Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
09:04:33 (665581): wrapper (7.7.26015): starting
09:04:33 (665581): wrapper: running run_atlas (--nthreads 3)
[2026-02-10 09:04:33] Arguments: --nthreads 3
[2026-02-10 09:04:33] Threads: 3
[2026-02-10 09:04:33] Checking for CVMFS
[2026-02-10 09:04:33] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-10 09:04:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-10 09:04:33] Running cvmfs_config stat atlas.cern.ch
[2026-02-10 09:04:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-10 09:04:33] 2.9.2.0 4008882 5825 83236 156081 3 50 36551340 36864000 0 130560 0 2410534 99.983 208803 5160 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-10 09:04:33] CVMFS is ok
[2026-02-10 09:04:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-10 09:04:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-10 09:04:33] Further information can be found at the LHC@home message board.
[2026-02-10 09:04:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-10 09:04:33] Checking for apptainer binary...
[2026-02-10 09:04:33] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-10 09:04:33] Running /usr/bin/apptainer --version
[2026-02-10 09:04:33] apptainer version 1.4.1-1.1
[2026-02-10 09:04:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-10 09:04:33] belleA263b
[2026-02-10 09:04:33] apptainer works
[2026-02-10 09:04:33] Set ATHENA_PROC_NUMBER=3
[2026-02-10 09:04:33] Set ATHENA_CORE_NUMBER=3
[2026-02-10 09:04:33] Starting ATLAS job with PandaID=7006309601
[2026-02-10 09:04:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-10 10:30:04]  *** The last 200 lines of the pilot log: ***
[2026-02-10 10:30:04]  is_altstaged=None
[2026-02-10 10:30:04]  is_tar=False
[2026-02-10 10:30:04]  lfn=log.48318018._006035.job.log.tgz.1
[2026-02-10 10:30:04]  mtime=0
[2026-02-10 10:30:04]  protocol_id=None
[2026-02-10 10:30:04]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-10 10:30:04]  replicas=None
[2026-02-10 10:30:04]  scope=mc23_13p6TeV
[2026-02-10 10:30:04]  status=None
[2026-02-10 10:30:04]  status_code=0
[2026-02-10 10:30:04]  storage_token=
[2026-02-10 10:30:04]  surl=/local/data/boinc/slots/0/PanDA_Pilot-7006309601/log.48318018._006035.job.log.tgz.1
[2026-02-10 10:30:04]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a9/00/log.48318018._006035.job.log.tgz.1
[2026-02-10 10:30:04]  workdir=None
[2026-02-10 10:30:04] ]
[2026-02-10 10:30:04] 2026-02-10 09:29:28,565 | INFO     | transferring file log.48318018._006035.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-7006309601/log.48318018._006035.job.log.tgz.1 to /local/data/boinc/
[2026-02-10 10:30:04] 2026-02-10 09:29:28,565 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-7006309601/log.48318018._006035.job.log.tgz.1 /local/data/boinc/slots/0/log.48318018._0060
[2026-02-10 10:30:04] 2026-02-10 09:29:28,578 | INFO     | adding to output.list: log.48318018._006035.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a9/00/log.48318018._006035.job.log.tg
[2026-02-10 10:30:04] 2026-02-10 09:29:28,578 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-10 10:30:04] 2026-02-10 09:29:28,578 | INFO     | summary of transferred files:
[2026-02-10 10:30:04] 2026-02-10 09:29:28,578 | INFO     |  -- lfn=log.48318018._006035.job.log.tgz.1, status_code=0, status=transferred
[2026-02-10 10:30:04] 2026-02-10 09:29:28,579 | INFO     | stage-out finished correctly
