Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:39:28 (13511): wrapper (7.7.26015): starting
21:39:28 (13511): wrapper: running run_atlas (--nthreads 8)
[2026-02-08 21:39:28] Arguments: --nthreads 8
[2026-02-08 21:39:28] Threads: 8
[2026-02-08 21:39:28] Checking for CVMFS
[2026-02-08 21:39:28] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-08 21:39:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-08 21:39:29] Running cvmfs_config stat atlas.cern.ch
[2026-02-08 21:39:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-08 21:39:29] 2.11.3.0 323444 135977 208648 156045 2 198 43579107 45568000 20668 130560 0 852380762 99.823 463580318 18501 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-02-08 21:39:29] CVMFS is ok
[2026-02-08 21:39:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-08 21:39:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-08 21:39:29] Further information can be found at the LHC@home message board.
[2026-02-08 21:39:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-08 21:39:29] Checking for apptainer binary...
[2026-02-08 21:39:29] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-08 21:39:29] Running /usr/bin/apptainer --version
[2026-02-08 21:39:29] apptainer version 1.4.1-1.el9
[2026-02-08 21:39:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-08 21:39:29] wns0003.triumf.lcg
[2026-02-08 21:39:29] apptainer works
[2026-02-08 21:39:30] Set ATHENA_PROC_NUMBER=8
[2026-02-08 21:39:30] Set ATHENA_CORE_NUMBER=8
[2026-02-08 21:39:30] Starting ATLAS job with PandaID=7008495406
[2026-02-08 21:39:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-08 21:47:53]  *** The last 200 lines of the pilot log: ***
[2026-02-08 21:47:53] 2026-02-09 05:47:18,430 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-08 21:47:53] 2026-02-09 05:47:18,430 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-08 21:47:53] 2026-02-09 05:47:18,430 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-08 21:47:53] 2026-02-09 05:47:18,431 | WARNING  | wrong length of table data, x=[1770615790.0, 1770615851.0], y=[1365.0, 404655.0] (must be same and length>=4)
[2026-02-08 21:47:53] 2026-02-09 05:47:18,431 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-02-08 21:47:53] 2026-02-09 05:47:18,431 | INFO     | ..............................
[2026-02-08 21:47:53] 2026-02-09 05:47:18,431 | INFO     | . Timing measurements:
[2026-02-08 21:47:53] 2026-02-09 05:47:18,431 | INFO     | . get job = 0 s
[2026-02-08 21:47:53] 2026-02-09 05:47:18,431 | INFO     | . initial setup = 39 s
[2026-02-08 21:47:53] 2026-02-09 05:47:18,431 | INFO     | . payload setup = 71 s
[2026-02-08 21:47:53] 2026-02-09 05:47:18,431 | INFO     | . stage-in = 0 s
[2026-02-08 21:47:53] 2026-02-09 05:47:18,431 | INFO     | . payload execution = 175 s
[2026-02-08 21:47:53] 2026-02-09 05:47:18,431 | INFO     | . stage-out = 0 s
[2026-02-08 21:47:53] 2026-02-09 05:47:18,431 | INFO     | . log creation = 0 s
[2026-02-08 21:47:53] 2026-02-09 05:47:18,432 | INFO     | ..............................
[2026-02-08 21:47:53] 2026-02-09 05:47:18,432 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-08 21:47:53] 2026-02-09 05:47:18,432 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7008495406/pilotlog.txt
[2026-02-08 21:47:53] 2026-02-09 05:47:18,808 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-02-08 21:47:53] - Log from pilotlog.txt -
[2026-02-08 21:47:53] 2026-02-09 05:47:18,429 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7008495406/memory_monitor_summary.json (trf name=prmon)
[2026-02-08 21:47:53] 2026-02-09 05:47:18,430 | INFO     | extracted standard info from prmon json
[2026-02-08 21:47:53] 2026-02-09 05:47:18,430 | INFO     | extracted standard memory fields from prmon json
[2026-02-08 21:47:53] 2026-02-09 05:47:18,430 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-08 21:47:53] 2026-02-09 05:47:18,430 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-08 21:47:53] 2026-02-09 05:47:18,430 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-08 21:47:53] 2026-02-09 05:47:18,431 | WARNING  | wrong length of table data, x=[1770615790.0, 1770615851.0], y=[1365.0, 404655.0] (must be same and length>=4)
[2026-02-08 21:47:53] 2026-02-09 05:47:18,431 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-02-08 21:47:53] 2026-02-09 05:47:18,431 | INFO     | ..............................
