Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:42:15 (3793859): wrapper (7.7.26015): starting
07:42:15 (3793859): wrapper: running run_atlas (--nthreads 12)
[2026-02-09 07:42:15] Arguments: --nthreads 12
[2026-02-09 07:42:15] Threads: 12
[2026-02-09 07:42:15] Checking for CVMFS
[2026-02-09 07:42:16] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-09 07:42:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-09 07:42:16] Running cvmfs_config stat atlas.cern.ch
[2026-02-09 07:42:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-09 07:42:17] 2.11.5.0 1525032 101391 257560 156054 1 1015 44831087 45568001 28981 130560 0 878077581 99.833 510678250 19811 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2026-02-09 07:42:17] CVMFS is ok
[2026-02-09 07:42:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-09 07:42:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-09 07:42:17] Further information can be found at the LHC@home message board.
[2026-02-09 07:42:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-09 07:42:17] Checking for apptainer binary...
[2026-02-09 07:42:17] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-09 07:42:17] Running /usr/bin/apptainer --version
[2026-02-09 07:42:17] apptainer version 1.4.1-1.el9
[2026-02-09 07:42:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-09 07:42:18] wns0053.triumf.lcg
[2026-02-09 07:42:18] apptainer works
[2026-02-09 07:42:18] Set ATHENA_PROC_NUMBER=12
[2026-02-09 07:42:18] Set ATHENA_CORE_NUMBER=12
[2026-02-09 07:42:18] Starting ATLAS job with PandaID=7006308452
[2026-02-09 07:42:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-09 07:47:18]  *** The last 200 lines of the pilot log: ***
[2026-02-09 07:47:18] 2026-02-09 15:46:37,561 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-09 07:47:18] 2026-02-09 15:46:37,562 | WARNING  | wrong length of table data, x=[1770651852.0], y=[1789.0] (must be same and length>=4)
[2026-02-09 07:47:18] 2026-02-09 15:46:37,562 | INFO     | could have reported an average CPU frequency of 2783 MHz (4 samples)
[2026-02-09 07:47:18] 2026-02-09 15:46:37,562 | INFO     | ..............................
[2026-02-09 07:47:18] 2026-02-09 15:46:37,562 | INFO     | . Timing measurements:
[2026-02-09 07:47:18] 2026-02-09 15:46:37,562 | INFO     | . get job = 0 s
[2026-02-09 07:47:18] 2026-02-09 15:46:37,562 | INFO     | . initial setup = 23 s
[2026-02-09 07:47:18] 2026-02-09 15:46:37,562 | INFO     | . payload setup = 26 s
[2026-02-09 07:47:18] 2026-02-09 15:46:37,562 | INFO     | . stage-in = 0 s
[2026-02-09 07:47:18] 2026-02-09 15:46:37,562 | INFO     | . payload execution = 38 s
[2026-02-09 07:47:18] 2026-02-09 15:46:37,562 | INFO     | . stage-out = 0 s
[2026-02-09 07:47:18] 2026-02-09 15:46:37,562 | INFO     | . log creation = 0 s
[2026-02-09 07:47:18] 2026-02-09 15:46:37,562 | INFO     | ..............................
[2026-02-09 07:47:18] 2026-02-09 15:46:37,562 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-09 07:47:18] 2026-02-09 15:46:37,562 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7006308452/pilotlog.txt
[2026-02-09 07:47:18] 2026-02-09 15:46:37,705 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-02-09 07:47:18] - Log from pilotlog.txt -
[2026-02-09 07:47:18] 2026-02-09 15:46:37,560 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7006308452/memory_monitor_summary.json (trf name=prmon)
[2026-02-09 07:47:18] 2026-02-09 15:46:37,561 | INFO     | extracted standard info from prmon json
[2026-02-09 07:47:18] 2026-02-09 15:46:37,561 | INFO     | extracted standard memory fields from prmon json
[2026-02-09 07:47:18] 2026-02-09 15:46:37,561 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-09 07:47:18] 2026-02-09 15:46:37,561 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-09 07:47:18] 2026-02-09 15:46:37,561 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-09 07:47:18] 2026-02-09 15:46:37,562 | WARNING  | wrong length of table data, x=[1770651852.0], y=[1789.0] (must be same and length>=4)
[2026-02-09 07:47:18] 2026-02-09 15:46:37,562 | INFO     | could have reported an average CPU frequency of 2783 MHz (4 samples)
[2026-02-09 07:47:18] 2026-02-09 15:46:37,562 | INFO     | ..............................
