Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:47:13 (3424968): wrapper (7.7.26015): starting
11:47:13 (3424968): wrapper: running run_atlas (--nthreads 8)
[2026-02-09 11:47:13] Arguments: --nthreads 8
[2026-02-09 11:47:13] Threads: 8
[2026-02-09 11:47:13] Checking for CVMFS
[2026-02-09 11:47:14] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-09 11:47:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-09 11:47:14] Running cvmfs_config stat atlas.cern.ch
[2026-02-09 11:47:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-09 11:47:15] 2.13.3.0 14106 138260 247408 156059 2 544 39958941 40960000 62323 16776704 0 1550150120 99.731 1108656744 48319 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-02-09 11:47:15] CVMFS is ok
[2026-02-09 11:47:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-09 11:47:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-09 11:47:15] Further information can be found at the LHC@home message board.
[2026-02-09 11:47:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-09 11:47:15] Checking for apptainer binary...
[2026-02-09 11:47:15] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-09 11:47:15] Running /usr/bin/apptainer --version
[2026-02-09 11:47:15] apptainer version 1.4.5-2.el9
[2026-02-09 11:47:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-09 11:47:16] c8-7-5.aglt2.org
[2026-02-09 11:47:16] apptainer works
[2026-02-09 11:47:16] Set ATHENA_PROC_NUMBER=8
[2026-02-09 11:47:16] Set ATHENA_CORE_NUMBER=8
[2026-02-09 11:47:16] Starting ATLAS job with PandaID=7006308452
[2026-02-09 11:47:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-09 13:01:02]  *** The last 200 lines of the pilot log: ***
[2026-02-09 13:01:02]  guid=46d67001-79ae-4308-af28-90e4c223c7d5
[2026-02-09 13:01:02]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-09 13:01:02]  is_altstaged=None
[2026-02-09 13:01:02]  is_tar=False
[2026-02-09 13:01:02]  lfn=log.48318018._005496.job.log.tgz.1
[2026-02-09 13:01:02]  mtime=0
[2026-02-09 13:01:02]  protocol_id=None
[2026-02-09 13:01:02]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-09 13:01:02]  replicas=None
[2026-02-09 13:01:02]  scope=mc23_13p6TeV
[2026-02-09 13:01:02]  status=None
[2026-02-09 13:01:02]  status_code=0
[2026-02-09 13:01:02]  storage_token=
[2026-02-09 13:01:02]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7006308452/log.48318018._005496.job.log.tgz.1
[2026-02-09 13:01:02]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e4/40/log.48318018._005496.job.log.tgz.1
[2026-02-09 13:01:02]  workdir=None
[2026-02-09 13:01:02] ]
[2026-02-09 13:01:02] 2026-02-09 18:00:26,995 | INFO     | transferring file log.48318018._005496.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7006308452/log.48318018._005496.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-02-09 13:01:02] 2026-02-09 18:00:26,995 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7006308452/log.48318018._005496.job.log.tgz.1 /tmp/boinchome/slots/0/log.48318018._005496.job
[2026-02-09 13:01:02] 2026-02-09 18:00:27,048 | INFO     | adding to output.list: log.48318018._005496.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e4/40/log.48318018._005496.job.log.tg
[2026-02-09 13:01:02] 2026-02-09 18:00:27,049 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-09 13:01:02] 2026-02-09 18:00:27,049 | INFO     | summary of transferred files:
[2026-02-09 13:01:02] 2026-02-09 18:00:27,049 | INFO     |  -- lfn=log.48318018._005496.job.log.tgz.1, status_code=0, status=transferred
