Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
14:40:28 (523055): wrapper (7.7.26015): starting
14:40:28 (523055): wrapper: running run_atlas (--nthreads 3)
[2026-02-09 14:40:28] Arguments: --nthreads 3
[2026-02-09 14:40:28] Threads: 3
[2026-02-09 14:40:28] Checking for CVMFS
[2026-02-09 14:40:28] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-09 14:40:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-09 14:40:29] Running cvmfs_config stat atlas.cern.ch
[2026-02-09 14:40:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-09 14:40:29] 2.9.2.0 4008882 4721 83524 156054 0 188 36412675 36864000 0 130560 0 2006489 99.983 170615 6293 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-09 14:40:29] CVMFS is ok
[2026-02-09 14:40:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-09 14:40:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-09 14:40:29] Further information can be found at the LHC@home message board.
[2026-02-09 14:40:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-09 14:40:29] Checking for apptainer binary...
[2026-02-09 14:40:29] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-09 14:40:29] Running /usr/bin/apptainer --version
[2026-02-09 14:40:29] apptainer version 1.4.1-1.1
[2026-02-09 14:40:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-09 14:40:29] belleA263b
[2026-02-09 14:40:29] apptainer works
[2026-02-09 14:40:29] Set ATHENA_PROC_NUMBER=3
[2026-02-09 14:40:29] Set ATHENA_CORE_NUMBER=3
[2026-02-09 14:40:29] Starting ATLAS job with PandaID=7008293839
[2026-02-09 14:40:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-09 16:39:09]  *** The last 200 lines of the pilot log: ***
[2026-02-09 16:39:09] 2026-02-09 15:38:36,596 | INFO     | preparing for final server update for job 7008293839 in state='finished'
[2026-02-09 16:39:09] 2026-02-09 15:38:36,596 | INFO     | reading metadata from: /local/data/boinc/slots/0/PanDA_Pilot-7008293839/jobReport.json
[2026-02-09 16:39:09] 2026-02-09 15:38:36,597 | INFO     | added worker_node to metadata from /local/data/boinc/slots/0/workernode_map.json
[2026-02-09 16:39:09] 2026-02-09 15:38:36,597 | INFO     | this job has now completed (state=finished)
[2026-02-09 16:39:09] 2026-02-09 15:38:36,597 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-09 16:39:09] 2026-02-09 15:38:36,597 | INFO     | log transfer has been attempted: DONE
[2026-02-09 16:39:09] 2026-02-09 15:38:36,597 | INFO     | job 7008293839 has finished - writing final server update
[2026-02-09 16:39:09] 2026-02-09 15:38:36,597 | INFO     | total number of processed events: 400 (read)
[2026-02-09 16:39:09] 2026-02-09 15:38:36,598 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-7008293839/memory_monitor_summary.json (trf name=prmon)
[2026-02-09 16:39:09] 2026-02-09 15:38:36,598 | INFO     | extracted standard info from prmon json
[2026-02-09 16:39:09] 2026-02-09 15:38:36,598 | INFO     | extracted standard memory fields from prmon json
[2026-02-09 16:39:09] 2026-02-09 15:38:36,598 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-09 16:39:09] 2026-02-09 15:38:36,598 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-09 16:39:09] 2026-02-09 15:38:36,598 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-09 16:39:09] 2026-02-09 15:38:36,599 | INFO     | fitting pss+swap vs Time
[2026-02-09 16:39:09] 2026-02-09 15:38:36,599 | INFO     | sum of square deviations: 483971865.0
