Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
12:54:43 (2458065): wrapper (7.7.26015): starting
12:54:43 (2458065): wrapper: running run_atlas (--nthreads 4)
[2026-02-09 12:54:43] Arguments: --nthreads 4
[2026-02-09 12:54:43] Threads: 4
[2026-02-09 12:54:43] Checking for CVMFS
[2026-02-09 12:54:43] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-09 12:54:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-09 12:54:49] Running cvmfs_config stat atlas.cern.ch
[2026-02-09 12:54:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-09 12:54:49] 2.13.3.0 832320 4956 52904 156061 1 50 3963400 6144001 6454 130560 0 11590730 99.997 175212 1025 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://192.168.1.30:3128 1
[2026-02-09 12:54:49] CVMFS is ok
[2026-02-09 12:54:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-09 12:54:49] Checking for apptainer binary...
[2026-02-09 12:54:49] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-09 12:54:49] Running /usr/bin/apptainer --version
[2026-02-09 12:54:49] apptainer version 1.4.5
[2026-02-09 12:54:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-09 12:54:50] Starfish-Cruncher
[2026-02-09 12:54:50] apptainer works
[2026-02-09 12:54:50] Set ATHENA_PROC_NUMBER=4
[2026-02-09 12:54:50] Set ATHENA_CORE_NUMBER=4
[2026-02-09 12:54:50] Starting ATLAS job with PandaID=7008496070
[2026-02-09 12:54:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-09 16:01:30]  *** The last 200 lines of the pilot log: ***
[2026-02-09 16:01:30] 2026-02-09 22:00:27,889 | INFO     | intersect: -14744616291.319351
[2026-02-09 16:01:30] 2026-02-09 22:00:27,889 | INFO     | chi2: 1.257729504614983
[2026-02-09 16:01:30] 2026-02-09 22:00:27,889 | INFO     | current chi2=1.257729504614983 (change=-0.07128576524473404 %)
[2026-02-09 16:01:30] 2026-02-09 22:00:27,889 | INFO     | right removable region: 176
[2026-02-09 16:01:30] 2026-02-09 22:00:27,889 | INFO     | sum of square deviations: 1719429448.0
[2026-02-09 16:01:30] 2026-02-09 22:00:27,890 | INFO     | sum of deviations: -2043248802.0000007
[2026-02-09 16:01:30] 2026-02-09 22:00:27,890 | INFO     | mean x: 1770668998.0
[2026-02-09 16:01:30] 2026-02-09 22:00:27,890 | INFO     | mean y: 2355785.7514124294
[2026-02-09 16:01:30] 2026-02-09 22:00:27,891 | INFO     | intersect: 2106494058.5431912
[2026-02-09 16:01:30] 2026-02-09 22:00:27,891 | INFO     | chi2: 0.028047293964829897
[2026-02-09 16:01:30] 2026-02-09 22:00:27,891 | INFO     | current chi2=0.028047293964829897 (change=97.76841621429918 %)
[2026-02-09 16:01:30] 2026-02-09 22:00:27,891 | INFO     | sum of square deviations: 1577789583.0
[2026-02-09 16:01:30] 2026-02-09 22:00:27,892 | INFO     | sum of deviations: 1896946981.5
[2026-02-09 16:01:30] 2026-02-09 22:00:27,892 | INFO     | mean x: 1770669150.5
[2026-02-09 16:01:30] 2026-02-09 22:00:27,892 | INFO     | mean y: 2351538.343023256
[2026-02-09 16:01:30] 2026-02-09 22:00:27,892 | INFO     | intersect: -2126490948.9356775
[2026-02-09 16:01:30] 2026-02-09 22:00:27,892 | INFO     | chi2: 0.008344852006134511
[2026-02-09 16:01:30] 2026-02-09 22:00:27,892 | INFO     | current chi2=0.008344852006134511 (change=70.24721166826791 %)
[2026-02-09 16:01:30] 2026-02-09 22:00:27,893 | INFO     | sum of square deviations: 1444149868.0
[2026-02-09 16:01:30] 2026-02-09 22:00:27,893 | INFO     | sum of deviations: 3367869048.0000005