[2026-02-10 10:30:04] 2026-02-10 09:29:29,404 | INFO     | time since job start (5085s) is within the limit (349056.0s)
[2026-02-10 10:30:04] 2026-02-10 09:29:30,096 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-10 10:30:04] 2026-02-10 09:29:30,253 | INFO     | monitor loop #393: job 0:7006309601 is in state 'finished'
[2026-02-10 10:30:04] 2026-02-10 09:29:30,253 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-10 10:30:04] 2026-02-10 09:29:30,469 | INFO     | PID=669625 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-10 10:30:04] 2026-02-10 09:29:31,470 | INFO     | time since job start (5087s) is within the limit (349056.0s)
[2026-02-10 10:30:04] 2026-02-10 09:29:32,757 | INFO     | monitor loop #394: job 0:7006309601 is in state 'finished'
[2026-02-10 10:30:04] 2026-02-10 09:29:32,758 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-10 10:30:04] 2026-02-10 09:29:33,014 | INFO     | job 7006309601 has state=finished
[2026-02-10 10:30:04] 2026-02-10 09:29:33,015 | INFO     | preparing for final server update for job 7006309601 in state='finished'
[2026-02-10 10:30:04] 2026-02-10 09:29:33,015 | INFO     | reading metadata from: /local/data/boinc/slots/0/PanDA_Pilot-7006309601/jobReport.json
[2026-02-10 10:30:04] 2026-02-10 09:29:33,016 | INFO     | added worker_node to metadata from /local/data/boinc/slots/0/workernode_map.json
[2026-02-10 10:30:04] 2026-02-10 09:29:33,016 | INFO     | this job has now completed (state=finished)
[2026-02-10 10:30:04] 2026-02-10 09:29:33,016 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-10 10:30:04] 2026-02-10 09:29:33,016 | INFO     | log transfer has been attempted: DONE
[2026-02-10 10:30:04] 2026-02-10 09:29:33,016 | INFO     | job 7006309601 has finished - writing final server update
[2026-02-10 10:30:04] 2026-02-10 09:29:33,016 | INFO     | total number of processed events: 400 (read)
[2026-02-10 10:30:04] 2026-02-10 09:29:33,018 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-7006309601/memory_monitor_summary.json (trf name=prmon)
[2026-02-10 10:30:04] 2026-02-10 09:29:33,018 | INFO     | extracted standard info from prmon json
[2026-02-10 10:30:04] 2026-02-10 09:29:33,018 | INFO     | extracted standard memory fields from prmon json
[2026-02-10 10:30:04] 2026-02-10 09:29:33,018 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-10 10:30:04] 2026-02-10 09:29:33,018 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-10 10:30:04] 2026-02-10 09:29:33,018 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-10 10:30:04] 2026-02-10 09:29:33,019 | INFO     | fitting pss+swap vs Time
[2026-02-10 10:30:04] 2026-02-10 09:29:33,019 | INFO     | sum of square deviations: 141539398.0
[2026-02-10 10:30:04] 2026-02-10 09:29:33,019 | INFO     | sum of deviations: -4588846817.0
[2026-02-10 10:30:04] 2026-02-10 09:29:33,019 | INFO     | mean x: 1770713324.0
[2026-02-10 10:30:04] 2026-02-10 09:29:33,020 | INFO     | mean y: 2388379.4675324676
[2026-02-10 10:30:04] 2026-02-10 09:29:33,020 | INFO     | intersect: 57410659966.555176
[2026-02-10 10:30:04] 2026-02-10 09:29:33,020 | INFO     | chi2: 0.1277804278180709
[2026-02-10 10:30:04] 2026-02-10 09:29:33,020 | INFO     | current memory leak: -32.42 B/s (using 77 data points, chi2=0.13)
[2026-02-10 10:30:04] 2026-02-10 09:29:33,020 | INFO     | could have reported an average CPU frequency of 3575 MHz (6 samples)
[2026-02-10 10:30:04] 2026-02-10 09:29:33,020 | INFO     | ..............................
