Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
18:41:22 (551732): wrapper (7.7.26015): starting
18:41:22 (551732): wrapper: running run_atlas (--nthreads 3)
[2026-02-09 18:41:22] Arguments: --nthreads 3
[2026-02-09 18:41:22] Threads: 3
[2026-02-09 18:41:22] Checking for CVMFS
[2026-02-09 18:41:23] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-09 18:41:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-09 18:41:23] Running cvmfs_config stat atlas.cern.ch
[2026-02-09 18:41:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-09 18:41:24] 2.9.2.0 4008882 4962 83812 156060 0 49 36443385 36864001 0 130560 0 2087618 99.984 178448 6302 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-09 18:41:24] CVMFS is ok
[2026-02-09 18:41:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-09 18:41:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-09 18:41:24] Further information can be found at the LHC@home message board.
[2026-02-09 18:41:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-09 18:41:24] Checking for apptainer binary...
[2026-02-09 18:41:24] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-09 18:41:24] Running /usr/bin/apptainer --version
[2026-02-09 18:41:24] apptainer version 1.4.1-1.1
[2026-02-09 18:41:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-09 18:41:24] belleA263b
[2026-02-09 18:41:24] apptainer works
[2026-02-09 18:41:24] Set ATHENA_PROC_NUMBER=3
[2026-02-09 18:41:24] Set ATHENA_CORE_NUMBER=3
[2026-02-09 18:41:24] Starting ATLAS job with PandaID=7008495976
[2026-02-09 18:41:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-09 20:40:03]  *** The last 200 lines of the pilot log: ***
[2026-02-09 20:40:03] 2026-02-09 19:39:31,222 | INFO     | this job has now completed (state=finished)
[2026-02-09 20:40:03] 2026-02-09 19:39:31,222 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-09 20:40:03] 2026-02-09 19:39:31,222 | INFO     | log transfer has been attempted: DONE
[2026-02-09 20:40:03] 2026-02-09 19:39:31,222 | INFO     | job 7008495976 has finished - writing final server update
[2026-02-09 20:40:03] 2026-02-09 19:39:31,222 | INFO     | total number of processed events: 400 (read)
[2026-02-09 20:40:03] 2026-02-09 19:39:31,223 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-7008495976/memory_monitor_summary.json (trf name=prmon)
[2026-02-09 20:40:03] 2026-02-09 19:39:31,223 | INFO     | extracted standard info from prmon json
[2026-02-09 20:40:03] 2026-02-09 19:39:31,223 | INFO     | extracted standard memory fields from prmon json
[2026-02-09 20:40:03] 2026-02-09 19:39:31,223 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-09 20:40:03] 2026-02-09 19:39:31,223 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-09 20:40:03] 2026-02-09 19:39:31,223 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-09 20:40:03] 2026-02-09 19:39:31,224 | INFO     | fitting pss+swap vs Time
[2026-02-09 20:40:03] 2026-02-09 19:39:31,224 | INFO     | sum of square deviations: 483971865.0
[2026-02-09 20:40:03] 2026-02-09 19:39:31,224 | INFO     | sum of deviations: -7207577213.5
[2026-02-09 20:40:03] 2026-02-09 19:39:31,224 | INFO     | mean x: 1770662419.5
[2026-02-09 20:40:03] 2026-02-09 19:39:31,224 | INFO     | mean y: 2425658.75