[2026-02-08 21:47:53] 2026-02-09 05:47:18,431 | INFO     | . Timing measurements:
[2026-02-08 21:47:53] 2026-02-09 05:47:18,431 | INFO     | . get job = 0 s
[2026-02-08 21:47:53] 2026-02-09 05:47:18,431 | INFO     | . initial setup = 39 s
[2026-02-08 21:47:53] 2026-02-09 05:47:18,431 | INFO     | . payload setup = 71 s
[2026-02-08 21:47:53] 2026-02-09 05:47:18,431 | INFO     | . stage-in = 0 s
[2026-02-08 21:47:53] 2026-02-09 05:47:18,431 | INFO     | . payload execution = 175 s
[2026-02-08 21:47:53] 2026-02-09 05:47:18,431 | INFO     | . stage-out = 0 s
[2026-02-08 21:47:53] 2026-02-09 05:47:18,431 | INFO     | . log creation = 0 s
[2026-02-08 21:47:53] 2026-02-09 05:47:18,432 | INFO     | ..............................
[2026-02-08 21:47:53] 2026-02-09 05:47:18,432 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-08 21:47:53] 2026-02-09 05:47:18,432 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7008495406/pilotlog.txt
[2026-02-08 21:47:53] 2026-02-09 05:47:18,809 | WARNING  | 
[2026-02-08 21:47:53] [begin log extracts]
[2026-02-08 21:47:53] - Log from pilotlog.txt -
[2026-02-08 21:47:53] 2026-02-09 05:47:18,429 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7008495406/memory_monitor_summary.json (trf name=prmon)
[2026-02-08 21:47:53] 2026-02-09 05:47:18,430 | INFO     | extracted standard info from prmon json
[2026-02-08 21:47:53] 2026-02-09 05:47:18,430 | INFO     | extracted standard memory fields from prmon json
[2026-02-08 21:47:53] 2026-02-09 05:47:18,430 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-08 21:47:53] 2026-02-09 05:47:18,430 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-08 21:47:53] 2026-02-09 05:47:18,430 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-08 21:47:53] 2026-02-09 05:47:18,431 | WARNING  | wrong length of table data, x=[1770615790.0, 1770615851.0], y=[1365.0, 404655.0] (must be same and length>=4)
[2026-02-08 21:47:53] 2026-02-09 05:47:18,431 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-02-08 21:47:53] 2026-02-09 05:47:18,431 | INFO     | ..............................
[2026-02-08 21:47:53] 2026-02-09 05:47:18,431 | INFO     | . Timing measurements:
[2026-02-08 21:47:53] 2026-02-09 05:47:18,431 | INFO     | . get job = 0 s
[2026-02-08 21:47:53] 2026-02-09 05:47:18,431 | INFO     | . initial setup = 39 s
[2026-02-08 21:47:53] 2026-02-09 05:47:18,431 | INFO     | . payload setup = 71 s
[2026-02-08 21:47:53] 2026-02-09 05:47:18,431 | INFO     | . stage-in = 0 s
[2026-02-08 21:47:53] 2026-02-09 05:47:18,431 | INFO     | . payload execution = 175 s
[2026-02-08 21:47:53] 2026-02-09 05:47:18,431 | INFO     | . stage-out = 0 s
[2026-02-08 21:47:53] 2026-02-09 05:47:18,431 | INFO     | . log creation = 0 s
[2026-02-08 21:47:53] 2026-02-09 05:47:18,432 | INFO     | ..............................