[2026-02-10 10:30:04] 2026-02-10 09:29:33,020 | INFO     | . Timing measurements:
[2026-02-10 10:30:04] 2026-02-10 09:29:33,020 | INFO     | . get job = 0 s
[2026-02-10 10:30:04] 2026-02-10 09:29:33,020 | INFO     | . initial setup = 3 s
[2026-02-10 10:30:04] 2026-02-10 09:29:33,020 | INFO     | . payload setup = 3 s
[2026-02-10 10:30:04] 2026-02-10 09:29:33,020 | INFO     | . stage-in = 0 s
[2026-02-10 10:30:04] 2026-02-10 09:29:33,020 | INFO     | . payload execution = 5066 s
[2026-02-10 10:30:04] 2026-02-10 09:29:33,020 | INFO     | . stage-out = 0 s
[2026-02-10 10:30:04] 2026-02-10 09:29:33,020 | INFO     | . log creation = 0 s
[2026-02-10 10:30:04] 2026-02-10 09:29:33,020 | INFO     | ..............................
[2026-02-10 10:30:04] 2026-02-10 09:29:33,050 | INFO     | 
[2026-02-10 10:30:04] 2026-02-10 09:29:33,050 | INFO     | job summary report
[2026-02-10 10:30:04] 2026-02-10 09:29:33,050 | INFO     | --------------------------------------------------
[2026-02-10 10:30:04] 2026-02-10 09:29:33,050 | INFO     | PanDA job id: 7006309601
[2026-02-10 10:30:04] 2026-02-10 09:29:33,050 | INFO     | task id: 48318018
[2026-02-10 10:30:04] 2026-02-10 09:29:33,050 | INFO     | errors: (none)
[2026-02-10 10:30:04] 2026-02-10 09:29:33,050 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-10 10:30:04] 2026-02-10 09:29:33,050 | INFO     | pilot state: finished 
[2026-02-10 10:30:04] 2026-02-10 09:29:33,050 | INFO     | transexitcode: 0
[2026-02-10 10:30:04] 2026-02-10 09:29:33,050 | INFO     | exeerrorcode: 0
[2026-02-10 10:30:04] 2026-02-10 09:29:33,050 | INFO     | exeerrordiag: 
[2026-02-10 10:30:04] 2026-02-10 09:29:33,050 | INFO     | exitcode: 0
[2026-02-10 10:30:04] 2026-02-10 09:29:33,050 | INFO     | exitmsg: OK
[2026-02-10 10:30:04] 2026-02-10 09:29:33,050 | INFO     | cpuconsumptiontime: 14494 s
[2026-02-10 10:30:04] 2026-02-10 09:29:33,050 | INFO     | nevents: 400
[2026-02-10 10:30:04] 2026-02-10 09:29:33,050 | INFO     | neventsw: 0
[2026-02-10 10:30:04] 2026-02-10 09:29:33,050 | INFO     | pid: 674056
[2026-02-10 10:30:04] 2026-02-10 09:29:33,050 | INFO     | pgrp: 674056
[2026-02-10 10:30:04] 2026-02-10 09:29:33,051 | INFO     | corecount: 3
[2026-02-10 10:30:04] 2026-02-10 09:29:33,051 | INFO     | event service: False
[2026-02-10 10:30:04] 2026-02-10 09:29:33,051 | INFO     | sizes: {0: 2283090, 11: 2283090, 5073: 2318500, 5075: 2318500, 5078: 2318694}
[2026-02-10 10:30:04] 2026-02-10 09:29:33,051 | INFO     | --------------------------------------------------
[2026-02-10 10:30:04] 2026-02-10 09:29:33,051 | INFO     | 
[2026-02-10 10:30:04] 2026-02-10 09:29:33,051 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-02-10 10:30:04] 2026-02-10 09:29:33,063 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-10 10:30:04] 2026-02-10 09:29:33,063 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-10 10:30:04] 2026-02-10 09:29:33,063 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-10 10:30:04] 2026-02-10 09:29:33,063 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-10 10:30:04] 2026-02-10 09:29:33,064 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-10 10:30:04] 2026-02-10 09:29:33,064 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-10 10:30:04] 2026-02-10 09:29:33,064 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-10 10:30:04] 2026-02-10 