Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:32:54 (3252640): wrapper (7.7.26015): starting
21:32:54 (3252640): wrapper: running run_atlas (--nthreads 12)
[2026-02-08 21:32:54] Arguments: --nthreads 12
[2026-02-08 21:32:54] Threads: 12
[2026-02-08 21:32:54] Checking for CVMFS
[2026-02-08 21:32:55] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-08 21:32:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-08 21:32:55] Running cvmfs_config stat atlas.cern.ch
[2026-02-08 21:32:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-08 21:32:56] 2.11.5.0 1269751 36303 211816 156045 0 437 31467254 45568000 31660 130560 0 362440066 99.845 176622938 24504 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-02-08 21:32:56] CVMFS is ok
[2026-02-08 21:32:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-08 21:32:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-08 21:32:56] Further information can be found at the LHC@home message board.
[2026-02-08 21:32:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-08 21:32:56] Checking for apptainer binary...
[2026-02-08 21:32:56] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-08 21:32:56] Running /usr/bin/apptainer --version
[2026-02-08 21:32:56] apptainer version 1.4.1-1.el9
[2026-02-08 21:32:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-08 21:32:57] wns0072.triumf.lcg
[2026-02-08 21:32:57] apptainer works
[2026-02-08 21:32:57] Set ATHENA_PROC_NUMBER=12
[2026-02-08 21:32:57] Set ATHENA_CORE_NUMBER=12
[2026-02-08 21:32:57] Starting ATLAS job with PandaID=7008496032
[2026-02-08 21:32:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-08 21:38:05]  *** The last 200 lines of the pilot log: ***
[2026-02-08 21:38:05] 2026-02-09 05:37:31,591 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-08 21:38:05] 2026-02-09 05:37:31,591 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-08 21:38:05] 2026-02-09 05:37:31,591 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-08 21:38:05] 2026-02-09 05:37:31,592 | WARNING  | wrong length of table data, x=[1770615275.0], y=[727.0] (must be same and length>=4)
[2026-02-08 21:38:05] 2026-02-09 05:37:31,592 | INFO     | could have reported an average CPU frequency of 2799 MHz (4 samples)
[2026-02-08 21:38:05] 2026-02-09 05:37:31,592 | INFO     | ..............................
[2026-02-08 21:38:05] 2026-02-09 05:37:31,592 | INFO     | . Timing measurements:
[2026-02-08 21:38:05] 2026-02-09 05:37:31,592 | INFO     | . get job = 0 s
[2026-02-08 21:38:05] 2026-02-09 05:37:31,592 | INFO     | . initial setup = 20 s
[2026-02-08 21:38:05] 2026-02-09 05:37:31,592 | INFO     | . payload setup = 23 s
[2026-02-08 21:38:05] 2026-02-09 05:37:31,592 | INFO     | . stage-in = 0 s
[2026-02-08 21:38:05] 2026-02-09 05:37:31,592 | INFO     | . payload execution = 74 s
[2026-02-08 21:38:05] 2026-02-09 05:37:31,592 | INFO     | . stage-out = 0 s
[2026-02-08 21:38:05] 2026-02-09 05:37:31,593 | INFO     | . log creation = 0 s
[2026-02-08 21:38:05] 2026-02-09 05:37:31,593 | INFO     | ..............................
