Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:21:24 (3477): wrapper (7.7.26015): starting
20:21:24 (3477): wrapper: running run_atlas (--nthreads 12)
[2026-02-08 20:21:24] Arguments: --nthreads 12
[2026-02-08 20:21:24] Threads: 12
[2026-02-08 20:21:24] Checking for CVMFS
[2026-02-08 20:21:24] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-08 20:21:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-08 20:21:24] Running cvmfs_config stat atlas.cern.ch
[2026-02-08 20:21:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-08 20:21:24] 2.11.2.0 6893 224928 99920 156039 1 49 11754418 20275201 1 130560 0 90641441 99.915 12969617 33836 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-08 20:21:24] CVMFS is ok
[2026-02-08 20:21:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-08 20:21:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-08 20:21:24] Further information can be found at the LHC@home message board.
[2026-02-08 20:21:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-08 20:21:24] Checking for apptainer binary...
[2026-02-08 20:21:24] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-08 20:21:24] Running /usr/bin/apptainer --version
[2026-02-08 20:21:24] apptainer version 1.3.2-1.el7
[2026-02-08 20:21:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-08 20:21:26] c-205-3.aglt2.org
[2026-02-08 20:21:26] apptainer works
[2026-02-08 20:21:26] Set ATHENA_PROC_NUMBER=12
[2026-02-08 20:21:26] Set ATHENA_CORE_NUMBER=12
[2026-02-08 20:21:26] Starting ATLAS job with PandaID=7004226717
[2026-02-08 20:21:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-08 21:59:01]  *** The last 200 lines of the pilot log: ***
[2026-02-08 21:59:01]  filesize=438942
[2026-02-08 21:59:01]  filetype=log
[2026-02-08 21:59:01]  guid=f69df713-1729-4a44-82f8-f9b879ae97cc
[2026-02-08 21:59:01]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-08 21:59:01]  is_altstaged=None
[2026-02-08 21:59:01]  is_tar=False
[2026-02-08 21:59:01]  lfn=log.48431113._006915.job.log.tgz.1
[2026-02-08 21:59:01]  mtime=0
[2026-02-08 21:59:01]  protocol_id=None
[2026-02-08 21:59:01]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-08 21:59:01]  replicas=None
[2026-02-08 21:59:01]  scope=mc23_13p6TeV
[2026-02-08 21:59:01]  status=None
[2026-02-08 21:59:01]  status_code=0
[2026-02-08 21:59:01]  storage_token=
[2026-02-08 21:59:01]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7004226717/log.48431113._006915.job.log.tgz.1
[2026-02-08 21:59:01]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0e/09/log.48431113._006915.job.log.tgz.1
[2026-02-08 21:59:01]  workdir=None
[2026-02-08 21:59:01] ]
[2026-02-08 21:59:01] 2026-02-09 02:58:19,248 | INFO     | transferring file log.48431113._006915.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7004226717/log.48431113._006915.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-02-08 21:59:01] 2026-02-09 02:58:19,248 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7004226717/log.48431113._006915.job.log.tgz.1 /tmp/boinchome/slots/0/log.48431113._006915.job
[2026-02-08 21:59:01] 2026-02-09 02:58:19,268 | INFO     | adding to output.list: log.48431113._006915.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0e/09/log.48431113._006915.job.log.tg
[2026-02-08 21:59:01] 2026-02-09 02:58:19,269 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-08 21:59:01] 2026-02-09 02:58:19,269 | INFO     | summary of transferred files:
[2026-02-08 21:59:01] 2026-02-09 02:58:19,270 | INFO     |  -- lfn=log.48431113._006915.job.log.tgz.1, status_code=0, status=transferred
[2026-02-08 21:59:01] 2026-02-09 02:58:19,270 | INFO     | stage-out finished correctly