[2026-02-09 16:39:09] 2026-02-09 15:38:36,599 | INFO     | sum of deviations: 13400422599.000004
[2026-02-09 16:39:09] 2026-02-09 15:38:36,600 | INFO     | mean x: 1770647964.5
[2026-02-09 16:39:09] 2026-02-09 15:38:36,600 | INFO     | mean y: 2596956.0862068967
[2026-02-09 16:39:09] 2026-02-09 15:38:36,600 | INFO     | intersect: -49023870725.78856
[2026-02-09 16:39:09] 2026-02-09 15:38:36,600 | INFO     | chi2: 1.5467225849575408
[2026-02-09 16:39:09] 2026-02-09 15:38:36,600 | INFO     | sum of square deviations: 424045160.0
[2026-02-09 16:39:09] 2026-02-09 15:38:36,600 | INFO     | sum of deviations: 12751038376.0
[2026-02-09 16:39:09] 2026-02-09 15:38:36,600 | INFO     | mean x: 1770647812.0
[2026-02-09 16:39:09] 2026-02-09 15:38:36,600 | INFO     | mean y: 2595302.5225225226
[2026-02-09 16:39:09] 2026-02-09 15:38:36,600 | INFO     | intersect: -53240786136.3611
[2026-02-09 16:39:09] 2026-02-09 15:38:36,600 | INFO     | chi2: 1.5498314019571973
[2026-02-09 16:39:09] 2026-02-09 15:38:36,600 | INFO     | current chi2=1.5498314019571973 (change=-0.20099383237116328 %)
[2026-02-09 16:39:09] 2026-02-09 15:38:36,600 | INFO     | right removable region: 110
[2026-02-09 16:39:09] 2026-02-09 15:38:36,600 | INFO     | sum of square deviations: 424045160.0
[2026-02-09 16:39:09] 2026-02-09 15:38:36,600 | INFO     | sum of deviations: -5190406307.999997
[2026-02-09 16:39:09] 2026-02-09 15:38:36,600 | INFO     | mean x: 1770648117.0
[2026-02-09 16:39:09] 2026-02-09 15:38:36,601 | INFO     | mean y: 2643325.153153153
[2026-02-09 16:39:09] 2026-02-09 15:38:36,601 | INFO     | intersect: 21675766904.07837
[2026-02-09 16:39:09] 2026-02-09 15:38:36,601 | INFO     | chi2: 0.02545066231210787
[2026-02-09 16:39:09] 2026-02-09 15:38:36,601 | INFO     | current chi2=0.02545066231210787 (change=98.35454253014568 %)
[2026-02-09 16:39:09] 2026-02-09 15:38:36,601 | INFO     | sum of square deviations: 369281342.5
[2026-02-09 16:39:09] 2026-02-09 15:38:36,601 | INFO     | sum of deviations: -3702701403.0
[2026-02-09 16:39:09] 2026-02-09 15:38:36,601 | INFO     | mean x: 1770648269.5
[2026-02-09 16:39:09] 2026-02-09 15:38:36,601 | INFO     | mean y: 2639167.9433962265
[2026-02-09 16:39:09] 2026-02-09 15:38:36,601 | INFO     | intersect: 17756533224.1999
[2026-02-09 16:39:09] 2026-02-09 15:38:36,601 | INFO     | chi2: 0.0234625571668302
[2026-02-09 16:39:09] 2026-02-09 15:38:36,601 | INFO     | current chi2=0.0234625571668302 (change=7.811604746851125 %)
[2026-02-09 16:39:09] 2026-02-09 15:38:36,601 | INFO     | left removable region: 20
[2026-02-09 16:39:09] 2026-02-09 15:38:36,601 | INFO     | sum of square deviations: 226022842.5
[2026-02-09 16:39:09] 2026-02-09 15:38:36,601 | INFO     | sum of deviations: 398023139.5
[2026-02-09 16:39:09] 2026-02-09 15:38:36,601 | INFO     | mean x: 1770648391.5
[2026-02-09 16:39:09] 2026-02-09 15:38:36,601 | INFO     | mean y: 2624910.788888889
[2026-02-09 16:39:09] 2026-02-09 15:38:36,601 | INFO     | intersect: -3115462730.0010242
[2026-02-09 16:39:09] 2026-02-09 15:38:36,601 | INFO     | chi2: 0.0014935694691617864
[2026-02-09 16:39:09] 2026-02-09 15:38:36,602 | INFO     | current memory leak: 1.76 B/s (using 90 data points, chi2=0.00)
[2026-02-09 16:39:09] 2026-02-09 15:38:36,602 | INFO     | could have reported an average CPU frequency of 3771 MHz (7 samples)
[2026-02-09 16:39:09] 2026-02-09 15:38:36,602 | INFO     | ..............................