[2026-02-08 21:47:53] 2026-02-09 05:47:18,432 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-08 21:47:53] 2026-02-09 05:47:18,432 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7008495406/pilotlog.txt
[2026-02-08 21:47:53] [end log extracts]
[2026-02-08 21:47:53] 2026-02-09 05:47:18,809 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-02-08 21:47:53] 2026-02-09 05:47:18,809 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-02-08 21:47:53] 2026-02-09 05:47:19,449 | INFO     | 
[2026-02-08 21:47:53] 2026-02-09 05:47:19,450 | INFO     | job summary report
[2026-02-08 21:47:53] 2026-02-09 05:47:19,450 | INFO     | --------------------------------------------------
[2026-02-08 21:47:53] 2026-02-09 05:47:19,450 | INFO     | PanDA job id: 7008495406
[2026-02-08 21:47:53] 2026-02-09 05:47:19,450 | INFO     | task id: 48431096
[2026-02-08 21:47:53] 2026-02-09 05:47:19,451 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-02-08 21:44:57,926 CRITICAL Transform executor raised TransformValidationExceptio
[2026-02-08 21:47:53] 2026-02-09 05:47:19,451 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-08 21:47:53] 2026-02-09 05:47:19,451 | INFO     | pilot state: failed 
[2026-02-08 21:47:53] 2026-02-09 05:47:19,451 | INFO     | transexitcode: 65
[2026-02-08 21:47:53] 2026-02-09 05:47:19,451 | INFO     | exeerrorcode: 65
[2026-02-08 21:47:53] 2026-02-09 05:47:19,451 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-02-08 21:47:53] 2026-02-09 05:47:19,477 | INFO     | exitcode: 65
[2026-02-08 21:47:53] 2026-02-09 05:47:19,477 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-02-08 21:47:53] 2026-02-09 05:47:19,477 | INFO     | cpuconsumptiontime: 17 s
[2026-02-08 21:47:53] 2026-02-09 05:47:19,477 | INFO     | nevents: 0
[2026-02-08 21:47:53] 2026-02-09 05:47:19,477 | INFO     | neventsw: 0
[2026-02-08 21:47:53] 2026-02-09 05:47:19,477 | INFO     | pid: 22447
[2026-02-08 21:47:53] 2026-02-09 05:47:19,478 | INFO     | pgrp: 22447
[2026-02-08 21:47:53] 2026-02-09 05:47:19,478 | INFO     | corecount: 8
[2026-02-08 21:47:53] 2026-02-09 05:47:19,478 | INFO     | event service: False
[2026-02-08 21:47:53] 2026-02-09 05:47:19,478 | INFO     | sizes: {0: 2281996, 1: 2282678, 2: 2282678, 3: 2282706, 5: 2282706, 6: 2283351, 17: 2283351, 252: 2306600, 253: 2306604, 254: 2310924, 257: 2310952, 375: 2311426}
[2026-02-08 21:47:53] 2026-02-09 05:47:19,478 | INFO     | --------------------------------------------------
[2026-02-08 21:47:53] 2026-02-09 05:47:19,478 | INFO     | 
[2026-02-08 21:47:53] 2026-02-09 05:47:19,478 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-02-08 21:47:53] 2026-02-09 05:47:20,113 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-08 21:47:53] 2026-02-09 05:47:20,114 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-08 21:47:53] 2026-02-09 05:47:20,114 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-08 21:47:53] 2026-02-09 05:47:20,114 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-08 21:47:53] 2026-02-09 05:47:20,114 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-08 21:47:53] 2026-02-09 05:47:20,114 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-08 21:47:53] 2026-02-09 05:47:20,114 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-08 21:47:53] 2026-02-09 05:47:20,114 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-08 21:47:53] 2026-02-09 05:47:20,114 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-08 21:47:53] 2026-02-09 05:47:20,114 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-08 21:47:53] 2026-02-09 05:47:20,114 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-08 21:47:53] 2026-02-09 05:47:20,115 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-08 21:47:53] 2026-02-09 05:47:20,115 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-08 21:47:53] 2026-02-09 05:47:20,115 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-08 21:47:53] 2026-02-09 05:47:20,115 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-08 21:47:53] 2026-02-09 05:47:20,115 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-08 21:47:53] 2026-02-09 05:47:20,115 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-08 21:47:53] 2026-02-09 05:47:20,115 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-08 21:47:53] 2026-02-09 05:47:20,115 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-08 21:47:53] 2026-02-09 05:47:20,115 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-08 21:47:53] 2026-02-09 05:47:20,115 | INFO     | job 7008495406 has completed (purged errors)