[2026-02-08 21:38:05] 2026-02-09 05:37:31,593 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-08 21:38:05] 2026-02-09 05:37:31,593 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7008496032/pilotlog.txt
[2026-02-08 21:38:05] 2026-02-09 05:37:31,775 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-02-08 21:38:05] - Log from pilotlog.txt -
[2026-02-08 21:38:05] 2026-02-09 05:37:31,582 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7008496032/memory_monitor_summary.json (trf name=prmon)
[2026-02-08 21:38:05] 2026-02-09 05:37:31,591 | INFO     | extracted standard info from prmon json
[2026-02-08 21:38:05] 2026-02-09 05:37:31,591 | INFO     | extracted standard memory fields from prmon json
[2026-02-08 21:38:05] 2026-02-09 05:37:31,591 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-08 21:38:05] 2026-02-09 05:37:31,591 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-08 21:38:05] 2026-02-09 05:37:31,591 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-08 21:38:05] 2026-02-09 05:37:31,592 | WARNING  | wrong length of table data, x=[1770615275.0], y=[727.0] (must be same and length>=4)
[2026-02-08 21:38:05] 2026-02-09 05:37:31,592 | INFO     | could have reported an average CPU frequency of 2799 MHz (4 samples)
[2026-02-08 21:38:05] 2026-02-09 05:37:31,592 | INFO     | ..............................
[2026-02-08 21:38:05] 2026-02-09 05:37:31,592 | INFO     | . Timing measurements:
[2026-02-08 21:38:05] 2026-02-09 05:37:31,592 | INFO     | . get job = 0 s
[2026-02-08 21:38:05] 2026-02-09 05:37:31,592 | INFO     | . initial setup = 20 s
[2026-02-08 21:38:05] 2026-02-09 05:37:31,592 | INFO     | . payload setup = 23 s
[2026-02-08 21:38:05] 2026-02-09 05:37:31,592 | INFO     | . stage-in = 0 s
[2026-02-08 21:38:05] 2026-02-09 05:37:31,592 | INFO     | . payload execution = 74 s
[2026-02-08 21:38:05] 2026-02-09 05:37:31,592 | INFO     | . stage-out = 0 s
[2026-02-08 21:38:05] 2026-02-09 05:37:31,593 | INFO     | . log creation = 0 s
[2026-02-08 21:38:05] 2026-02-09 05:37:31,593 | INFO     | ..............................
[2026-02-08 21:38:05] 2026-02-09 05:37:31,593 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-08 21:38:05] 2026-02-09 05:37:31,593 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7008496032/pilotlog.txt
[2026-02-08 21:38:05] 2026-02-09 05:37:31,775 | WARNING  | 
[2026-02-08 21:38:05] [begin log extracts]
[2026-02-08 21:38:05] - Log from pilotlog.txt -
[2026-02-08 21:38:05] 2026-02-09 05:37:31,582 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7008496032/memory_monitor_summary.json (trf name=prmon)
[2026-02-08 21:38:05] 2026-02-09 05:37:31,591 | INFO     | extracted standard info from prmon json
[2026-02-08 21:38:05] 2026-02-09 05:37:31,591 | INFO     | extracted standard memory fields from prmon json
[2026-02-08 21:38:05] 2026-02-09 05:37:31,591 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-08 21:38:05] 2026-02-09 05:37:31,591 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-08 21:38:05] 2026-02-09 05:37:31,591 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-08 21:38:05] 2026-02-09 05:37:31,592 | WARNING  | wrong length of table data, x=[1770615275.0], y=[727.0] (must be same and length>=4)
[2026-02-08 21:38:05] 2026-02-09 05:37:31,592 | INFO     | could have reported an average CPU frequency of 2799 MHz (4 samples)
[2026-02-08 21:38:05] 2026-02-09 05:37:31,592 | INFO     | ..............................
[2026-02-08 21:38:05] 2026-02-09 05:37:31,592 | INFO     | . Timing measurements:
[2026-02-08 21:38:05] 2026-02-09 05:37:31,592 | INFO     | . get job = 0 s
[2026-02-08 21:38:05] 2026-02-09 05:37:31,592 | INFO     | . initial setup = 20 s
[2026-02-08 21:38:05] 2026-02-09 05:37:31,592 | INFO     | . payload setup = 23 s
[2026-02-08 21:38:05] 2026-02-09 05:37:31,592 | INFO     | . stage-in = 0 s
[2026-02-08 21:38:05] 2026-02-09 05:37:31,592 | INFO     | . payload execution = 74 s
[2026-02-08 21:38:05] 2026-02-09 05:37:31,592 | INFO     | . stage-out = 0 s
[2026-02-08 21:38:05] 2026-02-09 05:37:31,593 | INFO     | . log creation = 0 s
[2026-02-08 21:38:05] 2026-02-09 05:37:31,593 | INFO     | ..............................
