Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
05:36:55 (637212): wrapper (7.7.26015): starting
05:36:55 (637212): wrapper: running run_atlas (--nthreads 3)
[2026-02-10 05:36:56] Arguments: --nthreads 3
[2026-02-10 05:36:56] Threads: 3
[2026-02-10 05:36:56] Checking for CVMFS
[2026-02-10 05:36:56] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-10 05:36:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-10 05:36:56] Running cvmfs_config stat atlas.cern.ch
[2026-02-10 05:36:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-10 05:36:56] 2.9.2.0 4008882 5618 83700 156076 2 49 36522314 36864000 0 130560 0 2329945 99.983 201655 5088 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-10 05:36:56] CVMFS is ok
[2026-02-10 05:36:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-10 05:36:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-10 05:36:56] Further information can be found at the LHC@home message board.
[2026-02-10 05:36:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-10 05:36:56] Checking for apptainer binary...
[2026-02-10 05:36:56] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-10 05:36:56] Running /usr/bin/apptainer --version
[2026-02-10 05:36:56] apptainer version 1.4.1-1.1
[2026-02-10 05:36:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-10 05:36:56] belleA263b
[2026-02-10 05:36:56] apptainer works
[2026-02-10 05:36:56] Set ATHENA_PROC_NUMBER=3
[2026-02-10 05:36:56] Set ATHENA_CORE_NUMBER=3
[2026-02-10 05:36:56] Starting ATLAS job with PandaID=7008814020
[2026-02-10 05:36:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-10 07:34:22]  *** The last 200 lines of the pilot log: ***
[2026-02-10 07:34:22] 2026-02-10 06:33:38,700 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-10 07:34:22] 2026-02-10 06:33:38,700 | INFO     | log transfer has been attempted: DONE
[2026-02-10 07:34:22] 2026-02-10 06:33:38,700 | INFO     | job 7008814020 has finished - writing final server update
[2026-02-10 07:34:22] 2026-02-10 06:33:38,700 | INFO     | total number of processed events: 400 (read)
[2026-02-10 07:34:22] 2026-02-10 06:33:38,702 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-7008814020/memory_monitor_summary.json (trf name=prmon)
[2026-02-10 07:34:22] 2026-02-10 06:33:38,702 | INFO     | extracted standard info from prmon json
[2026-02-10 07:34:22] 2026-02-10 06:33:38,702 | INFO     | extracted standard memory fields from prmon json
[2026-02-10 07:34:22] 2026-02-10 06:33:38,702 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-10 07:34:22] 2026-02-10 06:33:38,702 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-10 07:34:22] 2026-02-10 06:33:38,702 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-10 07:34:22] 2026-02-10 06:33:38,703 | INFO     | fitting pss+swap vs Time
[2026-02-10 07:34:22] 2026-02-10 06:33:38,704 | INFO     | sum of square deviations: 471562330.0
[2026-02-10 07:34:22] 2026-02-10 06:33:38,704 | INFO     | sum of deviations: -12540354258.0
[2026-02-10 07:34:22] 2026-02-10 06:33:38,704 | INFO     | mean x: 1770701721.0
[2026-02-10 07:34:22] 2026-02-10 06:33:38,704 | INFO     | mean y: 2405934.486956522
[2026-02-10 07:34:22] 2026-02-10 06:33:38,704 | INFO     | intersect: 47091041845.227066
[2026-02-10 07:34:22] 2026-02-10 06:33:38,704 | INFO     | chi2: 2.3020637562472883
[2026-02-10 07:34:22] 2026-02-10 06:33:38,704 | INFO     | sum of square deviations: 412686807.5
[2026-02-10 07:34:22] 2026-02-10 06:33:38,704 | INFO     | sum of deviations: -5086393530.499998