09:29:33,064 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-10 10:30:04] 2026-02-10 09:29:33,064 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-10 10:30:04] 2026-02-10 09:29:33,064 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-10 10:30:04] 2026-02-10 09:29:33,064 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-10 10:30:04] 2026-02-10 09:29:33,064 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-10 10:30:04] 2026-02-10 09:29:33,064 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-10 10:30:04] 2026-02-10 09:29:33,064 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-10 10:30:04] 2026-02-10 09:29:33,064 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-10 10:30:04] 2026-02-10 09:29:33,064 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-10 10:30:04] 2026-02-10 09:29:33,064 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-10 10:30:04] 2026-02-10 09:29:33,064 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-10 10:30:04] 2026-02-10 09:29:33,064 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-10 10:30:04] 2026-02-10 09:29:33,064 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-10 10:30:04] 2026-02-10 09:29:33,064 | INFO     | job 7006309601 has completed (purged errors)
[2026-02-10 10:30:04] 2026-02-10 09:29:33,064 | INFO     | overall cleanup function is called
[2026-02-10 10:30:04] 2026-02-10 09:29:34,071 | INFO     | --- collectZombieJob: --- 10, [674056]
[2026-02-10 10:30:04] 2026-02-10 09:29:34,071 | INFO     | zombie collector waiting for pid 674056
[2026-02-10 10:30:04] 2026-02-10 09:29:34,071 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-10 10:30:04] 2026-02-10 09:29:34,071 | INFO     | collected zombie processes
[2026-02-10 10:30:04] 2026-02-10 09:29:34,071 | INFO     | will attempt to kill all subprocesses of pid=674056
[2026-02-10 10:30:04] 2026-02-10 09:29:34,118 | INFO     | process IDs to be killed: [674056] (in reverse order)
[2026-02-10 10:30:04] 2026-02-10 09:29:34,145 | WARNING  | found no corresponding commands to process id(s)
[2026-02-10 10:30:04] 2026-02-10 09:29:34,145 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-10 10:30:04] 2026-02-10 09:29:34,146 | INFO     | did not find any defunct processes belonging to 674056
[2026-02-10 10:30:04] 2026-02-10 09:29:34,148 | INFO     | did not find any defunct processes belonging to 674056
[2026-02-10 10:30:04] 2026-02-10 09:29:34,148 | INFO     | ready for new job
[2026-02-10 10:30:04] 2026-02-10 09:29:34,148 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-10 10:30:04] 2026-02-10 09:29:34,148 | INFO     | **************************************
[2026-02-10 10:30:04] 2026-02-10 09:29:34,149 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-10 10:30:04] 2026-02-10 09:29:34,149 | INFO     | **************************************
[2026-02-10 10:30:04] 2026-02-10 09:29:34,149 | INFO     | 
[2026-02-10 10:30:04] 2026-02-10 09:29:34,149 | INFO     | architecture information:
[2026-02-10 10:30:04] 2026-02-10 09:29:34,149 | INFO     | executing command: cat /etc/os-release
[2026-02-10 10:30:04] 2026-02-10 09:29:34,158 | INFO     | cat /etc/os-release:
[2026-02-10 10:30:04] NAME="CentOS Linux"
[2026-02-10 10:30:04] VERSION="7 (Core)"
[2026-02-10 10:30:04] ID="centos"
[2026-02-10 10:30:04] ID_LIKE="rhel fedora"
[2026-02-10 10:30:04] VERSION_ID="7"