[2026-02-08 21:47:53] 2026-02-09 05:47:20,115 | INFO     | overall cleanup function is called
[2026-02-08 21:47:53] 2026-02-09 05:47:21,143 | INFO     | --- collectZombieJob: --- 10, [22447]
[2026-02-08 21:47:53] 2026-02-09 05:47:21,143 | INFO     | zombie collector waiting for pid 22447
[2026-02-08 21:47:53] 2026-02-09 05:47:21,143 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-08 21:47:53] 2026-02-09 05:47:21,143 | INFO     | collected zombie processes
[2026-02-08 21:47:53] 2026-02-09 05:47:21,144 | INFO     | will attempt to kill all subprocesses of pid=22447
[2026-02-08 21:47:53] 2026-02-09 05:47:22,659 | INFO     | process IDs to be killed: [22447] (in reverse order)
[2026-02-08 21:47:53] 2026-02-09 05:47:23,220 | WARNING  | found no corresponding commands to process id(s)
[2026-02-08 21:47:53] 2026-02-09 05:47:23,221 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-08 21:47:53] 2026-02-09 05:47:23,267 | INFO     | did not find any defunct processes belonging to 22447
[2026-02-08 21:47:53] 2026-02-09 05:47:23,308 | INFO     | did not find any defunct processes belonging to 22447
[2026-02-08 21:47:53] 2026-02-09 05:47:23,308 | INFO     | ready for new job
[2026-02-08 21:47:53] 2026-02-09 05:47:23,308 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-08 21:47:53] 2026-02-09 05:47:23,310 | INFO     | **************************************
[2026-02-08 21:47:53] 2026-02-09 05:47:23,310 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-08 21:47:53] 2026-02-09 05:47:23,310 | INFO     | **************************************
[2026-02-08 21:47:53] 2026-02-09 05:47:23,310 | INFO     | 
[2026-02-08 21:47:53] 2026-02-09 05:47:23,312 | INFO     | architecture information:
[2026-02-08 21:47:53] 2026-02-09 05:47:23,340 | INFO     | executing command: cat /etc/os-release
[2026-02-08 21:47:53] 2026-02-09 05:47:23,494 | INFO     | cat /etc/os-release:
[2026-02-08 21:47:53] NAME="CentOS Linux"
[2026-02-08 21:47:53] VERSION="7 (Core)"
[2026-02-08 21:47:53] ID="centos"
[2026-02-08 21:47:53] ID_LIKE="rhel fedora"
[2026-02-08 21:47:53] VERSION_ID="7"
[2026-02-08 21:47:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-08 21:47:53] ANSI_COLOR="0;31"
[2026-02-08 21:47:53] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-08 21:47:53] HOME_URL="https://www.centos.org/"
[2026-02-08 21:47:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-08 21:47:53] 
[2026-02-08 21:47:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-08 21:47:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-08 21:47:53] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-08 21:47:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-08 21:47:53] 
[2026-02-08 21:47:53] 2026-02-09 05:47:23,494 | INFO     | **************************************
[2026-02-08 21:47:53] 2026-02-09 05:47:23,998 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-02-08 21:47:53] 2026-02-09 05:47:24,103 | INFO     | sufficient remaining disk space (1380749148160 B)
[2026-02-08 21:47:53] 2026-02-09 05:47:24,104 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-08 21:47:53] 2026-02-09 05:47:24,104 | INFO     | current server update state: UPDATING_FINAL
[2026-02-08 21:47:53] 2026-02-09 05:47:24,104 | INFO     | update_server=False
[2026-02-08 21:47:53] 2026-02-09 05:47:24,104 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-08 21:47:53] 2026-02-09 05:47:24,124 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-08 21:47:53] 2026-02-09 05:47:24,124 | INFO     | aborting loop