[2026-02-09 13:01:02] 2026-02-09 18:00:27,049 | INFO     | stage-out finished correctly
[2026-02-09 13:01:02] 2026-02-09 18:00:28,416 | INFO     | time since job start (4242s) is within the limit (349056.0s)
[2026-02-09 13:01:02] 2026-02-09 18:00:28,650 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-09 13:01:02] 2026-02-09 18:00:28,985 | INFO     | job 7006308452 has state=finished
[2026-02-09 13:01:02] 2026-02-09 18:00:28,985 | INFO     | preparing for final server update for job 7006308452 in state='finished'
[2026-02-09 13:01:02] 2026-02-09 18:00:28,985 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7006308452/jobReport.json
[2026-02-09 13:01:02] 2026-02-09 18:00:28,986 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-02-09 13:01:02] 2026-02-09 18:00:28,987 | INFO     | this job has now completed (state=finished)
[2026-02-09 13:01:02] 2026-02-09 18:00:28,987 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-09 13:01:02] 2026-02-09 18:00:28,987 | INFO     | log transfer has been attempted: DONE
[2026-02-09 13:01:02] 2026-02-09 18:00:28,987 | INFO     | job 7006308452 has finished - writing final server update
[2026-02-09 13:01:02] 2026-02-09 18:00:28,987 | INFO     | total number of processed events: 400 (read)
[2026-02-09 13:01:02] 2026-02-09 18:00:29,047 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7006308452/memory_monitor_summary.json (trf name=prmon)
[2026-02-09 13:01:02] 2026-02-09 18:00:29,048 | INFO     | extracted standard info from prmon json
[2026-02-09 13:01:02] 2026-02-09 18:00:29,048 | INFO     | extracted standard memory fields from prmon json
[2026-02-09 13:01:02] 2026-02-09 18:00:29,048 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-09 13:01:02] 2026-02-09 18:00:29,048 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-09 13:01:02] 2026-02-09 18:00:29,048 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-09 13:01:02] 2026-02-09 18:00:29,066 | INFO     | fitting pss+swap vs Time
[2026-02-09 13:01:02] 2026-02-09 18:00:29,066 | INFO     | sum of square deviations: 70359841.93442622
[2026-02-09 13:01:02] 2026-02-09 18:00:29,067 | INFO     | sum of deviations: -4446322942.754097
[2026-02-09 13:01:02] 2026-02-09 18:00:29,067 | INFO     | mean x: 1770658043.0327868
[2026-02-09 13:01:02] 2026-02-09 18:00:29,067 | INFO     | mean y: 2582908.37704918
[2026-02-09 13:01:02] 2026-02-09 18:00:29,067 | INFO     | intersect: 111897625080.958
[2026-02-09 13:01:02] 2026-02-09 18:00:29,067 | INFO     | chi2: 0.1435586853913466
[2026-02-09 13:01:02] 2026-02-09 18:00:29,067 | INFO     | current memory leak: -63.19 B/s (using 61 data points, chi2=0.14)
[2026-02-09 13:01:02] 2026-02-09 18:00:29,067 | INFO     | could have reported an average CPU frequency of 3799 MHz (6 samples)
[2026-02-09 13:01:02] 2026-02-09 18:00:29,067 | INFO     | ..............................
[2026-02-09 13:01:02] 2026-02-09 18:00:29,068 | INFO     | . Timing measurements:
[2026-02-09 13:01:02] 2026-02-09 18:00:29,068 | INFO     | . get job = 0 s
[2026-02-09 13:01:02] 2026-02-09 18:00:29,068 | INFO     | . initial setup = 61 s
[2026-02-09 13:01:02] 2026-02-09 18:00:29,068 | INFO     | . payload setup = 73 s
[2026-02-09 13:01:02] 2026-02-09 18:00:29,068 | INFO     | . stage-in = 0 s
[2026-02-09 13:01:02] 2026-02-09 18:00:29,068 | INFO     | . payload execution = 4148 s
[2026-02-09 13:01:02] 2026-02-09 18:00:29,068 | INFO     | . stage-out = 2 s
[2026-02-09 13:01:02] 2026-02-09 18:00:29,068 | INFO     | . log creation = 0 s
[2026-02-09 13:01:02] 2026-02-09 18:00:29,068 | INFO     | ..............................