[2026-02-10 07:34:22] 2026-02-10 06:33:38,704 | INFO     | mean x: 1770701568.5
[2026-02-10 07:34:22] 2026-02-10 06:33:38,704 | INFO     | mean y: 2424644.881818182
[2026-02-10 07:34:22] 2026-02-10 06:33:38,705 | INFO     | intersect: 21826444310.12057
[2026-02-10 07:34:22] 2026-02-10 06:33:38,705 | INFO     | chi2: 1.6746197606263458
[2026-02-10 07:34:22] 2026-02-10 06:33:38,705 | INFO     | current chi2=1.6746197606263458 (change=27.25571756725674 %)
[2026-02-10 07:34:22] 2026-02-10 06:33:38,705 | INFO     | sum of square deviations: 358927660.0
[2026-02-10 07:34:22] 2026-02-10 06:33:38,705 | INFO     | sum of deviations: -4325541841.999999
[2026-02-10 07:34:22] 2026-02-10 06:33:38,705 | INFO     | mean x: 1770701416.0
[2026-02-10 07:34:22] 2026-02-10 06:33:38,705 | INFO     | mean y: 2426804.6666666665
[2026-02-10 07:34:22] 2026-02-10 06:33:38,705 | INFO     | intersect: 21341665649.052876
[2026-02-10 07:34:22] 2026-02-10 06:33:38,705 | INFO     | chi2: 1.675319745960701
[2026-02-10 07:34:22] 2026-02-10 06:33:38,705 | INFO     | current chi2=1.675319745960701 (change=-0.04179965809631996 %)
[2026-02-10 07:34:22] 2026-02-10 06:33:38,705 | INFO     | right removable region: 104
[2026-02-10 07:34:22] 2026-02-10 06:33:38,705 | INFO     | sum of square deviations: 412686807.5
[2026-02-10 07:34:22] 2026-02-10 06:33:38,705 | INFO     | sum of deviations: -27362522126.5
[2026-02-10 07:34:22] 2026-02-10 06:33:38,706 | INFO     | mean x: 1770701873.5
[2026-02-10 07:34:22] 2026-02-10 06:33:38,706 | INFO     | mean y: 2443336.6454545455
[2026-02-10 07:34:22] 2026-02-10 06:33:38,706 | INFO     | intersect: 117405927801.26274
[2026-02-10 07:34:22] 2026-02-10 06:33:38,706 | INFO     | chi2: 0.8207998961896216
[2026-02-10 07:34:22] 2026-02-10 06:33:38,706 | INFO     | current chi2=0.8207998961896216 (change=64.34504066352838 %)
[2026-02-10 07:34:22] 2026-02-10 06:33:38,706 | INFO     | sum of square deviations: 358927660.0
[2026-02-10 07:34:22] 2026-02-10 06:33:38,706 | INFO     | sum of deviations: -22300668774.0
[2026-02-10 07:34:22] 2026-02-10 06:33:38,706 | INFO     | mean x: 1770702026.0
[2026-02-10 07:34:22] 2026-02-10 06:33:38,706 | INFO     | mean y: 2428955.380952381
[2026-02-10 07:34:22] 2026-02-10 06:33:38,706 | INFO     | intersect: 110018579227.21214
[2026-02-10 07:34:22] 2026-02-10 06:33:38,706 | INFO     | chi2: 0.8086351335989581
[2026-02-10 07:34:22] 2026-02-10 06:33:38,706 | INFO     | current chi2=0.8086351335989581 (change=1.4820619065786467 %)
[2026-02-10 07:34:22] 2026-02-10 06:33:38,706 | INFO     | left removable region: 20
[2026-02-10 07:34:22] 2026-02-10 06:33:38,706 | INFO     | sum of square deviations: 183761585.0
[2026-02-10 07:34:22] 2026-02-10 06:33:38,706 | INFO     | sum of deviations: -4955363090.5
[2026-02-10 07:34:22] 2026-02-10 06:33:38,707 | INFO     | mean x: 1770701995.5
[2026-02-10 07:34:22] 2026-02-10 06:33:38,707 | INFO     | mean y: 2418481.7976190476
[2026-02-10 07:34:22] 2026-02-10 06:33:38,707 | INFO     | intersect: 47751632838.951744
[2026-02-10 07:34:22] 2026-02-10 06:33:38,707 | INFO     | chi2: 0.06577124038406605
[2026-02-10 07:34:22] 2026-02-10 06:33:38,707 | INFO     | current memory leak: -26.97 B/s (using 84 data points, chi2=0.07)
[2026-02-10 07:34:22] 2026-02-10 06:33:38,707 | INFO     | could have reported an average CPU frequency of 3738 MHz (7 samples)
[2026-02-10 07:34:22] 2026-02-10 06:33:38,707 | INFO     | ..............................
[2026-02-10 07:34:22] 2026-02-10 06:33:38,707 | INFO     | . Timing measurements:
[2026-02-10 07:34:22] 2026-02-10 06:33:38,707 | INFO     | . get job = 0 s
[2026-02-10 07:34:22] 2026-02-10 06:33:38,707 | INFO     | . initial setup = 3 s
[2026-02-10 07:34:22] 2026-02-10 06:33:38,707 | INFO     | . payload setup = 3 s
[2026-02-10 07:34:22] 2026-02-10 06:33:38,707 | INFO     | . stage-in = 0 s
[2026-02-10 07:34:22] 2026-02-10 06:33:38,707 | INFO     | . payload execution = 6970 s
[2026-02-10 07:34:22] 2026-02-10 06:33:38,707 | INFO     | . stage-out = 0 s
[2026-02-10 07:34:22] 2026-02-10 06:33:38,707 | INFO     | . log creation = 0 s
[2026-02-10 07:34:22] 2026-02-10 06:33:38,707 | INFO     | ..............................
[2026-02-10 07:34:22] 2026-02-10 06:33:39,004 | INFO     | 
[2026-02-10 07:34:22] 2026-02-10 06:33:39,005 | INFO     | job summary report
[2026-02-10 07:34:22] 2026-02-10 06:33:39,005 | INFO     | --------------------------------------------------
[2026-02-10 07:34:22] 2026-02-10 06:33:39,005 | INFO     | PanDA job id: 7008814020
[2026-02-10 07:34:22] 2026-02-10 06:33:39,005 | INFO     | task id: 48431096
[2026-02-10 07:34:22] 2026-02-10 06:33:39,005 | INFO     | errors: (none)
[2026-02-10 07:34:22] 2026-02-10 06:33:39,005 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-10 07:34:22] 2026-02-10 06:33:39,005 | INFO     | pilot state: finished 
[2026-02-10 07:34:22] 2026-02-10 06:33:39,005 | INFO     | transexitcode: 0
[2026-02-10 07:34:22] 2026-02-10 06:33:39,005 | INFO     | exeerrorcode: 0
[2026-02-10 07:34:22] 2026-02-10 06:33:39,005 | INFO     | exeerrordiag: 
[2026-02-10 07:34:22] 2026-02-10 06:33:39,005 | INFO     | exitcode: 0
[2026-02-10 07:34:22] 2026-02-10 06:33:39,005 | INFO     | exitmsg: OK
[2026-02-10 07:34:22] 2026-02-10 06:33:39,005 | INFO     | cpuconsumptiontime: 20233 s
[2026-02-10 07:34:22] 2026-02-10 06:33:39,005 | INFO     | nevents: 400
[2026-02-10 07:34:22] 2026-02-10 06:33:39,005 | INFO     | neventsw: 0
[2026-02-10 07:34:22] 2026-02-10 06:33:39,005 | INFO     | pid: 645683
[2026-02-10 07:34:22] 2026-02-10 06:33:39,005 | INFO     | pgrp: 645683
[2026-02-10 07:34:22] 2026-02-10 06:33:39,005 | INFO     | corecount: 3
[2026-02-10 07:34:22] 2026-02-10 06:33:39,006 | INFO     | event service: False
[2026-02-10 07:34:22] 2026-02-10 06:33:39,006 | INFO     | sizes: {0: 2283089, 11: 2283089, 6976: 2310501, 6978: 2319505, 6980: 2319755}
[2026-02-10 07:34:22] 2026-02-10 06:33:39,006 | INFO     | --------------------------------------------------
[2026-02-10 07:34:22] 2026-02-10 06:33:39,006 | INFO     | 
[2026-02-10 07:34:22] 2026-02-10 06:33:39,006 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-02-10 07:34:22] 2026-02-10 06:33:39,021 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-10 07:34:22] 2026-02-10 06:33:39,021 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-10 07:34:22] 2026-02-10 06:33:39,021 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-10 07:34:22] 2026-02-10 06:33:39,021 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-10 07:34:22] 2026-02-10 06:33:39,021 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-10 07:34:22] 2026-02-10 06:33:39,021 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-10 07:34:22] 2026-02-10 06:33:39,021 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-10 07:34:22] 2026-02-10 06:33:39,021 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-10 07:34:22] 2026-02-10 06:33:39,021 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-10 07:34:22] 2026-02-10 06:33:39,021 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-10 07:34:22] 2026-02-10 06:33:39,021 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-10 07:34:22] 2026-02-10 06:33:39,021 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-10 07:34:22] 2026-02-10 06:33:39,021 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-10 07:34:22] 2026-02-10 06:33:39,021 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-10 07:34:22] 2026-02-10 06:33:39,021 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-10 07:34:22] 2026-02-10 06:33:39,021 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-10 07:34:22] 2026-02-10 06:33:39,021 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-10 07:34:22] 2026-02-10 06:33:39,021 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-10 07:34:22] 2026-02-10 06:33:39,021 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-10 07:34:22] 2026-02-10 06:33:39,021 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-10 07:34:22] 2026-02-10 06:33:39,021 | INFO     | job 7008814020 has completed (purged errors)
[2026-02-10 07:34:22] 2026-02-10 06:33:39,022 | INFO     | overall cleanup function is called
[2026-02-10 07:34:22] 2026-02-10 06:33:40,028 | INFO     | --- collectZombieJob: --- 10, [645683]
[2026-02-10 07:34:22] 2026-02-10 06:33:40,028 | INFO     | zombie collector waiting for pid 645683
[2026-02-10 07:34:22] 2026-02-10 06:33:40,029 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-10 07:34:22] 2026-02-10 06:33:40,029 | INFO     | collected zombie processes
[2026-02-10 07:34:22] 2026-02-10 06:33:40,029 | INFO     | will attempt to kill all subprocesses of pid=645683
[2026-02-10 07:34:22] 2026-02-10 06:33:40,075 | INFO     | process IDs to be killed: [645683] (in reverse order)
[2026-02-10 07:34:22] 2026-02-10 06:33:40,102 | WARNING  | found no corresponding commands to process id(s)
[2026-02-10 07:34:22] 2026-02-10 06:33:40,102 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-10 07:34:22] 2026-02-10 06:33:40,104 | INFO     | did not find any defunct processes belonging to 645683
[2026-02-10 07:34:22] 2026-02-10 06:33:40,105 | INFO     | did not find any defunct processes belonging to 645683
[2026-02-10 07:34:22] 2026-02-10 06:33:40,105 | INFO     | ready for new job
[2026-02-10 07:34:22] 2026-02-10 06:33:40,105 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-10 07:34:22] 2026-02-10 06:33:40,106 | INFO     | **************************************
[2026-02-10 07:34:22] 2026-02-10 06:33:40,106 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-10 07:34:22] 2026-02-10 06:33:40,106 | INFO     | **************************************
[2026-02-10 07:34:22] 2026-02-10 06:33:40,106 | INFO     | 
[2026-02-10 07:34:22] 2026-02-10 06:33:40,106 | INFO     | architecture information:
[2026-02-10 07:34:22] 2026-02-10 06:33:40,106 | INFO     | executing command: cat /etc/os-release
[2026-02-10 07:34:22] 2026-02-10 06:33:40,115 | INFO     | cat /etc/os-release:
[2026-02-10 07:34:22] NAME="CentOS Linux"
[2026-02-10 07:34:22] VERSION="7 (Core)"
[2026-02-10 07:34:22] ID="centos"
[2026-02-10 07:34:22] ID_LIKE="rhel fedora"
[2026-02-10 07:34:22] VERSION_ID="7"
[2026-02-10 07:34:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-10 07:34:22] ANSI_COLOR="0;31"
[2026-02-10 07:34:22] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-10 07:34:22] HOME_URL="https://www.centos.org/"
[2026-02-10 07:34:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-10 07:34:22] 
[2026-02-10 07:34:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-10 07:34:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-10 07:34:22] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-10 07:34:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-10 07:34:22] 
[2026-02-10 07:34:22] 2026-02-10 06:33:40,115 | INFO     | **************************************
[2026-02-10 07:34:22] 2026-02-10 06:33:40,619 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-10 07:34:22] 2026-02-10 06:33:40,632 | INFO     | sufficient remaining disk space (364026789888 B)
[2026-02-10 07:34:22] 2026-02-10 06:33:40,633 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-10 07:34:22] 2026-02-10 06:33:40,633 | INFO     | current server update state: UPDATING_FINAL
[2026-02-10 07:34:22] 2026-02-10 06:33:40,633 | INFO     | update_server=False
[2026-02-10 07:34:22] 2026-02-10 06:33:40,633 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-10 07:34:22] 2026-02-10 06:33:40,633 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-10 07:34:22] 2026-02-10 06:33:41,010 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-10 07:34:22] 2026-02-10 06:33:41,011 | INFO     | aborting loop
[2026-02-10 07:34:22] 2026-02-10 06:33:41,377 | INFO     | all payload control threads have been joined
[2026-02-10 07:34:22] 2026-02-10 06:33:41,392 | INFO     | all data control threads have been joined
[2026-02-10 07:34:22] 2026-02-10 06:33:41,638 | INFO     | [job] queue monitor thread has finished
[2026-02-10 07:34:22] 2026-02-10 06:33:41,639 | INFO     | [job] retrieve thread has finished
[2026-02-10 07:34:22] 2026-02-10 06:33:41,734 | INFO     | [payload] execute_payloads thread has finished
[2026-02-10 07:34:22] 2026-02-10 06:33:41,740 | INFO     | [payload] validate_pre thread has finished
[2026-02-10 07:34:22] 2026-02-10 06:33:41,770 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-10 07:34:22] 2026-02-10 06:33:41,823 | INFO     | all job control threads have been joined
[2026-02-10 07:34:22] 2026-02-10 06:33:41,833 | INFO     | [data] copytool_in thread has finished
[2026-02-10 07:34:22] 2026-02-10 06:33:42,016 | INFO     | [job] job monitor thread has finished
[2026-02-10 07:34:22] 2026-02-10 06:33:42,163 | INFO     | [payload] validate_post thread has finished
[2026-02-10 07:34:22] 2026-02-10 06:33:42,305 | INFO     | [payload] failed_post thread has finished
[2026-02-10 07:34:22] 2026-02-10 06:33:42,382 | INFO     | [payload] control thread has finished
[2026-02-10 07:34:22] 2026-02-10 06:33:42,398 | INFO     | [data] control thread has finished
[2026-02-10 07:34:22] 2026-02-10 06:33:42,829 | INFO     | [job] control thread has finished
[2026-02-10 07:34:22] 2026-02-10 06:33:43,021 | INFO     | [job] validate thread has finished
[2026-02-10 07:34:22] 2026-02-10 06:33:43,108 | INFO     | [job] create_data_payload thread has finished
[2026-02-10 07:34:22] 2026-02-10 06:33:43,777 | INFO     | [data] copytool_out thread has finished