[2026-02-08 21:47:53] 2026-02-09 05:47:24,466 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-08 21:47:53] 2026-02-09 05:47:24,622 | INFO     | all job control threads have been joined
[2026-02-08 21:47:53] 2026-02-09 05:47:24,699 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-08 21:47:53] 2026-02-09 05:47:24,884 | INFO     | all data control threads have been joined
[2026-02-08 21:47:53] 2026-02-09 05:47:24,987 | INFO     | all payload control threads have been joined
[2026-02-08 21:47:53] 2026-02-09 05:47:25,110 | INFO     | [job] retrieve thread has finished
[2026-02-08 21:47:53] 2026-02-09 05:47:25,130 | INFO     | [job] job monitor thread has finished
[2026-02-08 21:47:53] 2026-02-09 05:47:25,153 | INFO     | [job] validate thread has finished
[2026-02-08 21:47:53] 2026-02-09 05:47:25,247 | INFO     | [payload] failed_post thread has finished
[2026-02-08 21:47:53] 2026-02-09 05:47:25,398 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-08 21:47:53] 2026-02-09 05:47:25,472 | INFO     | [job] queue monitor thread has finished
[2026-02-08 21:47:53] 2026-02-09 05:47:25,508 | INFO     | [payload] execute_payloads thread has finished
[2026-02-08 21:47:53] 2026-02-09 05:47:25,515 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-08 21:47:53] 2026-02-09 05:47:25,628 | INFO     | [job] control thread has finished
[2026-02-08 21:47:53] 2026-02-09 05:47:25,890 | INFO     | [data] control thread has finished
[2026-02-08 21:47:53] 2026-02-09 05:47:26,001 | INFO     | [payload] control thread has finished
[2026-02-08 21:47:53] 2026-02-09 05:47:26,209 | INFO     | [payload] validate_pre thread has finished
[2026-02-08 21:47:53] 2026-02-09 05:47:26,303 | INFO     | [job] create_data_payload thread has finished
[2026-02-08 21:47:53] 2026-02-09 05:47:26,457 | INFO     | [data] copytool_in thread has finished
[2026-02-08 21:47:53] 2026-02-09 05:47:26,513 | INFO     | [payload] validate_post thread has finished
[2026-02-08 21:47:53] 2026-02-09 05:47:26,708 | INFO     | [data] copytool_out thread has finished
[2026-02-08 21:47:53] 2026-02-09 05:47:29,407 | INFO     | [data] queue_monitor thread has finished
[2026-02-08 21:47:53] 2026-02-09 05:47:46,016 | INFO     | [monitor] cgroup control has ended
[2026-02-08 21:47:53] 2026-02-09 05:47:46,915 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140208482387776)>', '<ExcThread(monitor, started 140207714195200)>']
[2026-02-08 21:47:53] 2026-02-09 05:47:51,932 | INFO     | PID=17321 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-08 21:47:53] 2026-02-09 05:47:51,932 | INFO     | .. there are 33 such processes running
[2026-02-08 21:47:53] 2026-02-09 05:47:51,933 | INFO     | found 0 job(s) in 20 queues
[2026-02-08 21:47:53] 2026-02-09 05:47:51,933 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-08 21:47:53] 2026-02-09 05:47:51,933 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-08 21:47:53] 2026-02-09 05:47:51,933 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-08 21:47:53] 2026-02-09 05:47:51,933 | INFO     | [monitor] control thread has ended
[2026-02-08 21:47:53] 2026-02-09 05:47:51,953 | INFO     | all workflow threads have been joined
[2026-02-08 21:47:53] 2026-02-09 05:47:51,953 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-08 21:47:53] 2026-02-09 05:47:51,953 | INFO     | traces error code: 0
[2026-02-08 21:47:53] 2026-02-09 05:47:51,954 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-08 21:47:53] 2026-02-09 05:47:52,405 [wrapper] ==== pilot stdout END ====
[2026-02-08 21:47:53] 2026-02-09 05:47:52,439 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-08 21:47:53] 2026-02-09 05:47:52,478 [wrapper] pilotpid: 17321
[2026-02-08 21:47:53] 2026-02-09 05:47:52,515 [wrapper] Pilot exit status: 0
[2026-02-08 21:47:53] 2026-02-09 05:47:52,625 [wrapper] pandaids: 7008495406
[2026-02-08 21:47:53] 2026-02-09 05:47:52,976 [wrapper] cleanup supervisor_pilot   17327 17322
[2026-02-08 21:47:53] 2026-02-09 05:47:52,979 [wrapper] Test setup, not cleaning
[2026-02-08 21:47:53] 2026-02-09 05:47:52,981 [wrapper] apfmon messages muted
[2026-02-08 21:47:53] 2026-02-09 05:47:52,983 [wrapper] ==== wrapper stdout END ====
[2026-02-08 21:47:53] 2026-02-09 05:47:52,984 [wrapper] ==== wrapper stderr END ====
[2026-02-08 21:47:53]  *** Error codes and diagnostics ***
[2026-02-08 21:47:53]     "exeErrorCode": 65,
[2026-02-08 21:47:53]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-02-08 21:47:53]     "pilotErrorCode": 1305,
[2026-02-08 21:47:53]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-02-08 21:47:53]  *** Listing of results directory ***
[2026-02-08 21:47:53] total 668784
[2026-02-08 21:47:53] -rw-r--r--. 1 boinc boinc    584627 Feb  8 17:56 pilot3.tar.gz
[2026-02-08 21:47:53] -rwx------. 1 boinc boinc     36322 Feb  8 17:57 runpilot2-wrapper.sh
[2026-02-08 21:47:53] -rw-r--r--. 1 boinc boinc      5111 Feb  8 17:59 queuedata.json
[2026-02-08 21:47:53] -rw-r--r--. 1 boinc boinc       100 Feb  8 21:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-08 21:47:53] -rwxr-xr-x. 1 boinc boinc      7986 Feb  8 21:39 run_atlas
[2026-02-08 21:47:53] -rw-r--r--. 1 boinc boinc       105 Feb  8 21:39 job.xml
[2026-02-08 21:47:53] -rw-r--r--. 2 boinc boinc 680646060 Feb  8 21:39 EVNT.48431094._000604.pool.root.1
[2026-02-08 21:47:53] -rw-r--r--. 1 boinc boinc      6443 Feb  8 21:39 init_data.xml
[2026-02-08 21:47:53] -rw-r--r--. 2 boinc boinc     15845 Feb  8 21:39 start_atlas.sh
[2026-02-08 21:47:53] drwxrwx--x. 2 boinc boinc      4096 Feb  8 21:39 shared
[2026-02-08 21:47:53] -rw-r--r--. 2 boinc boinc    597962 Feb  8 21:39 input.tar.gz
[2026-02-08 21:47:53] -rw-r--r--. 1 boinc boinc         0 Feb  8 21:39 boinc_lockfile
[2026-02-08 21:47:53] -rw-r--r--. 1 boinc boinc      2556 Feb  8 21:39 pandaJob.out
[2026-02-08 21:47:53] -rw-------. 1 boinc boinc   1009512 Feb  8 21:40 agis_schedconf.cvmfs.json
[2026-02-08 21:47:53] -rw-------. 1 boinc boinc   1513088 Feb  8 21:40 agis_ddmendpoints.agis.ALL.json
[2026-02-08 21:47:53] -rw-------. 1 boinc boinc       442 Feb  8 21:40 workernode_map.json
[2026-02-08 21:47:53] drwx------. 5 boinc boinc      4096 Feb  8 21:40 pilot3
[2026-02-08 21:47:53] -rw-r--r--. 1 boinc boinc       526 Feb  8 21:44 boinc_task_state.xml
[2026-02-08 21:47:53] -rw-------. 1 boinc boinc       982 Feb  8 21:45 memory_monitor_summary.json
[2026-02-08 21:47:53] -rw-------. 1 boinc boinc     23670 Feb  8 21:45 log.48431096._013393.job.log.tgz.1
[2026-02-08 21:47:53] -rw-------. 1 boinc boinc      7011 Feb  8 21:47 heartbeat.json
[2026-02-08 21:47:53] -rw-------. 1 boinc boinc        95 Feb  8 21:47 pilot_heartbeat.json
[2026-02-08 21:47:53] -rw-------. 1 boinc boinc      4817 Feb  8 21:47 pilotlog.txt
[2026-02-08 21:47:53] -rw-------. 1 boinc boinc    104986 Feb  8 21:47 log.48431096._013393.job.log.1
[2026-02-08 21:47:53] -rw-r--r--. 1 boinc boinc      8192 Feb  8 21:47 boinc_mmap_file
[2026-02-08 21:47:53] -rw-r--r--. 1 boinc boinc        23 Feb  8 21:47 wrapper_checkpoint.txt
[2026-02-08 21:47:53] -rw-------. 1 boinc boinc       188 Feb  8 21:47 output.list
[2026-02-08 21:47:53] -rw-r--r--. 1 boinc boinc       620 Feb  8 21:47 runtime_log
[2026-02-08 21:47:53] -rw-------. 1 boinc boinc    143360 Feb  8 21:47 result.tar.gz
[2026-02-08 21:47:53] -rw-------. 1 boinc boinc       643 Feb  8 21:47 yaHNDm3hV98nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmOreKDmMn6exm.diag
[2026-02-08 21:47:53] -rw-r--r--. 1 boinc boinc      8633 Feb  8 21:47 runtime_log.err
[2026-02-08 21:47:53] -rw-r--r--. 1 boinc boinc     21889 Feb  8 21:47 stderr.txt
[2026-02-08 21:47:53] No HITS result produced
[2026-02-08 21:47:53]  *** Contents of shared directory: ***
[2026-02-08 21:47:53] total 665440
[2026-02-08 21:47:53] -rw-r--r--. 2 boinc boinc 680646060 Feb  8 21:39 ATLAS.root_0
[2026-02-08 21:47:53] -rw-r--r--. 2 boinc boinc     15845 Feb  8 21:39 start_atlas.sh
[2026-02-08 21:47:53] -rw-r--r--. 2 boinc boinc    597962 Feb  8 21:39 input.tar.gz
[2026-02-08 21:47:53] -rw-------. 1 boinc boinc    143360 Feb  8 21:47 result.tar.gz
21:47:55 (13511): run_atlas exited; CPU time 30.028693
21:47:55 (13511): called boinc_finish(0)

</stderr_txt>
]]>

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