[2026-02-09 13:01:02] 2026-02-09 18:00:29,417 | INFO     | 
[2026-02-09 13:01:02] 2026-02-09 18:00:29,417 | INFO     | job summary report
[2026-02-09 13:01:02] 2026-02-09 18:00:29,417 | INFO     | --------------------------------------------------
[2026-02-09 13:01:02] 2026-02-09 18:00:29,417 | INFO     | PanDA job id: 7006308452
[2026-02-09 13:01:02] 2026-02-09 18:00:29,417 | INFO     | task id: 48318018
[2026-02-09 13:01:02] 2026-02-09 18:00:29,417 | INFO     | errors: (none)
[2026-02-09 13:01:02] 2026-02-09 18:00:29,417 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-09 13:01:02] 2026-02-09 18:00:29,417 | INFO     | pilot state: finished 
[2026-02-09 13:01:02] 2026-02-09 18:00:29,417 | INFO     | transexitcode: 0
[2026-02-09 13:01:02] 2026-02-09 18:00:29,417 | INFO     | exeerrorcode: 0
[2026-02-09 13:01:02] 2026-02-09 18:00:29,417 | INFO     | exeerrordiag: 
[2026-02-09 13:01:02] 2026-02-09 18:00:29,417 | INFO     | exitcode: 0
[2026-02-09 13:01:02] 2026-02-09 18:00:29,417 | INFO     | exitmsg: OK
[2026-02-09 13:01:02] 2026-02-09 18:00:29,417 | INFO     | cpuconsumptiontime: 22962 s
[2026-02-09 13:01:02] 2026-02-09 18:00:29,418 | INFO     | nevents: 400
[2026-02-09 13:01:02] 2026-02-09 18:00:29,418 | INFO     | neventsw: 0
[2026-02-09 13:01:02] 2026-02-09 18:00:29,418 | INFO     | pid: 3522824
[2026-02-09 13:01:02] 2026-02-09 18:00:29,418 | INFO     | pgrp: 3522824
[2026-02-09 13:01:02] 2026-02-09 18:00:29,418 | INFO     | corecount: 8
[2026-02-09 13:01:02] 2026-02-09 18:00:29,418 | INFO     | event service: False
[2026-02-09 13:01:02] 2026-02-09 18:00:29,418 | INFO     | sizes: {0: 2282594, 1: 2282650, 2: 2283139, 13: 2283139, 4225: 2309005, 4227: 2318003, 4229: 2318381}
[2026-02-09 13:01:02] 2026-02-09 18:00:29,418 | INFO     | --------------------------------------------------
[2026-02-09 13:01:02] 2026-02-09 18:00:29,421 | INFO     | 
[2026-02-09 13:01:02] 2026-02-09 18:00:29,421 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-09 13:01:02] 2026-02-09 18:00:29,445 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-09 13:01:02] 2026-02-09 18:00:29,446 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-09 13:01:02] 2026-02-09 18:00:29,446 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-09 13:01:02] 2026-02-09 18:00:29,446 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-09 13:01:02] 2026-02-09 18:00:29,446 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-09 13:01:02] 2026-02-09 18:00:29,446 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-09 13:01:02] 2026-02-09 18:00:29,446 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-09 13:01:02] 2026-02-09 18:00:29,446 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-09 13:01:02] 2026-02-09 18:00:29,446 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-09 13:01:02] 2026-02-09 18:00:29,446 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-09 13:01:02] 2026-02-09 18:00:29,446 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-09 13:01:02] 2026-02-09 18:00:29,446 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-09 13:01:02] 2026-02-09 18:00:29,446 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-09 13:01:02] 2026-02-09 18:00:29,446 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-09 13:01:02] 2026-02-09 18:00:29,446 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-09 13:01:02] 2026-02-09 18:00:29,446 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-09 13:01:02] 2026-02-09 18:00:29,446 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-09 13:01:02] 2026-02-09 18:00:29,446 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-09 13:01:02] 2026-02-09 18:00:29,446 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-09 13:01:02] 2026-02-09 18:00:29,446 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-09 13:01:02] 2026-02-09 18:00:29,446 | INFO     | job 7006308452 has completed (purged errors)
[2026-02-09 13:01:02] 2026-02-09 18:00:29,447 | INFO     | overall cleanup function is called
[2026-02-09 13:01:02] 2026-02-09 18:00:30,455 | INFO     | --- collectZombieJob: --- 10, [3522824]
[2026-02-09 13:01:02] 2026-02-09 18:00:30,455 | INFO     | zombie collector waiting for pid 3522824
[2026-02-09 13:01:02] 2026-02-09 18:00:30,455 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-09 13:01:02] 2026-02-09 18:00:30,455 | INFO     | collected zombie processes
[2026-02-09 13:01:02] 2026-02-09 18:00:30,455 | INFO     | will attempt to kill all subprocesses of pid=3522824
[2026-02-09 13:01:02] 2026-02-09 18:00:31,763 | INFO     | process IDs to be killed: [3522824] (in reverse order)
[2026-02-09 13:01:02] 2026-02-09 18:00:31,947 | WARNING  | process 3522824 can no longer be monitored (due to stat problems) - aborting
[2026-02-09 13:01:02] 2026-02-09 18:00:31,993 | WARNING  | found no corresponding commands to process id(s)
[2026-02-09 13:01:02] 2026-02-09 18:00:31,993 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-09 13:01:02] 2026-02-09 18:00:32,051 | INFO     | did not find any defunct processes belonging to 3522824
[2026-02-09 13:01:02] 2026-02-09 18:00:32,151 | INFO     | did not find any defunct processes belonging to 3522824
[2026-02-09 13:01:02] 2026-02-09 18:00:32,152 | INFO     | ready for new job
[2026-02-09 13:01:02] 2026-02-09 18:00:32,152 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-09 13:01:02] 2026-02-09 18:00:32,153 | INFO     | **************************************
[2026-02-09 13:01:02] 2026-02-09 18:00:32,153 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-09 13:01:02] 2026-02-09 18:00:32,154 | INFO     | **************************************
[2026-02-09 13:01:02] 2026-02-09 18:00:32,154 | INFO     | 
[2026-02-09 13:01:02] 2026-02-09 18:00:32,163 | INFO     | architecture information:
[2026-02-09 13:01:02] 2026-02-09 18:00:32,168 | INFO     | executing command: cat /etc/os-release
[2026-02-09 13:01:02] 2026-02-09 18:00:32,200 | INFO     | cat /etc/os-release:
[2026-02-09 13:01:02] NAME="CentOS Linux"
[2026-02-09 13:01:02] VERSION="7 (Core)"
[2026-02-09 13:01:02] ID="centos"
[2026-02-09 13:01:02] ID_LIKE="rhel fedora"
[2026-02-09 13:01:02] VERSION_ID="7"
[2026-02-09 13:01:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-09 13:01:02] ANSI_COLOR="0;31"
[2026-02-09 13:01:02] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-09 13:01:02] HOME_URL="https://www.centos.org/"
[2026-02-09 13:01:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-09 13:01:02] 
[2026-02-09 13:01:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-09 13:01:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-09 13:01:02] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-09 13:01:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-09 13:01:02] 
[2026-02-09 13:01:02] 2026-02-09 18:00:32,200 | INFO     | **************************************
[2026-02-09 13:01:02] 2026-02-09 18:00:32,541 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-09 13:01:02] 2026-02-09 18:00:32,703 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-09 13:01:02] 2026-02-09 18:00:32,718 | INFO     | sufficient remaining disk space (163652304896 B)
[2026-02-09 13:01:02] 2026-02-09 18:00:32,718 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-09 13:01:02] 2026-02-09 18:00:32,718 | INFO     | current server update state: UPDATING_FINAL
[2026-02-09 13:01:02] 2026-02-09 18:00:32,718 | INFO     | update_server=False
[2026-02-09 13:01:02] 2026-02-09 18:00:32,718 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-09 13:01:02] 2026-02-09 18:00:32,719 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-09 13:01:02] 2026-02-09 18:00:33,200 | INFO     | all data control threads have been joined
[2026-02-09 13:01:02] 2026-02-09 18:00:33,208 | INFO     | number of running child processes to parent process 3522824: 1
[2026-02-09 13:01:02] 2026-02-09 18:00:33,208 | INFO     | maximum number of monitored processes: 6
[2026-02-09 13:01:02] 2026-02-09 18:00:33,208 | INFO     | aborting job monitoring since job object (job id=7006308452) has expired
[2026-02-09 13:01:02] 2026-02-09 18:00:33,208 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-09 13:01:02] 2026-02-09 18:00:33,208 | INFO     | will abort loop
[2026-02-09 13:01:02] 2026-02-09 18:00:33,703 | INFO     | all payload control threads have been joined
[2026-02-09 13:01:02] 2026-02-09 18:00:33,725 | INFO     | [job] retrieve thread has finished
[2026-02-09 13:01:02] 2026-02-09 18:00:33,731 | INFO     | [job] create_data_payload thread has finished
[2026-02-09 13:01:02] 2026-02-09 18:00:34,020 | INFO     | [payload] validate_pre thread has finished
[2026-02-09 13:01:02] 2026-02-09 18:00:34,048 | INFO     | all job control threads have been joined
[2026-02-09 13:01:02] 2026-02-09 18:00:34,059 | INFO     | [payload] validate_post thread has finished
[2026-02-09 13:01:02] 2026-02-09 18:00:34,135 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-09 13:01:02] 2026-02-09 18:00:34,206 | INFO     | [data] control thread has finished
[2026-02-09 13:01:02] 2026-02-09 18:00:34,214 | INFO     | [job] job monitor thread has finished
[2026-02-09 13:01:02] 2026-02-09 18:00:34,474 | INFO     | [job] validate thread has finished
[2026-02-09 13:01:02] 2026-02-09 18:00:34,708 | INFO     | [payload] control thread has finished
[2026-02-09 13:01:02] 2026-02-09 18:00:34,719 | INFO     | [payload] failed_post thread has finished
[2026-02-09 13:01:02] 2026-02-09 18:00:34,725 | INFO     | [data] copytool_out thread has finished
[2026-02-09 13:01:02] 2026-02-09 18:00:34,789 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-09 13:01:02] 2026-02-09 18:00:34,794 | INFO     | [data] copytool_in thread has finished
[2026-02-09 13:01:02] 2026-02-09 18:00:34,910 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-09 13:01:02] 2026-02-09 18:00:35,020 | INFO     | [payload] execute_payloads thread has finished
[2026-02-09 13:01:02] 2026-02-09 18:00:35,062 | INFO     | [job] control thread has finished
[2026-02-09 13:01:02] 2026-02-09 18:00:35,147 | INFO     | [job] queue monitor thread has finished
[2026-02-09 13:01:02] 2026-02-09 18:00:38,932 | INFO     | [data] queue_monitor thread has finished
[2026-02-09 13:01:02] 2026-02-09 18:00:53,188 | INFO     | [monitor] cgroup control has ended
[2026-02-09 13:01:02] 2026-02-09 18:00:53,856 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140284047210304)>', '<ExcThread(monitor, started 140283387815680)>']
[2026-02-09 13:01:02] 2026-02-09 18:00:58,882 | INFO     | all workflow threads have been joined
[2026-02-09 13:01:02] 2026-02-09 18:00:58,882 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-09 13:01:02] 2026-02-09 18:00:58,882 | INFO     | traces error code: 0
[2026-02-09 13:01:02] 2026-02-09 18:00:58,882 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-09 13:01:02] 2026-02-09 18:01:02,285 | INFO     | PID=3460756 has CPU usage=10.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-02-09 13:01:02] 2026-02-09 18:01:02,285 | INFO     | .. there are 87 such processes running
[2026-02-09 13:01:02] 2026-02-09 18:01:02,285 | INFO     | found 0 job(s) in 20 queues
[2026-02-09 13:01:02] 2026-02-09 18:01:02,285 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-09 13:01:02] 2026-02-09 18:01:02,285 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-09 13:01:02] 2026-02-09 18:01:02,285 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-09 13:01:02] 2026-02-09 18:01:02,285 | INFO     | [monitor] control thread has ended
[2026-02-09 13:01:02] 2026-02-09 18:01:02,450 [wrapper] ==== pilot stdout END ====
[2026-02-09 13:01:02] 2026-02-09 18:01:02,465 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-09 13:01:02] 2026-02-09 18:01:02,468 [wrapper] pilotpid: 3460756
[2026-02-09 13:01:02] 2026-02-09 18:01:02,471 [wrapper] Pilot exit status: 0
[2026-02-09 13:01:02] 2026-02-09 18:01:02,507 [wrapper] pandaids: 7006308452
[2026-02-09 13:01:02] 2026-02-09 18:01:02,715 [wrapper] cleanup supervisor_pilot 4080915 3460757
[2026-02-09 13:01:02] 2026-02-09 18:01:02,718 [wrapper] Test setup, not cleaning
[2026-02-09 13:01:02] 2026-02-09 18:01:02,724 [wrapper] apfmon messages muted
[2026-02-09 13:01:02] 2026-02-09 18:01:02,750 [wrapper] ==== wrapper stdout END ====
[2026-02-09 13:01:02] 2026-02-09 18:01:02,778 [wrapper] ==== wrapper stderr END ====
[2026-02-09 13:01:02]  *** Error codes and diagnostics ***
[2026-02-09 13:01:02]     "exeErrorCode": 0,
[2026-02-09 13:01:02]     "exeErrorDiag": "",
[2026-02-09 13:01:02]     "pilotErrorCode": 0,
[2026-02-09 13:01:02]     "pilotErrorDiag": "",
[2026-02-09 13:01:02]  *** Listing of results directory ***
[2026-02-09 13:01:02] total 659540
[2026-02-09 13:01:02] -rw-r--r--. 1 boincer umatlas    584627 Feb  9 06:10 pilot3.tar.gz
[2026-02-09 13:01:02] -rwx------. 1 boincer umatlas     36322 Feb  9 06:11 runpilot2-wrapper.sh
[2026-02-09 13:01:02] -rw-r--r--. 1 boincer umatlas      5111 Feb  9 06:11 queuedata.json
[2026-02-09 13:01:02] -rw-r--r--. 1 boincer umatlas       100 Feb  9 11:47 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-09 13:01:02] -rwxr-xr-x. 1 boincer umatlas      7986 Feb  9 11:47 run_atlas
[2026-02-09 13:01:02] -rw-r--r--. 1 boincer umatlas       105 Feb  9 11:47 job.xml
[2026-02-09 13:01:02] -rw-r--r--. 2 boincer umatlas 491784803 Feb  9 11:47 EVNT.48318016._000109.pool.root.1
[2026-02-09 13:01:02] -rw-r--r--. 2 boincer umatlas     15845 Feb  9 11:47 start_atlas.sh
[2026-02-09 13:01:02] drwxrwx--x. 2 boincer umatlas      4096 Feb  9 11:47 shared
[2026-02-09 13:01:02] -rw-r--r--. 2 boincer umatlas    597939 Feb  9 11:47 input.tar.gz
[2026-02-09 13:01:02] -rw-r--r--. 1 boincer umatlas         0 Feb  9 11:47 boinc_lockfile
[2026-02-09 13:01:02] -rw-r--r--. 1 boincer umatlas      2519 Feb  9 11:47 pandaJob.out
[2026-02-09 13:01:02] -rw-------. 1 boincer umatlas        57 Feb  9 11:47 setup.sh.local
[2026-02-09 13:01:02] -rw-------. 1 boincer umatlas   1513144 Feb  9 11:48 agis_ddmendpoints.agis.ALL.json
[2026-02-09 13:01:02] -rw-------. 1 boincer umatlas       430 Feb  9 11:49 workernode_map.json
[2026-02-09 13:01:02] -rw-------. 1 boincer umatlas   1009488 Feb  9 11:49 agis_schedconf.cvmfs.json
[2026-02-09 13:01:02] drwx------. 5 boincer umatlas      4096 Feb  9 11:49 pilot3
[2026-02-09 13:01:02] -rw-r--r--. 1 boincer umatlas      7172 Feb  9 12:58 init_data.xml
[2026-02-09 13:01:02] -rw-------. 1 boincer umatlas 177891514 Feb  9 13:00 HITS.48318018._005496.pool.root.1
[2026-02-09 13:01:02] -rw-r--r--. 1 boincer umatlas       530 Feb  9 13:00 boinc_task_state.xml
[2026-02-09 13:01:02] -rw-------. 1 boincer umatlas      1035 Feb  9 13:00 memory_monitor_summary.json
[2026-02-09 13:01:02] -rw-------. 1 boincer umatlas    301742 Feb  9 13:00 log.48318018._005496.job.log.tgz.1
[2026-02-09 13:01:02] -rw-------. 1 boincer umatlas        95 Feb  9 13:00 pilot_heartbeat.json
[2026-02-09 13:01:02] -rw-------. 1 boincer umatlas      6330 Feb  9 13:00 heartbeat.json
[2026-02-09 13:01:02] -rw-------. 1 boincer umatlas       824 Feb  9 13:01 pilotlog.txt
[2026-02-09 13:01:02] -rw-r--r--. 1 boincer umatlas      8192 Feb  9 13:01 boinc_mmap_file
[2026-02-09 13:01:02] -rw-r--r--. 1 boincer umatlas        27 Feb  9 13:01 wrapper_checkpoint.txt
[2026-02-09 13:01:02] -rw-------. 1 boincer umatlas    574158 Feb  9 13:01 log.48318018._005496.job.log.1
[2026-02-09 13:01:02] -rw-------. 1 boincer umatlas       357 Feb  9 13:01 output.list
[2026-02-09 13:01:02] -rw-r--r--. 1 boincer umatlas       620 Feb  9 13:01 runtime_log
[2026-02-09 13:01:02] -rw-------. 1 boincer umatlas    890880 Feb  9 13:01 result.tar.gz
[2026-02-09 13:01:02] -rw-------. 1 boincer umatlas       650 Feb  9 13:01 Vm9MDmeLe98nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm7hfKDmBVvlVm.diag
[2026-02-09 13:01:02] -rw-r--r--. 1 boincer umatlas      9331 Feb  9 13:01 runtime_log.err
[2026-02-09 13:01:02] -rw-r--r--. 1 boincer umatlas     21420 Feb  9 13:01 stderr.txt
[2026-02-09 13:01:02] HITS file was successfully produced:
[2026-02-09 13:01:02] -rw-------. 1 boincer umatlas 177891514 Feb  9 13:00 shared/HITS.pool.root.1
[2026-02-09 13:01:02]  *** Contents of shared directory: ***
[2026-02-09 13:01:02] total 655464
[2026-02-09 13:01:02] -rw-r--r--. 2 boincer umatlas 491784803 Feb  9 11:47 ATLAS.root_0
[2026-02-09 13:01:02] -rw-r--r--. 2 boincer umatlas     15845 Feb  9 11:47 start_atlas.sh
[2026-02-09 13:01:02] -rw-r--r--. 2 boincer umatlas    597939 Feb  9 11:47 input.tar.gz
[2026-02-09 13:01:02] -rw-------. 1 boincer umatlas 177891514 Feb  9 13:00 HITS.pool.root.1
[2026-02-09 13:01:02] -rw-------. 1 boincer umatlas    890880 Feb  9 13:01 result.tar.gz
13:01:04 (3424968): run_atlas exited; CPU time 23130.903567
13:01:04 (3424968): called boinc_finish(0)

</stderr_txt>
]]>

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