Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-02-09 05:11:58 (486957): vboxwrapper version 26210
2026-02-09 05:11:58 (486957): BOINC client version: 8.2.8
2026-02-09 05:11:58 (486957): Detected: VirtualBox VboxManage Interface (Version: 7.2.6)
2026-02-09 05:11:59 (486957): Successfully copied 'init_data.xml' to the shared directory.
2026-02-09 05:11:59 (486957): Create VM. (boinc_f36fc45fdbc2c85e, slot#2)
2026-02-09 05:11:59 (486957): Setting Memory Size for VM. (4600MB)
2026-02-09 05:11:59 (486957): Setting CPU Count for VM. (6)
2026-02-09 05:11:59 (486957): Setting Chipset Options for VM.
2026-02-09 05:11:59 (486957): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-02-09 05:11:59 (486957): Setting Boot Options for VM.
2026-02-09 05:12:00 (486957): Setting Network Configuration for NAT. (Driver: virtio)
2026-02-09 05:12:00 (486957): Enabling VM Network Access.
2026-02-09 05:12:00 (486957): Disabling USB Support for VM.
2026-02-09 05:12:00 (486957): Disabling COM Port Support for VM.
2026-02-09 05:12:00 (486957): Disabling LPT Port Support for VM.
2026-02-09 05:12:00 (486957): Disabling Audio Support for VM.
2026-02-09 05:12:00 (486957): Disabling Clipboard Support for VM.
2026-02-09 05:12:00 (486957): Disabling Drag and Drop Support for VM.
2026-02-09 05:12:00 (486957): Adding storage controller(s) to VM.
2026-02-09 05:12:00 (486957): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-02-09 05:12:01 (486957): Adding VirtualBox Guest Additions to VM.
2026-02-09 05:12:01 (486957): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-02-09 05:12:02 (486957): forwarding host port 51077 to guest port 80
2026-02-09 05:12:02 (486957): Enabling remote desktop for VM.
2026-02-09 05:12:02 (486957): Required extension pack not installed, remote desktop not enabled.
2026-02-09 05:12:02 (486957): Enabling shared directory for VM.
2026-02-09 05:12:02 (486957): Starting VM using VBoxManage interface. (boinc_f36fc45fdbc2c85e, slot#2)
2026-02-09 05:12:03 (486957): Successfully started VM. (PID = '487572')
2026-02-09 05:12:03 (486957): Reporting VM Process ID to BOINC.
2026-02-09 05:12:03 (486957): Guest Log: BIOS: VirtualBox 7.2.6
2026-02-09 05:12:03 (486957): Guest Log: CPUID EDX: 0x178bfbff
2026-02-09 05:12:03 (486957): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-02-09 05:12:03 (486957): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-02-09 05:12:03 (486957): VM state change detected. (old = 'poweredoff', new = 'running')
2026-02-09 05:12:03 (486957): Detected: Web Application Enabled (http://localhost:51077)
2026-02-09 05:12:03 (486957): Preference change detected
2026-02-09 05:12:03 (486957): Setting CPU throttle for VM. (85%)
2026-02-09 05:12:03 (486957): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-02-09 05:12:05 (486957): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-02-09 05:12:05 (486957): Guest Log: BIOS: Booting from Hard Disk...