[2026-02-08 21:38:05] 2026-02-09 05:37:31,593 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-08 21:38:05] 2026-02-09 05:37:31,593 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7008496032/pilotlog.txt
[2026-02-08 21:38:05] [end log extracts]
[2026-02-08 21:38:05] 2026-02-09 05:37:31,775 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-02-08 21:38:05] 2026-02-09 05:37:31,776 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-02-08 21:38:05] 2026-02-09 05:37:31,920 | INFO     | 
[2026-02-08 21:38:05] 2026-02-09 05:37:31,921 | INFO     | job summary report
[2026-02-08 21:38:05] 2026-02-09 05:37:31,921 | INFO     | --------------------------------------------------
[2026-02-08 21:38:05] 2026-02-09 05:37:31,921 | INFO     | PanDA job id: 7008496032
[2026-02-08 21:38:05] 2026-02-09 05:37:31,921 | INFO     | task id: 48431096
[2026-02-08 21:38:05] 2026-02-09 05:37:31,921 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-02-08 21:35:21,818 CRITICAL Transform executor raised TransformValidationExceptio
[2026-02-08 21:38:05] 2026-02-09 05:37:31,921 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-08 21:38:05] 2026-02-09 05:37:31,921 | INFO     | pilot state: failed 
[2026-02-08 21:38:05] 2026-02-09 05:37:31,921 | INFO     | transexitcode: 65
[2026-02-08 21:38:05] 2026-02-09 05:37:31,921 | INFO     | exeerrorcode: 65
[2026-02-08 21:38:05] 2026-02-09 05:37:31,921 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-02-08 21:38:05] 2026-02-09 05:37:31,921 | INFO     | exitcode: 65
[2026-02-08 21:38:05] 2026-02-09 05:37:31,921 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-02-08 21:38:05] 2026-02-09 05:37:31,921 | INFO     | cpuconsumptiontime: 13 s
[2026-02-08 21:38:05] 2026-02-09 05:37:31,921 | INFO     | nevents: 0
[2026-02-08 21:38:05] 2026-02-09 05:37:31,921 | INFO     | neventsw: 0
[2026-02-08 21:38:05] 2026-02-09 05:37:31,921 | INFO     | pid: 3261186
[2026-02-08 21:38:05] 2026-02-09 05:37:31,921 | INFO     | pgrp: 3261186
[2026-02-08 21:38:05] 2026-02-09 05:37:31,921 | INFO     | corecount: 12
[2026-02-08 21:38:05] 2026-02-09 05:37:31,922 | INFO     | event service: False
[2026-02-08 21:38:05] 2026-02-09 05:37:31,922 | INFO     | sizes: {0: 2282650, 1: 2283111, 103: 2306418, 104: 2310710, 105: 2310738, 223: 2310904}
[2026-02-08 21:38:05] 2026-02-09 05:37:31,922 | INFO     | --------------------------------------------------
[2026-02-08 21:38:05] 2026-02-09 05:37:31,922 | INFO     | 
[2026-02-08 21:38:05] 2026-02-09 05:37:31,922 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-02-08 21:38:05] 2026-02-09 05:37:31,937 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-08 21:38:05] 2026-02-09 05:37:31,937 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-08 21:38:05] 2026-02-09 05:37:31,937 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-08 21:38:05] 2026-02-09 05:37:31,937 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-08 21:38:05] 2026-02-09 05:37:31,937 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-08 21:38:05] 2026-02-09 05:37:31,937 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-08 21:38:05] 2026-02-09 05:37:31,937 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-08 21:38:05] 2026-02-09 05:37:31,937 