[2026-02-09 16:01:30] 2026-02-09 22:00:27,893 | INFO     | mean x: 1770669303.0
[2026-02-09 16:01:30] 2026-02-09 22:00:27,893 | INFO     | mean y: 2349887.508982036
[2026-02-09 16:01:30] 2026-02-09 22:00:27,893 | INFO     | intersect: -4126987705.4626603
[2026-02-09 16:01:30] 2026-02-09 22:00:27,894 | INFO     | chi2: 0.00038460318147579697
[2026-02-09 16:01:30] 2026-02-09 22:00:27,894 | INFO     | current chi2=0.00038460318147579697 (change=95.3911323868528 %)
[2026-02-09 16:01:30] 2026-02-09 22:00:27,894 | INFO     | sum of square deviations: 1318277740.5
[2026-02-09 16:01:30] 2026-02-09 22:00:27,894 | INFO     | sum of deviations: 2811340732.9999995
[2026-02-09 16:01:30] 2026-02-09 22:00:27,895 | INFO     | mean x: 1770669455.5
[2026-02-09 16:01:30] 2026-02-09 22:00:27,895 | INFO     | mean y: 2350561.7407407407
[2026-02-09 16:01:30] 2026-02-09 22:00:27,895 | INFO     | intersect: -3773754436.4655004
[2026-02-09 16:01:30] 2026-02-09 22:00:27,895 | INFO     | chi2: 0.0002746655027957707
[2026-02-09 16:01:30] 2026-02-09 22:00:27,895 | INFO     | current chi2=0.0002746655027957707 (change=28.58470339693346 %)
[2026-02-09 16:01:30] 2026-02-09 22:00:27,895 | INFO     | sum of square deviations: 1199940638.0
[2026-02-09 16:01:30] 2026-02-09 22:00:27,896 | INFO     | sum of deviations: 2358092249.999999
[2026-02-09 16:01:30] 2026-02-09 22:00:27,896 | INFO     | mean x: 1770669608.0
[2026-02-09 16:01:30] 2026-02-09 22:00:27,896 | INFO     | mean y: 2351144.9872611463
[2026-02-09 16:01:30] 2026-02-09 22:00:27,896 | INFO     | intersect: -3477322888.6338387
[2026-02-09 16:01:30] 2026-02-09 22:00:27,896 | INFO     | chi2: 0.00020326080818540754
[2026-02-09 16:01:30] 2026-02-09 22:00:27,896 | INFO     | current chi2=0.00020326080818540754 (change=25.99696499325456 %)
[2026-02-09 16:01:30] 2026-02-09 22:00:27,896 | INFO     | sum of square deviations: 1088905998.0
[2026-02-09 16:01:30] 2026-02-09 22:00:27,897 | INFO     | sum of deviations: 2023070276.5000002
[2026-02-09 16:01:30] 2026-02-09 22:00:27,897 | INFO     | mean x: 1770669760.5
[2026-02-09 16:01:30] 2026-02-09 22:00:27,897 | INFO     | mean y: 2351604.2697368423
[2026-02-09 16:01:30] 2026-02-09 22:00:27,897 | INFO     | intersect: -3287362446.8461103
[2026-02-09 16:01:30] 2026-02-09 22:00:27,897 | INFO     | chi2: 0.00017420787121046413
[2026-02-09 16:01:30] 2026-02-09 22:00:27,897 | INFO     | current chi2=0.00017420787121046413 (change=14.29342785474036 %)
[2026-02-09 16:01:30] 2026-02-09 22:00:27,897 | INFO     | left removable region: 60
[2026-02-09 16:01:30] 2026-02-09 22:00:27,898 | INFO     | sum of square deviations: 483971865.0
[2026-02-09 16:01:30] 2026-02-09 22:00:27,898 | INFO     | sum of deviations: 592025251.9999999
[2026-02-09 16:01:30] 2026-02-09 22:00:27,898 | INFO     | mean x: 1770670492.5
[2026-02-09 16:01:30] 2026-02-09 22:00:27,898 | INFO     | mean y: 2353657.620689655
[2026-02-09 16:01:30] 2026-02-09 22:00:27,898 | INFO     | intersect: -2163643418.534298
[2026-02-09 16:01:30] 2026-02-09 22:00:27,898 | INFO     | chi2: 2.737624038680882e-05
[2026-02-09 16:01:30] 2026-02-09 22:00:27,898 | INFO     | current memory leak: 1.22 B/s (using 116 data points, chi2=0.00)
[2026-02-09 16:01:30] 2026-02-09 22:00:27,899 | INFO     | could have reported an average CPU frequency of 3600 MHz (10 samples)
[2026-02-09 16:01:30] 2026-02-09 22:00:27,899 | INFO     | ..............................
[2026-02-09 16:01:30] 2026-02-09 22:00:27,899 | INFO     | . Timing measurements:
[2026-02-09 16:01:30] 2026-02-09 22:00:27,899 | INFO     | . get job = 0 s
[2026-02-09 16:01:30] 2026-02-09 22:00:27,899 | INFO     | . initial setup = 5 s
[2026-02-09 16:01:30] 2026-02-09 22:00:27,899 | INFO     | . payload setup = 4 s
[2026-02-09 16:01:30] 2026-02-09 22:00:27,899 | INFO     | . stage-in = 0 s
[2026-02-09 16:01:30] 2026-02-09 22:00:27,899 | INFO     | . payload execution = 11094 s
[2026-02-09 16:01:30] 2026-02-09 22:00:27,899 | INFO     | . stage-out = 2 s
[2026-02-09 16:01:30] 2026-02-09 22:00:27,899 | INFO     | . log creation = 0 s
[2026-02-09 16:01:30] 2026-02-09 22:00:27,899 | INFO     | ..............................
[2026-02-09 16:01:30] 2026-02-09 22:00:27,965 | INFO     | 
[2026-02-09 16:01:30] 2026-02-09 22:00:27,965 | INFO     | job summary report
[2026-02-09 16:01:30] 2026-02-09 22:00:27,965 | INFO     | --------------------------------------------------
[2026-02-09 16:01:30] 2026-02-09 22:00:27,965 | INFO     | PanDA job id: 7008496070
[2026-02-09 16:01:30] 2026-02-09 22:00:27,965 | INFO     | task id: 48431096
[2026-02-09 16:01:30] 2026-02-09 22:00:27,965 | INFO     | errors: (none)
[2026-02-09 16:01:30] 2026-02-09 22:00:27,965 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-09 16:01:30] 2026-02-09 22:00:27,965 | INFO     | pilot state: finished 
[2026-02-09 16:01:30] 2026-02-09 22:00:27,965 | INFO     | transexitcode: 0
[2026-02-09 16:01:30] 2026-02-09 22:00:27,965 | INFO     | exeerrorcode: 0
[2026-02-09 16:01:30] 2026-02-09 22:00:27,965 | INFO     | exeerrordiag: 
[2026-02-09 16:01:30] 2026-02-09 22:00:27,965 | INFO     | exitcode: 0
[2026-02-09 16:01:30] 2026-02-09 22:00:27,966 | INFO     | exitmsg: OK
[2026-02-09 16:01:30] 2026-02-09 22:00:27,966 | INFO     | cpuconsumptiontime: 42814 s
[2026-02-09 16:01:30] 2026-02-09 22:00:27,966 | INFO     | nevents: 400
[2026-02-09 16:01:30] 2026-02-09 22:00:27,966 | INFO     | neventsw: 0
[2026-02-09 16:01:30] 2026-02-09 22:00:27,966 | INFO     | pid: 2467132
[2026-02-09 16:01:30] 2026-02-09 22:00:27,966 | INFO     | pgrp: 2467132
[2026-02-09 16:01:30] 2026-02-09 22:00:27,966 | INFO     | corecount: 4
[2026-02-09 16:01:30] 2026-02-09 22:00:27,966 | INFO     | event service: False
[2026-02-09 16:01:30] 2026-02-09 22:00:27,966 | INFO     | sizes: {0: 2283093, 11: 2283093, 11102: 2312450, 11103: 2312449, 11105: 2321517, 11108: 2321573, 11111: 2321895}
[2026-02-09 16:01:30] 2026-02-09 22:00:27,966 | INFO     | --------------------------------------------------
[2026-02-09 16:01:30] 2026-02-09 22:00:27,966 | INFO     | 
[2026-02-09 16:01:30] 2026-02-09 22:00:27,966 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/6
[2026-02-09 16:01:30] 2026-02-09 22:00:27,982 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-09 16:01:30] 2026-02-09 22:00:27,982 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-09 16:01:30] 2026-02-09 22:00:27,982 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-09 16:01:30] 2026-02-09 22:00:27,982 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-09 16:01:30] 2026-02-09 22:00:27,982 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-09 16:01:30] 2026-02-09 22:00:27,982 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-09 16:01:30] 2026-02-09 22:00:27,982 