[2026-02-08 21:59:01] 2026-02-09 02:58:19,979 | INFO     | monitor loop #439: job 0:7004226717 is in state 'finished'
[2026-02-08 21:59:01] 2026-02-09 02:58:19,980 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-08 21:59:01] 2026-02-09 02:58:20,013 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-08 21:59:01] 2026-02-09 02:58:20,558 | INFO     | job 7004226717 has state=finished
[2026-02-08 21:59:01] 2026-02-09 02:58:20,558 | INFO     | preparing for final server update for job 7004226717 in state='finished'
[2026-02-08 21:59:01] 2026-02-09 02:58:20,558 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7004226717/jobReport.json
[2026-02-08 21:59:01] 2026-02-09 02:58:20,561 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-02-08 21:59:01] 2026-02-09 02:58:20,561 | INFO     | this job has now completed (state=finished)
[2026-02-08 21:59:01] 2026-02-09 02:58:20,562 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-08 21:59:01] 2026-02-09 02:58:20,562 | INFO     | log transfer has been attempted: DONE
[2026-02-08 21:59:01] 2026-02-09 02:58:20,562 | INFO     | job 7004226717 has finished - writing final server update
[2026-02-08 21:59:01] 2026-02-09 02:58:20,562 | INFO     | total number of processed events: 400 (read)
[2026-02-08 21:59:01] 2026-02-09 02:58:20,564 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7004226717/memory_monitor_summary.json (trf name=prmon)
[2026-02-08 21:59:01] 2026-02-09 02:58:20,565 | INFO     | extracted standard info from prmon json
[2026-02-08 21:59:01] 2026-02-09 02:58:20,565 | INFO     | extracted standard memory fields from prmon json
[2026-02-08 21:59:01] 2026-02-09 02:58:20,565 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-08 21:59:01] 2026-02-09 02:58:20,565 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-08 21:59:01] 2026-02-09 02:58:20,565 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-08 21:59:01] 2026-02-09 02:58:20,567 | INFO     | fitting pss+swap vs Time
[2026-02-08 21:59:01] 2026-02-09 02:58:20,567 | INFO     | sum of square deviations: 211285822.0
[2026-02-08 21:59:01] 2026-02-09 02:58:20,568 | INFO     | sum of deviations: -12609157134.0
[2026-02-08 21:59:01] 2026-02-09 02:58:20,568 | INFO     | mean x: 1770603088.5
[2026-02-08 21:59:01] 2026-02-09 02:58:20,568 | INFO     | mean y: 2905982.0454545454
[2026-02-08 21:59:01] 2026-02-09 02:58:20,568 | INFO     | intersect: 105669307795.04646
[2026-02-08 21:59:01] 2026-02-09 02:58:20,568 | INFO     | chi2: 0.12464192796307892
[2026-02-08 21:59:01] 2026-02-09 02:58:20,568 | INFO     | current memory leak: -59.68 B/s (using 88 data points, chi2=0.12)
[2026-02-08 21:59:01] 2026-02-09 02:58:20,569 | INFO     | could have reported an average CPU frequency of 1706 MHz (7 samples)
[2026-02-08 21:59:01] 2026-02-09 02:58:20,569 | INFO     | ..............................
[2026-02-08 21:59:01] 2026-02-09 02:58:20,569 | INFO     | . Timing measurements:
[2026-02-08 21:59:01] 2026-02-09 02:58:20,569 | INFO     | . get job = 0 s
[2026-02-08 21:59:01] 2026-02-09 02:58:20,569 | INFO     | . initial setup = 7 s
[2026-02-08 21:59:01] 2026-02-09 02:58:20,569 | INFO     | . payload setup = 7 s
[2026-02-08 21:59:01] 2026-02-09 02:58:20,569 | INFO     | . stage-in = 0 s
[2026-02-08 21:59:01] 2026-02-09 02:58:20,569 | INFO     | . payload execution = 5769 s
[2026-02-08 21:59:01] 2026-02-09 02:58:20,570 | INFO     | . stage-out = 0 s
[2026-02-08 21:59:01] 2026-02-09 02:58:20,570 | INFO     | . log creation = 0 s
[2026-02-08 21:59:01] 2026-02-09 02:58:20,570 | INFO     | ..............................