[2026-02-10 10:30:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-10 10:30:04] ANSI_COLOR="0;31"
[2026-02-10 10:30:04] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-10 10:30:04] HOME_URL="https://www.centos.org/"
[2026-02-10 10:30:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-10 10:30:04] 
[2026-02-10 10:30:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-10 10:30:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-10 10:30:04] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-10 10:30:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-10 10:30:04] 
[2026-02-10 10:30:04] 2026-02-10 09:29:34,159 | INFO     | **************************************
[2026-02-10 10:30:04] 2026-02-10 09:29:34,662 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-10 10:30:04] 2026-02-10 09:29:34,675 | INFO     | sufficient remaining disk space (364125356032 B)
[2026-02-10 10:30:04] 2026-02-10 09:29:34,675 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-10 10:30:04] 2026-02-10 09:29:34,675 | INFO     | current server update state: UPDATING_FINAL
[2026-02-10 10:30:04] 2026-02-10 09:29:34,675 | INFO     | update_server=False
[2026-02-10 10:30:04] 2026-02-10 09:29:34,675 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-10 10:30:04] 2026-02-10 09:29:34,676 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-10 10:30:04] 2026-02-10 09:29:34,676 | INFO     | aborting loop
[2026-02-10 10:30:04] 2026-02-10 09:29:34,676 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-10 10:30:04] 2026-02-10 09:29:34,676 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-10 10:30:04] 2026-02-10 09:29:34,897 | INFO     | all payload control threads have been joined
[2026-02-10 10:30:04] 2026-02-10 09:29:35,339 | INFO     | all data control threads have been joined
[2026-02-10 10:30:04] 2026-02-10 09:29:35,642 | INFO     | all job control threads have been joined
[2026-02-10 10:30:04] 2026-02-10 09:29:35,681 | INFO     | [job] job monitor thread has finished
[2026-02-10 10:30:04] 2026-02-10 09:29:35,681 | INFO     | [job] retrieve thread has finished
[2026-02-10 10:30:04] 2026-02-10 09:29:35,682 | INFO     | [job] queue monitor thread has finished
[2026-02-10 10:30:04] 2026-02-10 09:29:35,711 | INFO     | [payload] validate_post thread has finished
[2026-02-10 10:30:04] 2026-02-10 09:29:35,902 | INFO     | [payload] control thread has finished
[2026-02-10 10:30:04] 2026-02-10 09:29:36,135 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-10 10:30:04] 2026-02-10 09:29:36,213 | INFO     | [job] validate thread has finished
[2026-02-10 10:30:04] 2026-02-10 09:29:36,291 | INFO     | [job] create_data_payload thread has finished
[2026-02-10 10:30:04] 2026-02-10 09:29:36,323 | INFO     | [payload] failed_post thread has finished
[2026-02-10 10:30:04] 2026-02-10 09:29:36,335 | INFO     | [payload] validate_pre thread has finished
[2026-02-10 10:30:04] 2026-02-10 09:29:36,345 | INFO     | [data] control thread has finished
[2026-02-10 10:30:04] 2026-02-10 09:29:36,450 | INFO     | [data] copytool_in thread has finished
[2026-02-10 10:30:04] 2026-02-10 09:29:36,648 | INFO     | [job] control thread has finished
[2026-02-10 10:30:04] 2026-02-10 09:29:36,682 | INFO     | [data] copytool_out thread has finished
[2026-02-10 10:30:04] 2026-02-10 09:29:36,789 | INFO     | [payload] execute_payloads thread has finished