[2026-02-09 07:47:18] 2026-02-09 15:46:37,562 | INFO     | . Timing measurements:
[2026-02-09 07:47:18] 2026-02-09 15:46:37,562 | INFO     | . get job = 0 s
[2026-02-09 07:47:18] 2026-02-09 15:46:37,562 | INFO     | . initial setup = 23 s
[2026-02-09 07:47:18] 2026-02-09 15:46:37,562 | INFO     | . payload setup = 26 s
[2026-02-09 07:47:18] 2026-02-09 15:46:37,562 | INFO     | . stage-in = 0 s
[2026-02-09 07:47:18] 2026-02-09 15:46:37,562 | INFO     | . payload execution = 38 s
[2026-02-09 07:47:18] 2026-02-09 15:46:37,562 | INFO     | . stage-out = 0 s
[2026-02-09 07:47:18] 2026-02-09 15:46:37,562 | INFO     | . log creation = 0 s
[2026-02-09 07:47:18] 2026-02-09 15:46:37,562 | INFO     | ..............................
[2026-02-09 07:47:18] 2026-02-09 15:46:37,562 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-09 07:47:18] 2026-02-09 15:46:37,562 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7006308452/pilotlog.txt
[2026-02-09 07:47:18] 2026-02-09 15:46:37,706 | WARNING  | 
[2026-02-09 07:47:18] [begin log extracts]
[2026-02-09 07:47:18] - Log from pilotlog.txt -
[2026-02-09 07:47:18] 2026-02-09 15:46:37,560 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7006308452/memory_monitor_summary.json (trf name=prmon)
[2026-02-09 07:47:18] 2026-02-09 15:46:37,561 | INFO     | extracted standard info from prmon json
[2026-02-09 07:47:18] 2026-02-09 15:46:37,561 | INFO     | extracted standard memory fields from prmon json
[2026-02-09 07:47:18] 2026-02-09 15:46:37,561 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-09 07:47:18] 2026-02-09 15:46:37,561 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-09 07:47:18] 2026-02-09 15:46:37,561 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-09 07:47:18] 2026-02-09 15:46:37,562 | WARNING  | wrong length of table data, x=[1770651852.0], y=[1789.0] (must be same and length>=4)
[2026-02-09 07:47:18] 2026-02-09 15:46:37,562 | INFO     | could have reported an average CPU frequency of 2783 MHz (4 samples)
[2026-02-09 07:47:18] 2026-02-09 15:46:37,562 | INFO     | ..............................
[2026-02-09 07:47:18] 2026-02-09 15:46:37,562 | INFO     | . Timing measurements:
[2026-02-09 07:47:18] 2026-02-09 15:46:37,562 | INFO     | . get job = 0 s
[2026-02-09 07:47:18] 2026-02-09 15:46:37,562 | INFO     | . initial setup = 23 s
[2026-02-09 07:47:18] 2026-02-09 15:46:37,562 | INFO     | . payload setup = 26 s
[2026-02-09 07:47:18] 2026-02-09 15:46:37,562 | INFO     | . stage-in = 0 s
[2026-02-09 07:47:18] 2026-02-09 15:46:37,562 | INFO     | . payload execution = 38 s
[2026-02-09 07:47:18] 2026-02-09 15:46:37,562 | INFO     | . stage-out = 0 s
[2026-02-09 07:47:18] 2026-02-09 15:46:37,562 | INFO     | . log creation = 0 s
[2026-02-09 07:47:18] 2026-02-09 15:46:37,562 | INFO     | ..............................
[2026-02-09 07:47:18] 2026-02-09 15:46:37,562 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-09 07:47:18] 2026-02-09 15:46:37,562 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7006308452/pilotlog.txt
[2026-02-09 07:47:18] [end log extracts]
[2026-02-09 07:47:18] 2026-02-09 15:46:37,706 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-02-09 07:47:18] 2026-02-09 15:46:37,706 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-02-09 07:47:18] 2026-02-09 15:46:38,268 | INFO     | 
[2026-02-09 07:47:18] 2026-02-09 15:46:38,268 | INFO     | job summary report
[2026-02-09 07:47:18] 2026-02-09 15:46:38,268 | INFO     | --------------------------------------------------
[2026-02-09 07:47:18] 2026-02-09 15:46:38,268 | INFO     | PanDA job id: 7006308452
[2026-02-09 07:47:18] 2026-02-09 15:46:38,269 | INFO     | task id: 48318018
[2026-02-09 07:47:18] 2026-02-09 15:46:38,269 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-02-09 07:44:25,213 CRITICAL Transform executor raised TransformValidationExceptio
[2026-02-09 07:47:18] 2026-02-09 15:46:38,269 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-09 07:47:18] 2026-02-09 15:46:38,269 | INFO     | pilot state: failed 
[2026-02-09 07:47:18] 2026-02-09 15:46:38,269 | INFO     | transexitcode: 65
[2026-02-09 07:47:18] 2026-02-09 15:46:38,269 | INFO     | exeerrorcode: 65
[2026-02-09 07:47:18] 2026-02-09 15:46:38,269 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-02-09 07:47:18] 2026-02-09 15:46:38,269 | INFO     | exitcode: 65
[2026-02-09 07:47:18] 2026-02-09 15:46:38,269 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-02-09 07:47:18] 2026-02-09 15:46:38,269 | INFO     | cpuconsumptiontime: 13 s
[2026-02-09 07:47:18] 2026-02-09 15:46:38,269 | INFO     | nevents: 0
[2026-02-09 07:47:18] 2026-02-09 15:46:38,269 | INFO     | neventsw: 0
[2026-02-09 07:47:18] 2026-02-09 15:46:38,269 | INFO     | pid: 3802464
[2026-02-09 07:47:18] 2026-02-09 15:46:38,269 | INFO     | pgrp: 3802464
[2026-02-09 07:47:18] 2026-02-09 15:46:38,269 | INFO     | corecount: 12
[2026-02-09 07:47:18] 2026-02-09 15:46:38,269 | INFO     | event service: False
[2026-02-09 07:47:18] 2026-02-09 15:46:38,269 | INFO     | sizes: {0: 2282647, 1: 2282675, 2: 2283136, 13: 2283136, 69: 2306367, 71: 2310659, 74: 2310875, 192: 2311041}
[2026-02-09 07:47:18] 2026-02-09 15:46:38,269 | INFO     | --------------------------------------------------
[2026-02-09 07:47:18] 2026-02-09 15:46:38,269 | INFO     | 
[2026-02-09 07:47:18] 2026-02-09 15:46:38,270 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-02-09 07:47:18] 2026-02-09 15:46:38,384 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-09 07:47:18] 2026-02-09 15:46:38,384 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-09 07:47:18] 2026-02-09 15:46:38,384 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-09 07:47:18] 2026-02-09 15:46:38,385 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-09 07:47:18] 2026-02-09 15:46:38,385 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-09 07:47:18] 2026-02-09 15:46:38,385 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-09 07:47:18] 2026-02-09 15:46:38,385 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-09 07:47:18] 2026-02-09 15:46:38,385 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-09 07:47:18] 2026-02-09 15:46:38,385 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-09 07:47:18] 2026-02-09 15:46:38,385 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-09 07:47:18] 2026-02-09 15:46:38,385 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-09 07:47:18] 2026-02-09 15:46:38,385 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-09 07:47:18] 2026-02-09 15:46:38,385 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-09 07:47:18] 2026-02-09 15:46:38,385 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-09 07:47:18] 2026-02-09 15:46:38,385 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-09 07:47:18] 2026-02-09 15:46:38,385 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-09 07:47:18] 2026-02-09 15:46:38,385 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-09 07:47:18] 2026-02-09 15:46:38,385 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-09 07:47:18] 2026-02-09 15:46:38,385 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-09 07:47:18] 2026-02-09 15:46:38,385 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-09 07:47:18] 2026-02-09 15:46:38,386 | INFO     | job 7006308452 has completed (purged errors)
[2026-02-09 07:47:18] 2026-02-09 15:46:38,386 | INFO     | overall cleanup function is called
[2026-02-09 07:47:18] 2026-02-09 15:46:38,718 | INFO     | PID=3797672 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-09 07:47:18] 2026-02-09 15:46:38,718 | INFO     | .. there are 42 such processes running
[2026-02-09 07:47:18] 2026-02-09 15:46:39,392 | INFO     | --- collectZombieJob: --- 10, [3802464]
[2026-02-09 07:47:18] 2026-02-09 15:46:39,392 | INFO     | zombie collector waiting for pid 3802464
[2026-02-09 07:47:18] 2026-02-09 15:46:39,392 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-09 07:47:18] 2026-02-09 15:46:39,392 | INFO     | collected zombie processes
[2026-02-09 07:47:18] 2026-02-09 15:46:39,392 | INFO     | will attempt to kill all subprocesses of pid=3802464
[2026-02-09 07:47:18] 2026-02-09 15:46:39,740 | INFO     | process IDs to be killed: [3802464] (in reverse order)
[2026-02-09 07:47:18] 2026-02-09 15:46:39,913 | WARNING  | found no corresponding commands to process id(s)
[2026-02-09 07:47:18] 2026-02-09 15:46:39,914 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-09 07:47:18] 2026-02-09 15:46:39,934 | INFO     | did not find any defunct processes belonging to 3802464
[2026-02-09 07:47:18] 2026-02-09 15:46:39,951 | INFO     | did not find any defunct processes belonging to 3802464
[2026-02-09 07:47:18] 2026-02-09 15:46:39,952 | INFO     | ready for new job
[2026-02-09 07:47:18] 2026-02-09 15:46:39,952 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-09 07:47:18] 2026-02-09 15:46:39,953 | INFO     | **************************************
[2026-02-09 07:47:18] 2026-02-09 15:46:39,953 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-09 07:47:18] 2026-02-09 15:46:39,953 | INFO     | **************************************
[2026-02-09 07:47:18] 2026-02-09 15:46:39,953 | INFO     | 
[2026-02-09 07:47:18] 2026-02-09 15:46:39,964 | INFO     | architecture information:
[2026-02-09 07:47:18] 2026-02-09 15:46:39,965 | INFO     | executing command: cat /etc/os-release
[2026-02-09 07:47:18] 2026-02-09 15:46:40,043 | INFO     | cat /etc/os-release:
[2026-02-09 07:47:18] NAME="CentOS Linux"
[2026-02-09 07:47:18] VERSION="7 (Core)"
[2026-02-09 07:47:18] ID="centos"
[2026-02-09 07:47:18] ID_LIKE="rhel fedora"
[2026-02-09 07:47:18] VERSION_ID="7"
[2026-02-09 07:47:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-09 07:47:18] ANSI_COLOR="0;31"
[2026-02-09 07:47:18] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-09 07:47:18] HOME_URL="https://www.centos.org/"
[2026-02-09 07:47:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-09 07:47:18] 
[2026-02-09 07:47:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-09 07:47:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-09 07:47:18] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-09 07:47:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-09 07:47:18] 
[2026-02-09 07:47:18] 2026-02-09 15:46:40,043 | INFO     | **************************************
[2026-02-09 07:47:18] 2026-02-09 15:46:40,547 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-02-09 07:47:18] 2026-02-09 15:46:40,627 | INFO     | sufficient remaining disk space (2012217344000 B)
[2026-02-09 07:47:18] 2026-02-09 15:46:40,627 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-09 07:47:18] 2026-02-09 15:46:40,628 | INFO     | current server update state: UPDATING_FINAL
[2026-02-09 07:47:18] 2026-02-09 15:46:40,628 | INFO     | update_server=False
[2026-02-09 07:47:18] 2026-02-09 15:46:40,628 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-09 07:47:18] 2026-02-09 15:46:40,635 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-09 07:47:18] 2026-02-09 15:46:40,635 | INFO     | aborting loop
[2026-02-09 07:47:18] 2026-02-09 15:46:40,919 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-09 07:47:18] 2026-02-09 15:46:40,974 | INFO     | all job control threads have been joined
[2026-02-09 07:47:18] 2026-02-09 15:46:41,402 | INFO     | all data control threads have been joined
[2026-02-09 07:47:18] 2026-02-09 15:46:41,634 | INFO     | [job] retrieve thread has finished
[2026-02-09 07:47:18] 2026-02-09 15:46:41,641 | INFO     | [job] job monitor thread has finished
[2026-02-09 07:47:18] 2026-02-09 15:46:41,803 | INFO     | [payload] failed_post thread has finished
[2026-02-09 07:47:18] 2026-02-09 15:46:41,980 | INFO     | [job] control thread has finished
[2026-02-09 07:47:18] 2026-02-09 15:46:42,007 | INFO     | [job] create_data_payload thread has finished
[2026-02-09 07:47:18] 2026-02-09 15:46:42,073 | INFO     | all payload control threads have been joined
[2026-02-09 07:47:18] 2026-02-09 15:46:42,415 | INFO     | [data] control thread has finished
[2026-02-09 07:47:18] 2026-02-09 15:46:42,442 | INFO     | [payload] validate_post thread has finished
[2026-02-09 07:47:18] 2026-02-09 15:46:42,566 | INFO     | [payload] validate_pre thread has finished
[2026-02-09 07:47:18] 2026-02-09 15:46:42,605 | INFO     | [job] validate thread has finished
[2026-02-09 07:47:18] 2026-02-09 15:46:42,675 | INFO     | [payload] execute_payloads thread has finished
[2026-02-09 07:47:18] 2026-02-09 15:46:42,814 | INFO     | [data] copytool_in thread has finished
[2026-02-09 07:47:18] 2026-02-09 15:46:42,926 | INFO     | [data] copytool_out thread has finished
[2026-02-09 07:47:18] 2026-02-09 15:46:43,005 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-09 07:47:18] 2026-02-09 15:46:43,079 | INFO     | [payload] control thread has finished
[2026-02-09 07:47:18] 2026-02-09 15:46:43,297 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-09 07:47:18] 2026-02-09 15:46:43,831 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-09 07:47:18] 2026-02-09 15:46:44,303 | INFO     | [job] queue monitor thread has finished
[2026-02-09 07:47:18] 2026-02-09 15:46:47,840 | INFO     | [data] queue_monitor thread has finished
[2026-02-09 07:47:18] 2026-02-09 15:47:11,456 | INFO     | PID=3797672 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-09 07:47:18] 2026-02-09 15:47:11,456 | INFO     | .. there are 42 such processes running
[2026-02-09 07:47:18] 2026-02-09 15:47:11,457 | INFO     | found 0 job(s) in 20 queues
[2026-02-09 07:47:18] 2026-02-09 15:47:11,457 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-09 07:47:18] 2026-02-09 15:47:11,457 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-09 07:47:18] 2026-02-09 15:47:12,244 | INFO     | [monitor] cgroup control has ended
[2026-02-09 07:47:18] 2026-02-09 15:47:12,582 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139747516303168)>', '<ExcThread(monitor, started 139747120883456)>']
[2026-02-09 07:47:18] 2026-02-09 15:47:13,468 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-09 07:47:18] 2026-02-09 15:47:13,468 | INFO     | [monitor] control thread has ended
[2026-02-09 07:47:18] 2026-02-09 15:47:17,608 | INFO     | all workflow threads have been joined
[2026-02-09 07:47:18] 2026-02-09 15:47:17,608 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-09 07:47:18] 2026-02-09 15:47:17,608 | INFO     | traces error code: 0
[2026-02-09 07:47:18] 2026-02-09 15:47:17,608 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-09 07:47:18] 2026-02-09 15:47:17,879 [wrapper] ==== pilot stdout END ====
[2026-02-09 07:47:18] 2026-02-09 15:47:17,881 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-09 07:47:18] 2026-02-09 15:47:17,882 [wrapper] pilotpid: 3797672
[2026-02-09 07:47:18] 2026-02-09 15:47:17,884 [wrapper] Pilot exit status: 0
[2026-02-09 07:47:18] 2026-02-09 15:47:17,892 [wrapper] pandaids: 7006308452
[2026-02-09 07:47:18] 2026-02-09 15:47:17,989 [wrapper] cleanup supervisor_pilot 3797678 3797673
[2026-02-09 07:47:18] 2026-02-09 15:47:17,994 [wrapper] Test setup, not cleaning
[2026-02-09 07:47:18] 2026-02-09 15:47:17,996 [wrapper] apfmon messages muted
[2026-02-09 07:47:18] 2026-02-09 15:47:18,006 [wrapper] ==== wrapper stdout END ====
[2026-02-09 07:47:18] 2026-02-09 15:47:18,016 [wrapper] ==== wrapper stderr END ====
[2026-02-09 07:47:18]  *** Error codes and diagnostics ***
[2026-02-09 07:47:18]     "exeErrorCode": 65,
[2026-02-09 07:47:18]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-02-09 07:47:18]     "pilotErrorCode": 1305,
[2026-02-09 07:47:18]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-02-09 07:47:18]  *** Listing of results directory ***
[2026-02-09 07:47:18] total 484312
[2026-02-09 07:47:18] -rw-r--r--. 1 boinc boinc    584627 Feb  9 03:10 pilot3.tar.gz
[2026-02-09 07:47:18] -rwx------. 1 boinc boinc     36322 Feb  9 03:11 runpilot2-wrapper.sh
[2026-02-09 07:47:18] -rw-r--r--. 1 boinc boinc      5111 Feb  9 03:11 queuedata.json
[2026-02-09 07:47:18] -rw-r--r--. 1 boinc boinc       100 Feb  9 07:42 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-09 07:47:18] -rwxr-xr-x. 1 boinc boinc      7986 Feb  9 07:42 run_atlas
[2026-02-09 07:47:18] -rw-r--r--. 1 boinc boinc       105 Feb  9 07:42 job.xml
[2026-02-09 07:47:18] -rw-r--r--. 2 boinc boinc 491784803 Feb  9 07:42 EVNT.48318016._000109.pool.root.1
[2026-02-09 07:47:18] -rw-r--r--. 1 boinc boinc      6593 Feb  9 07:42 init_data.xml
[2026-02-09 07:47:18] -rw-r--r--. 2 boinc boinc     15845 Feb  9 07:42 start_atlas.sh
[2026-02-09 07:47:18] drwxrwx--x. 2 boinc boinc      4096 Feb  9 07:42 shared
[2026-02-09 07:47:18] -rw-r--r--. 2 boinc boinc    597939 Feb  9 07:42 input.tar.gz
[2026-02-09 07:47:18] -rw-r--r--. 1 boinc boinc         0 Feb  9 07:42 boinc_lockfile
[2026-02-09 07:47:18] -rw-r--r--. 1 boinc boinc      2519 Feb  9 07:42 pandaJob.out
[2026-02-09 07:47:18] -rw-------. 1 boinc boinc   1009480 Feb  9 07:42 agis_schedconf.cvmfs.json
[2026-02-09 07:47:18] -rw-------. 1 boinc boinc   1513144 Feb  9 07:42 agis_ddmendpoints.agis.ALL.json
[2026-02-09 07:47:18] -rw-------. 1 boinc boinc       445 Feb  9 07:43 workernode_map.json
[2026-02-09 07:47:18] drwx------. 5 boinc boinc      4096 Feb  9 07:43 pilot3
[2026-02-09 07:47:18] -rw-------. 1 boinc boinc       972 Feb  9 07:44 memory_monitor_summary.json
[2026-02-09 07:47:18] -rw-------. 1 boinc boinc     21353 Feb  9 07:44 log.48318018._005496.job.log.tgz.1
[2026-02-09 07:47:18] -rw-------. 1 boinc boinc      7008 Feb  9 07:46 heartbeat.json
[2026-02-09 07:47:18] -rw-------. 1 boinc boinc        95 Feb  9 07:47 pilot_heartbeat.json
[2026-02-09 07:47:18] -rw-r--r--. 1 boinc boinc      8192 Feb  9 07:47 boinc_mmap_file
[2026-02-09 07:47:18] -rw-r--r--. 1 boinc boinc        22 Feb  9 07:47 wrapper_checkpoint.txt
[2026-02-09 07:47:18] -rw-r--r--. 1 boinc boinc       524 Feb  9 07:47 boinc_task_state.xml
[2026-02-09 07:47:18] -rw-------. 1 boinc boinc      4819 Feb  9 07:47 pilotlog.txt
[2026-02-09 07:47:18] -rw-------. 1 boinc boinc     86988 Feb  9 07:47 log.48318018._005496.job.log.1
[2026-02-09 07:47:18] -rw-------. 1 boinc boinc       188 Feb  9 07:47 output.list
[2026-02-09 07:47:18] -rw-r--r--. 1 boinc boinc       620 Feb  9 07:47 runtime_log
[2026-02-09 07:47:18] -rw-------. 1 boinc boinc    122880 Feb  9 07:47 result.tar.gz
[2026-02-09 07:47:18] -rw-------. 1 boinc boinc       643 Feb  9 07:47 Vm9MDmeLe98nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm7hfKDmBVvlVm.diag
[2026-02-09 07:47:18] -rw-r--r--. 1 boinc boinc      8635 Feb  9 07:47 runtime_log.err
[2026-02-09 07:47:18] -rw-r--r--. 1 boinc boinc     21915 Feb  9 07:47 stderr.txt
[2026-02-09 07:47:18] No HITS result produced
[2026-02-09 07:47:18]  *** Contents of shared directory: ***
[2026-02-09 07:47:18] total 480984
[2026-02-09 07:47:18] -rw-r--r--. 2 boinc boinc 491784803 Feb  9 07:42 ATLAS.root_0
[2026-02-09 07:47:18] -rw-r--r--. 2 boinc boinc     15845 Feb  9 07:42 start_atlas.sh
[2026-02-09 07:47:18] -rw-r--r--. 2 boinc boinc    597939 Feb  9 07:42 input.tar.gz
[2026-02-09 07:47:18] -rw-------. 1 boinc boinc    122880 Feb  9 07:47 result.tar.gz
07:47:19 (3793859): run_atlas exited; CPU time 21.848730
07:47:19 (3793859): called boinc_finish(0)

</stderr_txt>
]]>

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