[2026-02-08 21:59:01] 2026-02-09 02:58:20,646 | INFO     | 
[2026-02-08 21:59:01] 2026-02-09 02:58:20,646 | INFO     | job summary report
[2026-02-08 21:59:01] 2026-02-09 02:58:20,647 | INFO     | --------------------------------------------------
[2026-02-08 21:59:01] 2026-02-09 02:58:20,647 | INFO     | PanDA job id: 7004226717
[2026-02-08 21:59:01] 2026-02-09 02:58:20,647 | INFO     | task id: 48431113
[2026-02-08 21:59:01] 2026-02-09 02:58:20,647 | INFO     | errors: (none)
[2026-02-08 21:59:01] 2026-02-09 02:58:20,647 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-08 21:59:01] 2026-02-09 02:58:20,647 | INFO     | pilot state: finished 
[2026-02-08 21:59:01] 2026-02-09 02:58:20,648 | INFO     | transexitcode: 0
[2026-02-08 21:59:01] 2026-02-09 02:58:20,648 | INFO     | exeerrorcode: 0
[2026-02-08 21:59:01] 2026-02-09 02:58:20,648 | INFO     | exeerrordiag: 
[2026-02-08 21:59:01] 2026-02-09 02:58:20,648 | INFO     | exitcode: 0
[2026-02-08 21:59:01] 2026-02-09 02:58:20,648 | INFO     | exitmsg: OK
[2026-02-08 21:59:01] 2026-02-09 02:58:20,648 | INFO     | cpuconsumptiontime: 64173 s
[2026-02-08 21:59:01] 2026-02-09 02:58:20,648 | INFO     | nevents: 400
[2026-02-08 21:59:01] 2026-02-09 02:58:20,649 | INFO     | neventsw: 0
[2026-02-08 21:59:01] 2026-02-09 02:58:20,649 | INFO     | pid: 11624
[2026-02-08 21:59:01] 2026-02-09 02:58:20,649 | INFO     | pgrp: 11624
[2026-02-08 21:59:01] 2026-02-09 02:58:20,649 | INFO     | corecount: 12
[2026-02-08 21:59:01] 2026-02-09 02:58:20,649 | INFO     | event service: False
[2026-02-08 21:59:01] 2026-02-09 02:58:20,649 | INFO     | sizes: {0: 2283059, 1: 2283119, 11: 2283147, 5780: 2309816, 5781: 2318814, 5782: 2318870, 5783: 2319192}
[2026-02-08 21:59:01] 2026-02-09 02:58:20,650 | INFO     | --------------------------------------------------
[2026-02-08 21:59:01] 2026-02-09 02:58:20,650 | INFO     | 
[2026-02-08 21:59:01] 2026-02-09 02:58:20,650 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-08 21:59:01] 2026-02-09 02:58:20,677 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-08 21:59:01] 2026-02-09 02:58:20,677 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-08 21:59:01] 2026-02-09 02:58:20,677 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-08 21:59:01] 2026-02-09 02:58:20,678 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-08 21:59:01] 2026-02-09 02:58:20,678 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-08 21:59:01] 2026-02-09 02:58:20,678 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-08 21:59:01] 2026-02-09 02:58:20,678 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-08 21:59:01] 2026-02-09 02:58:20,678 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-08 21:59:01] 2026-02-09 02:58:20,678 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-08 21:59:01] 2026-02-09 02:58:20,679 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-08 21:59:01] 2026-02-09 02:58:20,679 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-08 21:59:01] 2026-02-09 02:58:20,679 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-08 21:59:01] 2026-02-09 02:58:20,679 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-08 21:59:01] 2026-02-09 02:58:20,679 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-08 21:59:01] 2026-02-09 02:58:20,679 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-08 21:59:01] 2026-02-09 02:58:20,680 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-08 21:59:01] 2026-02-09 02:58:20,680 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-08 21:59:01] 2026-02-09 02:58:20,680 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-08 21:59:01] 2026-02-09 02:58:20,680 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-08 21:59:01] 2026-02-09 02:58:20,680 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-08 21:59:01] 2026-02-09 02:58:20,680 | INFO     | job 7004226717 has completed (purged errors)
[2026-02-08 21:59:01] 2026-02-09 02:58:20,681 | INFO     | overall cleanup function is called
[2026-02-08 21:59:01] 2026-02-09 02:58:21,689 | INFO     | --- collectZombieJob: --- 10, [11624]
[2026-02-08 21:59:01] 2026-02-09 02:58:21,689 | INFO     | zombie collector waiting for pid 11624
[2026-02-08 21:59:01] 2026-02-09 02:58:21,689 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-08 21:59:01] 2026-02-09 02:58:21,689 | INFO     | collected zombie processes
[2026-02-08 21:59:01] 2026-02-09 02:58:21,690 | INFO     | will attempt to kill all subprocesses of pid=11624
[2026-02-08 21:59:01] 2026-02-09 02:58:21,777 | INFO     | process IDs to be killed: [11624] (in reverse order)
[2026-02-08 21:59:01] 2026-02-09 02:58:21,826 | WARNING  | found no corresponding commands to process id(s)
[2026-02-08 21:59:01] 2026-02-09 02:58:21,826 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-08 21:59:01] 2026-02-09 02:58:21,830 | INFO     | did not find any defunct processes belonging to 11624
[2026-02-08 21:59:01] 2026-02-09 02:58:21,833 | INFO     | did not find any defunct processes belonging to 11624
[2026-02-08 21:59:01] 2026-02-09 02:58:21,833 | INFO     | ready for new job
[2026-02-08 21:59:01] 2026-02-09 02:58:21,833 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-08 21:59:01] 2026-02-09 02:58:21,844 | INFO     | **************************************
[2026-02-08 21:59:01] 2026-02-09 02:58:21,845 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-08 21:59:01] 2026-02-09 02:58:21,845 | INFO     | **************************************
[2026-02-08 21:59:01] 2026-02-09 02:58:21,845 | INFO     | 
[2026-02-08 21:59:01] 2026-02-09 02:58:21,845 | INFO     | architecture information:
[2026-02-08 21:59:01] 2026-02-09 02:58:21,846 | INFO     | executing command: cat /etc/os-release
[2026-02-08 21:59:01] 2026-02-09 02:58:21,861 | INFO     | cat /etc/os-release:
[2026-02-08 21:59:01] NAME="CentOS Linux"
[2026-02-08 21:59:01] VERSION="7 (Core)"
[2026-02-08 21:59:01] ID="centos"
[2026-02-08 21:59:01] ID_LIKE="rhel fedora"
[2026-02-08 21:59:01] VERSION_ID="7"
[2026-02-08 21:59:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-08 21:59:01] ANSI_COLOR="0;31"
[2026-02-08 21:59:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-08 21:59:01] HOME_URL="https://www.centos.org/"
[2026-02-08 21:59:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-08 21:59:01] 
[2026-02-08 21:59:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-08 21:59:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-08 21:59:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-08 21:59:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-08 21:59:01] 
[2026-02-08 21:59:01] 2026-02-09 02:58:21,861 | INFO     | **************************************
[2026-02-08 21:59:01] 2026-02-09 02:58:22,364 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-08 21:59:01] 2026-02-09 02:58:22,380 | INFO     | sufficient remaining disk space (28550627328 B)
[2026-02-08 21:59:01] 2026-02-09 02:58:22,380 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-08 21:59:01] 2026-02-09 02:58:22,380 | INFO     | current server update state: UPDATING_FINAL
[2026-02-08 21:59:01] 2026-02-09 02:58:22,380 | INFO     | update_server=False
[2026-02-08 21:59:01] 2026-02-09 02:58:22,381 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-08 21:59:01] 2026-02-09 02:58:22,381 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-08 21:59:01] 2026-02-09 02:58:22,381 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-08 21:59:01] 2026-02-09 02:58:22,382 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-08 21:59:01] 2026-02-09 02:58:22,395 | INFO     | all payload control threads have been joined
[2026-02-08 21:59:01] 2026-02-09 02:58:22,483 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-08 21:59:01] 2026-02-09 02:58:22,483 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-08 21:59:01] 2026-02-09 02:58:22,484 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-08 21:59:01] 2026-02-09 02:58:22,484 | INFO     | will abort loop
[2026-02-08 21:59:01] 2026-02-09 02:58:22,605 | INFO     | all data control threads have been joined
[2026-02-08 21:59:01] 2026-02-09 02:58:23,346 | INFO     | job.realtimelogging is not enabled
[2026-02-08 21:59:01] 2026-02-09 02:58:23,386 | INFO     | [job] retrieve thread has finished
[2026-02-08 21:59:01] 2026-02-09 02:58:23,387 | INFO     | [job] queue monitor thread has finished
[2026-02-08 21:59:01] 2026-02-09 02:58:23,401 | INFO     | [payload] control thread has finished
[2026-02-08 21:59:01] 2026-02-09 02:58:23,417 | INFO     | [job] create_data_payload thread has finished
[2026-02-08 21:59:01] 2026-02-09 02:58:23,425 | INFO     | [payload] validate_pre thread has finished
[2026-02-08 21:59:01] 2026-02-09 02:58:23,425 | INFO     | all job control threads have been joined
[2026-02-08 21:59:01] 2026-02-09 02:58:23,489 | INFO     | [job] job monitor thread has finished
[2026-02-08 21:59:01] 2026-02-09 02:58:23,594 | INFO     | [payload] failed_post thread has finished
[2026-02-08 21:59:01] 2026-02-09 02:58:23,610 | INFO     | [data] control thread has finished
[2026-02-08 21:59:01] 2026-02-09 02:58:23,697 | INFO     | [payload] execute_payloads thread has finished
[2026-02-08 21:59:01] 2026-02-09 02:58:23,761 | INFO     | [data] copytool_in thread has finished
[2026-02-08 21:59:01] 2026-02-09 02:58:24,193 | INFO     | [payload] validate_post thread has finished
[2026-02-08 21:59:01] 2026-02-09 02:58:24,348 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-08 21:59:01] 2026-02-09 02:58:24,387 | INFO     | [data] copytool_out thread has finished
[2026-02-08 21:59:01] 2026-02-09 02:58:24,431 | INFO     | [job] control thread has finished
[2026-02-08 21:59:01] 2026-02-09 02:58:24,538 | INFO     | [job] validate thread has finished
[2026-02-08 21:59:01] 2026-02-09 02:58:26,387 | INFO     | [data] queue_monitor thread has finished
[2026-02-08 21:59:01] 2026-02-09 02:58:52,014 | INFO     | PID=7176 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-02-08 21:59:01] 2026-02-09 02:58:52,014 | INFO     | found 0 job(s) in 20 queues
[2026-02-08 21:59:01] 2026-02-09 02:58:52,014 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-08 21:59:01] 2026-02-09 02:58:52,014 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-08 21:59:01] 2026-02-09 02:58:55,276 | INFO     | [monitor] cgroup control has ended
[2026-02-08 21:59:01] 2026-02-09 02:58:55,747 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140307286714176)>', '<ExcThread(monitor, started 140306666198784)>']
[2026-02-08 21:59:01] 2026-02-09 02:58:56,035 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-08 21:59:01] 2026-02-09 02:58:56,035 | INFO     | [monitor] control thread has ended
[2026-02-08 21:59:01] 2026-02-09 02:59:00,773 | INFO     | all workflow threads have been joined
[2026-02-08 21:59:01] 2026-02-09 02:59:00,773 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-08 21:59:01] 2026-02-09 02:59:00,773 | INFO     | traces error code: 0
[2026-02-08 21:59:01] 2026-02-09 02:59:00,773 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-08 21:59:01] 2026-02-09 02:59:00,857 [wrapper] ==== pilot stdout END ====
[2026-02-08 21:59:01] 2026-02-09 02:59:00,861 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-08 21:59:01] 2026-02-09 02:59:00,865 [wrapper] pilotpid: 7176
[2026-02-08 21:59:01] 2026-02-09 02:59:00,868 [wrapper] Pilot exit status: 0
[2026-02-08 21:59:01] 2026-02-09 02:59:00,883 [wrapper] pandaids: 7004226717
[2026-02-08 21:59:01] 2026-02-09 02:59:00,922 [wrapper] cleanup supervisor_pilot  4895 7177
[2026-02-08 21:59:01] 2026-02-09 02:59:00,926 [wrapper] Test setup, not cleaning
[2026-02-08 21:59:01] 2026-02-09 02:59:00,930 [wrapper] apfmon messages muted
[2026-02-08 21:59:01] 2026-02-09 02:59:00,934 [wrapper] ==== wrapper stdout END ====
[2026-02-08 21:59:01] 2026-02-09 02:59:00,938 [wrapper] ==== wrapper stderr END ====
[2026-02-08 21:59:01]  *** Error codes and diagnostics ***
[2026-02-08 21:59:01]     "exeErrorCode": 0,
[2026-02-08 21:59:01]     "exeErrorDiag": "",
[2026-02-08 21:59:01]     "pilotErrorCode": 0,
[2026-02-08 21:59:01]     "pilotErrorDiag": "",
[2026-02-08 21:59:01]  *** Listing of results directory ***
[2026-02-08 21:59:01] total 889820
[2026-02-08 21:59:01] -rw-r--r-- 1 boincer umatlas      5111 Feb  8 02:07 queuedata.json
[2026-02-08 21:59:01] -rwx------ 1 boincer umatlas     36322 Feb  8 02:07 runpilot2-wrapper.sh
[2026-02-08 21:59:01] -rw-r--r-- 1 boincer umatlas    584627 Feb  8 02:08 pilot3.tar.gz
[2026-02-08 21:59:01] -rw-r--r-- 1 boincer umatlas       100 Feb  8 20:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-08 21:59:01] -rwxr-xr-x 1 boincer umatlas      7986 Feb  8 20:21 run_atlas
[2026-02-08 21:59:01] -rw-r--r-- 1 boincer umatlas       105 Feb  8 20:21 job.xml
[2026-02-08 21:59:01] -rw-r--r-- 2 boincer umatlas 644307992 Feb  8 20:21 EVNT.48431111._000136.pool.root.1
[2026-02-08 21:59:01] -rw-r--r-- 2 boincer umatlas     15845 Feb  8 20:21 start_atlas.sh
[2026-02-08 21:59:01] drwxrwx--x 2 boincer umatlas      4096 Feb  8 20:21 shared
[2026-02-08 21:59:01] -rw-r--r-- 2 boincer umatlas    597951 Feb  8 20:21 input.tar.gz
[2026-02-08 21:59:01] -rw-r--r-- 1 boincer umatlas         0 Feb  8 20:21 boinc_lockfile
[2026-02-08 21:59:01] -rw-r--r-- 1 boincer umatlas      2545 Feb  8 20:21 pandaJob.out
[2026-02-08 21:59:01] -rw------- 1 boincer umatlas        57 Feb  8 20:21 setup.sh.local
[2026-02-08 21:59:01] -rw------- 1 boincer umatlas   1009504 Feb  8 20:21 agis_schedconf.cvmfs.json
[2026-02-08 21:59:01] -rw------- 1 boincer umatlas   1513088 Feb  8 20:21 agis_ddmendpoints.agis.ALL.json
[2026-02-08 21:59:01] -rw------- 1 boincer umatlas       444 Feb  8 20:21 workernode_map.json
[2026-02-08 21:59:01] drwx------ 5 boincer umatlas      4096 Feb  8 20:21 pilot3
[2026-02-08 21:59:01] -rw-r--r-- 1 boincer umatlas      5952 Feb  8 21:56 init_data.xml
[2026-02-08 21:59:01] -rw------- 1 boincer umatlas 260379988 Feb  8 21:57 HITS.48431113._006915.pool.root.1
[2026-02-08 21:59:01] -rw------- 1 boincer umatlas        95 Feb  8 21:57 pilot_heartbeat.json
[2026-02-08 21:59:01] -rw-r--r-- 1 boincer umatlas       530 Feb  8 21:58 boinc_task_state.xml
[2026-02-08 21:59:01] -rw------- 1 boincer umatlas      1045 Feb  8 21:58 memory_monitor_summary.json
[2026-02-08 21:59:01] -rw------- 1 boincer umatlas    438942 Feb  8 21:58 log.48431113._006915.job.log.tgz.1
[2026-02-08 21:59:01] -rw------- 1 boincer umatlas      6418 Feb  8 21:58 heartbeat.json
[2026-02-08 21:59:01] -rw-r--r-- 1 boincer umatlas        27 Feb  8 21:58 wrapper_checkpoint.txt
[2026-02-08 21:59:01] -rw-r--r-- 1 boincer umatlas      8192 Feb  8 21:58 boinc_mmap_file
[2026-02-08 21:59:01] -rw------- 1 boincer umatlas      4999 Feb  8 21:59 pilotlog.txt
[2026-02-08 21:59:01] -rw------- 1 boincer umatlas    830233 Feb  8 21:59 log.48431113._006915.job.log.1
[2026-02-08 21:59:01] -rw------- 1 boincer umatlas       357 Feb  8 21:59 output.list
[2026-02-08 21:59:01] -rw-r--r-- 1 boincer umatlas       620 Feb  8 21:59 runtime_log
[2026-02-08 21:59:01] -rw------- 1 boincer umatlas   1290240 Feb  8 21:59 result.tar.gz
[2026-02-08 21:59:01] -rw-r--r-- 1 boincer umatlas      9338 Feb  8 21:59 runtime_log.err
[2026-02-08 21:59:01] -rw------- 1 boincer umatlas       658 Feb  8 21:59 A1nLDmd4D98n9Rq4apOajLDm4fhM0noT9bVooX4SDmIdcKDmsUQLxn.diag
[2026-02-08 21:59:01] -rw-r--r-- 1 boincer umatlas     21180 Feb  8 21:59 stderr.txt
[2026-02-08 21:59:01] HITS file was successfully produced:
[2026-02-08 21:59:01] -rw------- 1 boincer umatlas 260379988 Feb  8 21:57 shared/HITS.pool.root.1
[2026-02-08 21:59:01]  *** Contents of shared directory: ***
[2026-02-08 21:59:01] total 885356
[2026-02-08 21:59:01] -rw-r--r-- 2 boincer umatlas 644307992 Feb  8 20:21 ATLAS.root_0
[2026-02-08 21:59:01] -rw-r--r-- 2 boincer umatlas     15845 Feb  8 20:21 start_atlas.sh
[2026-02-08 21:59:01] -rw-r--r-- 2 boincer umatlas    597951 Feb  8 20:21 input.tar.gz
[2026-02-08 21:59:01] -rw------- 1 boincer umatlas 260379988 Feb  8 21:57 HITS.pool.root.1
[2026-02-08 21:59:01] -rw------- 1 boincer umatlas   1290240 Feb  8 21:59 result.tar.gz
21:59:02 (3477): run_atlas exited; CPU time 64157.360075
21:59:02 (3477): called boinc_finish(0)

</stderr_txt>
]]>

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