[2026-02-09 16:39:09] 2026-02-09 15:38:36,602 | INFO     | . Timing measurements:
[2026-02-09 16:39:09] 2026-02-09 15:38:36,602 | INFO     | . get job = 0 s
[2026-02-09 16:39:09] 2026-02-09 15:38:36,602 | INFO     | . initial setup = 3 s
[2026-02-09 16:39:09] 2026-02-09 15:38:36,602 | INFO     | . payload setup = 3 s
[2026-02-09 16:39:09] 2026-02-09 15:38:36,602 | INFO     | . stage-in = 0 s
[2026-02-09 16:39:09] 2026-02-09 15:38:36,602 | INFO     | . payload execution = 7056 s
[2026-02-09 16:39:09] 2026-02-09 15:38:36,602 | INFO     | . stage-out = 0 s
[2026-02-09 16:39:09] 2026-02-09 15:38:36,602 | INFO     | . log creation = 0 s
[2026-02-09 16:39:09] 2026-02-09 15:38:36,602 | INFO     | ..............................
[2026-02-09 16:39:09] 2026-02-09 15:38:36,628 | INFO     | 
[2026-02-09 16:39:09] 2026-02-09 15:38:36,628 | INFO     | job summary report
[2026-02-09 16:39:09] 2026-02-09 15:38:36,628 | INFO     | --------------------------------------------------
[2026-02-09 16:39:09] 2026-02-09 15:38:36,628 | INFO     | PanDA job id: 7008293839
[2026-02-09 16:39:09] 2026-02-09 15:38:36,628 | INFO     | task id: 48431096
[2026-02-09 16:39:09] 2026-02-09 15:38:36,628 | INFO     | errors: (none)
[2026-02-09 16:39:09] 2026-02-09 15:38:36,628 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-09 16:39:09] 2026-02-09 15:38:36,628 | INFO     | pilot state: finished 
[2026-02-09 16:39:09] 2026-02-09 15:38:36,628 | INFO     | transexitcode: 0
[2026-02-09 16:39:09] 2026-02-09 15:38:36,628 | INFO     | exeerrorcode: 0
[2026-02-09 16:39:09] 2026-02-09 15:38:36,628 | INFO     | exeerrordiag: 
[2026-02-09 16:39:09] 2026-02-09 15:38:36,629 | INFO     | exitcode: 0
[2026-02-09 16:39:09] 2026-02-09 15:38:36,629 | INFO     | exitmsg: OK
[2026-02-09 16:39:09] 2026-02-09 15:38:36,629 | INFO     | cpuconsumptiontime: 20387 s
[2026-02-09 16:39:09] 2026-02-09 15:38:36,629 | INFO     | nevents: 400
[2026-02-09 16:39:09] 2026-02-09 15:38:36,629 | INFO     | neventsw: 0
[2026-02-09 16:39:09] 2026-02-09 15:38:36,629 | INFO     | pid: 531537
[2026-02-09 16:39:09] 2026-02-09 15:38:36,629 | INFO     | pgrp: 531537
[2026-02-09 16:39:09] 2026-02-09 15:38:36,629 | INFO     | corecount: 3
[2026-02-09 16:39:09] 2026-02-09 15:38:36,629 | INFO     | event service: False
[2026-02-09 16:39:09] 2026-02-09 15:38:36,629 | INFO     | sizes: {0: 2283089, 11: 2283089, 7062: 2310529, 7063: 2319533, 7065: 2319783}
[2026-02-09 16:39:09] 2026-02-09 15:38:36,629 | INFO     | --------------------------------------------------
[2026-02-09 16:39:09] 2026-02-09 15:38:36,629 | INFO     | 
[2026-02-09 16:39:09] 2026-02-09 15:38:36,629 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-02-09 16:39:09] 2026-02-09 15:38:36,642 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-09 16:39:09] 2026-02-09 15:38:36,642 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-09 16:39:09] 2026-02-09 15:38:36,642 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-09 16:39:09] 2026-02-09 15:38:36,642 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-09 16:39:09] 2026-02-09 15:38:36,642 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-09 16:39:09] 2026-02-09 15:38:36,642 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-09 16:39:09] 2026-02-09 15:38:36,642 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-09 16:39:09] 2026-02-09 15:38:36,642 