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-08 21:38:05] 2026-02-09 05:37:31,937 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-08 21:38:05] 2026-02-09 05:37:31,937 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-08 21:38:05] 2026-02-09 05:37:31,937 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-08 21:38:05] 2026-02-09 05:37:31,937 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-08 21:38:05] 2026-02-09 05:37:31,937 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-08 21:38:05] 2026-02-09 05:37:31,937 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-08 21:38:05] 2026-02-09 05:37:31,937 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-08 21:38:05] 2026-02-09 05:37:31,938 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-08 21:38:05] 2026-02-09 05:37:31,938 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-08 21:38:05] 2026-02-09 05:37:31,938 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-08 21:38:05] 2026-02-09 05:37:31,938 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-08 21:38:05] 2026-02-09 05:37:31,938 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-08 21:38:05] 2026-02-09 05:37:31,938 | INFO     | job 7008496032 has completed (purged errors)
[2026-02-08 21:38:05] 2026-02-09 05:37:31,938 | INFO     | overall cleanup function is called
[2026-02-08 21:38:05] 2026-02-09 05:37:32,945 | INFO     | --- collectZombieJob: --- 10, [3261186]
[2026-02-08 21:38:05] 2026-02-09 05:37:32,945 | INFO     | zombie collector waiting for pid 3261186
[2026-02-08 21:38:05] 2026-02-09 05:37:32,945 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-08 21:38:05] 2026-02-09 05:37:32,945 | INFO     | collected zombie processes
[2026-02-08 21:38:05] 2026-02-09 05:37:32,945 | INFO     | will attempt to kill all subprocesses of pid=3261186
[2026-02-08 21:38:05] 2026-02-09 05:37:33,613 | INFO     | process IDs to be killed: [3261186] (in reverse order)
[2026-02-08 21:38:05] 2026-02-09 05:37:34,008 | WARNING  | found no corresponding commands to process id(s)
[2026-02-08 21:38:05] 2026-02-09 05:37:34,009 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-08 21:38:05] 2026-02-09 05:37:34,046 | INFO     | did not find any defunct processes belonging to 3261186
[2026-02-08 21:38:05] 2026-02-09 05:37:34,093 | INFO     | did not find any defunct processes belonging to 3261186
[2026-02-08 21:38:05] 2026-02-09 05:37:34,093 | INFO     | ready for new job
[2026-02-08 21:38:05] 2026-02-09 05:37:34,107 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-08 21:38:05] 2026-02-09 05:37:34,108 | INFO     | **************************************
[2026-02-08 21:38:05] 2026-02-09 05:37:34,108 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-08 21:38:05] 2026-02-09 05:37:34,108 | INFO     | **************************************
[2026-02-08 21:38:05] 2026-02-09 05:37:34,108 | INFO     | 
[2026-02-08 21:38:05] 2026-02-09 05:37:34,110 | INFO     | architecture information:
[2026-02-08 21:38:05] 2026-02-09 05:37:34,129 | INFO     | executing command: cat /etc/os-release
[2026-02-08 21:38:05] 2026-02-09 05:37:34,261 | INFO     | cat /etc/os-release:
[2026-02-08 21:38:05] NAME="CentOS Linux"
[2026-02-08 21:38:05] VERSION="7 (Core)"
[2026-02-08 21:38:05] ID="centos"