2026-02-09 05:12:08 (486957): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-02-09 05:12:08 (486957): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-02-09 05:12:08 (486957): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-02-09 05:12:08 (486957): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-02-09 05:12:08 (486957): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-02-09 05:12:08 (486957): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-02-09 05:12:08 (486957): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-02-09 05:12:08 (486957): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-02-09 05:12:08 (486957): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-02-09 05:12:08 (486957): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-02-09 05:12:08 (486957): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-02-09 05:12:08 (486957): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-02-09 05:12:08 (486957): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-02-09 05:12:08 (486957): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-02-09 05:12:08 (486957): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-02-09 05:12:08 (486957): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-02-09 05:12:08 (486957): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-02-09 05:12:08 (486957): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-02-09 05:12:08 (486957): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-02-09 05:12:08 (486957): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-02-09 05:12:08 (486957): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-02-09 05:12:08 (486957): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-02-09 05:12:08 (486957): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-02-09 05:12:08 (486957): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-02-09 05:12:08 (486957): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-02-09 05:12:08 (486957): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-02-09 05:12:08 (486957): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-02-09 05:12:08 (486957): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-02-09 05:12:08 (486957): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-02-09 05:12:08 (486957): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-02-09 05:12:08 (486957): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-02-09 05:12:08 (486957): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-02-09 05:12:14 (486957): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-02-09 05:12:14 (486957): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-02-09 05:12:19 (486957): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-02-09 05:12:19 (486957): Guest Log: 00:00:00.000143 main     Log opened 2026-02-09T04:12:16.641375000Z
2026-02-09 05:12:19 (486957): Guest Log: 00:00:00.000219 main     OS Product: Linux
2026-02-09 05:12:19 (486957): Guest Log: 00:00:00.000235 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-02-09 05:12:19 (486957): Guest Log: 00:00:00.000248 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-02-09 05:12:19 (486957): Guest Log: 00:00:00.000265 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-02-09 05:12:19 (486957): Guest Log: 00:00:00.000265 main     Process ID: 1335
2026-02-09 05:12:19 (486957): Guest Log: 00:00:00.000266 main     Package type: LINUX_64BITS_GENERIC
2026-02-09 05:12:19 (486957): Guest Log: 00:00:00.001876 main     5.2.32 r132073 started. Verbose level = 0
2026-02-09 05:12:19 (486957): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-02-09 05:12:19 (486957): Guest Log: [INFO] Mounting shared directory
2026-02-09 05:12:19 (486957): Guest Log: [INFO] Checking for init_data.xml
2026-02-09 05:13:23 (486957): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-02-09 05:13:23 (486957): Guest Log: [INFO] Detected branch: prod
2026-02-09 05:13:23 (486957): Guest Log: This is the prod version of the ATLAS job wrapper
2026-02-09 05:13:23 (486957): Guest Log: Copying input files
2026-02-09 05:13:25 (486957): Guest Log: Copied input files into RunAtlas.
