] failed_post thread has finished
[2026-02-09 20:39:05] 2026-02-10 01:37:59,586 | INFO     | [payload] validate_pre thread has finished
[2026-02-09 20:39:05] 2026-02-10 01:37:59,695 | INFO     | [data] control thread has finished
[2026-02-09 20:39:05] 2026-02-10 01:37:59,744 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-09 20:39:05] 2026-02-10 01:37:59,807 | INFO     | [job] validate thread has finished
[2026-02-09 20:39:05] 2026-02-10 01:38:00,151 | INFO     | [payload] validate_post thread has finished
[2026-02-09 20:39:05] 2026-02-10 01:38:00,412 | INFO     | [job] control thread has finished
[2026-02-09 20:39:05] 2026-02-10 01:38:00,482 | INFO     | [payload] execute_payloads thread has finished
[2026-02-09 20:39:05] 2026-02-10 01:38:00,766 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-09 20:39:05] 2026-02-10 01:38:01,110 | INFO     | [data] copytool_out thread has finished
[2026-02-09 20:39:05] 2026-02-10 01:38:04,775 | INFO     | [data] queue_monitor thread has finished
[2026-02-09 20:39:05] 2026-02-10 01:38:28,794 | INFO     | PID=19953 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-09 20:39:05] 2026-02-10 01:38:28,794 | INFO     | .. there are 3 such processes running
[2026-02-09 20:39:05] 2026-02-10 01:38:28,795 | INFO     | found 0 job(s) in 20 queues
[2026-02-09 20:39:05] 2026-02-10 01:38:28,795 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-09 20:39:05] 2026-02-10 01:38:28,795 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-09 20:39:05] 2026-02-10 01:38:57,812 | INFO     | [monitor] cgroup control has ended
[2026-02-09 20:39:05] 2026-02-10 01:38:59,711 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140304626530112)>', '<ExcThread(monitor, started 140303730194176)>']
[2026-02-09 20:39:05] 2026-02-10 01:38:59,955 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-09 20:39:05] 2026-02-10 01:38:59,955 | INFO     | [monitor] control thread has ended
[2026-02-09 20:39:05] 2026-02-10 01:39:04,737 | INFO     | all workflow threads have been joined
[2026-02-09 20:39:05] 2026-02-10 01:39:04,737 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-09 20:39:05] 2026-02-10 01:39:04,737 | INFO     | traces error code: 0
[2026-02-09 20:39:05] 2026-02-10 01:39:04,738 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-09 20:39:05] 2026-02-10 01:39:04,853 [wrapper] ==== pilot stdout END ====
[2026-02-09 20:39:05] 2026-02-10 01:39:04,856 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-09 20:39:05] 2026-02-10 01:39:04,858 [wrapper] pilotpid: 19953
[2026-02-09 20:39:05] 2026-02-10 01:39:04,860 [wrapper] Pilot exit status: 0
[2026-02-09 20:39:05] 2026-02-10 01:39:04,869 [wrapper] pandaids: 6996985569 6996985569
[2026-02-09 20:39:05] 2026-02-10 01:39:04,902 [wrapper] cleanup supervisor_pilot  7778 19955
[2026-02-09 20:39:05] 2026-02-10 01:39:04,905 [wrapper] Test setup, not cleaning
[2026-02-09 20:39:05] 2026-02-10 01:39:04,907 [wrapper] apfmon messages muted
[2026-02-09 20:39:05] 2026-02-10 01:39:04,909 [wrapper] ==== wrapper stdout END ====
[2026-02-09 20:39:05] 2026-02-10 01:39:04,911 [wrapper] ==== wrapper stderr END ====
[2026-02-09 20:39:05]  *** Error codes and diagnostics ***
[2026-02-09 20:39:05]     "exeErrorCode": 0,
[2026-02-09 20:39:05]     "exeErrorDiag": "",
[2026-02-09 20:39:05]     "pilotErrorCode": 0,
[2026-02-09 20:39:05]     "pilotErrorDiag": "",
[2026-02-09 20:39:05]  *** Listing of results directory ***
[2026-02-09 20:39:05] total 1517004
[2026-02-09 20:39:05] drwx------ 5 boincer umatlas      4096 Jan 14 05:00 pilot3
[2026-02-09 20:39:05] -rw-r--r-- 1 boincer umatlas    584422 Feb  2 08:12 pilot3.tar.gz
[2026-02-09 20:39:05] -rwx------ 1 boincer umatlas     36322 Feb  2 08:15 runpilot2-wrapper.sh
[2026-02-09 20:39:05] -rw-r--r-- 1 boincer umatlas      5111 Feb  2 08:19 queuedata.json
[2026-02-09 20:39:05] -rw-r--r-- 1 boincer umatlas       100 Feb  9 14:06 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-09 20:39:05] -rwxr-xr-x 1 boincer umatlas      7986 Feb  9 14:06 run_atlas
[2026-02-09 20:39:05] -rw-r--r-- 1 boincer umatlas       105 Feb  9 14:06 job.xml
[2026-02-09 20:39:05] -rw-r--r-- 3 boincer umatlas 647599765 Feb  9 14:06 EVNT.48431078._000131.pool.root.1
[2026-02-09 20:39:05] -rw-r--r-- 3 boincer umatlas 647599765 Feb  9 14:06 ATLAS.root_0
[2026-02-09 20:39:05] -rw-r--r-- 2 boincer umatlas     15845 Feb  9 14:06 start_atlas.sh
[2026-02-09 20:39:05] drwxrwx--x 2 boincer umatlas      4096 Feb  9 14:06 shared
[2026-02-09 20:39:05] -rw-r--r-- 2 boincer umatlas    597766 Feb  9 14:06 input.tar.gz
[2026-02-09 20:39:05] -rw-r--r-- 1 boincer umatlas         0 Feb  9 14:06 boinc_lockfile
[2026-02-09 20:39:05] -rw-r--r-- 1 boincer umatlas      2559 Feb  9 16:48 pandaJob.out
[2026-02-09 20:39:05] -rw------- 1 boincer umatlas        57 Feb  9 16:48 setup.sh.local
[2026-02-09 20:39:05] -rw------- 1 boincer umatlas   1009488 Feb  9 16:48 agis_schedconf.cvmfs.json
[2026-02-09 20:39:05] -rw------- 1 boincer umatlas       435 Feb  9 16:48 workernode_map.json
[2026-02-09 20:39:05] -rw------- 1 boincer umatlas 249400854 Feb  9 20:37 HITS.48431080._006874.pool.root.1
[2026-02-09 20:39:05] -rw-r--r-- 1 boincer umatlas       532 Feb  9 20:37 boinc_task_state.xml
[2026-02-09 20:39:05] -rw------- 1 boincer umatlas      1047 Feb  9 20:37 memory_monitor_summary.json
[2026-02-09 20:39:05] -rw------- 1 boincer umatlas   1513144 Feb  9 20:37 agis_ddmendpoints.agis.ALL.json
[2026-02-09 20:39:05] -rw------- 1 boincer umatlas    497556 Feb  9 20:37 log.48431080._006874.job.log.tgz.1
[2026-02-09 20:39:05] -rw------- 1 boincer umatlas      6417 Feb  9 20:37 heartbeat.json
[2026-02-09 20:39:05] -rw------- 1 boincer umatlas        96 Feb  9 20:38 pilot_heartbeat.json
[2026-02-09 20:39:05] -rw-r--r-- 1 boincer umatlas      5952 Feb  9 20:38 init_data.xml
[2026-02-09 20:39:05] -rw-r--r-- 1 boincer umatlas      8192 Feb  9 20:38 boinc_mmap_file
[2026-02-09 20:39:05] -rw-r--r-- 1 boincer umatlas        29 Feb  9 20:38 wrapper_checkpoint.txt
[2026-02-09 20:39:05] -rw------- 1 boincer umatlas      4817 Feb  9 20:39 pilotlog.txt
[2026-02-09 20:39:05] -rw------- 1 boincer umatlas   1930556 Feb  9 20:39 log.48431080._006874.job.log.1
[2026-02-09 20:39:05] -rw------- 1 boincer umatlas       357 Feb  9 20:39 output.list
[2026-02-09 20:39:05] -rw-r--r-- 1 boincer umatlas       620 Feb  9 20:39 runtime_log
[2026-02-09 20:39:05] -rw------- 1 boincer umatlas   2447360 Feb  9 20:39 result.tar.gz
[2026-02-09 20:39:05] -rw-r--r-- 1 boincer umatlas      9427 Feb  9 20:39 runtime_log.err
[2026-02-09 20:39:05] -rw------- 1 boincer umatlas       788 Feb  9 20:39 3PgLDmUx868n9Rq4apOajLDm4fhM0noT9bVooX4SDmgWSKDmltVitn.diag
[2026-02-09 20:39:05] -rw-r--r-- 1 boincer umatlas     23183 Feb  9 20:39 stderr.txt
[2026-02-09 20:39:05] HITS file was successfully produced:
[2026-02-09 20:39:05] -rw------- 1 boincer umatlas 249400854 Feb  9 20:37 shared/HITS.pool.root.1
[2026-02-09 20:39:05]  *** Contents of shared directory: ***
[2026-02-09 20:39:05] total 878980
[2026-02-09 20:39:05] -rw-r--r-- 3 boincer umatlas 647599765 Feb  9 14:06 ATLAS.root_0
[2026-02-09 20:39:05] -rw-r--r-- 2 boincer umatlas     15845 Feb  9 14:06 start_atlas.sh
[2026-02-09 20:39:05] -rw-r--r-- 2 boincer umatlas    597766 Feb  9 14:06 input.tar.gz
[2026-02-09 20:39:05] -rw------- 1 boincer umatlas 249400854 Feb  9 20:37 HITS.pool.root.1
[2026-02-09 20:39:05] -rw------- 1 boincer umatlas   2447360 Feb  9 20:39 result.tar.gz
20:39:06 (8435): run_atlas exited; CPU time 105194.923316
20:39:06 (8435): called boinc_finish(0)

</stderr_txt>
]]>

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