Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:03:32 (13564): wrapper (7.7.26015): starting
21:03:32 (13564): wrapper: running run_atlas (--nthreads 8)
[2026-02-09 21:03:32] Arguments: --nthreads 8
[2026-02-09 21:03:32] Threads: 8
[2026-02-09 21:03:32] Checking for CVMFS
[2026-02-09 21:03:33] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-09 21:03:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-09 21:03:37] Running cvmfs_config stat atlas.cern.ch
[2026-02-09 21:03:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-09 21:03:38] 2.11.2.0 4021 80493 105568 156063 3 53 22001387 25165825 4830 130560 0 32526011 99.855 24687116 3345 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-02-09 21:03:38] CVMFS is ok
[2026-02-09 21:03:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-09 21:03:38] Checking for apptainer binary...
[2026-02-09 21:03:38] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-09 21:03:38] Running /usr/bin/apptainer --version
[2026-02-09 21:03:38] apptainer version 1.3.2-1.el7
[2026-02-09 21:03:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-09 21:03:42] cg-vwn448.simple-grid.lan
[2026-02-09 21:03:42] apptainer works
[2026-02-09 21:03:42] Set ATHENA_PROC_NUMBER=8
[2026-02-09 21:03:42] Set ATHENA_CORE_NUMBER=8
[2026-02-09 21:03:42] Starting ATLAS job with PandaID=7006174993
[2026-02-09 21:03:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/26 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-10 01:32:37]  *** The last 200 lines of the pilot log: ***
[2026-02-10 01:32:37] 2026-02-10 00:31:28,679 | INFO     | using path: /var/lib/boinc/slots/26/PanDA_Pilot-7006174993/memory_monitor_summary.json (trf name=prmon)
[2026-02-10 01:32:37] 2026-02-10 00:31:28,680 | INFO     | extracted standard info from prmon json
[2026-02-10 01:32:37] 2026-02-10 00:31:28,680 | INFO     | extracted standard memory fields from prmon json
[2026-02-10 01:32:37] 2026-02-10 00:31:28,680 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-10 01:32:37] 2026-02-10 00:31:28,680 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-10 01:32:37] 2026-02-10 00:31:28,681 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-10 01:32:37] 2026-02-10 00:31:28,686 | INFO     | fitting pss+swap vs Time
[2026-02-10 01:32:37] 2026-02-10 00:31:28,687 | INFO     | sum of square deviations: 5081276667.5
[2026-02-10 01:32:37] 2026-02-10 00:31:28,689 | INFO     | sum of deviations: 18169447403.49999
[2026-02-10 01:32:37] 2026-02-10 00:31:28,689 | INFO     | mean x: 1770675718.5
[2026-02-10 01:32:37] 2026-02-10 00:31:28,690 | INFO     | mean y: 2491478.81496063
[2026-02-10 01:32:37] 2026-02-10 00:31:28,690 | INFO     | intersect: -6329027436.837608
[2026-02-10 01:32:37] 2026-02-10 00:31:28,690 | INFO     | chi2: 6.107607351923648
[2026-02-10 01:32:37] 2026-02-10 00:31:28,691 | INFO     | sum of square deviations: 4787066500.0
[2026-02-10 01:32:37] 2026-02-10 00:31:28,693 | INFO     | sum of deviations: 34874377649.00002
[2026-02-10 01:32:37] 2026-02-10 00:31:28,693 | INFO     | mean x: 1770675566.0
[2026-02-10 01:32:37] 2026-02-10 00:31:28,693 | INFO     | mean y: 2499998.0923694777
[2026-02-10 01:32:37] 2026-02-10 00:31:28,693 | INFO     | intersect: -12897092765.563799