[2026-02-08 21:38:05] ID_LIKE="rhel fedora"
[2026-02-08 21:38:05] VERSION_ID="7"
[2026-02-08 21:38:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-08 21:38:05] ANSI_COLOR="0;31"
[2026-02-08 21:38:05] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-08 21:38:05] HOME_URL="https://www.centos.org/"
[2026-02-08 21:38:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-08 21:38:05] 
[2026-02-08 21:38:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-08 21:38:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-08 21:38:05] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-08 21:38:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-08 21:38:05] 
[2026-02-08 21:38:05] 2026-02-09 05:37:34,261 | INFO     | **************************************
[2026-02-08 21:38:05] 2026-02-09 05:37:34,780 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-02-08 21:38:05] 2026-02-09 05:37:34,826 | INFO     | sufficient remaining disk space (2150596870144 B)
[2026-02-08 21:38:05] 2026-02-09 05:37:34,826 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-08 21:38:05] 2026-02-09 05:37:34,827 | INFO     | current server update state: UPDATING_FINAL
[2026-02-08 21:38:05] 2026-02-09 05:37:34,827 | INFO     | update_server=False
[2026-02-08 21:38:05] 2026-02-09 05:37:34,827 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-08 21:38:05] 2026-02-09 05:37:34,828 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-08 21:38:05] 2026-02-09 05:37:34,831 | INFO     | all data control threads have been joined
[2026-02-08 21:38:05] 2026-02-09 05:37:34,875 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-08 21:38:05] 2026-02-09 05:37:34,875 | INFO     | aborting loop
[2026-02-08 21:38:05] 2026-02-09 05:37:35,204 | INFO     | all payload control threads have been joined
[2026-02-08 21:38:05] 2026-02-09 05:37:35,623 | INFO     | all job control threads have been joined
[2026-02-08 21:38:05] 2026-02-09 05:37:35,837 | INFO     | [job] retrieve thread has finished
[2026-02-08 21:38:05] 2026-02-09 05:37:35,841 | INFO     | [data] control thread has finished
[2026-02-08 21:38:05] 2026-02-09 05:37:35,881 | INFO     | [job] job monitor thread has finished
[2026-02-08 21:38:05] 2026-02-09 05:37:35,936 | INFO     | [job] create_data_payload thread has finished
[2026-02-08 21:38:05] 2026-02-09 05:37:36,210 | INFO     | [payload] control thread has finished
[2026-02-08 21:38:05] 2026-02-09 05:37:36,629 | INFO     | [job] control thread has finished
[2026-02-08 21:38:05] 2026-02-09 05:37:36,685 | INFO     | [payload] execute_payloads thread has finished
[2026-02-08 21:38:05] 2026-02-09 05:37:36,685 | INFO     | [payload] validate_pre thread has finished
[2026-02-08 21:38:05] 2026-02-09 05:37:36,736 | INFO     | [data] copytool_in thread has finished
[2026-02-08 21:38:05] 2026-02-09 05:37:36,806 | INFO     | [payload] validate_post thread has finished
[2026-02-08 21:38:05] 2026-02-09 05:37:36,835 | INFO     | [data] copytool_out thread has finished
[2026-02-08 21:38:05] 2026-02-09 05:37:36,955 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-08 21:38:05] 2026-02-09 05:37:36,986 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-08 21:38:05] 2026-02-09 05:37:36,992 | INFO     | [job] validate thread has finished