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-09 16:39:09] 2026-02-09 15:38:36,642 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-09 16:39:09] 2026-02-09 15:38:36,642 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-09 16:39:09] 2026-02-09 15:38:36,642 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-09 16:39:09] 2026-02-09 15:38:36,642 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-09 16:39:09] 2026-02-09 15:38:36,642 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-09 16:39:09] 2026-02-09 15:38:36,642 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-09 16:39:09] 2026-02-09 15:38:36,642 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-09 16:39:09] 2026-02-09 15:38:36,642 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-09 16:39:09] 2026-02-09 15:38:36,643 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-09 16:39:09] 2026-02-09 15:38:36,643 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-09 16:39:09] 2026-02-09 15:38:36,643 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-09 16:39:09] 2026-02-09 15:38:36,643 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-09 16:39:09] 2026-02-09 15:38:36,643 | INFO     | job 7008293839 has completed (purged errors)
[2026-02-09 16:39:09] 2026-02-09 15:38:36,643 | INFO     | overall cleanup function is called
[2026-02-09 16:39:09] 2026-02-09 15:38:36,864 | INFO     | PID=527110 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-09 16:39:09] 2026-02-09 15:38:37,649 | INFO     | --- collectZombieJob: --- 10, [531537]
[2026-02-09 16:39:09] 2026-02-09 15:38:37,650 | INFO     | zombie collector waiting for pid 531537
[2026-02-09 16:39:09] 2026-02-09 15:38:37,650 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-09 16:39:09] 2026-02-09 15:38:37,650 | INFO     | collected zombie processes
[2026-02-09 16:39:09] 2026-02-09 15:38:37,650 | INFO     | will attempt to kill all subprocesses of pid=531537
[2026-02-09 16:39:09] 2026-02-09 15:38:37,695 | INFO     | process IDs to be killed: [531537] (in reverse order)
[2026-02-09 16:39:09] 2026-02-09 15:38:37,722 | WARNING  | found no corresponding commands to process id(s)
[2026-02-09 16:39:09] 2026-02-09 15:38:37,722 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-09 16:39:09] 2026-02-09 15:38:37,724 | INFO     | did not find any defunct processes belonging to 531537
[2026-02-09 16:39:09] 2026-02-09 15:38:37,725 | INFO     | did not find any defunct processes belonging to 531537
[2026-02-09 16:39:09] 2026-02-09 15:38:37,725 | INFO     | ready for new job
[2026-02-09 16:39:09] 2026-02-09 15:38:37,725 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-09 16:39:09] 2026-02-09 15:38:37,726 | INFO     | **************************************
[2026-02-09 16:39:09] 2026-02-09 15:38:37,726 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-09 16:39:09] 2026-02-09 15:38:37,726 | INFO     | **************************************
[2026-02-09 16:39:09] 2026-02-09 15:38:37,726 | INFO     | 
[2026-02-09 16:39:09] 2026-02-09 15:38:37,726 | INFO     | architecture information:
[2026-02-09 16:39:09] 2026-02-09 15:38:37,726 | INFO     | executing command: cat /etc/os-release
[2026-02-09 16:39:09] 2026-02-09 15:38:37,735 | INFO     | cat /etc/os-release:
[2026-02-09 16:39:09] NAME="CentOS Linux"
[2026-02-09 16:39:09] VERSION="7 (Core)"
[2026-02-09 16:39:09] ID="centos"
[2026-02-09 16:39:09] ID_LIKE="rhel fedora"
[2026-02-09 16:39:09] VERSION_ID="7"
[2026-02-09 16:39:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-09 16:39:09] ANSI_COLOR="0;31"
[2026-02-09 16:39:09] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-09 16:39:09] HOME_URL="https://www.centos.org/"
[2026-02-09 16:39:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-09 16:39:09] 
[2026-02-09 16:39:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-09 16:39:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-09 16:39:09] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-09 16:39:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-09 16:39:09] 
[2026-02-09 16:39:09] 2026-02-09 15:38:37,735 | INFO     | **************************************
[2026-02-09 16:39:09] 2026-02-09 15:38:38,239 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-09 16:39:09] 2026-02-09 15:38:38,252 | INFO     | sufficient remaining disk space (363763597312 B)
[2026-02-09 16:39:09] 2026-02-09 15:38:38,252 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-09 16:39:09] 2026-02-09 15:38:38,252 | INFO     | current server update state: UPDATING_FINAL
[2026-02-09 16:39:09] 2026-02-09 15:38:38,252 | INFO     | update_server=False
[2026-02-09 16:39:09] 2026-02-09 15:38:38,252 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-09 16:39:09] 2026-02-09 15:38:38,253 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-09 16:39:09] 2026-02-09 15:38:38,253 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-09 16:39:09] 2026-02-09 15:38:38,253 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-09 16:39:09] 2026-02-09 15:38:38,330 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-09 16:39:09] 2026-02-09 15:38:38,330 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-09 16:39:09] 2026-02-09 15:38:38,330 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-09 16:39:09] 2026-02-09 15:38:38,330 | INFO     | will abort loop
[2026-02-09 16:39:09] 2026-02-09 15:38:38,444 | INFO     | all data control threads have been joined
[2026-02-09 16:39:09] 2026-02-09 15:38:38,573 | INFO     | all job control threads have been joined
[2026-02-09 16:39:09] 2026-02-09 15:38:38,785 | INFO     | all payload control threads have been joined
[2026-02-09 16:39:09] 2026-02-09 15:38:39,258 | INFO     | [job] retrieve thread has finished
[2026-02-09 16:39:09] 2026-02-09 15:38:39,258 | INFO     | [job] queue monitor thread has finished
[2026-02-09 16:39:09] 2026-02-09 15:38:39,336 | INFO     | [job] job monitor thread has finished
[2026-02-09 16:39:09] 2026-02-09 15:38:39,396 | INFO     | [payload] validate_post thread has finished
[2026-02-09 16:39:09] 2026-02-09 15:38:39,450 | INFO     | [data] control thread has finished
[2026-02-09 16:39:09] 2026-02-09 15:38:39,578 | INFO     | [job] control thread has finished
[2026-02-09 16:39:09] 2026-02-09 15:38:39,791 | INFO     | [payload] control thread has finished
[2026-02-09 16:39:09] 2026-02-09 15:38:40,259 | INFO     | [data] copytool_out thread has finished
[2026-02-09 16:39:09] 2026-02-09 15:38:40,371 | INFO     | [job] validate thread has finished
[2026-02-09 16:39:09] 2026-02-09 15:38:40,389 | INFO     | [payload] failed_post thread has finished
[2026-02-09 16:39:09] 2026-02-09 15:38:40,401 | INFO     | [job] create_data_payload thread has finished
[2026-02-09 16:39:09] 2026-02-09 15:38:40,446 | INFO     | [payload] validate_pre thread has finished
[2026-02-09 16:39:09] 2026-02-09 15:38:40,574 | INFO     | [payload] execute_payloads thread has finished
[2026-02-09 16:39:09] 2026-02-09 15:38:40,584 | INFO     | [data] copytool_in thread has finished
[2026-02-09 16:39:09] 2026-02-09 15:38:42,259 | INFO     | [data] queue_monitor thread has finished
[2026-02-09 16:39:09] 2026-02-09 15:38:48,858 | INFO     | [monitor] cgroup control has ended
[2026-02-09 16:39:09] 2026-02-09 15:38:49,231 | INFO     | job.realtimelogging is not enabled
[2026-02-09 16:39:09] 2026-02-09 15:38:50,237 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-09 16:39:09] 2026-02-09 15:38:51,603 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140098468194112)>', '<ExcThread(monitor, started 140097974417152)>']
[2026-02-09 16:39:09] 2026-02-09 15:38:56,629 | INFO     | all workflow threads have been joined
[2026-02-09 16:39:09] 2026-02-09 15:38:56,629 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-09 16:39:09] 2026-02-09 15:38:56,629 | INFO     | traces error code: 0
[2026-02-09 16:39:09] 2026-02-09 15:38:56,630 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-09 16:39:09] 2026-02-09 15:39:08,994 | INFO     | PID=527110 has CPU usage=0.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-09 16:39:09] 2026-02-09 15:39:08,994 | INFO     | found 0 job(s) in 20 queues
[2026-02-09 16:39:09] 2026-02-09 15:39:08,994 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-09 16:39:09] 2026-02-09 15:39:08,994 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-09 16:39:09] 2026-02-09 15:39:08,994 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-09 16:39:09] 2026-02-09 15:39:08,994 | INFO     | [monitor] control thread has ended
[2026-02-09 16:39:09] 2026-02-09 15:39:09,039 [wrapper] ==== pilot stdout END ====
[2026-02-09 16:39:09] 2026-02-09 15:39:09,041 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-09 16:39:09] 2026-02-09 15:39:09,044 [wrapper] pilotpid: 527110
[2026-02-09 16:39:09] 2026-02-09 15:39:09,046 [wrapper] Pilot exit status: 0
[2026-02-09 16:39:09] 2026-02-09 15:39:09,054 [wrapper] pandaids: 7008293839
[2026-02-09 16:39:09] 2026-02-09 15:39:09,072 [wrapper] cleanup supervisor_pilot  536923 527111
[2026-02-09 16:39:09] 2026-02-09 15:39:09,075 [wrapper] Test setup, not cleaning
[2026-02-09 16:39:09] 2026-02-09 15:39:09,077 [wrapper] apfmon messages muted
[2026-02-09 16:39:09] 2026-02-09 15:39:09,080 [wrapper] ==== wrapper stdout END ====
[2026-02-09 16:39:09] 2026-02-09 15:39:09,082 [wrapper] ==== wrapper stderr END ====
[2026-02-09 16:39:09]  *** Error codes and diagnostics ***
[2026-02-09 16:39:09]     "exeErrorCode": 0,
[2026-02-09 16:39:09]     "exeErrorDiag": "",
[2026-02-09 16:39:09]     "pilotErrorCode": 0,
[2026-02-09 16:39:09]     "pilotErrorDiag": "",
[2026-02-09 16:39:09]  *** Listing of results directory ***
[2026-02-09 16:39:09] total 941156
[2026-02-09 16:39:09] -rw-r--r-- 1 boinc boinc    584627 Feb  8 22:52 pilot3.tar.gz
[2026-02-09 16:39:09] -rwx------ 1 boinc boinc     36322 Feb  8 22:53 runpilot2-wrapper.sh
[2026-02-09 16:39:09] -rw-r--r-- 1 boinc boinc      5111 Feb  8 22:55 queuedata.json
[2026-02-09 16:39:09] -rw-r--r-- 1 boinc boinc       100 Feb  9 14:40 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-09 16:39:09] -rwxr-xr-x 1 boinc boinc      7986 Feb  9 14:40 run_atlas