[2026-02-09 20:40:03] 2026-02-09 19:39:31,224 | INFO     | intersect: 26372111647.80843
[2026-02-09 20:40:03] 2026-02-09 19:39:31,224 | INFO     | chi2: 1.6790160564756447
[2026-02-09 20:40:03] 2026-02-09 19:39:31,224 | INFO     | sum of square deviations: 424045160.0
[2026-02-09 20:40:03] 2026-02-09 19:39:31,225 | INFO     | sum of deviations: -6539052624.000003
[2026-02-09 20:40:03] 2026-02-09 19:39:31,225 | INFO     | mean x: 1770662267.0
[2026-02-09 20:40:03] 2026-02-09 19:39:31,225 | INFO     | mean y: 2427361.027027027
[2026-02-09 20:40:03] 2026-02-09 19:39:31,225 | INFO     | intersect: 27307193068.63266
[2026-02-09 20:40:03] 2026-02-09 19:39:31,225 | INFO     | chi2: 1.6773387415480614
[2026-02-09 20:40:03] 2026-02-09 19:39:31,225 | INFO     | current chi2=1.6773387415480614 (change=0.09989868298841988 %)
[2026-02-09 20:40:03] 2026-02-09 19:39:31,225 | INFO     | right removable region: 110
[2026-02-09 20:40:03] 2026-02-09 19:39:31,225 | INFO     | sum of square deviations: 424045160.0
[2026-02-09 20:40:03] 2026-02-09 19:39:31,225 | INFO     | sum of deviations: -22451376533.0
[2026-02-09 20:40:03] 2026-02-09 19:39:31,225 | INFO     | mean x: 1770662572.0
[2026-02-09 20:40:03] 2026-02-09 19:39:31,225 | INFO     | mean y: 2463475.6576576577
[2026-02-09 20:40:03] 2026-02-09 19:39:31,225 | INFO     | intersect: 93751469163.78348
[2026-02-09 20:40:03] 2026-02-09 19:39:31,225 | INFO     | chi2: 0.1614733714390349
[2026-02-09 20:40:03] 2026-02-09 19:39:31,225 | INFO     | current chi2=0.1614733714390349 (change=90.3828572206762 %)
[2026-02-09 20:40:03] 2026-02-09 19:39:31,225 | INFO     | sum of square deviations: 369281342.5
[2026-02-09 20:40:03] 2026-02-09 19:39:31,226 | INFO     | sum of deviations: -17781059976.5
[2026-02-09 20:40:03] 2026-02-09 19:39:31,226 | INFO     | mean x: 1770662724.5
[2026-02-09 20:40:03] 2026-02-09 19:39:31,226 | INFO     | mean y: 2450446.7264150945
[2026-02-09 20:40:03] 2026-02-09 19:39:31,226 | INFO     | intersect: 85260643805.05292
[2026-02-09 20:40:03] 2026-02-09 19:39:31,226 | INFO     | chi2: 0.15132708477850326
[2026-02-09 20:40:03] 2026-02-09 19:39:31,226 | INFO     | current chi2=0.15132708477850326 (change=6.28356649155766 %)
[2026-02-09 20:40:03] 2026-02-09 19:39:31,226 | INFO     | left removable region: 20
[2026-02-09 20:40:03] 2026-02-09 19:39:31,226 | INFO     | sum of square deviations: 226022842.5
[2026-02-09 20:40:03] 2026-02-09 19:39:31,226 | INFO     | sum of deviations: -6916240024.000001
[2026-02-09 20:40:03] 2026-02-09 19:39:31,226 | INFO     | mean x: 1770662846.5
[2026-02-09 20:40:03] 2026-02-09 19:39:31,226 | INFO     | mean y: 2419000.711111111
[2026-02-09 20:40:03] 2026-02-09 19:39:31,226 | INFO     | intersect: 54184240238.41663
[2026-02-09 20:40:03] 2026-02-09 19:39:31,226 | INFO     | chi2: 0.0758561783338218
[2026-02-09 20:40:03] 2026-02-09 19:39:31,226 | INFO     | current memory leak: -30.60 B/s (using 90 data points, chi2=0.08)
[2026-02-09 20:40:03] 2026-02-09 19:39:31,226 | INFO     | could have reported an average CPU frequency of 3640 MHz (7 samples)
[2026-02-09 20:40:03] 2026-02-09 19:39:31,226 | INFO     | ..............................
[2026-02-09 20:40:03] 2026-02-09 19:39:31,226 | INFO     | . Timing measurements:
[2026-02-09 20:40:03] 2026-02-09 19:39:31,226 | INFO     | . get job = 0 s
[2026-02-09 20:40:03] 2026-02-09 19:39:31,226 | INFO     | . initial setup = 3 s
[2026-02-09 20:40:03] 2026-02-09 19:39:31,226 | INFO     | . payload setup = 3 s
[2026-02-09 20:40:03] 2026-02-09 19:39:31,226 | INFO     | . stage-in = 0 s
[2026-02-09 20:40:03] 2026-02-09 19:39:31,226 | INFO     | . payload execution = 7056 s
[2026-02-09 20:40:03] 2026-02-09 19:39:31,227 | INFO     | . stage-out = 0 s
[2026-02-09 20:40:03] 2026-02-09 19:39:31,227 | INFO     | . log creation = 0 s
[2026-02-09 20:40:03] 2026-02-09 19:39:31,227 | INFO     | ..............................
[2026-02-09 20:40:03] 2026-02-09 19:39:31,252 | INFO     | 
[2026-02-09 20:40:03] 2026-02-09 19:39:31,252 | INFO     | job summary report
[2026-02-09 20:40:03] 2026-02-09 19:39:31,252 | INFO     | --------------------------------------------------
[2026-02-09 20:40:03] 2026-02-09 19:39:31,252 | INFO     | PanDA job id: 7008495976
[2026-02-09 20:40:03] 2026-02-09 19:39:31,253 | INFO     | task id: 48431096
[2026-02-09 20:40:03] 2026-02-09 19:39:31,253 | INFO     | errors: (none)
[2026-02-09 20:40:03] 2026-02-09 19:39:31,253 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-09 20:40:03] 2026-02-09 19:39:31,253 | INFO     | pilot state: finished 
[2026-02-09 20:40:03] 2026-02-09 19:39:31,253 | INFO     | transexitcode: 0
[2026-02-09 20:40:03] 2026-02-09 19:39:31,253 | INFO     | exeerrorcode: 0
[2026-02-09 20:40:03] 2026-02-09 19:39:31,253 | INFO     | exeerrordiag: 
[2026-02-09 20:40:03] 2026-02-09 19:39:31,253 | INFO     | exitcode: 0
[2026-02-09 20:40:03] 2026-02-09 19:39:31,253 | INFO     | exitmsg: OK
[2026-02-09 20:40:03] 2026-02-09 19:39:31,253 | INFO     | cpuconsumptiontime: 20427 s
[2026-02-09 20:40:03] 2026-02-09 19:39:31,253 | INFO     | nevents: 400
[2026-02-09 20:40:03] 2026-02-09 19:39:31,253 | INFO     | neventsw: 0
[2026-02-09 20:40:03] 2026-02-09 19:39:31,253 | INFO     | pid: 560209
[2026-02-09 20:40:03] 2026-02-09 19:39:31,253 | INFO     | pgrp: 560209
[2026-02-09 20:40:03] 2026-02-09 19:39:31,253 | INFO     | corecount: 3
[2026-02-09 20:40:03] 2026-02-09 19:39:31,253 | INFO     | event service: False
[2026-02-09 20:40:03] 2026-02-09 19:39:31,253 | INFO     | sizes: {0: 2283089, 11: 2283089, 7062: 2310529, 7063: 2319533, 7065: 2319783}
[2026-02-09 20:40:03] 2026-02-09 19:39:31,253 | INFO     | --------------------------------------------------
[2026-02-09 20:40:03] 2026-02-09 19:39:31,253 | INFO     | 
[2026-02-09 20:40:03] 2026-02-09 19:39:31,253 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-02-09 20:40:03] 2026-02-09 19:39:31,267 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-09 20:40:03] 2026-02-09 19:39:31,267 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-09 20:40:03] 2026-02-09 19:39:31,267 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-09 20:40:03] 2026-02-09 19:39:31,267 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-09 20:40:03] 2026-02-09 19:39:31,267 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-09 20:40:03] 2026-02-09 19:39:31,267 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-09 20:40:03] 2026-02-09 19:39:31,267 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-09 20:40:03] 2026-02-09 19:39:31,267 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-09 20:40:03] 2026-02-09 19:39:31,267 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-09 20:40:03] 2026-02-09 19:39:31,268 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-09 20:40:03] 2026-02-09 19:39:31,268 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-09 20:40:03] 2026-02-09 19:39:31,268 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-09 20:40:03] 2026-02-09 19:39:31,268 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-09 20:40:03] 2026-02-09 19:39:31,268 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-09 20:40:03] 2026-02-09 19:39:31,268 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-09 20:40:03] 2026-02-09 19:39:31,268 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-09 20:40:03] 2026-02-09 19:39:31,268 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-09 20:40:03] 2026-02-09 19:39:31,268 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-09 20:40:03] 2026-02-09 19:39:31,268 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-09 20:40:03] 2026-02-09 19:39:31,268 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-09 20:40:03] 2026-02-09 19:39:31,268 | INFO     | job 7008495976 has completed (purged errors)
[2026-02-09 20:40:03] 2026-02-09 19:39:31,268 | INFO     | overall cleanup function is called
[2026-02-09 20:40:03] 2026-02-09 19:39:31,619 | INFO     | PID=555783 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-09 20:40:03] 2026-02-09 19:39:32,017 | WARNING  | process 560209 can no longer be monitored (due to stat problems) - aborting
[2026-02-09 20:40:03] 2026-02-09 19:39:32,049 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-09 20:40:03] 2026-02-09 19:39:32,089 | INFO     | number of running child processes to parent process 560209: 1
[2026-02-09 20:40:03] 2026-02-09 19:39:32,089 | INFO     | maximum number of monitored processes: 6
[2026-02-09 20:40:03] 2026-02-09 19:39:32,089 | INFO     | aborting job monitoring since job object (job id=7008495976) has expired
[2026-02-09 20:40:03] 2026-02-09 19:39:32,274 | INFO     | --- collectZombieJob: --- 10, [560209]
[2026-02-09 20:40:03] 2026-02-09 19:39:32,274 | INFO     | zombie collector waiting for pid 560209
[2026-02-09 20:40:03] 2026-02-09 19:39:32,274 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-09 20:40:03] 2026-02-09 19:39:32,274 | INFO     | collected zombie processes
[2026-02-09 20:40:03] 2026-02-09 19:39:32,274 | INFO     | will attempt to kill all subprocesses of pid=560209
[2026-02-09 20:40:03] 2026-02-09 19:39:32,320 | INFO     | process IDs to be killed: [560209] (in reverse order)
[2026-02-09 20:40:03] 2026-02-09 19:39:32,347 | WARNING  | found no corresponding commands to process id(s)
[2026-02-09 20:40:03] 2026-02-09 19:39:32,347 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-09 20:40:03] 2026-02-09 19:39:32,349 | INFO     | did not find any defunct processes belonging to 560209
[2026-02-09 20:40:03] 2026-02-09 19:39:32,350 | INFO     | did not find any defunct processes belonging to 560209
[2026-02-09 20:40:03] 2026-02-09 19:39:32,350 | INFO     | ready for new job
[2026-02-09 20:40:03] 2026-02-09 19:39:32,350 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-09 20:40:03] 2026-02-09 19:39:32,351 | INFO     | **************************************
[2026-02-09 20:40:03] 2026-02-09 19:39:32,351 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-09 20:40:03] 2026-02-09 19:39:32,351 | INFO     | **************************************
[2026-02-09 20:40:03] 2026-02-09 19:39:32,351 | INFO     | 
[2026-02-09 20:40:03] 2026-02-09 19:39:32,351 | INFO     | architecture information:
[2026-02-09 20:40:03] 2026-02-09 19:39:32,351 | INFO     | executing command: cat /etc/os-release
[2026-02-09 20:40:03] 2026-02-09 19:39:32,361 | INFO     | cat /etc/os-release:
[2026-02-09 20:40:03] NAME="CentOS Linux"
[2026-02-09 20:40:03] VERSION="7 (Core)"
[2026-02-09 20:40:03] ID="centos"
[2026-02-09 20:40:03] ID_LIKE="rhel fedora"
[2026-02-09 20:40:03] VERSION_ID="7"
[2026-02-09 20:40:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-09 20:40:03] ANSI_COLOR="0;31"
[2026-02-09 20:40:03] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-09 20:40:03] HOME_URL="https://www.centos.org/"
[2026-02-09 20:40:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-09 20:40:03] 
[2026-02-09 20:40:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-09 20:40:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-09 20:40:03] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-09 20:40:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-09 20:40:03] 
[2026-02-09 20:40:03] 2026-02-09 19:39:32,361 | INFO     | **************************************
[2026-02-09 20:40:03] 2026-02-09 19:39:32,864 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-09 20:40:03] 2026-02-09 19:39:32,877 | INFO     | sufficient remaining disk space (364090753024 B)
[2026-02-09 20:40:03] 2026-02-09 19:39:32,878 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-09 20:40:03] 2026-02-09 19:39:32,878 | INFO     | current server update state: UPDATING_FINAL
[2026-02-09 20:40:03] 2026-02-09 19:39:32,878 | INFO     | update_server=False
[2026-02-09 20:40:03] 2026-02-09 19:39:32,878 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-09 20:40:03] 2026-02-09 19:39:32,878 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-09 20:40:03] 2026-02-09 19:39:32,878 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-09 20:40:03] 2026-02-09 19:39:32,878 | INFO     | will abort loop
[2026-02-09 20:40:03] 2026-02-09 19:39:32,878 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-09 20:40:03] 2026-02-09 19:39:32,878 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-09 20:40:03] 2026-02-09 19:39:33,178 | INFO     | all data control threads have been joined
[2026-02-09 20:40:03] 2026-02-09 19:39:33,287 | INFO     | all job control threads have been joined
[2026-02-09 20:40:03] 2026-02-09 19:39:33,473 | INFO     | all payload control threads have been joined
[2026-02-09 20:40:03] 2026-02-09 19:39:33,884 | INFO     | [job] job monitor thread has finished
[2026-02-09 20:40:03] 2026-02-09 19:39:33,884 | INFO     | [job] retrieve thread has finished
[2026-02-09 20:40:03] 2026-02-09 19:39:33,884 | INFO     | [job] queue monitor thread has finished
[2026-02-09 20:40:03] 2026-02-09 19:39:33,929 | INFO     | [payload] execute_payloads thread has finished
[2026-02-09 20:40:03] 2026-02-09 19:39:34,181 | INFO     | [data] control thread has finished
[2026-02-09 20:40:03] 2026-02-09 19:39:34,255 | INFO     | [payload] validate_post thread has finished
[2026-02-09 20:40:03] 2026-02-09 19:39:34,293 | INFO     | [job] control thread has finished
[2026-02-09 20:40:03] 2026-02-09 19:39:34,479 | INFO     | [payload] control thread has finished
[2026-02-09 20:40:03] 2026-02-09 19:39:34,884 | INFO     | [data] copytool_out thread has finished
[2026-02-09 20:40:03] 2026-02-09 19:39:35,020 | INFO     | [job] validate thread has finished
[2026-02-09 20:40:03] 2026-02-09 19:39:35,021 | INFO     | [job] create_data_payload thread has finished
[2026-02-09 20:40:03] 2026-02-09 19:39:35,038 | INFO     | [payload] validate_pre thread has finished
[2026-02-09 20:40:03] 2026-02-09 19:39:35,083 | INFO     | [payload] failed_post thread has finished
[2026-02-09 20:40:03] 2026-02-09 19:39:35,199 | INFO     | [data] copytool_in thread has finished
[2026-02-09 20:40:03] 2026-02-09 19:39:36,885 | INFO     | [data] queue_monitor thread has finished
[2026-02-09 20:40:03] 2026-02-09 19:39:42,554 | INFO     | [monitor] cgroup control has ended
[2026-02-09 20:40:03] 2026-02-09 19:39:43,237 | INFO     | job.realtimelogging is not enabled
[2026-02-09 20:40:03] 2026-02-09 19:39:44,242 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-09 20:40:03] 2026-02-09 19:39:46,197 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140540005812032)>', '<ExcThread(monitor, started 140539517204224)>']
[2026-02-09 20:40:03] 2026-02-09 19:39:51,203 | INFO     | all workflow threads have been joined
[2026-02-09 20:40:03] 2026-02-09 19:39:51,203 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-09 20:40:03] 2026-02-09 19:39:51,203 | INFO     | traces error code: 0
[2026-02-09 20:40:03] 2026-02-09 19:39:51,203 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-09 20:40:03] 2026-02-09 19:40:03,753 | INFO     | PID=555783 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-09 20:40:03] 2026-02-09 19:40:03,754 | INFO     | found 0 job(s) in 20 queues
[2026-02-09 20:40:03] 2026-02-09 19:40:03,754 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-09 20:40:03] 2026-02-09 19:40:03,754 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-09 20:40:03] 2026-02-09 19:40:03,754 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-09 20:40:03] 2026-02-09 19:40:03,754 | INFO     | [monitor] control thread has ended
[2026-02-09 20:40:03] 2026-02-09 19:40:03,800 [wrapper] ==== pilot stdout END ====
[2026-02-09 20:40:03] 2026-02-09 19:40:03,803 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-09 20:40:03] 2026-02-09 19:40:03,805 [wrapper] pilotpid: 555783
[2026-02-09 20:40:03] 2026-02-09 19:40:03,808 [wrapper] Pilot exit status: 0
[2026-02-09 20:40:03] 2026-02-09 19:40:03,816 [wrapper] pandaids: 7008495976
[2026-02-09 20:40:03] 2026-02-09 19:40:03,834 [wrapper] cleanup supervisor_pilot  565679 555784
[2026-02-09 20:40:03] 2026-02-09 19:40:03,836 [wrapper] Test setup, not cleaning
[2026-02-09 20:40:03] 2026-02-09 19:40:03,839 [wrapper] apfmon messages muted
[2026-02-09 20:40:03] 2026-02-09 19:40:03,841 [wrapper] ==== wrapper stdout END ====
[2026-02-09 20:40:03] 2026-02-09 19:40:03,844 [wrapper] ==== wrapper stderr END ====
[2026-02-09 20:40:03]  *** Error codes and diagnostics ***
[2026-02-09 20:40:03]     "exeErrorCode": 0,
[2026-02-09 20:40:03]     "exeErrorDiag": "",
[2026-02-09 20:40:03]     "pilotErrorCode": 0,
[2026-02-09 20:40:03]     "pilotErrorDiag": "",
[2026-02-09 20:40:03]  *** Listing of results directory ***
[2026-02-09 20:40:03] total 944184
[2026-02-09 20:40:03] -rw-r--r-- 1 boinc boinc    584627 Feb  9 02:56 pilot3.tar.gz
[2026-02-09 20:40:03] -rwx------ 1 boinc boinc     36322 Feb  9 02:57 runpilot2-wrapper.sh
[2026-02-09 20:40:03] -rw-r--r-- 1 boinc boinc      5111 Feb  9 02:59 queuedata.json
[2026-02-09 20:40:03] -rw-r--r-- 1 boinc boinc       100 Feb  9 18:41 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-09 20:40:03] -rwxr-xr-x 1 boinc boinc      7986 Feb  9 18:41 run_atlas
[2026-02-09 20:40:03] -rw-r--r-- 1 boinc boinc       105 Feb  9 18:41 job.xml
[2026-02-09 20:40:03] -rw-r--r-- 2 boinc boinc 677145182 Feb  9 18:41 EVNT.48431094._000605.pool.root.1
[2026-02-09 20:40:03] -rw-r--r-- 2 boinc boinc    597964 Feb  9 18:41 input.tar.gz
[2026-02-09 20:40:03] -rw-r--r-- 2 boinc boinc     15845 Feb  9 18:41 start_atlas.sh
[2026-02-09 20:40:03] drwxrwx--x 2 boinc boinc      4096 Feb  9 18:41 shared
[2026-02-09 20:40:03] -rw-r--r-- 1 boinc boinc         0 Feb  9 18:41 boinc_setup_complete
[2026-02-09 20:40:03] -rw-r--r-- 1 boinc boinc      6449 Feb  9 18:41 init_data.xml
[2026-02-09 20:40:03] -rw-r--r-- 1 boinc boinc         0 Feb  9 18:41 boinc_lockfile
[2026-02-09 20:40:03] -rw-r--r-- 1 boinc boinc      2556 Feb  9 18:41 pandaJob.out
[2026-02-09 20:40:03] -rw------- 1 boinc boinc   1009496 Feb  9 18:41 agis_schedconf.cvmfs.json
[2026-02-09 20:40:03] -rw------- 1 boinc boinc   1513144 Feb  9 18:41 agis_ddmendpoints.agis.ALL.json
[2026-02-09 20:40:03] -rw------- 1 boinc boinc       426 Feb  9 18:41 workernode_map.json
[2026-02-09 20:40:03] drwx------ 5 boinc boinc      4096 Feb  9 18:41 pilot3
[2026-02-09 20:40:03] -rw------- 1 boinc boinc 283114325 Feb  9 20:39 HITS.48431096._013453.pool.root.1
[2026-02-09 20:40:03] -rw------- 1 boinc boinc        95 Feb  9 20:39 pilot_heartbeat.json
[2026-02-09 20:40:03] -rw-r--r-- 1 boinc boinc       530 Feb  9 20:39 boinc_task_state.xml
[2026-02-09 20:40:03] -rw------- 1 boinc boinc      1016 Feb  9 20:39 memory_monitor_summary.json
[2026-02-09 20:40:03] -rw------- 1 boinc boinc    308955 Feb  9 20:39 log.48431096._013453.job.log.tgz.1
[2026-02-09 20:40:03] -rw------- 1 boinc boinc      6310 Feb  9 20:39 heartbeat.json
[2026-02-09 20:40:03] -rw-r--r-- 1 boinc boinc      8192 Feb  9 20:40 boinc_mmap_file
[2026-02-09 20:40:03] -rw-r--r-- 1 boinc boinc        27 Feb  9 20:40 wrapper_checkpoint.txt
[2026-02-09 20:40:03] -rw------- 1 boinc boinc       746 Feb  9 20:40 pilotlog.txt
[2026-02-09 20:40:03] -rw------- 1 boinc boinc   1015032 Feb  9 20:40 log.48431096._013453.job.log.1
[2026-02-09 20:40:03] -rw------- 1 boinc boinc       357 Feb  9 20:40 output.list
[2026-02-09 20:40:03] -rw-r--r-- 1 boinc boinc       620 Feb  9 20:40 runtime_log
[2026-02-09 20:40:03] -rw------- 1 boinc boinc   1341440 Feb  9 20:40 result.tar.gz
[2026-02-09 20:40:03] -rw-r--r-- 1 boinc boinc      8916 Feb  9 20:40 runtime_log.err
[2026-02-09 20:40:03] -rw------- 1 boinc boinc       661 Feb  9 20:40 r88NDmEiV98n9Rq4apOajLDm4fhM0noT9bVooX4SDmIIeKDm6NC90n.diag
[2026-02-09 20:40:03] -rw-r--r-- 1 boinc boinc     21291 Feb  9 20:40 stderr.txt
[2026-02-09 20:40:03] HITS file was successfully produced:
[2026-02-09 20:40:03] -rw------- 1 boinc boinc 283114325 Feb  9 20:39 shared/HITS.pool.root.1
[2026-02-09 20:40:03]  *** Contents of shared directory: ***
[2026-02-09 20:40:03] total 939676
[2026-02-09 20:40:03] -rw-r--r-- 2 boinc boinc 677145182 Feb  9 18:41 ATLAS.root_0
[2026-02-09 20:40:03] -rw-r--r-- 2 boinc boinc    597964 Feb  9 18:41 input.tar.gz
[2026-02-09 20:40:03] -rw-r--r-- 2 boinc boinc     15845 Feb  9 18:41 start_atlas.sh
[2026-02-09 20:40:03] -rw------- 1 boinc boinc 283114325 Feb  9 20:39 HITS.pool.root.1
[2026-02-09 20:40:03] -rw------- 1 boinc boinc   1341440 Feb  9 20:40 result.tar.gz
20:40:04 (551732): run_atlas exited; CPU time 20466.291597
20:40:04 (551732): called boinc_finish(0)

</stderr_txt>
]]>

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