[2026-02-10 07:34:22] 2026-02-10 06:33:43,949 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-10 07:34:22] 2026-02-10 06:33:47,955 | INFO     | [data] queue_monitor thread has finished
[2026-02-10 07:34:22] 2026-02-10 06:33:51,394 | INFO     | job.realtimelogging is not enabled
[2026-02-10 07:34:22] 2026-02-10 06:33:52,400 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-10 07:34:22] 2026-02-10 06:34:11,640 | INFO     | PID=641256 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-10 07:34:22] 2026-02-10 06:34:11,641 | INFO     | found 0 job(s) in 20 queues
[2026-02-10 07:34:22] 2026-02-10 06:34:11,641 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-10 07:34:22] 2026-02-10 06:34:11,641 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-10 07:34:22] 2026-02-10 06:34:16,812 | INFO     | [monitor] cgroup control has ended
[2026-02-10 07:34:22] 2026-02-10 06:34:17,664 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140578207012672)>', '<ExcThread(monitor, started 140577349818112)>']
[2026-02-10 07:34:22] 2026-02-10 06:34:17,673 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-10 07:34:22] 2026-02-10 06:34:17,674 | INFO     | [monitor] control thread has ended
[2026-02-10 07:34:22] 2026-02-10 06:34:22,690 | INFO     | all workflow threads have been joined
[2026-02-10 07:34:22] 2026-02-10 06:34:22,690 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-10 07:34:22] 2026-02-10 06:34:22,690 | INFO     | traces error code: 0
[2026-02-10 07:34:22] 2026-02-10 06:34:22,690 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-10 07:34:22] 2026-02-10 06:34:22,741 [wrapper] ==== pilot stdout END ====
[2026-02-10 07:34:22] 2026-02-10 06:34:22,744 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-10 07:34:22] 2026-02-10 06:34:22,747 [wrapper] pilotpid: 641256
[2026-02-10 07:34:22] 2026-02-10 06:34:22,749 [wrapper] Pilot exit status: 0
[2026-02-10 07:34:22] 2026-02-10 06:34:22,757 [wrapper] pandaids: 7008814020
[2026-02-10 07:34:22] 2026-02-10 06:34:22,775 [wrapper] cleanup supervisor_pilot  651067 641257
[2026-02-10 07:34:22] 2026-02-10 06:34:22,777 [wrapper] Test setup, not cleaning
[2026-02-10 07:34:22] 2026-02-10 06:34:22,780 [wrapper] apfmon messages muted
[2026-02-10 07:34:22] 2026-02-10 06:34:22,782 [wrapper] ==== wrapper stdout END ====
[2026-02-10 07:34:22] 2026-02-10 06:34:22,785 [wrapper] ==== wrapper stderr END ====
[2026-02-10 07:34:22]  *** Error codes and diagnostics ***
[2026-02-10 07:34:22]     "exeErrorCode": 0,
[2026-02-10 07:34:22]     "exeErrorDiag": "",
[2026-02-10 07:34:22]     "pilotErrorCode": 0,
[2026-02-10 07:34:22]     "pilotErrorDiag": "",
[2026-02-10 07:34:22]  *** Listing of results directory ***
[2026-02-10 07:34:22] total 946456
[2026-02-10 07:34:22] -rw-r--r-- 1 boinc boinc    584627 Feb  9 09:16 pilot3.tar.gz
[2026-02-10 07:34:22] -rwx------ 1 boinc boinc     36322 Feb  9 09:19 runpilot2-wrapper.sh
[2026-02-10 07:34:22] -rw-r--r-- 1 boinc boinc      5111 Feb  9 09:22 queuedata.json
[2026-02-10 07:34:22] -rw-r--r-- 1 boinc boinc       100 Feb 10 05:36 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-10 07:34:22] -rwxr-xr-x 1 boinc boinc      7986 Feb 10 05:36 run_atlas
[2026-02-10 07:34:22] -rw-r--r-- 1 boinc boinc       105 Feb 10 05:36 job.xml
[2026-02-10 07:34:22] -rw-r--r-- 2 boinc boinc 682090142 Feb 10 05:36 EVNT.48431094._000358.pool.root.1
[2026-02-10 07:34:22] -rw-r--r-- 2 boinc boinc    597968 Feb 10 05:36 input.tar.gz
[2026-02-10 07:34:22] -rw-r--r-- 2 boinc boinc     15845 Feb 10 05:36 start_atlas.sh
[2026-02-10 07:34:22] drwxrwx--x 2 boinc boinc      4096 Feb 10 05:36 shared
[2026-02-10 07:34:22] -rw-r--r-- 1 boinc boinc         0 Feb 10 05:36 boinc_setup_complete
[2026-02-10 07:34:22] -rw-r--r-- 1 boinc boinc      6449 Feb 10 05:36 init_data.xml
[2026-02-10 07:34:22] -rw-r--r-- 1 boinc boinc         0 Feb 10 05:36 boinc_lockfile
[2026-02-10 07:34:22] -rw-r--r-- 1 boinc boinc      2556 Feb 10 05:36 pandaJob.out
[2026-02-10 07:34:22] -rw------- 1 boinc boinc   1009504 Feb 10 05:37 agis_schedconf.cvmfs.json
[2026-02-10 07:34:22] -rw------- 1 boinc boinc   1513144 Feb 10 05:37 agis_ddmendpoints.agis.ALL.json
[2026-02-10 07:34:22] -rw------- 1 boinc boinc       419 Feb 10 05:37 workernode_map.json
[2026-02-10 07:34:22] drwx------ 5 boinc boinc      4096 Feb 10 05:37 pilot3
[2026-02-10 07:34:22] -rw------- 1 boinc boinc 280510987 Feb 10 07:33 HITS.48431096._016455.pool.root.1
[2026-02-10 07:34:22] -rw-r--r-- 1 boinc boinc       530 Feb 10 07:33 boinc_task_state.xml
[2026-02-10 07:34:22] -rw------- 1 boinc boinc      1011 Feb 10 07:33 memory_monitor_summary.json
[2026-02-10 07:34:22] -rw------- 1 boinc boinc    311054 Feb 10 07:33 log.48431096._016455.job.log.tgz.1
[2026-02-10 07:34:22] -rw------- 1 boinc boinc      6298 Feb 10 07:33 heartbeat.json
[2026-02-10 07:34:22] -rw-r--r-- 1 boinc boinc      8192 Feb 10 07:34 boinc_mmap_file
[2026-02-10 07:34:22] -rw-r--r-- 1 boinc boinc        27 Feb 10 07:34 wrapper_checkpoint.txt
[2026-02-10 07:34:22] -rw------- 1 boinc boinc        95 Feb 10 07:34 pilot_heartbeat.json
[2026-02-10 07:34:22] -rw------- 1 boinc boinc      4819 Feb 10 07:34 pilotlog.txt
[2026-02-10 07:34:22] -rw------- 1 boinc boinc   1004140 Feb 10 07:34 log.48431096._016455.job.log.1
[2026-02-10 07:34:22] -rw------- 1 boinc boinc       357 Feb 10 07:34 output.list
[2026-02-10 07:34:22] -rw-r--r-- 1 boinc boinc       620 Feb 10 07:34 runtime_log
[2026-02-10 07:34:22] -rw------- 1 boinc boinc   1331200 Feb 10 07:34 result.tar.gz
[2026-02-10 07:34:22] -rw-r--r-- 1 boinc boinc      8916 Feb 10 07:34 runtime_log.err
[2026-02-10 07:34:22] -rw------- 1 boinc boinc       661 Feb 10 07:34 YpBODm0fb98n9Rq4apOajLDm4fhM0noT9bVooX4SDmj0eKDmRq3h0n.diag
[2026-02-10 07:34:22] -rw-r--r-- 1 boinc boinc     20994 Feb 10 07:34 stderr.txt
[2026-02-10 07:34:22] HITS file was successfully produced:
[2026-02-10 07:34:22] -rw------- 1 boinc boinc 280510987 Feb 10 07:33 shared/HITS.pool.root.1
[2026-02-10 07:34:22]  *** Contents of shared directory: ***
[2026-02-10 07:34:22] total 941952
[2026-02-10 07:34:22] -rw-r--r-- 2 boinc boinc 682090142 Feb 10 05:36 ATLAS.root_0
[2026-02-10 07:34:22] -rw-r--r-- 2 boinc boinc    597968 Feb 10 05:36 input.tar.gz
[2026-02-10 07:34:22] -rw-r--r-- 2 boinc boinc     15845 Feb 10 05:36 start_atlas.sh
[2026-02-10 07:34:22] -rw------- 1 boinc boinc 280510987 Feb 10 07:33 HITS.pool.root.1
[2026-02-10 07:34:22] -rw------- 1 boinc boinc   1331200 Feb 10 07:34 result.tar.gz
07:34:45 (637212): run_atlas exited; CPU time 20272.591813
07:34:45 (637212): called boinc_finish(0)

</stderr_txt>
]]>

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