[2026-02-09 16:39:09] -rw-r--r-- 1 boinc boinc       105 Feb  9 14:40 job.xml
[2026-02-09 16:39:09] -rw-r--r-- 2 boinc boinc 680307836 Feb  9 14:40 EVNT.48431094._000588.pool.root.1
[2026-02-09 16:39:09] -rw-r--r-- 2 boinc boinc    597966 Feb  9 14:40 input.tar.gz
[2026-02-09 16:39:09] -rw-r--r-- 2 boinc boinc     15845 Feb  9 14:40 start_atlas.sh
[2026-02-09 16:39:09] drwxrwx--x 2 boinc boinc      4096 Feb  9 14:40 shared
[2026-02-09 16:39:09] -rw-r--r-- 1 boinc boinc         0 Feb  9 14:40 boinc_setup_complete
[2026-02-09 16:39:09] -rw-r--r-- 1 boinc boinc      6449 Feb  9 14:40 init_data.xml
[2026-02-09 16:39:09] -rw-r--r-- 1 boinc boinc         0 Feb  9 14:40 boinc_lockfile
[2026-02-09 16:39:09] -rw-r--r-- 1 boinc boinc      2556 Feb  9 14:40 pandaJob.out
[2026-02-09 16:39:09] -rw------- 1 boinc boinc   1009480 Feb  9 14:40 agis_schedconf.cvmfs.json
[2026-02-09 16:39:09] -rw------- 1 boinc boinc   1513144 Feb  9 14:40 agis_ddmendpoints.agis.ALL.json
[2026-02-09 16:39:09] -rw------- 1 boinc boinc       427 Feb  9 14:40 workernode_map.json
[2026-02-09 16:39:09] drwx------ 5 boinc boinc      4096 Feb  9 14:40 pilot3
[2026-02-09 16:39:09] -rw-r--r-- 1 boinc boinc       530 Feb  9 16:38 boinc_task_state.xml
[2026-02-09 16:39:09] -rw------- 1 boinc boinc 276830331 Feb  9 16:38 HITS.48431096._012590.pool.root.1
[2026-02-09 16:39:09] -rw------- 1 boinc boinc        95 Feb  9 16:38 pilot_heartbeat.json
[2026-02-09 16:39:09] -rw------- 1 boinc boinc      1030 Feb  9 16:38 memory_monitor_summary.json
[2026-02-09 16:39:09] -rw------- 1 boinc boinc    321039 Feb  9 16:38 log.48431096._012590.job.log.tgz.1
[2026-02-09 16:39:09] -rw------- 1 boinc boinc      6305 Feb  9 16:38 heartbeat.json
[2026-02-09 16:39:09] -rw-r--r-- 1 boinc boinc      8192 Feb  9 16:39 boinc_mmap_file
[2026-02-09 16:39:09] -rw-r--r-- 1 boinc boinc        27 Feb  9 16:39 wrapper_checkpoint.txt
[2026-02-09 16:39:09] -rw------- 1 boinc boinc       746 Feb  9 16:39 pilotlog.txt
[2026-02-09 16:39:09] -rw------- 1 boinc boinc   1015106 Feb  9 16:39 log.48431096._012590.job.log.1
[2026-02-09 16:39:09] -rw------- 1 boinc boinc       357 Feb  9 16:39 output.list
[2026-02-09 16:39:09] -rw-r--r-- 1 boinc boinc       620 Feb  9 16:39 runtime_log
[2026-02-09 16:39:09] -rw------- 1 boinc boinc   1351680 Feb  9 16:39 result.tar.gz
[2026-02-09 16:39:09] -rw-r--r-- 1 boinc boinc      8916 Feb  9 16:39 runtime_log.err
[2026-02-09 16:39:09] -rw------- 1 boinc boinc       661 Feb  9 16:39 MR0KDmvtR98n9Rq4apOajLDm4fhM0noT9bVooX4SDmBxdKDmhaxVom.diag
[2026-02-09 16:39:09] -rw-r--r-- 1 boinc boinc     21318 Feb  9 16:39 stderr.txt
[2026-02-09 16:39:09] HITS file was successfully produced:
[2026-02-09 16:39:09] -rw------- 1 boinc boinc 276830331 Feb  9 16:38 shared/HITS.pool.root.1
[2026-02-09 16:39:09]  *** Contents of shared directory: ***
[2026-02-09 16:39:09] total 936636
[2026-02-09 16:39:09] -rw-r--r-- 2 boinc boinc 680307836 Feb  9 14:40 ATLAS.root_0
[2026-02-09 16:39:09] -rw-r--r-- 2 boinc boinc    597966 Feb  9 14:40 input.tar.gz
[2026-02-09 16:39:09] -rw-r--r-- 2 boinc boinc     15845 Feb  9 14:40 start_atlas.sh
[2026-02-09 16:39:09] -rw------- 1 boinc boinc 276830331 Feb  9 16:38 HITS.pool.root.1
[2026-02-09 16:39:09] -rw------- 1 boinc boinc   1351680 Feb  9 16:39 result.tar.gz
16:39:10 (523055): run_atlas exited; CPU time 20425.390205
16:39:10 (523055): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN