Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2026-02-09 07:26:37 (23684): vboxwrapper version 26210
2026-02-09 07:26:37 (23684): BOINC client version: 8.0.2
2026-02-09 07:26:39 (23684): Detected: VirtualBox VboxManage Interface (Version: 7.2.4)
2026-02-09 07:26:41 (23684): Successfully copied 'init_data.xml' to the shared directory.
2026-02-09 07:26:41 (23684): Create VM. (boinc_0caa6e41c6719f19, slot#23)
2026-02-09 07:26:42 (23684): Setting Memory Size for VM. (4800MB)
2026-02-09 07:26:42 (23684): Setting CPU Count for VM. (8)
2026-02-09 07:26:43 (23684): Setting Chipset Options for VM.
2026-02-09 07:26:43 (23684): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-02-09 07:26:43 (23684): Setting Boot Options for VM.
2026-02-09 07:26:44 (23684): Setting Network Configuration for NAT. (Driver: virtio)
2026-02-09 07:26:44 (23684): Enabling VM Network Access.
2026-02-09 07:26:45 (23684): Disabling USB Support for VM.
2026-02-09 07:26:45 (23684): Disabling COM Port Support for VM.
2026-02-09 07:26:45 (23684): Disabling LPT Port Support for VM.
2026-02-09 07:26:46 (23684): Disabling Audio Support for VM.
2026-02-09 07:26:46 (23684): Disabling Clipboard Support for VM.
2026-02-09 07:26:47 (23684): Disabling Drag and Drop Support for VM.
2026-02-09 07:26:47 (23684): Adding storage controller(s) to VM.
2026-02-09 07:26:47 (23684): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-02-09 07:26:50 (23684): Adding VirtualBox Guest Additions to VM.
2026-02-09 07:26:50 (23684): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-02-09 07:26:51 (23684): forwarding host port 64702 to guest port 80
2026-02-09 07:26:51 (23684): Enabling remote desktop for VM.
2026-02-09 07:26:52 (23684): Enabling shared directory for VM.
2026-02-09 07:26:52 (23684): Starting VM using VBoxManage interface. (boinc_0caa6e41c6719f19, slot#23)
2026-02-09 07:27:05 (23684): Successfully started VM. (PID = '20304')
2026-02-09 07:27:05 (23684): Reporting VM Process ID to BOINC.
2026-02-09 07:27:05 (23684): Guest Log: BIOS: VirtualBox 7.2.4
2026-02-09 07:27:05 (23684): Guest Log: CPUID EDX: 0x178bfbff
2026-02-09 07:27:05 (23684): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-02-09 07:27:05 (23684): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-02-09 07:27:05 (23684): VM state change detected. (old = 'poweredoff', new = 'running')
2026-02-09 07:27:05 (23684): Detected: Web Application Enabled (http://localhost:64702)
2026-02-09 07:27:05 (23684): Detected: Remote Desktop Enabled (localhost:64703)
2026-02-09 07:27:05 (23684): Preference change detected
2026-02-09 07:27:05 (23684): Setting CPU throttle for VM. (100%)
2026-02-09 07:27:05 (23684): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-02-09 07:27:07 (23684): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-02-09 07:27:07 (23684): Guest Log: BIOS: Booting from Hard Disk...
2026-02-09 07:27:11 (23684): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-02-09 07:27:11 (23684): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-02-09 07:27:11 (23684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-02-09 07:27:11 (23684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-02-09 07:27:11 (23684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-02-09 07:27:11 (23684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-02-09 07:27:11 (23684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-02-09 07:27:11 (23684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-02-09 07:27:11 (23684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-02-09 07:27:11 (23684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-02-09 07:27:11 (23684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-02-09 07:27:11 (23684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-02-09 07:27:11 (23684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-02-09 07:27:11 (23684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-02-09 07:27:11 (23684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-02-09 07:27:11 (23684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-02-09 07:27:11 (23684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-02-09 07:27:11 (23684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-02-09 07:27:11 (23684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-02-09 07:27:11 (23684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-02-09 07:27:11 (23684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-02-09 07:27:11 (23684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-02-09 07:27:11 (23684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-02-09 07:27:11 (23684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-02-09 07:27:11 (23684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-02-09 07:27:11 (23684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-02-09 07:27:11 (23684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-02-09 07:27:11 (23684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-02-09 07:27:11 (23684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-02-09 07:27:11 (23684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-02-09 07:27:11 (23684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-02-09 07:27:11 (23684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-02-09 07:27:23 (23684): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-02-09 07:27:23 (23684): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-02-09 07:27:39 (23684): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-02-09 07:27:39 (23684): Guest Log: 00:00:00.004034 main     Log opened 2026-02-09T07:27:37.984520000Z
2026-02-09 07:27:39 (23684): Guest Log: 00:00:00.005067 main     OS Product: Linux
2026-02-09 07:27:39 (23684): Guest Log: 00:00:00.005212 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-02-09 07:27:39 (23684): Guest Log: 00:00:00.006477 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-02-09 07:27:39 (23684): Guest Log: 00:00:00.007360 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-02-09 07:27:39 (23684): Guest Log: 00:00:00.007377 main     Process ID: 1374
2026-02-09 07:27:39 (23684): Guest Log: 00:00:00.007380 main     Package type: LINUX_64BITS_GENERIC
2026-02-09 07:27:39 (23684): Guest Log: 00:00:00.017245 main     5.2.32 r132073 started. Verbose level = 0
2026-02-09 07:27:39 (23684): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-02-09 07:27:39 (23684): Guest Log: [INFO] Mounting shared directory
2026-02-09 07:27:39 (23684): Guest Log: [INFO] Checking for init_data.xml
2026-02-09 07:27:45 (23684): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-02-09 07:27:45 (23684): Guest Log: [INFO] Detected branch: prod
2026-02-09 07:27:46 (23684): Guest Log: This is the prod version of the ATLAS job wrapper
2026-02-09 07:27:46 (23684): Guest Log: Copying input files
2026-02-09 07:27:49 (23684): Guest Log: 00:00:10.033503 timesync vgsvcTimeSyncWorker: Radical guest time change: 21 611 045 716 000ns (GuestNow=1 770 643 669 058 922 000 ns GuestLast=1 770 622 058 013 206 000 ns fSetTimeLastLoop=true )
2026-02-09 07:28:02 (23684): Guest Log: Copied input files into RunAtlas.
2026-02-09 07:28:02 (23684): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-02-09 07:28:02 (23684): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-02-09 07:28:02 (23684): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-02-09 07:28:02 (23684): Guest Log: Further information can be found at the LHC@home message board.
2026-02-09 07:28:35 (23684): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-02-09 07:28:35 (23684): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-02-09 07:28:35 (23684): Guest Log: 2.6.3.0 1653 0 30148 156054 4 1 3117739 4096000 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-02-09 07:28:38 (23684): Guest Log: copied the webapp to /var/www
2026-02-09 07:28:38 (23684): Guest Log: ATHENA_PROC_NUMBER=8
2026-02-09 07:28:38 (23684): Guest Log: ATHENA_CORE_NUMBER=8
2026-02-09 07:28:39 (23684): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-02-09 07:28:39 (23684): Guest Log:  *** Starting ATLAS job. (PandaID=7008631762 taskID=48431096) ***
2026-02-09 09:11:02 (23684): Status Report: Elapsed Time: '6000.000000'
2026-02-09 09:11:02 (23684): Status Report: CPU Time: '38046.062500'
2026-02-09 09:27:27 (23684): VM state change detected. (old = 'running', new = 'paused')
2026-02-09 10:17:40 (23684): VM state change detected. (old = 'paused', new = 'running')
2026-02-09 10:17:43 (23684): Guest Log: 01:59:51.452693 timesync vgsvcTimeSyncWorker: Radical host time change: 3 022 470 000 000ns (HostNow=1 770 653 862 958 000 000 ns HostLast=1 770 650 840 488 000 000 ns)
2026-02-09 10:17:54 (23684): Guest Log: 02:00:01.453972 timesync vgsvcTimeSyncWorker: Radical guest time change: 3 022 481 830 000ns (GuestNow=1 770 653 872 959 597 000 ns GuestLast=1 770 650 850 477 767 000 ns fSetTimeLastLoop=true )
2026-02-09 11:45:49 (23684): Status Report: Elapsed Time: '12000.000000'
2026-02-09 11:45:49 (23684): Status Report: CPU Time: '83824.781250'
2026-02-09 12:42:01 (23684): Guest Log:  *** Job finished ***
2026-02-09 12:42:01 (23684): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-02-09 12:42:01 (23684): Guest Log: 2026-02-09 18:41:47,036 | INFO     | all workflow threads have been joined
2026-02-09 12:42:01 (23684): Guest Log: 2026-02-09 18:41:47,038 | INFO     | end of generic workflow (traces error code: 0)
2026-02-09 12:42:01 (23684): Guest Log: 2026-02-09 18:41:47,041 | INFO     | traces error code: 0
2026-02-09 12:42:01 (23684): Guest Log: 2026-02-09 18:41:47,044 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-02-09 12:42:01 (23684): Guest Log: 2026-02-09 18:41:59,701 | INFO     | PID=6113 has CPU usage=7.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-02-09 12:42:01 (23684): Guest Log: 2026-02-09 18:41:59,704 | INFO     | found 0 job(s) in 20 queues
2026-02-09 12:42:01 (23684): Guest Log: 2026-02-09 18:41:59,705 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-02-09 12:42:01 (23684): Guest Log: 2026-02-09 18:41:59,706 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-02-09 12:42:01 (23684): Guest Log: 2026-02-09 18:41:59,706 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-02-09 12:42:01 (23684): Guest Log: 2026-02-09 18:41:59,706 | INFO     | [monitor] control thread has ended
2026-02-09 12:42:01 (23684): Guest Log: 2026-02-09 18:41:59,960 [wrapper] ==== pilot stdout END ====
2026-02-09 12:42:01 (23684): Guest Log: 2026-02-09 18:41:59,979 [wrapper] ==== wrapper stdout RESUME ====
2026-02-09 12:42:01 (23684): Guest Log: 2026-02-09 18:41:59,987 [wrapper] pilotpid: 6113
2026-02-09 12:42:01 (23684): Guest Log: 2026-02-09 18:42:00,002 [wrapper] Pilot exit status: 0
2026-02-09 12:42:01 (23684): Guest Log: 2026-02-09 18:42:00,148 [wrapper] pandaids: 7008631762
2026-02-09 12:42:01 (23684): Guest Log: 2026-02-09 18:42:00,198 [wrapper] cleanup supervisor_pilot 28978 6114
2026-02-09 12:42:01 (23684): Guest Log: 2026-02-09 18:42:00,209 [wrapper] Test setup, not cleaning
2026-02-09 12:42:01 (23684): Guest Log: 2026-02-09 18:42:00,218 [wrapper] apfmon messages muted
2026-02-09 12:42:01 (23684): Guest Log: 2026-02-09 18:42:00,225 [wrapper] ==== wrapper stdout END ====
2026-02-09 12:42:01 (23684): Guest Log: 2026-02-09 18:42:00,232 [wrapper] ==== wrapper stderr END ====
2026-02-09 12:42:01 (23684): Guest Log:  *** Error codes and diagnostics ***
2026-02-09 12:42:01 (23684): Guest Log:     "exeErrorCode": 0,
2026-02-09 12:42:01 (23684): Guest Log:     "exeErrorDiag": "",
2026-02-09 12:42:01 (23684): Guest Log:     "pilotErrorCode": 0,
2026-02-09 12:42:01 (23684): Guest Log:     "pilotErrorDiag": "",
2026-02-09 12:42:01 (23684): Guest Log:  *** Listing of results directory ***
2026-02-09 12:42:01 (23684): Guest Log: total 291912
2026-02-09 12:42:01 (23684): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Feb  9 05:33 pilot3.tar.gz
2026-02-09 12:42:01 (23684): Guest Log: -rwx------. 1 atlas atlas     36322 Feb  9 05:36 runpilot2-wrapper.sh
2026-02-09 12:42:01 (23684): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Feb  9 05:38 queuedata.json
2026-02-09 12:42:01 (23684): Guest Log: -rwxr-xr-x. 1 atlas atlas     12097 Feb  9 13:27 init_data.xml
2026-02-09 12:42:01 (23684): Guest Log: -rwxr-xr-x. 1 atlas atlas    597957 Feb  9 13:27 input.tar.gz
2026-02-09 12:42:01 (23684): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Feb  9 13:27 start_atlas.sh
2026-02-09 12:42:01 (23684): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb  9 13:28 EVNT.48431094._000696.pool.root.1 -> /data/./ATLAS.root_0
2026-02-09 12:42:01 (23684): Guest Log: -rw-r--r--. 1 atlas atlas      2555 Feb  9 13:28 pandaJob.out
2026-02-09 12:42:01 (23684): Guest Log: -rw-------. 1 atlas atlas   1009480 Feb  9 13:29 agis_schedconf.cvmfs.json
2026-02-09 12:42:01 (23684): Guest Log: -rw-------. 1 atlas atlas       427 Feb  9 13:30 workernode_map.json
2026-02-09 12:42:01 (23684): Guest Log: drwx------. 5 atlas atlas      4096 Feb  9 13:30 pilot3
2026-02-09 12:42:01 (23684): Guest Log: -rw-------. 1 atlas atlas 289760094 Feb  9 18:40 HITS.48431096._014097.pool.root.1
2026-02-09 12:42:01 (23684): Guest Log: -rw-------. 1 atlas atlas      1048 Feb  9 18:41 memory_monitor_summary.json
2026-02-09 12:42:01 (23684): Guest Log: -rw-------. 1 atlas atlas   1513144 Feb  9 18:41 agis_ddmendpoints.agis.ALL.json
2026-02-09 12:42:01 (23684): Guest Log: -rw-------. 1 atlas atlas    483244 Feb  9 18:41 log.48431096._014097.job.log.tgz.1
2026-02-09 12:42:01 (23684): Guest Log: -rw-------. 1 atlas atlas      6388 Feb  9 18:41 heartbeat.json
2026-02-09 12:42:01 (23684): Guest Log: -rw-------. 1 atlas atlas        97 Feb  9 18:41 pilot_heartbeat.json
2026-02-09 12:42:01 (23684): Guest Log: -rw-------. 1 atlas atlas       744 Feb  9 18:41 pilotlog.txt
2026-02-09 12:42:01 (23684): Guest Log: -rw-------. 1 atlas atlas   2166592 Feb  9 18:42 log.48431096._014097.job.log.1
2026-02-09 12:42:01 (23684): Guest Log: -rw-------. 1 atlas atlas       357 Feb  9 18:42 output.list
2026-02-09 12:42:01 (23684): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb  9 18:42 runtime_log
2026-02-09 12:42:01 (23684): Guest Log: -rw-------. 1 atlas atlas   2662400 Feb  9 18:42 result.tar.gz
2026-02-09 12:42:01 (23684): Guest Log: -rw-------. 1 atlas atlas       658 Feb  9 18:42 t21MDm07Y98n9Rq4apOajLDm4fhM0noT9bVooX4SDm3neKDmLCbo2m.diag
2026-02-09 12:42:01 (23684): Guest Log: -rw-r--r--. 1 atlas atlas      8746 Feb  9 18:42 runtime_log.err
2026-02-09 12:42:01 (23684): Guest Log: Looking for outputfile HITS.48431096._014097.pool.root.1
2026-02-09 12:42:01 (23684): Guest Log: HITS file was successfully produced
2026-02-09 12:42:01 (23684): Guest Log: -rw-------. 1 atlas atlas 289760094 Feb  9 18:40 /home/atlas/RunAtlas/HITS.48431096._014097.pool.root.1
2026-02-09 12:42:05 (23684): Guest Log: Successfully finished the ATLAS job!
2026-02-09 12:42:05 (23684): Guest Log: Copying the results back to the shared directory!
2026-02-09 12:42:06 (23684): Guest Log:  *** Contents of shared directory: ***
2026-02-09 12:42:06 (23684): Guest Log: total 945668
2026-02-09 12:42:06 (23684): Guest Log: -rwxrwxrwx. 1 root root 675308176 Feb  9 13:26 ATLAS.root_0
2026-02-09 12:42:06 (23684): Guest Log: -rwxrwxrwx. 1 root root 289760094 Feb  9 18:42 HITS.pool.root.1
2026-02-09 12:42:06 (23684): Guest Log: -rwxrwxrwx. 1 root root     12097 Feb  9 13:26 init_data.xml
2026-02-09 12:42:06 (23684): Guest Log: -rwxrwxrwx. 1 root root    597957 Feb  9 12:57 input.tar.gz
2026-02-09 12:42:06 (23684): Guest Log: -rwxrwxrwx. 1 root root   2662400 Feb  9 18:42 result.tar.gz
2026-02-09 12:42:06 (23684): Guest Log: -rwxrwxrwx. 1 root root     15845 Feb  9 12:57 start_atlas.sh
2026-02-09 12:42:06 (23684): Guest Log:  *** Success! Shutting down the machine. ***
2026-02-09 12:42:06 (23684): VM Completion File Detected.
2026-02-09 12:42:06 (23684): Powering off VM.
2026-02-09 12:42:08 (23684): Successfully stopped VM.
2026-02-09 12:42:08 (23684): Deregistering VM. (boinc_0caa6e41c6719f19, slot#23)
2026-02-09 12:42:08 (23684): Removing network bandwidth throttle group from VM.
2026-02-09 12:42:08 (23684): Removing VM from VirtualBox.
2026-02-09 12:42:13 (23684): called boinc_finish(0)

</stderr_txt>
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