[2026-02-10 10:30:04] 2026-02-10 09:29:40,142 | INFO     | [data] queue_monitor thread has finished
[2026-02-10 10:30:04] 2026-02-10 09:29:45,673 | INFO     | job.realtimelogging is not enabled
[2026-02-10 10:30:04] 2026-02-10 09:29:46,679 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-10 10:30:04] 2026-02-10 09:29:50,407 | INFO     | [monitor] cgroup control has ended
[2026-02-10 10:30:04] 2026-02-10 09:29:51,699 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140305524873024)>', '<ExcThread(monitor, started 140305251976960)>']
[2026-02-10 10:30:04] 2026-02-10 09:29:56,706 | INFO     | all workflow threads have been joined
[2026-02-10 10:30:04] 2026-02-10 09:29:56,707 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-10 10:30:04] 2026-02-10 09:29:56,707 | INFO     | traces error code: 0
[2026-02-10 10:30:04] 2026-02-10 09:29:56,707 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-10 10:30:04] 2026-02-10 09:30:04,607 | INFO     | PID=669625 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-10 10:30:04] 2026-02-10 09:30:04,607 | INFO     | found 0 job(s) in 20 queues
[2026-02-10 10:30:04] 2026-02-10 09:30:04,607 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-10 10:30:04] 2026-02-10 09:30:04,607 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-10 10:30:04] 2026-02-10 09:30:04,607 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-10 10:30:04] 2026-02-10 09:30:04,608 | CRITICAL | thread 'MainThread' is not alive
[2026-02-10 10:30:04] 2026-02-10 09:30:04,608 | INFO     | [monitor] control thread has ended
[2026-02-10 10:30:04] 2026-02-10 09:30:04,658 [wrapper] ==== pilot stdout END ====
[2026-02-10 10:30:04] 2026-02-10 09:30:04,661 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-10 10:30:04] 2026-02-10 09:30:04,664 [wrapper] pilotpid: 669625
[2026-02-10 10:30:04] 2026-02-10 09:30:04,666 [wrapper] Pilot exit status: 0
[2026-02-10 10:30:04] 2026-02-10 09:30:04,674 [wrapper] pandaids: 7006309601
[2026-02-10 10:30:04] 2026-02-10 09:30:04,692 [wrapper] cleanup supervisor_pilot  679214 669626
[2026-02-10 10:30:04] 2026-02-10 09:30:04,694 [wrapper] Test setup, not cleaning
[2026-02-10 10:30:04] 2026-02-10 09:30:04,697 [wrapper] apfmon messages muted
[2026-02-10 10:30:04] 2026-02-10 09:30:04,699 [wrapper] ==== wrapper stdout END ====
[2026-02-10 10:30:04] 2026-02-10 09:30:04,702 [wrapper] ==== wrapper stderr END ====
[2026-02-10 10:30:04]  *** Error codes and diagnostics ***
[2026-02-10 10:30:04]     "exeErrorCode": 0,
[2026-02-10 10:30:04]     "exeErrorDiag": "",
[2026-02-10 10:30:04]     "pilotErrorCode": 0,
[2026-02-10 10:30:04]     "pilotErrorDiag": "",
[2026-02-10 10:30:04]  *** Listing of results directory ***
[2026-02-10 10:30:04] total 672304
[2026-02-10 10:30:04] -rw-r--r-- 1 boinc boinc    584627 Feb  9 14:19 pilot3.tar.gz
[2026-02-10 10:30:04] -rwx------ 1 boinc boinc     36322 Feb  9 14:20 runpilot2-wrapper.sh
[2026-02-10 10:30:04] -rw-r--r-- 1 boinc boinc      5111 Feb  9 14:21 queuedata.json
[2026-02-10 10:30:04] -rw-r--r-- 1 boinc boinc       100 Feb 10 09:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-10 10:30:04] -rwxr-xr-x 1 boinc boinc      7986 Feb 10 09:04 run_atlas
[2026-02-10 10:30:04] -rw-r--r-- 1 boinc boinc       105 Feb 10 09:04 job.xml