[2026-02-10 01:32:37] 2026-02-10 00:31:28,694 | INFO     | chi2: 5.383503108079924
[2026-02-10 01:32:37] 2026-02-10 00:31:28,694 | INFO     | current chi2=5.383503108079924 (change=11.8557759548125 %)
[2026-02-10 01:32:37] 2026-02-10 00:31:28,694 | INFO     | right removable region: 248
[2026-02-10 01:32:37] 2026-02-10 00:31:28,698 | INFO     | sum of square deviations: 4787066500.0
[2026-02-10 01:32:37] 2026-02-10 00:31:28,700 | INFO     | sum of deviations: -69257738725.99985
[2026-02-10 01:32:37] 2026-02-10 00:31:28,700 | INFO     | mean x: 1770675871.0
[2026-02-10 01:32:37] 2026-02-10 00:31:28,700 | INFO     | mean y: 2536761.502008032
[2026-02-10 01:32:37] 2026-02-10 00:31:28,700 | INFO     | intersect: 25620105859.852783
[2026-02-10 01:32:37] 2026-02-10 00:31:28,701 | INFO     | chi2: 1.6034869575965955
[2026-02-10 01:32:37] 2026-02-10 00:31:28,701 | INFO     | current chi2=1.6034869575965955 (change=73.74607002050382 %)
[2026-02-10 01:32:37] 2026-02-10 00:31:28,701 | INFO     | sum of square deviations: 4504437945.0
[2026-02-10 01:32:37] 2026-02-10 00:31:28,703 | INFO     | sum of deviations: -91837088928.0
[2026-02-10 01:32:37] 2026-02-10 00:31:28,703 | INFO     | mean x: 1770676023.5
[2026-02-10 01:32:37] 2026-02-10 00:31:28,703 | INFO     | mean y: 2548837.475409836
[2026-02-10 01:32:37] 2026-02-10 00:31:28,703 | INFO     | intersect: 36103330648.30063
[2026-02-10 01:32:37] 2026-02-10 00:31:28,704 | INFO     | chi2: 1.039127214089841
[2026-02-10 01:32:37] 2026-02-10 00:31:28,704 | INFO     | current chi2=1.039127214089841 (change=35.19578009868265 %)
[2026-02-10 01:32:37] 2026-02-10 00:31:28,704 | INFO     | sum of square deviations: 4233158440.0
[2026-02-10 01:32:37] 2026-02-10 00:31:28,707 | INFO     | sum of deviations: -87811295596.00005
[2026-02-10 01:32:37] 2026-02-10 00:31:28,707 | INFO     | mean x: 1770676176.0
[2026-02-10 01:32:37] 2026-02-10 00:31:28,707 | INFO     | mean y: 2546551.648535565
[2026-02-10 01:32:37] 2026-02-10 00:31:28,707 | INFO     | intersect: 36732891351.95585
[2026-02-10 01:32:37] 2026-02-10 00:31:28,707 | INFO     | chi2: 1.0291400642216135
[2026-02-10 01:32:37] 2026-02-10 00:31:28,713 | INFO     | current chi2=1.0291400642216135 (change=0.961109451548259 %)
[2026-02-10 01:32:37] 2026-02-10 00:31:28,713 | INFO     | left removable region: 30
[2026-02-10 01:32:37] 2026-02-10 00:31:28,713 | INFO     | sum of square deviations: 3212467674.5
[2026-02-10 01:32:37] 2026-02-10 00:31:28,715 | INFO     | sum of deviations: -48130970086.5
[2026-02-10 01:32:37] 2026-02-10 00:31:28,715 | INFO     | mean x: 1770676450.5
[2026-02-10 01:32:37] 2026-02-10 00:31:28,715 | INFO     | mean y: 2543005.1055045873
[2026-02-10 01:32:37] 2026-02-10 00:31:28,716 | INFO     | intersect: 26531798364.896828
[2026-02-10 01:32:37] 2026-02-10 00:31:28,716 | INFO     | chi2: 0.21466630110246293
[2026-02-10 01:32:37] 2026-02-10 00:31:28,717 | INFO     | current memory leak: -14.98 B/s (using 218 data points, chi2=0.21)
[2026-02-10 01:32:37] 2026-02-10 00:31:28,717 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2026-02-10 01:32:37] 2026-02-10 00:31:28,717 | INFO     | ..............................
[2026-02-10 01:32:37] 2026-02-10 00:31:28,718 | INFO     | . Timing measurements:
[2026-02-10 01:32:37] 2026-02-10 00:31:28,718 | INFO     | . get job = 0 s
[2026-02-10 01:32:37] 2026-02-10 00:31:28,718 | INFO     | . initial setup = 102 s
[2026-02-10 01:32:37] 2026-02-10 00:31:28,718 | INFO     | . payload setup = 136 s
[2026-02-10 01:32:37] 2026-02-10 00:31:28,718 | INFO     | . stage-in = 0 s
[2026-02-10 01:32:37] 2026-02-10 00:31:28,718 | INFO     | . payload execution = 15585 s
[2026-02-10 01:32:37] 2026-02-10 00:31:28,718 | INFO     | . stage-out = 3 s
[2026-02-10 01:32:37] 2026-02-10 00:31:28,718 | INFO     | . log creation = 1 s
[2026-02-10 01:32:37] 2026-02-10 00:31:28,718 | INFO     | ..............................
[2026-02-10 01:32:37] 2026-02-10 00:31:28,856 | INFO     | 
[2026-02-10 01:32:37] 2026-02-10 00:31:28,856 | INFO     | job summary report
[2026-02-10 01:32:37] 2026-02-10 00:31:28,856 | INFO     | --------------------------------------------------
[2026-02-10 01:32:37] 2026-02-10 00:31:28,856 | INFO     | PanDA job id: 7006174993
[2026-02-10 01:32:37] 2026-02-10 00:31:28,856 | INFO     | task id: 48318018
[2026-02-10 01:32:37] 2026-02-10 00:31:28,856 | INFO     | errors: (none)
[2026-02-10 01:32:37] 2026-02-10 00:31:28,857 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-10 01:32:37] 2026-02-10 00:31:28,857 | INFO     | pilot state: finished 
[2026-02-10 01:32:37] 2026-02-10 00:31:28,857 | INFO     | transexitcode: 0
[2026-02-10 01:32:37] 2026-02-10 00:31:28,857 | INFO     | exeerrorcode: 0
[2026-02-10 01:32:37] 2026-02-10 00:31:28,857 | INFO     | exeerrordiag: 
[2026-02-10 01:32:37] 2026-02-10 00:31:28,857 | INFO     | exitcode: 0
[2026-02-10 01:32:37] 2026-02-10 00:31:28,857 | INFO     | exitmsg: OK
[2026-02-10 01:32:37] 2026-02-10 00:31:28,857 | INFO     | cpuconsumptiontime: 59298 s
[2026-02-10 01:32:37] 2026-02-10 00:31:28,857 | INFO     | nevents: 400
[2026-02-10 01:32:37] 2026-02-10 00:31:28,858 | INFO     | neventsw: 0
[2026-02-10 01:32:37] 2026-02-10 00:31:28,858 | INFO     | pid: 22180
[2026-02-10 01:32:37] 2026-02-10 00:31:28,858 | INFO     | pgrp: 22180
[2026-02-10 01:32:37] 2026-02-10 00:31:28,858 | INFO     | corecount: 8
[2026-02-10 01:32:37] 2026-02-10 00:31:28,858 | INFO     | event service: False
[2026-02-10 01:32:37] 2026-02-10 00:31:28,858 | INFO     | sizes: {0: 2281995, 1: 2282681, 2: 2283142, 13: 2283142, 15725: 2314253, 15730: 2323253, 15733: 2323437, 15735: 2323631}
[2026-02-10 01:32:37] 2026-02-10 00:31:28,858 | INFO     | --------------------------------------------------
[2026-02-10 01:32:37] 2026-02-10 00:31:28,858 | INFO     | 
[2026-02-10 01:32:37] 2026-02-10 00:31:28,859 | INFO     | executing command: ls -lF /var/lib/boinc/slots/26
[2026-02-10 01:32:37] 2026-02-10 00:31:29,136 | INFO     | PID=17661 has CPU usage=8.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-10 01:32:37] 2026-02-10 00:31:29,136 | INFO     | .. there are 9 such processes running
[2026-02-10 01:32:37] 2026-02-10 00:31:29,341 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-10 01:32:37] 2026-02-10 00:31:29,341 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-10 01:32:37] 2026-02-10 00:31:29,341 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-10 01:32:37] 2026-02-10 00:31:29,342 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-10 01:32:37] 2026-02-10 00:31:29,342 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-10 01:32:37] 2026-02-10 00:31:29,342 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-10 01:32:37] 2026-02-10 00:31:29,342 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-10 01:32:37] 2026-02-10 00:31:29,342 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-10 01:32:37] 2026-02-10 00:31:29,342 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-10 01:32:37] 2026-02-10 00:31:29,342 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-10 01:32:37] 2026-02-10 00:31:29,343 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-10 01:32:37] 2026-02-10 00:31:29,343 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-10 01:32:37] 2026-02-10 00:31:29,343 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-10 01:32:37] 2026-02-10 00:31:29,343 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-10 01:32:37] 2026-02-10 00:31:29,343 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-10 01:32:37] 2026-02-10 00:31:29,343 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-10 01:32:37] 2026-02-10 00:31:29,343 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-10 01:32:37] 2026-02-10 00:31:29,344 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-10 01:32:37] 2026-02-10 00:31:29,344 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-10 01:32:37] 2026-02-10 00:31:29,344 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-10 01:32:37] 2026-02-10 00:31:29,344 | INFO     | job 7006174993 has completed (purged errors)
[2026-02-10 01:32:37] 2026-02-10 00:31:29,344 | INFO     | overall cleanup function is called
[2026-02-10 01:32:37] 2026-02-10 00:31:30,353 | INFO     | --- collectZombieJob: --- 10, [22180]
[2026-02-10 01:32:37] 2026-02-10 00:31:30,353 | INFO     | zombie collector waiting for pid 22180
[2026-02-10 01:32:37] 2026-02-10 00:31:30,353 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-10 01:32:37] 2026-02-10 00:31:30,353 | INFO     | collected zombie processes
[2026-02-10 01:32:37] 2026-02-10 00:31:30,353 | INFO     | will attempt to kill all subprocesses of pid=22180
[2026-02-10 01:32:37] 2026-02-10 00:31:30,481 | INFO     | process IDs to be killed: [22180] (in reverse order)
[2026-02-10 01:32:37] 2026-02-10 00:31:31,380 | WARNING  | found no corresponding commands to process id(s)
[2026-02-10 01:32:37] 2026-02-10 00:31:31,380 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-10 01:32:37] 2026-02-10 00:31:31,384 | INFO     | did not find any defunct processes belonging to 22180
[2026-02-10 01:32:37] 2026-02-10 00:31:31,386 | INFO     | did not find any defunct processes belonging to 22180
[2026-02-10 01:32:37] 2026-02-10 00:31:31,387 | INFO     | ready for new job
[2026-02-10 01:32:37] 2026-02-10 00:31:31,387 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-10 01:32:37] 2026-02-10 00:31:31,389 | INFO     | **************************************
[2026-02-10 01:32:37] 2026-02-10 00:31:31,389 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-10 01:32:37] 2026-02-10 00:31:31,389 | INFO     | **************************************
[2026-02-10 01:32:37] 2026-02-10 00:31:31,389 | INFO     | 
[2026-02-10 01:32:37] 2026-02-10 00:31:31,390 | INFO     | pilot is running in a VM
[2026-02-10 01:32:37] 2026-02-10 00:31:31,390 | INFO     | architecture information:
[2026-02-10 01:32:37] 2026-02-10 00:31:31,394 | INFO     | executing command: cat /etc/os-release
[2026-02-10 01:32:37] 2026-02-10 00:31:31,608 | INFO     | cat /etc/os-release:
[2026-02-10 01:32:37] NAME="CentOS Linux"
[2026-02-10 01:32:37] VERSION="7 (Core)"
[2026-02-10 01:32:37] ID="centos"
[2026-02-10 01:32:37] ID_LIKE="rhel fedora"
[2026-02-10 01:32:37] VERSION_ID="7"
[2026-02-10 01:32:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-10 01:32:37] ANSI_COLOR="0;31"
[2026-02-10 01:32:37] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-10 01:32:37] HOME_URL="https://www.centos.org/"
[2026-02-10 01:32:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-10 01:32:37] 
[2026-02-10 01:32:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-10 01:32:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-10 01:32:37] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-10 01:32:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-10 01:32:37] 
[2026-02-10 01:32:37] 2026-02-10 00:31:31,608 | INFO     | **************************************
[2026-02-10 01:32:37] 2026-02-10 00:31:32,112 | INFO     | executing command: df -mP /var/lib/boinc/slots/26
[2026-02-10 01:32:37] 2026-02-10 00:31:32,338 | INFO     | sufficient remaining disk space (495755198464 B)
[2026-02-10 01:32:37] 2026-02-10 00:31:32,339 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-10 01:32:37] 2026-02-10 00:31:32,339 | INFO     | current server update state: UPDATING_FINAL
[2026-02-10 01:32:37] 2026-02-10 00:31:32,339 | INFO     | update_server=False
[2026-02-10 01:32:37] 2026-02-10 00:31:32,339 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-10 01:32:37] 2026-02-10 00:31:32,340 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-10 01:32:37] 2026-02-10 00:31:32,345 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-10 01:32:37] 2026-02-10 00:31:32,345 | INFO     | aborting loop
[2026-02-10 01:32:37] 2026-02-10 00:31:32,345 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-10 01:32:37] 2026-02-10 00:31:32,554 | INFO     | all payload control threads have been joined
[2026-02-10 01:32:37] 2026-02-10 00:31:32,946 | INFO     | all job control threads have been joined
[2026-02-10 01:32:37] 2026-02-10 00:31:33,055 | INFO     | all data control threads have been joined
[2026-02-10 01:32:37] 2026-02-10 00:31:33,345 | INFO     | [job] retrieve thread has finished
[2026-02-10 01:32:37] 2026-02-10 00:31:33,351 | INFO     | [job] job monitor thread has finished
[2026-02-10 01:32:37] 2026-02-10 00:31:33,560 | INFO     | [payload] control thread has finished
[2026-02-10 01:32:37] 2026-02-10 00:31:33,572 | INFO     | [payload] execute_payloads thread has finished
[2026-02-10 01:32:37] 2026-02-10 00:31:33,641 | INFO     | [job] create_data_payload thread has finished
[2026-02-10 01:32:37] 2026-02-10 00:31:33,735 | INFO     | [data] copytool_in thread has finished
[2026-02-10 01:32:37] 2026-02-10 00:31:33,870 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-10 01:32:37] 2026-02-10 00:31:33,952 | INFO     | [job] control thread has finished
[2026-02-10 01:32:37] 2026-02-10 00:31:34,061 | INFO     | [data] control thread has finished
[2026-02-10 01:32:37] 2026-02-10 00:31:34,352 | INFO     | [data] copytool_out thread has finished
[2026-02-10 01:32:37] 2026-02-10 00:31:34,432 | INFO     | [payload] failed_post thread has finished
[2026-02-10 01:32:37] 2026-02-10 00:31:34,453 | INFO     | [job] validate thread has finished
[2026-02-10 01:32:37] 2026-02-10 00:31:34,604 | INFO     | [payload] validate_post thread has finished
[2026-02-10 01:32:37] 2026-02-10 00:31:34,720 | INFO     | [payload] validate_pre thread has finished
[2026-02-10 01:32:37] 2026-02-10 00:31:34,876 | INFO     | [job] queue monitor thread has finished
[2026-02-10 01:32:37] 2026-02-10 00:31:36,349 | INFO     | [data] queue_monitor thread has finished
[2026-02-10 01:32:37] 2026-02-10 00:31:43,267 | INFO     | job.realtimelogging is not enabled
[2026-02-10 01:32:37] 2026-02-10 00:31:44,273 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-10 01:32:37] 2026-02-10 00:32:01,347 | INFO     | PID=17661 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-10 01:32:37] 2026-02-10 00:32:01,347 | INFO     | .. there are 9 such processes running
[2026-02-10 01:32:37] 2026-02-10 00:32:01,348 | INFO     | found 0 job(s) in 20 queues
[2026-02-10 01:32:37] 2026-02-10 00:32:01,348 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-10 01:32:37] 2026-02-10 00:32:01,348 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-10 01:32:37] 2026-02-10 00:32:27,267 | INFO     | [monitor] cgroup control has ended
[2026-02-10 01:32:37] 2026-02-10 00:32:27,916 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140192975775552)>', '<ExcThread(monitor, started 140192514021120)>']
[2026-02-10 01:32:37] 2026-02-10 00:32:28,510 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-10 01:32:37] 2026-02-10 00:32:28,510 | INFO     | [monitor] control thread has ended
[2026-02-10 01:32:37] 2026-02-10 00:32:32,942 | INFO     | all workflow threads have been joined
[2026-02-10 01:32:37] 2026-02-10 00:32:32,942 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-10 01:32:37] 2026-02-10 00:32:32,942 | INFO     | traces error code: 0
[2026-02-10 01:32:37] 2026-02-10 00:32:32,942 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-10 01:32:37] 2026-02-10 00:32:33,228 [wrapper] ==== pilot stdout END ====
[2026-02-10 01:32:37] 2026-02-10 00:32:33,308 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-10 01:32:37] 2026-02-10 00:32:33,384 [wrapper] pilotpid: 17661
[2026-02-10 01:32:37] 2026-02-10 00:32:33,494 [wrapper] Pilot exit status: 0
[2026-02-10 01:32:37] 2026-02-10 00:32:33,919 [wrapper] pandaids: 7006174993
[2026-02-10 01:32:37] 2026-02-10 00:32:34,876 [wrapper] cleanup supervisor_pilot 29459 17662
[2026-02-10 01:32:37] 2026-02-10 00:32:34,924 [wrapper] Test setup, not cleaning
[2026-02-10 01:32:37] 2026-02-10 00:32:35,025 [wrapper] apfmon messages muted
[2026-02-10 01:32:37] 2026-02-10 00:32:35,077 [wrapper] ==== wrapper stdout END ====
[2026-02-10 01:32:37] 2026-02-10 00:32:35,115 [wrapper] ==== wrapper stderr END ====
[2026-02-10 01:32:37]  *** Error codes and diagnostics ***
[2026-02-10 01:32:37]     "exeErrorCode": 0,
[2026-02-10 01:32:37]     "exeErrorDiag": "",
[2026-02-10 01:32:37]     "pilotErrorCode": 0,
[2026-02-10 01:32:37]     "pilotErrorDiag": "",
[2026-02-10 01:32:37]  *** Listing of results directory ***
[2026-02-10 01:32:37] total 674704
[2026-02-10 01:32:37] -rw-r--r--. 1 boinc boinc    584627 Feb  9 04:56 pilot3.tar.gz
[2026-02-10 01:32:37] -rwx------. 1 boinc boinc     36322 Feb  9 04:57 runpilot2-wrapper.sh
[2026-02-10 01:32:37] -rw-r--r--. 1 boinc boinc      5111 Feb  9 04:59 queuedata.json
[2026-02-10 01:32:37] -rw-r--r--. 1 boinc boinc       100 Feb  9 21:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-10 01:32:37] -rwxr-xr-x. 1 boinc boinc      7986 Feb  9 21:03 run_atlas
[2026-02-10 01:32:37] -rw-r--r--. 1 boinc boinc       105 Feb  9 21:03 job.xml
[2026-02-10 01:32:37] -rw-r--r--. 1 boinc boinc      6392 Feb  9 21:03 init_data.xml
[2026-02-10 01:32:37] -rw-r--r--. 2 boinc boinc 500877151 Feb  9 21:03 EVNT.48318016._000092.pool.root.1
[2026-02-10 01:32:37] -rw-r--r--. 2 boinc boinc     15845 Feb  9 21:03 start_atlas.sh
[2026-02-10 01:32:37] drwxrwx--x. 2 boinc boinc        68 Feb  9 21:03 shared
[2026-02-10 01:32:37] -rw-r--r--. 2 boinc boinc    597951 Feb  9 21:03 input.tar.gz
[2026-02-10 01:32:37] -rw-r--r--. 1 boinc boinc         0 Feb  9 21:03 boinc_lockfile
[2026-02-10 01:32:37] -rw-r--r--. 1 boinc boinc      2520 Feb  9 21:03 pandaJob.out
[2026-02-10 01:32:37] -rw-------. 1 boinc boinc       415 Feb  9 21:08 workernode_map.json
[2026-02-10 01:32:37] -rw-------. 1 boinc boinc   1009496 Feb  9 21:09 agis_schedconf.cvmfs.json
[2026-02-10 01:32:37] drwx------. 5 boinc boinc      4096 Feb  9 21:09 pilot3
[2026-02-10 01:32:37] -rw-------. 1 boinc boinc 180740236 Feb 10 01:29 HITS.48318018._004658.pool.root.1
[2026-02-10 01:32:37] -rw-r--r--. 1 boinc boinc       532 Feb 10 01:30 boinc_task_state.xml
[2026-02-10 01:32:37] -rw-------. 1 boinc boinc      1016 Feb 10 01:31 memory_monitor_summary.json
[2026-02-10 01:32:37] -rw-------. 1 boinc boinc   1513144 Feb 10 01:31 agis_ddmendpoints.agis.ALL.json
[2026-02-10 01:32:37] -rw-------. 1 boinc boinc    482177 Feb 10 01:31 log.48318018._004658.job.log.tgz.1
[2026-02-10 01:32:37] -rw-------. 1 boinc boinc      6321 Feb 10 01:31 heartbeat.json
[2026-02-10 01:32:37] -rw-------. 1 boinc boinc        95 Feb 10 01:31 pilot_heartbeat.json
[2026-02-10 01:32:37] -rw-r--r--. 1 boinc boinc      8192 Feb 10 01:32 boinc_mmap_file
[2026-02-10 01:32:37] -rw-r--r--. 1 boinc boinc        28 Feb 10 01:32 wrapper_checkpoint.txt
[2026-02-10 01:32:37] -rw-------. 1 boinc boinc      4953 Feb 10 01:32 pilotlog.txt
[2026-02-10 01:32:37] -rw-------. 1 boinc boinc   2192504 Feb 10 01:32 log.48318018._004658.job.log.1
[2026-02-10 01:32:37] -rw-------. 1 boinc boinc       357 Feb 10 01:32 output.list
[2026-02-10 01:32:37] -rw-r--r--. 1 boinc boinc       620 Feb 10 01:32 runtime_log
[2026-02-10 01:32:37] -rw-------. 1 boinc boinc   2693120 Feb 10 01:32 result.tar.gz
[2026-02-10 01:32:37] -rw-r--r--. 1 boinc boinc      8832 Feb 10 01:32 runtime_log.err
[2026-02-10 01:32:37] -rw-------. 1 boinc boinc       656 Feb 10 01:32 dTaMDm7ZX98n9Rq4apOajLDm4fhM0noT9bVooX4SDmvUeKDmIGtvUm.diag
[2026-02-10 01:32:37] -rw-r--r--. 1 boinc boinc     20801 Feb 10 01:32 stderr.txt
[2026-02-10 01:32:37] HITS file was successfully produced:
[2026-02-10 01:32:37] -rw-------. 1 boinc boinc 180740236 Feb 10 01:29 shared/HITS.pool.root.1
[2026-02-10 01:32:37]  *** Contents of shared directory: ***
[2026-02-10 01:32:37] total 668880
[2026-02-10 01:32:37] -rw-r--r--. 2 boinc boinc 500877151 Feb  9 21:03 ATLAS.root_0
[2026-02-10 01:32:37] -rw-r--r--. 2 boinc boinc     15845 Feb  9 21:03 start_atlas.sh
[2026-02-10 01:32:37] -rw-r--r--. 2 boinc boinc    597951 Feb  9 21:03 input.tar.gz
[2026-02-10 01:32:37] -rw-------. 1 boinc boinc 180740236 Feb 10 01:29 HITS.pool.root.1
[2026-02-10 01:32:37] -rw-------. 1 boinc boinc   2693120 Feb 10 01:32 result.tar.gz
01:32:39 (13564): run_atlas exited; CPU time 59534.978541
01:32:39 (13564): called boinc_finish(0)

</stderr_txt>
]]>

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