[2026-02-08 21:38:05] 2026-02-09 05:37:37,371 | INFO     | [payload] failed_post thread has finished
[2026-02-08 21:38:05] 2026-02-09 05:37:37,418 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-08 21:38:05] 2026-02-09 05:37:37,961 | INFO     | [job] queue monitor thread has finished
[2026-02-08 21:38:05] 2026-02-09 05:37:41,426 | INFO     | [data] queue_monitor thread has finished
[2026-02-08 21:38:05] 2026-02-09 05:37:47,216 | INFO     | [monitor] cgroup control has ended
[2026-02-08 21:38:05] 2026-02-09 05:37:48,089 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139843735537472)>', '<ExcThread(monitor, started 139843415807744)>']
[2026-02-08 21:38:05] 2026-02-09 05:37:53,115 | INFO     | all workflow threads have been joined
[2026-02-08 21:38:05] 2026-02-09 05:37:53,115 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-08 21:38:05] 2026-02-09 05:37:53,115 | INFO     | traces error code: 0
[2026-02-08 21:38:05] 2026-02-09 05:37:53,115 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-08 21:38:05] 2026-02-09 05:38:04,021 | INFO     | PID=3256420 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-08 21:38:05] 2026-02-09 05:38:04,021 | INFO     | .. there are 49 such processes running
[2026-02-08 21:38:05] 2026-02-09 05:38:04,022 | INFO     | found 0 job(s) in 20 queues
[2026-02-08 21:38:05] 2026-02-09 05:38:04,022 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-08 21:38:05] 2026-02-09 05:38:04,022 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-08 21:38:05] 2026-02-09 05:38:04,022 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-08 21:38:05] 2026-02-09 05:38:04,022 | INFO     | [monitor] control thread has ended
[2026-02-08 21:38:05] 2026-02-09 05:38:04,122 [wrapper] ==== pilot stdout END ====
[2026-02-08 21:38:05] 2026-02-09 05:38:04,124 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-08 21:38:05] 2026-02-09 05:38:04,125 [wrapper] pilotpid: 3256420
[2026-02-08 21:38:05] 2026-02-09 05:38:04,127 [wrapper] Pilot exit status: 0
[2026-02-08 21:38:05] 2026-02-09 05:38:04,215 [wrapper] pandaids: 7008496032
[2026-02-08 21:38:05] 2026-02-09 05:38:04,439 [wrapper] cleanup supervisor_pilot 3256430 3256421
[2026-02-08 21:38:05] 2026-02-09 05:38:04,448 [wrapper] Test setup, not cleaning
[2026-02-08 21:38:05] 2026-02-09 05:38:04,473 [wrapper] apfmon messages muted
[2026-02-08 21:38:05] 2026-02-09 05:38:04,486 [wrapper] ==== wrapper stdout END ====
[2026-02-08 21:38:05] 2026-02-09 05:38:04,515 [wrapper] ==== wrapper stderr END ====
[2026-02-08 21:38:05]  *** Error codes and diagnostics ***
[2026-02-08 21:38:05]     "exeErrorCode": 65,
[2026-02-08 21:38:05]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-02-08 21:38:05]     "pilotErrorCode": 1305,
[2026-02-08 21:38:05]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-02-08 21:38:05]  *** Listing of results directory ***
[2026-02-08 21:38:05] total 667804
[2026-02-08 21:38:05] -rw-r--r--. 1 boinc boinc    602657 Feb  3 03:11 pilot3.tar.gz
[2026-02-08 21:38:05] -rwx------. 1 boinc boinc     36322 Feb  8 17:57 runpilot2-wrapper.sh
[2026-02-08 21:38:05] -rw-r--r--. 1 boinc boinc      5111 Feb  8 17:59 queuedata.json
[2026-02-08 21:38:05] -rw-r--r--. 1 boinc boinc       100 Feb  8 21:32 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-08 21:38:05] -rwxr-xr-x. 1 boinc boinc      7986 Feb  8 21:32 run_atlas
[2026-02-08 21:38:05] -rw-r--r--. 1 boinc boinc       105 Feb  8 21:32 job.xml
[2026-02-08 21:38:05] -rw-r--r--. 2 boinc boinc 679626330 Feb  8 21:32 EVNT.48431094._000606.pool.root.1
[2026-02-08 21:38:05] drwxrwx--x. 2 boinc boinc      4096 Feb  8 21:32 shared
[2026-02-08 21:38:05] -rw-r--r--. 2 boinc boinc    616315 Feb  8 21:32 input.tar.gz
[2026-02-08 21:38:05] -rw-r--r--. 1 boinc boinc      6594 Feb  8 21:32 init_data.xml
[2026-02-08 21:38:05] -rw-r--r--. 2 boinc boinc     15845 Feb  8 21:32 start_atlas.sh
[2026-02-08 21:38:05] -rw-r--r--. 1 boinc boinc         0 Feb  8 21:32 boinc_lockfile
[2026-02-08 21:38:05] -rw-r--r--. 1 boinc boinc      2556 Feb  8 21:32 pandaJob.out
[2026-02-08 21:38:05] -rw-------. 1 boinc boinc   1009512 Feb  8 21:33 agis_schedconf.cvmfs.json
[2026-02-08 21:38:05] -rw-------. 1 boinc boinc   1513088 Feb  8 21:33 agis_ddmendpoints.agis.ALL.json
[2026-02-08 21:38:05] -rw-------. 1 boinc boinc       445 Feb  8 21:33 workernode_map.json
[2026-02-08 21:38:05] drwx------. 7 boinc boinc      4096 Feb  8 21:33 pilot3
[2026-02-08 21:38:05] -rw-r--r--. 1 boinc boinc       525 Feb  8 21:35 boinc_task_state.xml
[2026-02-08 21:38:05] -rw-------. 1 boinc boinc       962 Feb  8 21:35 memory_monitor_summary.json
[2026-02-08 21:38:05] -rw-------. 1 boinc boinc     21816 Feb  8 21:35 log.48431096._013509.job.log.tgz.1
[2026-02-08 21:38:05] -rw-------. 1 boinc boinc      7013 Feb  8 21:37 heartbeat.json
[2026-02-08 21:38:05] -rw-r--r--. 1 boinc boinc      8192 Feb  8 21:38 boinc_mmap_file
[2026-02-08 21:38:05] -rw-------. 1 boinc boinc        95 Feb  8 21:38 pilot_heartbeat.json
[2026-02-08 21:38:05] -rw-------. 1 boinc boinc       823 Feb  8 21:38 pilotlog.txt
[2026-02-08 21:38:05] -rw-r--r--. 1 boinc boinc        22 Feb  8 21:38 wrapper_checkpoint.txt
[2026-02-08 21:38:05] -rw-------. 1 boinc boinc     91577 Feb  8 21:38 log.48431096._013509.job.log.1
[2026-02-08 21:38:05] -rw-------. 1 boinc boinc       188 Feb  8 21:38 output.list
[2026-02-08 21:38:05] -rw-r--r--. 1 boinc boinc       620 Feb  8 21:38 runtime_log
[2026-02-08 21:38:05] -rw-------. 1 boinc boinc    133120 Feb  8 21:38 result.tar.gz
[2026-02-08 21:38:05] -rw-r--r--. 1 boinc boinc      8635 Feb  8 21:38 runtime_log.err
[2026-02-08 21:38:05] -rw-------. 1 boinc boinc       643 Feb  8 21:38 r47KDmFiV98n9Rq4apOajLDm4fhM0noT9bVooX4SDmuIeKDmHNJMrn.diag
[2026-02-08 21:38:05] -rw-r--r--. 1 boinc boinc     21767 Feb  8 21:38 stderr.txt
[2026-02-08 21:38:05] No HITS result produced
[2026-02-08 21:38:05]  *** Contents of shared directory: ***
[2026-02-08 21:38:05] total 664456
[2026-02-08 21:38:05] -rw-r--r--. 2 boinc boinc 679626330 Feb  8 21:32 ATLAS.root_0
[2026-02-08 21:38:05] -rw-r--r--. 2 boinc boinc    616315 Feb  8 21:32 input.tar.gz
[2026-02-08 21:38:05] -rw-r--r--. 2 boinc boinc     15845 Feb  8 21:32 start_atlas.sh
[2026-02-08 21:38:05] -rw-------. 1 boinc boinc    133120 Feb  8 21:38 result.tar.gz
21:38:07 (3252640): run_atlas exited; CPU time 22.660857
21:38:07 (3252640): called boinc_finish(0)

</stderr_txt>
]]>

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