[2026-02-10 10:30:04] -rw-r--r-- 2 boinc boinc 496550841 Feb 10 09:04 EVNT.48318016._000118.pool.root.1
[2026-02-10 10:30:04] -rw-r--r-- 2 boinc boinc    597942 Feb 10 09:04 input.tar.gz
[2026-02-10 10:30:04] -rw-r--r-- 2 boinc boinc     15845 Feb 10 09:04 start_atlas.sh
[2026-02-10 10:30:04] drwxrwx--x 2 boinc boinc      4096 Feb 10 09:04 shared
[2026-02-10 10:30:04] -rw-r--r-- 1 boinc boinc         0 Feb 10 09:04 boinc_setup_complete
[2026-02-10 10:30:04] -rw-r--r-- 1 boinc boinc      6449 Feb 10 09:04 init_data.xml
[2026-02-10 10:30:04] -rw-r--r-- 1 boinc boinc         0 Feb 10 09:04 boinc_lockfile
[2026-02-10 10:30:04] -rw-r--r-- 1 boinc boinc      2521 Feb 10 09:04 pandaJob.out
[2026-02-10 10:30:04] -rw------- 1 boinc boinc   1009496 Feb 10 09:04 agis_schedconf.cvmfs.json
[2026-02-10 10:30:04] -rw------- 1 boinc boinc   1513144 Feb 10 09:04 agis_ddmendpoints.agis.ALL.json
[2026-02-10 10:30:04] -rw------- 1 boinc boinc       427 Feb 10 09:04 workernode_map.json
[2026-02-10 10:30:04] drwx------ 5 boinc boinc      4096 Feb 10 09:04 pilot3
[2026-02-10 10:30:04] -rw------- 1 boinc boinc        95 Feb 10 10:29 pilot_heartbeat.json
[2026-02-10 10:30:04] -rw------- 1 boinc boinc 185894605 Feb 10 10:29 HITS.48318018._006035.pool.root.1
[2026-02-10 10:30:04] -rw-r--r-- 1 boinc boinc       530 Feb 10 10:29 boinc_task_state.xml
[2026-02-10 10:30:04] -rw------- 1 boinc boinc      1012 Feb 10 10:29 memory_monitor_summary.json
[2026-02-10 10:30:04] -rw------- 1 boinc boinc    285659 Feb 10 10:29 log.48318018._006035.job.log.tgz.1
[2026-02-10 10:30:04] -rw------- 1 boinc boinc      6303 Feb 10 10:29 heartbeat.json
[2026-02-10 10:30:04] -rw-r--r-- 1 boinc boinc        27 Feb 10 10:30 wrapper_checkpoint.txt
[2026-02-10 10:30:04] -rw-r--r-- 1 boinc boinc      8192 Feb 10 10:30 boinc_mmap_file
[2026-02-10 10:30:04] -rw------- 1 boinc boinc       816 Feb 10 10:30 pilotlog.txt
[2026-02-10 10:30:04] -rw------- 1 boinc boinc    743451 Feb 10 10:30 log.48318018._006035.job.log.1
[2026-02-10 10:30:04] -rw------- 1 boinc boinc       357 Feb 10 10:30 output.list
[2026-02-10 10:30:04] -rw-r--r-- 1 boinc boinc       620 Feb 10 10:30 runtime_log
[2026-02-10 10:30:04] -rw------- 1 boinc boinc   1044480 Feb 10 10:30 result.tar.gz
[2026-02-10 10:30:04] -rw-r--r-- 1 boinc boinc      8916 Feb 10 10:30 runtime_log.err
[2026-02-10 10:30:04] -rw------- 1 boinc boinc       661 Feb 10 10:30 DnLLDmvMg98n9Rq4apOajLDm4fhM0noT9bVooX4SDmxJfKDmSgnRVn.diag
[2026-02-10 10:30:04] -rw-r--r-- 1 boinc boinc     21530 Feb 10 10:30 stderr.txt
[2026-02-10 10:30:04] HITS file was successfully produced:
[2026-02-10 10:30:04] -rw------- 1 boinc boinc 185894605 Feb 10 10:29 shared/HITS.pool.root.1
[2026-02-10 10:30:04]  *** Contents of shared directory: ***
[2026-02-10 10:30:04] total 668084
[2026-02-10 10:30:04] -rw-r--r-- 2 boinc boinc 496550841 Feb 10 09:04 ATLAS.root_0
[2026-02-10 10:30:04] -rw-r--r-- 2 boinc boinc    597942 Feb 10 09:04 input.tar.gz
[2026-02-10 10:30:04] -rw-r--r-- 2 boinc boinc     15845 Feb 10 09:04 start_atlas.sh
[2026-02-10 10:30:04] -rw------- 1 boinc boinc 185894605 Feb 10 10:29 HITS.pool.root.1
[2026-02-10 10:30:04] -rw------- 1 boinc boinc   1044480 Feb 10 10:30 result.tar.gz
10:30:05 (665581): run_atlas exited; CPU time 14520.783936
10:30:05 (665581): called boinc_finish(0)

</stderr_txt>
]]>

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