2026-02-09 05:13:25 (486957): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-02-09 05:13:25 (486957): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-02-09 05:13:25 (486957): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-02-09 05:13:25 (486957): Guest Log: Further information can be found at the LHC@home message board.
2026-02-09 05:13:35 (486957): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-02-09 05:13:36 (486957): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-02-09 05:13:36 (486957): Guest Log: 2.6.3.0 1636 0 30064 156043 3 1 3117739 4096000 0 65024 1 0 n/a 1 0 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-02-09 05:13:36 (486957): Guest Log: copied the webapp to /var/www
2026-02-09 05:13:36 (486957): Guest Log: ATHENA_PROC_NUMBER=6
2026-02-09 05:13:36 (486957): Guest Log: ATHENA_CORE_NUMBER=6
2026-02-09 05:13:37 (486957): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-02-09 05:13:37 (486957): Guest Log:  *** Starting ATLAS job. (PandaID=7005776775 taskID=48318010) ***
2026-02-09 06:51:04 (486957): Status Report: Elapsed Time: '6000.000000'
2026-02-09 06:51:04 (486957): Status Report: CPU Time: '28985.610000'
2026-02-09 06:58:51 (486957): Guest Log:  *** Job finished ***
2026-02-09 06:58:51 (486957): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-02-09 06:58:51 (486957): Guest Log: 2026-02-09 05:58:25,587 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
2026-02-09 06:58:51 (486957): Guest Log: 2026-02-09 05:58:29,633 | INFO     | [data] queue_monitor thread has finished
2026-02-09 06:58:51 (486957): Guest Log: 2026-02-09 05:58:43,549 | INFO     | [monitor] cgroup control has ended
2026-02-09 06:58:51 (486957): Guest Log: 2026-02-09 05:58:45,561 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139703682582336)>', '<ExcThread(monitor, started 139702778709760)>']
2026-02-09 06:58:51 (486957): Guest Log: 2026-02-09 05:58:46,132 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-02-09 06:58:51 (486957): Guest Log: 2026-02-09 05:58:46,132 | INFO     | [monitor] control thread has ended
2026-02-09 06:58:51 (486957): Guest Log: 2026-02-09 05:58:50,582 | INFO     | all workflow threads have been joined
2026-02-09 06:58:51 (486957): Guest Log: 2026-02-09 05:58:50,583 | INFO     | end of generic workflow (traces error code: 0)
2026-02-09 06:58:51 (486957): Guest Log: 2026-02-09 05:58:50,583 | INFO     | traces error code: 0
2026-02-09 06:58:51 (486957): Guest Log: 2026-02-09 05:58:50,584 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-02-09 06:58:51 (486957): Guest Log: 2026-02-09 05:58:50,673 [wrapper] ==== pilot stdout END ====
2026-02-09 06:58:51 (486957): Guest Log: 2026-02-09 05:58:50,681 [wrapper] ==== wrapper stdout RESUME ====
2026-02-09 06:58:51 (486957): Guest Log: 2026-02-09 05:58:50,686 [wrapper] pilotpid: 6052
2026-02-09 06:58:51 (486957): Guest Log: 2026-02-09 05:58:50,693 [wrapper] Pilot exit status: 0
2026-02-09 06:58:51 (486957): Guest Log: 2026-02-09 05:58:50,878 [wrapper] pandaids: 7005776775
2026-02-09 06:58:51 (486957): Guest Log: 2026-02-09 05:58:50,918 [wrapper] cleanup supervisor_pilot 25788 6053
2026-02-09 06:58:51 (486957): Guest Log: 2026-02-09 05:58:50,924 [wrapper] Test setup, not cleaning
2026-02-09 06:58:51 (486957): Guest Log: 2026-02-09 05:58:50,929 [wrapper] apfmon messages muted
2026-02-09 06:58:51 (486957): Guest Log: 2026-02-09 05:58:50,933 [wrapper] ==== wrapper stdout END ====
2026-02-09 06:58:51 (486957): Guest Log: 2026-02-09 05:58:50,938 [wrapper] ==== wrapper stderr END ====
2026-02-09 06:58:51 (486957): Guest Log:  *** Error codes and diagnostics ***
2026-02-09 06:58:51 (486957): Guest Log:     "exeErrorCode": 0,
2026-02-09 06:58:51 (486957): Guest Log:     "exeErrorDiag": "",
2026-02-09 06:58:51 (486957): Guest Log:     "pilotErrorCode": 0,
2026-02-09 06:58:51 (486957): Guest Log:     "pilotErrorDiag": "",
2026-02-09 06:58:51 (486957): Guest Log:  *** Listing of results directory ***
2026-02-09 06:58:51 (486957): Guest Log: total 189528
2026-02-09 06:58:51 (486957): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Feb  8 21:52 pilot3.tar.gz
2026-02-09 06:58:51 (486957): Guest Log: -rwx------. 1 atlas atlas     36322 Feb  8 21:56 runpilot2-wrapper.sh
2026-02-09 06:58:51 (486957): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Feb  8 21:59 queuedata.json
2026-02-09 06:58:51 (486957): Guest Log: -rw-r--r--. 1 atlas atlas    597954 Feb  9 04:13 input.tar.gz
2026-02-09 06:58:51 (486957): Guest Log: -rw-r--r--. 1 atlas atlas     15845 Feb  9 04:13 start_atlas.sh
2026-02-09 06:58:51 (486957): Guest Log: -rw-r--r--. 1 atlas atlas      6309 Feb  9 04:13 init_data.xml
2026-02-09 06:58:51 (486957): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb  9 04:13 EVNT.48318008._000264.pool.root.1 -> /data/./ATLAS.root_0
2026-02-09 06:58:51 (486957): Guest Log: -rw-r--r--. 1 atlas atlas      2527 Feb  9 04:13 pandaJob.out
2026-02-09 06:58:51 (486957): Guest Log: -rw-------. 1 atlas atlas   1009504 Feb  9 04:14 agis_schedconf.cvmfs.json
2026-02-09 06:58:51 (486957): Guest Log: -rw-------. 1 atlas atlas   1513088 Feb  9 04:14 agis_ddmendpoints.agis.ALL.json
2026-02-09 06:58:51 (486957): Guest Log: -rw-------. 1 atlas atlas       423 Feb  9 04:14 workernode_map.json
2026-02-09 06:58:51 (486957): Guest Log: drwx------. 5 atlas atlas      4096 Feb  9 04:14 pilot3
2026-02-09 06:58:51 (486957): Guest Log: -rw-------. 1 atlas atlas        95 Feb  9 05:57 pilot_heartbeat.json
2026-02-09 06:58:51 (486957): Guest Log: -rw-------. 1 atlas atlas 187802110 Feb  9 05:57 HITS.48318010._014622.pool.root.1
2026-02-09 06:58:51 (486957): Guest Log: -rw-------. 1 atlas atlas      1026 Feb  9 05:58 memory_monitor_summary.json
2026-02-09 06:58:51 (486957): Guest Log: -rw-------. 1 atlas atlas    316534 Feb  9 05:58 log.48318010._014622.job.log.tgz.1
2026-02-09 06:58:51 (486957): Guest Log: -rw-------. 1 atlas atlas      6357 Feb  9 05:58 heartbeat.json
2026-02-09 06:58:51 (486957): Guest Log: -rw-------. 1 atlas atlas      4608 Feb  9 05:58 pilotlog.txt
2026-02-09 06:58:51 (486957): Guest Log: -rw-------. 1 atlas atlas    888352 Feb  9 05:58 log.48318010._014622.job.log.1
2026-02-09 06:58:51 (486957): Guest Log: -rw-------. 1 atlas atlas       357 Feb  9 05:58 output.list
2026-02-09 06:58:51 (486957): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb  9 05:58 runtime_log
2026-02-09 06:58:51 (486957): Guest Log: -rw-------. 1 atlas atlas   1218560 Feb  9 05:58 result.tar.gz
2026-02-09 06:58:51 (486957): Guest Log: -rw-r--r--. 1 atlas atlas      8742 Feb  9 05:58 runtime_log.err
2026-02-09 06:58:51 (486957): Guest Log: -rw-------. 1 atlas atlas       651 Feb  9 05:58 Q1tNDmNwR98nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmGbeKDm9Hrvem.diag
2026-02-09 06:58:51 (486957): Guest Log: Looking for outputfile HITS.48318010._014622.pool.root.1
2026-02-09 06:58:51 (486957): Guest Log: HITS file was successfully produced
2026-02-09 06:58:51 (486957): Guest Log: -rw-------. 1 atlas atlas 187802110 Feb  9 05:57 /home/atlas/RunAtlas/HITS.48318010._014622.pool.root.1
2026-02-09 06:58:51 (486957): Guest Log: Successfully finished the ATLAS job!
2026-02-09 06:58:51 (486957): Guest Log: Copying the results back to the shared directory!
2026-02-09 06:58:51 (486957): Guest Log:  *** Contents of shared directory: ***
2026-02-09 06:58:51 (486957): Guest Log: total 491392
2026-02-09 06:58:51 (486957): Guest Log: -rw-r--r--. 1 root root 501337960 Feb  9 04:11 ATLAS.root_0
2026-02-09 06:58:51 (486957): Guest Log: -rw-r--r--. 1 root root      6309 Feb  9 04:11 init_data.xml
2026-02-09 06:58:51 (486957): Guest Log: -rw-r--r--. 1 root root    597954 Feb  9 04:11 input.tar.gz
2026-02-09 06:58:51 (486957): Guest Log: -rw-r--r--. 1 root root   1218560 Feb  9 05:58 result.tar.gz
2026-02-09 06:58:51 (486957): Guest Log: -rw-r--r--. 1 root root     15845 Feb  9 04:11 start_atlas.sh
2026-02-09 06:58:51 (486957): Guest Log:  *** Success! Shutting down the machine. ***
2026-02-09 06:58:51 (486957): VM Completion File Detected.
2026-02-09 06:58:51 (486957): Powering off VM.
2026-02-09 06:58:51 (486957): Successfully stopped VM.
2026-02-09 06:58:51 (486957): Deregistering VM. (boinc_f36fc45fdbc2c85e, slot#2)
2026-02-09 06:58:51 (486957): Removing network bandwidth throttle group from VM.
2026-02-09 06:58:52 (486957): Removing VM from VirtualBox.
2026-02-09 06:58:57 (486957): called boinc_finish(0)

</stderr_txt>
]]>

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