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-09 16:01:30] 2026-02-09 22:00:27,982 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-09 16:01:30] 2026-02-09 22:00:27,983 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-09 16:01:30] 2026-02-09 22:00:27,983 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-09 16:01:30] 2026-02-09 22:00:27,983 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-09 16:01:30] 2026-02-09 22:00:27,983 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-09 16:01:30] 2026-02-09 22:00:27,983 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-09 16:01:30] 2026-02-09 22:00:27,983 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-09 16:01:30] 2026-02-09 22:00:27,983 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-09 16:01:30] 2026-02-09 22:00:27,983 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-09 16:01:30] 2026-02-09 22:00:27,983 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-09 16:01:30] 2026-02-09 22:00:27,983 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-09 16:01:30] 2026-02-09 22:00:27,983 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-09 16:01:30] 2026-02-09 22:00:27,983 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-09 16:01:30] 2026-02-09 22:00:27,983 | INFO     | job 7008496070 has completed (purged errors)
[2026-02-09 16:01:30] 2026-02-09 22:00:27,983 | INFO     | overall cleanup function is called
[2026-02-09 16:01:30] 2026-02-09 22:00:28,990 | INFO     | --- collectZombieJob: --- 10, [2467132]
[2026-02-09 16:01:30] 2026-02-09 22:00:28,990 | INFO     | zombie collector waiting for pid 2467132
[2026-02-09 16:01:30] 2026-02-09 22:00:28,990 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-09 16:01:30] 2026-02-09 22:00:28,991 | INFO     | collected zombie processes
[2026-02-09 16:01:30] 2026-02-09 22:00:28,991 | INFO     | will attempt to kill all subprocesses of pid=2467132
[2026-02-09 16:01:30] 2026-02-09 22:00:29,160 | INFO     | process IDs to be killed: [2467132] (in reverse order)
[2026-02-09 16:01:30] 2026-02-09 22:00:29,222 | WARNING  | found no corresponding commands to process id(s)
[2026-02-09 16:01:30] 2026-02-09 22:00:29,223 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-09 16:01:30] 2026-02-09 22:00:29,227 | INFO     | did not find any defunct processes belonging to 2467132
[2026-02-09 16:01:30] 2026-02-09 22:00:29,231 | INFO     | did not find any defunct processes belonging to 2467132
[2026-02-09 16:01:30] 2026-02-09 22:00:29,231 | INFO     | ready for new job
[2026-02-09 16:01:30] 2026-02-09 22:00:29,232 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-09 16:01:30] 2026-02-09 22:00:29,233 | INFO     | **************************************
[2026-02-09 16:01:30] 2026-02-09 22:00:29,233 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-09 16:01:30] 2026-02-09 22:00:29,233 | INFO     | **************************************
[2026-02-09 16:01:30] 2026-02-09 22:00:29,233 | INFO     | 
[2026-02-09 16:01:30] 2026-02-09 22:00:29,235 | INFO     | architecture information:
[2026-02-09 16:01:30] 2026-02-09 22:00:29,235 | INFO     | executing command: cat /etc/os-release
[2026-02-09 16:01:30] 2026-02-09 22:00:29,248 | INFO     | cat /etc/os-release:
[2026-02-09 16:01:30] NAME="CentOS Linux"
[2026-02-09 16:01:30] VERSION="7 (Core)"
[2026-02-09 16:01:30] ID="centos"
[2026-02-09 16:01:30] ID_LIKE="rhel fedora"
[2026-02-09 16:01:30] VERSION_ID="7"
[2026-02-09 16:01:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-09 16:01:30] ANSI_COLOR="0;31"
[2026-02-09 16:01:30] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-09 16:01:30] HOME_URL="https://www.centos.org/"
[2026-02-09 16:01:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-09 16:01:30] 
[2026-02-09 16:01:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-09 16:01:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-09 16:01:30] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-09 16:01:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-09 16:01:30] 
[2026-02-09 16:01:30] 2026-02-09 22:00:29,248 | INFO     | **************************************
[2026-02-09 16:01:30] 2026-02-09 22:00:29,751 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/6
[2026-02-09 16:01:30] 2026-02-09 22:00:29,764 | INFO     | sufficient remaining disk space (1791035965440 B)
[2026-02-09 16:01:30] 2026-02-09 22:00:29,765 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-09 16:01:30] 2026-02-09 22:00:29,765 | INFO     | current server update state: UPDATING_FINAL
[2026-02-09 16:01:30] 2026-02-09 22:00:29,765 | INFO     | update_server=False
[2026-02-09 16:01:30] 2026-02-09 22:00:29,765 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-09 16:01:30] 2026-02-09 22:00:29,765 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-09 16:01:30] 2026-02-09 22:00:29,765 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-09 16:01:30] 2026-02-09 22:00:29,765 | INFO     | aborting loop
[2026-02-09 16:01:30] 2026-02-09 22:00:29,776 | INFO     | all data control threads have been joined
[2026-02-09 16:01:30] 2026-02-09 22:00:30,339 | INFO     | all job control threads have been joined
[2026-02-09 16:01:30] 2026-02-09 22:00:30,598 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-09 16:01:30] 2026-02-09 22:00:30,770 | INFO     | [job] retrieve thread has finished
[2026-02-09 16:01:30] 2026-02-09 22:00:30,770 | INFO     | [job] queue monitor thread has finished
[2026-02-09 16:01:30] 2026-02-09 22:00:30,771 | INFO     | [job] job monitor thread has finished
[2026-02-09 16:01:30] 2026-02-09 22:00:30,781 | INFO     | [data] control thread has finished
[2026-02-09 16:01:30] 2026-02-09 22:00:30,872 | INFO     | all payload control threads have been joined
[2026-02-09 16:01:30] 2026-02-09 22:00:30,947 | INFO     | [data] copytool_in thread has finished
[2026-02-09 16:01:30] 2026-02-09 22:00:31,036 | INFO     | [payload] execute_payloads thread has finished
[2026-02-09 16:01:30] 2026-02-09 22:00:31,345 | INFO     | [job] control thread has finished
[2026-02-09 16:01:30] 2026-02-09 22:00:31,468 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-09 16:01:30] 2026-02-09 22:00:31,715 | INFO     | [payload] failed_post thread has finished
[2026-02-09 16:01:30] 2026-02-09 22:00:31,796 | INFO     | [job] validate thread has finished
[2026-02-09 16:01:30] 2026-02-09 22:00:31,876 | INFO     | [payload] control thread has finished
[2026-02-09 16:01:30] 2026-02-09 22:00:31,916 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-09 16:01:30] 2026-02-09 22:00:32,026 | INFO     | [job] create_data_payload thread has finished
[2026-02-09 16:01:30] 2026-02-09 22:00:32,033 | INFO     | [payload] validate_pre thread has finished
[2026-02-09 16:01:30] 2026-02-09 22:00:32,344 | INFO     | [payload] validate_post thread has finished
[2026-02-09 16:01:30] 2026-02-09 22:00:32,603 | INFO     | [data] copytool_out thread has finished
[2026-02-09 16:01:30] 2026-02-09 22:00:35,473 | INFO     | [data] queue_monitor thread has finished
[2026-02-09 16:01:30] 2026-02-09 22:01:00,874 | INFO     | PID=2462392 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-09 16:01:30] 2026-02-09 22:01:00,874 | INFO     | .. there are 8 such processes running
[2026-02-09 16:01:30] 2026-02-09 22:01:00,874 | INFO     | found 0 job(s) in 20 queues
[2026-02-09 16:01:30] 2026-02-09 22:01:00,874 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-09 16:01:30] 2026-02-09 22:01:00,875 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-09 16:01:30] 2026-02-09 22:01:23,946 | INFO     | [monitor] cgroup control has ended
[2026-02-09 16:01:30] 2026-02-09 22:01:25,353 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 123492153009984)>', '<ExcThread(monitor, started 123491870586624)>']
[2026-02-09 16:01:30] 2026-02-09 22:01:25,989 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-09 16:01:30] 2026-02-09 22:01:25,989 | INFO     | [monitor] control thread has ended
[2026-02-09 16:01:30] 2026-02-09 22:01:30,374 | INFO     | all workflow threads have been joined
[2026-02-09 16:01:30] 2026-02-09 22:01:30,374 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-09 16:01:30] 2026-02-09 22:01:30,374 | INFO     | traces error code: 0
[2026-02-09 16:01:30] 2026-02-09 22:01:30,374 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-09 16:01:30] 2026-02-09 22:01:30,462 [wrapper] ==== pilot stdout END ====
[2026-02-09 16:01:30] 2026-02-09 22:01:30,464 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-09 16:01:30] 2026-02-09 22:01:30,466 [wrapper] pilotpid: 2462392
[2026-02-09 16:01:30] 2026-02-09 22:01:30,469 [wrapper] Pilot exit status: 0
[2026-02-09 16:01:30] 2026-02-09 22:01:30,477 [wrapper] pandaids: 7008496070
[2026-02-09 16:01:30] 2026-02-09 22:01:30,516 [wrapper] cleanup supervisor_pilot 2655145 2462393
[2026-02-09 16:01:30] 2026-02-09 22:01:30,519 [wrapper] Test setup, not cleaning
[2026-02-09 16:01:30] 2026-02-09 22:01:30,521 [wrapper] apfmon messages muted
[2026-02-09 16:01:30] 2026-02-09 22:01:30,524 [wrapper] ==== wrapper stdout END ====
[2026-02-09 16:01:30] 2026-02-09 22:01:30,526 [wrapper] ==== wrapper stderr END ====
[2026-02-09 16:01:30]  *** Error codes and diagnostics ***
[2026-02-09 16:01:30]     "exeErrorCode": 0,
[2026-02-09 16:01:30]     "exeErrorDiag": "",
[2026-02-09 16:01:30]     "pilotErrorCode": 0,
[2026-02-09 16:01:30]     "pilotErrorDiag": "",
[2026-02-09 16:01:30]  *** Listing of results directory ***
[2026-02-09 16:01:30] total 937388
[2026-02-09 16:01:30] -rw-r--r-- 1 boinc boinc    584627 Feb  8 19:56 pilot3.tar.gz
[2026-02-09 16:01:30] -rwx------ 1 boinc boinc     36322 Feb  8 19:57 runpilot2-wrapper.sh
[2026-02-09 16:01:30] -rw-r--r-- 1 boinc boinc      5111 Feb  8 19:59 queuedata.json
[2026-02-09 16:01:30] -rw-r--r-- 1 boinc boinc       100 Feb  9 12:54 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-09 16:01:30] -rwxr-xr-x 1 boinc boinc      7986 Feb  9 12:54 run_atlas
[2026-02-09 16:01:30] -rw-r--r-- 1 boinc boinc       105 Feb  9 12:54 job.xml
[2026-02-09 16:01:30] -rw-r--r-- 2 boinc boinc 677145611 Feb  9 12:54 EVNT.48431094._000607.pool.root.1
[2026-02-09 16:01:30] -rw-r--r-- 2 boinc boinc     15845 Feb  9 12:54 start_atlas.sh
[2026-02-09 16:01:30] drwxrwx--x 2 boinc boinc      4096 Feb  9 12:54 shared
[2026-02-09 16:01:30] -rw-r--r-- 2 boinc boinc    597962 Feb  9 12:54 input.tar.gz
[2026-02-09 16:01:30] -rw-r--r-- 1 boinc boinc      9665 Feb  9 12:54 init_data.xml
[2026-02-09 16:01:30] -rw-r--r-- 1 boinc boinc         0 Feb  9 12:54 boinc_lockfile
[2026-02-09 16:01:30] -rw-r--r-- 1 boinc boinc      2556 Feb  9 12:54 pandaJob.out
[2026-02-09 16:01:30] -rw------- 1 boinc boinc   1009496 Feb  9 12:55 agis_schedconf.cvmfs.json
[2026-02-09 16:01:30] -rw------- 1 boinc boinc       433 Feb  9 12:55 workernode_map.json
[2026-02-09 16:01:30] drwx------ 5 boinc boinc      4096 Feb  9 12:55 pilot3
[2026-02-09 16:01:30] -rw------- 1 boinc boinc 274817607 Feb  9 15:59 HITS.48431096._013547.pool.root.1
[2026-02-09 16:01:30] -rw-r--r-- 1 boinc boinc       531 Feb  9 15:59 boinc_task_state.xml
[2026-02-09 16:01:30] -rw------- 1 boinc boinc      1027 Feb  9 16:00 memory_monitor_summary.json
[2026-02-09 16:01:30] -rw------- 1 boinc boinc   1513144 Feb  9 16:00 agis_ddmendpoints.agis.ALL.json
[2026-02-09 16:01:30] -rw------- 1 boinc boinc    385570 Feb  9 16:00 log.48431096._013547.job.log.tgz.1
[2026-02-09 16:01:30] -rw------- 1 boinc boinc      6322 Feb  9 16:00 heartbeat.json
[2026-02-09 16:01:30] -rw------- 1 boinc boinc        95 Feb  9 16:01 pilot_heartbeat.json
[2026-02-09 16:01:30] -rw-r--r-- 1 boinc boinc      8192 Feb  9 16:01 boinc_mmap_file
[2026-02-09 16:01:30] -rw-r--r-- 1 boinc boinc        28 Feb  9 16:01 wrapper_checkpoint.txt
[2026-02-09 16:01:30] -rw------- 1 boinc boinc      4828 Feb  9 16:01 pilotlog.txt
[2026-02-09 16:01:30] -rw------- 1 boinc boinc   1601147 Feb  9 16:01 log.48431096._013547.job.log.1
[2026-02-09 16:01:30] -rw------- 1 boinc boinc       357 Feb  9 16:01 output.list
[2026-02-09 16:01:30] -rw-r--r-- 1 boinc boinc       620 Feb  9 16:01 runtime_log
[2026-02-09 16:01:30] -rw------- 1 boinc boinc   2007040 Feb  9 16:01 result.tar.gz
[2026-02-09 16:01:30] -rw-r--r-- 1 boinc boinc      8933 Feb  9 16:01 runtime_log.err
[2026-02-09 16:01:30] -rw------- 1 boinc boinc       655 Feb  9 16:01 PphLDmFiV98n9Rq4apOajLDm4fhM0noT9bVooX4SDmKJeKDmh5EkPo.diag
[2026-02-09 16:01:30] -rw-r--r-- 1 boinc boinc     20688 Feb  9 16:01 stderr.txt
[2026-02-09 16:01:30] HITS file was successfully produced:
[2026-02-09 16:01:30] -rw------- 1 boinc boinc 274817607 Feb  9 15:59 shared/HITS.pool.root.1
[2026-02-09 16:01:30]  *** Contents of shared directory: ***
[2026-02-09 16:01:30] total 932224
[2026-02-09 16:01:30] -rw-r--r-- 2 boinc boinc 677145611 Feb  9 12:54 ATLAS.root_0
[2026-02-09 16:01:30] -rw-r--r-- 2 boinc boinc     15845 Feb  9 12:54 start_atlas.sh
[2026-02-09 16:01:30] -rw-r--r-- 2 boinc boinc    597962 Feb  9 12:54 input.tar.gz
[2026-02-09 16:01:30] -rw------- 1 boinc boinc 274817607 Feb  9 15:59 HITS.pool.root.1
[2026-02-09 16:01:30] -rw------- 1 boinc boinc   2007040 Feb  9 16:01 result.tar.gz
16:01:32 (2458065): run_atlas exited; CPU time 42990.524539
16:01:32 (2458065): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN