Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:30:53 (643343): wrapper (7.7.26015): starting
09:30:53 (643343): wrapper: running run_atlas (--nthreads 4)
[2026-02-13 09:30:53] Arguments: --nthreads 4
[2026-02-13 09:30:53] Threads: 4
[2026-02-13 09:30:53] Checking for CVMFS
[2026-02-13 09:30:53] No cvmfs_config command found, will try listing directly
[2026-02-13 09:30:53] CVMFS is ok
[2026-02-13 09:30:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-13 09:30:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-13 09:30:53] Further information can be found at the LHC@home message board.
[2026-02-13 09:30:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-13 09:30:53] Checking for apptainer binary...
[2026-02-13 09:30:53] which: no apptainer in ((null))
[2026-02-13 09:30:53] apptainer is not installed, using version from CVMFS
[2026-02-13 09:30:53] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-13 09:30:53] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot108/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2026-02-13 09:30:53] apptainer works
[2026-02-13 09:30:53] Set ATHENA_PROC_NUMBER=4
[2026-02-13 09:30:53] Set ATHENA_CORE_NUMBER=4
[2026-02-13 09:30:53] Starting ATLAS job with PandaID=7008209829
[2026-02-13 09:30:53] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot108/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-13 13:45:51]  *** The last 200 lines of the pilot log: ***
[2026-02-13 13:45:51] 2026-02-13 12:38:53,753 | INFO     | job 7008209829 has state=finished
[2026-02-13 13:45:51] 2026-02-13 12:38:53,754 | INFO     | preparing for final server update for job 7008209829 in state='finished'
[2026-02-13 13:45:51] 2026-02-13 12:38:54,458 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-02-13 13:45:51] 2026-02-13 12:38:54,458 | INFO     | reading metadata from: /scratch/boinc/var/slot108/slots/0/PanDA_Pilot-7008209829/jobReport.json
[2026-02-13 13:45:51] 2026-02-13 12:38:54,460 | INFO     | added worker_node to metadata from /scratch/boinc/var/slot108/slots/0/workernode_map.json
[2026-02-13 13:45:51] 2026-02-13 12:38:54,461 | INFO     | this job has now completed (state=finished)
[2026-02-13 13:45:51] 2026-02-13 12:38:54,461 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-13 13:45:51] 2026-02-13 12:38:54,461 | INFO     | log transfer has been attempted: DONE
[2026-02-13 13:45:51] 2026-02-13 12:38:54,461 | INFO     | job 7008209829 has finished - writing final server update
[2026-02-13 13:45:51] 2026-02-13 12:38:54,461 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_9364/.job.ad'
[2026-02-13 13:45:51] 2026-02-13 12:38:54,461 | INFO     | total number of processed events: 400 (read)
[2026-02-13 13:45:51] 2026-02-13 12:38:54,486 | INFO     | using path: /scratch/boinc/var/slot108/slots/0/PanDA_Pilot-7008209829/memory_monitor_summary.json (trf name=prmon)
[2026-02-13 13:45:51] 2026-02-13 12:38:54,486 | INFO     | extracted standard info from prmon json
[2026-02-13 13:45:51] 2026-02-13 12:38:54,486 | INFO     | extracted standard memory fields from prmon json
[2026-02-13 13:45:51] 2026-02-13 12:38:54,487 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-13 13:45:51] 2026-02-13 12:38:54,487 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-13 13:45:51] 2026-02-13 12:38:54,487 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-13 13:45:51] 2026-02-13 12:38:54,491 | INFO     | fitting pss+swap vs Time
[2026-02-13 13:45:51] 2026-02-13 12:38:54,492 | INFO     | sum of square deviations: 4449281562.0
[2026-02-13 13:45:51] 2026-02-13 12:38:54,494 | INFO     | sum of deviations: 11188267786.0
[2026-02-13 13:45:51] 2026-02-13 12:38:54,494 | INFO     | mean x: 1770978885.0
[2026-02-13 13:45:51] 2026-02-13 12:38:54,494 | INFO     | mean y: 2375145.4567901236
[2026-02-13 13:45:51] 2026-02-13 12:38:54,494 | INFO     | intersect: -4450969901.968126
[2026-02-13 13:45:51] 2026-02-13 12:38:54,494 | INFO     | chi2: 1.3465261419627856
[2026-02-13 13:45:51] 2026-02-13 12:38:54,495 | INFO     | sum of square deviations: 4180243959.5
[2026-02-13 13:45:51] 2026-02-13 12:38:54,497 | INFO     | sum of deviations: 10971431147.000002
[2026-02-13 13:45:51] 2026-02-13 12:38:54,497 | INFO     | mean x: 1770978732.5
[2026-02-13 13:45:51] 2026-02-13 12:38:54,497 | INFO     | mean y: 2375022.529411765
[2026-02-13 13:45:51] 2026-02-13 12:38:54,497 | INFO     | intersect: -4645720020.408976
[2026-02-13 13:45:51] 2026-02-13 12:38:54,497 | INFO     | chi2: 1.346965604890733
[2026-02-13 13:45:51] 2026-02-13 12:38:54,497 | INFO     | current chi2=1.346965604890733 (change=-0.032636791388750676 %)
[2026-02-13 13:45:51] 2026-02-13 12:38:54,497 | INFO     | right removable region: 237
[2026-02-13 13:45:51] 2026-02-13 12:38:54,498 | INFO     | sum of square deviations: 4180243959.5
[2026-02-13 13:45:51] 2026-02-13 12:38:54,500 | INFO     | sum of deviations: -19400490935.000004
[2026-02-13 13:45:51] 2026-02-13 12:38:54,500 | INFO     | mean x: 1770979037.5
[2026-02-13 13:45:51] 2026-02-13 12:38:54,500 | INFO     | mean y: 2392294.4033613447
[2026-02-13 13:45:51] 2026-02-13 12:38:54,500 | INFO     | intersect: 8221496991.633361
[2026-02-13 13:45:51] 2026-02-13 12:38:54,500 | INFO     | chi2: 0.05142710940916328
[2026-02-13 13:45:51] 2026-02-13 12:38:54,500 | INFO     | current chi2=0.05142710940916328 (change=96.18075670375032 %)
[2026-02-13 13:45:51] 2026-02-13 12:38:54,501 | INFO     | sum of square deviations: 3922276332.0
[2026-02-13 13:45:51] 2026-02-13 12:38:54,502 | INFO     | sum of deviations: -19849978462.999996
[2026-02-13 13:45:51] 2026-02-13 12:38:54,503 | INFO     | mean x: 1770979190.0
[2026-02-13 13:45:51] 2026-02-13 12:38:54,503 | INFO     | mean y: 2392538.909871245
[2026-02-13 13:45:51] 2026-02-13 12:38:54,503 | INFO     | intersect: 8965019290.400358
[2026-02-13 13:45:51] 2026-02-13 12:38:54,503 | INFO     | chi2: 0.0430414198322406
[2026-02-13 13:45:51] 2026-02-13 12:38:54,503 | INFO     | current chi2=0.0430414198322406 (change=16.30597105935827 %)
[2026-02-13 13:45:51] 2026-02-13 12:38:54,503 | INFO     | left removable region: 20
[2026-02-13 13:45:51] 2026-02-13 12:38:54,504 | INFO     | sum of square deviations: 3168461268.0
[2026-02-13 13:45:51] 2026-02-13 12:38:54,505 | INFO     | sum of deviations: -12894265705.0
[2026-02-13 13:45:51] 2026-02-13 12:38:54,505 | INFO     | mean x: 1770979312.0
[2026-02-13 13:45:51] 2026-02-13 12:38:54,506 | INFO     | mean y: 2388570.9078341015
[2026-02-13 13:45:51] 2026-02-13 12:38:54,506 | INFO     | intersect: 7209507697.663116
[2026-02-13 13:45:51] 2026-02-13 12:38:54,506 | INFO     | chi2: 0.033883303299746974
[2026-02-13 13:45:51] 2026-02-13 12:38:54,506 | INFO     | current memory leak: -4.07 B/s (using 217 data points, chi2=0.03)
[2026-02-13 13:45:51] 2026-02-13 12:38:54,506 | INFO     | could have reported an average CPU frequency of 2685 MHz (12 samples)
[2026-02-13 13:45:51] 2026-02-13 12:38:54,507 | INFO     | ..............................
[2026-02-13 13:45:51] 2026-02-13 12:38:54,507 | INFO     | . Timing measurements:
[2026-02-13 13:45:51] 2026-02-13 12:38:54,507 | INFO     | . get job = 0 s
[2026-02-13 13:45:51] 2026-02-13 12:38:54,507 | INFO     | . initial setup = 8 s
[2026-02-13 13:45:51] 2026-02-13 12:38:54,507 | INFO     | . payload setup = 9 s
[2026-02-13 13:45:51] 2026-02-13 12:38:54,507 | INFO     | . stage-in = 0 s
[2026-02-13 13:45:51] 2026-02-13 12:38:54,507 | INFO     | . payload execution = 14829 s
[2026-02-13 13:45:51] 2026-02-13 12:38:54,507 | INFO     | . stage-out = 1 s
[2026-02-13 13:45:51] 2026-02-13 12:38:54,507 | INFO     | . log creation = 0 s
[2026-02-13 13:45:51] 2026-02-13 12:38:54,507 | INFO     | ..............................
[2026-02-13 13:45:51] 2026-02-13 12:38:54,880 | INFO     | 
[2026-02-13 13:45:51] 2026-02-13 12:38:54,880 | INFO     | job summary report
[2026-02-13 13:45:51] 2026-02-13 12:38:54,880 | INFO     | --------------------------------------------------
[2026-02-13 13:45:51] 2026-02-13 12:38:54,880 | INFO     | PanDA job id: 7008209829
[2026-02-13 13:45:51] 2026-02-13 12:38:54,881 | INFO     | task id: 48431096
[2026-02-13 13:45:51] 2026-02-13 12:38:54,881 | INFO     | errors: (none)
[2026-02-13 13:45:51] 2026-02-13 12:38:54,881 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-13 13:45:51] 2026-02-13 12:38:54,881 | INFO     | pilot state: finished 
[2026-02-13 13:45:51] 2026-02-13 12:38:54,881 | INFO     | transexitcode: 0
[2026-02-13 13:45:51] 2026-02-13 12:38:54,881 | INFO     | exeerrorcode: 0
[2026-02-13 13:45:51] 2026-02-13 12:38:54,881 | INFO     | exeerrordiag: 
[2026-02-13 13:45:51] 2026-02-13 12:38:54,881 | INFO     | exitcode: 0
[2026-02-13 13:45:51] 2026-02-13 12:38:54,881 | INFO     | exitmsg: OK
[2026-02-13 13:45:51] 2026-02-13 12:38:54,881 | INFO     | cpuconsumptiontime: 56873 s
[2026-02-13 13:45:51] 2026-02-13 12:38:54,881 | INFO     | nevents: 400
[2026-02-13 13:45:51] 2026-02-13 12:38:54,882 | INFO     | neventsw: 0
[2026-02-13 13:45:51] 2026-02-13 12:38:54,882 | INFO     | pid: 652512
[2026-02-13 13:45:51] 2026-02-13 12:38:54,882 | INFO     | pgrp: 652512
[2026-02-13 13:45:51] 2026-02-13 12:38:54,882 | INFO     | corecount: 4
[2026-02-13 13:45:51] 2026-02-13 12:38:54,882 | INFO     | event service: False
[2026-02-13 13:45:51] 2026-02-13 12:38:54,882 | INFO     | sizes: {0: 2281909, 1: 2282199, 11: 2282199, 14842: 2313649, 14843: 2313648, 14845: 2322910, 14847: 2323048}
[2026-02-13 13:45:51] 2026-02-13 12:38:54,882 | INFO     | --------------------------------------------------
[2026-02-13 13:45:51] 2026-02-13 12:38:54,882 | INFO     | 
[2026-02-13 13:45:51] 2026-02-13 12:38:54,882 | INFO     | executing command: ls -lF /scratch/boinc/var/slot108/slots/0
[2026-02-13 13:45:51] 2026-02-13 12:38:54,912 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-13 13:45:51] 2026-02-13 12:38:54,912 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-13 13:45:51] 2026-02-13 12:38:54,912 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-13 13:45:51] 2026-02-13 12:38:54,913 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-13 13:45:51] 2026-02-13 12:38:54,913 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-13 13:45:51] 2026-02-13 12:38:54,913 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-13 13:45:51] 2026-02-13 12:38:54,913 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-13 13:45:51] 2026-02-13 12:38:54,913 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-13 13:45:51] 2026-02-13 12:38:54,913 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-13 13:45:51] 2026-02-13 12:38:54,913 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-13 13:45:51] 2026-02-13 12:38:54,913 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-13 13:45:51] 2026-02-13 12:38:54,913 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-13 13:45:51] 2026-02-13 12:38:54,913 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-13 13:45:51] 2026-02-13 12:38:54,913 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-13 13:45:51] 2026-02-13 12:38:54,914 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-13 13:45:51] 2026-02-13 12:38:54,914 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-13 13:45:51] 2026-02-13 12:38:54,914 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-13 13:45:51] 2026-02-13 12:38:54,914 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-13 13:45:51] 2026-02-13 12:38:54,914 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-13 13:45:51] 2026-02-13 12:38:54,914 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-13 13:45:51] 2026-02-13 12:38:54,914 | INFO     | job 7008209829 has completed (purged errors)
[2026-02-13 13:45:51] 2026-02-13 12:38:54,914 | INFO     | overall cleanup function is called
[2026-02-13 13:45:51] 2026-02-13 12:38:55,924 | INFO     | --- collectZombieJob: --- 10, [652512]
[2026-02-13 13:45:51] 2026-02-13 12:38:55,924 | INFO     | zombie collector waiting for pid 652512
[2026-02-13 13:45:51] 2026-02-13 12:38:55,924 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-13 13:45:51] 2026-02-13 12:38:55,924 | INFO     | collected zombie processes
[2026-02-13 13:45:51] 2026-02-13 12:38:55,924 | INFO     | will attempt to kill all subprocesses of pid=652512
[2026-02-13 13:45:51] 2026-02-13 12:38:56,823 | INFO     | process IDs to be killed: [652512] (in reverse order)
[2026-02-13 13:45:51] 2026-02-13 12:38:57,153 | WARNING  | found no corresponding commands to process id(s)
[2026-02-13 13:45:51] 2026-02-13 12:38:57,154 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-13 13:45:51] 2026-02-13 12:38:57,190 | INFO     | did not find any defunct processes belonging to 652512
[2026-02-13 13:45:51] 2026-02-13 12:38:57,227 | INFO     | did not find any defunct processes belonging to 652512
[2026-02-13 13:45:51] 2026-02-13 12:38:57,227 | INFO     | ready for new job
[2026-02-13 13:45:51] 2026-02-13 12:38:57,228 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-13 13:45:51] 2026-02-13 12:38:57,230 | INFO     | **************************************
[2026-02-13 13:45:51] 2026-02-13 12:38:57,230 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-13 13:45:51] 2026-02-13 12:38:57,230 | INFO     | **************************************
[2026-02-13 13:45:51] 2026-02-13 12:38:57,230 | INFO     | 
[2026-02-13 13:45:51] 2026-02-13 12:38:57,239 | INFO     | architecture information:
[2026-02-13 13:45:51] 2026-02-13 12:38:57,239 | INFO     | executing command: cat /etc/os-release
[2026-02-13 13:45:51] 2026-02-13 12:38:57,265 | INFO     | cat /etc/os-release:
[2026-02-13 13:45:51] NAME="CentOS Linux"
[2026-02-13 13:45:51] VERSION="7 (Core)"
[2026-02-13 13:45:51] ID="centos"
[2026-02-13 13:45:51] ID_LIKE="rhel fedora"
[2026-02-13 13:45:51] VERSION_ID="7"
[2026-02-13 13:45:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-13 13:45:51] ANSI_COLOR="0;31"
[2026-02-13 13:45:51] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-13 13:45:51] HOME_URL="https://www.centos.org/"
[2026-02-13 13:45:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-13 13:45:51] 
[2026-02-13 13:45:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-13 13:45:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-13 13:45:51] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-13 13:45:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-13 13:45:51] 
[2026-02-13 13:45:51] 2026-02-13 12:38:57,266 | INFO     | **************************************
[2026-02-13 13:45:51] 2026-02-13 12:38:57,768 | INFO     | executing command: df -mP /scratch/boinc/var/slot108/slots/0
[2026-02-13 13:45:51] 2026-02-13 12:38:57,796 | INFO     | sufficient remaining disk space (3256345427968 B)
[2026-02-13 13:45:51] 2026-02-13 12:38:57,797 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-13 13:45:51] 2026-02-13 12:38:57,797 | INFO     | current server update state: UPDATING_FINAL
[2026-02-13 13:45:51] 2026-02-13 12:38:57,797 | INFO     | update_server=False
[2026-02-13 13:45:51] 2026-02-13 12:38:57,797 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-13 13:45:51] 2026-02-13 12:38:57,797 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-13 13:45:51] 2026-02-13 12:38:57,798 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-13 13:45:51] 2026-02-13 12:38:57,798 | INFO     | aborting loop
[2026-02-13 13:45:51] 2026-02-13 12:38:58,154 | INFO     | all data control threads have been joined
[2026-02-13 13:45:51] 2026-02-13 12:38:58,574 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-13 13:45:51] 2026-02-13 12:38:58,802 | INFO     | [job] retrieve thread has finished
[2026-02-13 13:45:51] 2026-02-13 12:38:58,804 | INFO     | [job] job monitor thread has finished
[2026-02-13 13:45:51] 2026-02-13 12:38:58,813 | INFO     | [job] validate thread has finished
[2026-02-13 13:45:51] 2026-02-13 12:38:58,955 | INFO     | all payload control threads have been joined
[2026-02-13 13:45:51] 2026-02-13 12:38:59,033 | INFO     | [payload] validate_pre thread has finished
[2026-02-13 13:45:51] 2026-02-13 12:38:59,054 | INFO     | [job] create_data_payload thread has finished
[2026-02-13 13:45:51] 2026-02-13 12:38:59,160 | INFO     | [data] control thread has finished
[2026-02-13 13:45:51] 2026-02-13 12:38:59,216 | INFO     | [payload] validate_post thread has finished
[2026-02-13 13:45:51] 2026-02-13 12:38:59,439 | INFO     | [payload] failed_post thread has finished
[2026-02-13 13:45:51] 2026-02-13 12:38:59,467 | INFO     | all job control threads have been joined
[2026-02-13 13:45:51] 2026-02-13 12:38:59,588 | INFO     | [data] copytool_in thread has finished
[2026-02-13 13:45:51] 2026-02-13 12:38:59,593 | INFO     | [payload] execute_payloads thread has finished
[2026-02-13 13:45:51] 2026-02-13 12:38:59,601 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-13 13:45:51] 2026-02-13 12:38:59,610 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-13 13:45:51] 2026-02-13 12:38:59,803 | INFO     | [data] copytool_out thread has finished
[2026-02-13 13:45:51] 2026-02-13 12:38:59,960 | INFO     | [payload] control thread has finished
[2026-02-13 13:45:51] 2026-02-13 12:39:00,473 | INFO     | [job] control thread has finished
[2026-02-13 13:45:51] 2026-02-13 12:39:00,615 | INFO     | [job] queue monitor thread has finished
[2026-02-13 13:45:51] 2026-02-13 12:39:02,581 | INFO     | [data] queue_monitor thread has finished
[2026-02-13 13:45:51] 2026-02-13 12:39:27,145 | INFO     | PID=647367 has CPU usage=12.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-13 13:45:51] 2026-02-13 12:39:27,145 | INFO     | .. there are 8 such processes running
[2026-02-13 13:45:51] 2026-02-13 12:39:27,146 | INFO     | found 0 job(s) in 20 queues
[2026-02-13 13:45:51] 2026-02-13 12:39:27,146 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-13 13:45:51] 2026-02-13 12:39:27,147 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-13 13:45:51] 2026-02-13 12:39:39,768 | INFO     | [monitor] cgroup control has ended
[2026-02-13 13:45:51] 2026-02-13 12:39:40,411 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23346775967552)>', '<ExcThread(monitor, started 23346537576192)>']
[2026-02-13 13:45:51] 2026-02-13 12:39:41,216 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-13 13:45:51] 2026-02-13 12:39:41,216 | INFO     | [monitor] control thread has ended
[2026-02-13 13:45:51] 2026-02-13 12:39:45,436 | INFO     | all workflow threads have been joined
[2026-02-13 13:45:51] 2026-02-13 12:39:45,436 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-13 13:45:51] 2026-02-13 12:39:45,436 | INFO     | traces error code: 0
[2026-02-13 13:45:51] 2026-02-13 12:39:45,437 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-13 13:45:51] 2026-02-13 12:39:45,582 [wrapper] ==== pilot stdout END ====
[2026-02-13 13:45:51] 2026-02-13 12:39:45,586 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-13 13:45:51] 2026-02-13 12:39:45,590 [wrapper] pilotpid: 647367
[2026-02-13 13:45:51] 2026-02-13 12:39:45,594 [wrapper] Pilot exit status: 0
[2026-02-13 13:45:51] 2026-02-13 12:39:45,610 [wrapper] pandaids: 7008209829
[2026-02-13 13:45:51] 2026-02-13 12:39:45,837 [wrapper] cleanup supervisor_pilot  954623 647368
[2026-02-13 13:45:51] 2026-02-13 12:39:45,841 [wrapper] Test setup, not cleaning
[2026-02-13 13:45:51] 2026-02-13 12:39:45,848 [wrapper] apfmon messages muted
[2026-02-13 13:45:51] 2026-02-13 12:39:45,851 [wrapper] ==== wrapper stdout END ====
[2026-02-13 13:45:51] 2026-02-13 12:39:45,856 [wrapper] ==== wrapper stderr END ====
[2026-02-13 13:45:51]  *** Error codes and diagnostics ***
[2026-02-13 13:45:51]     "exeErrorCode": 0,
[2026-02-13 13:45:51]     "exeErrorDiag": "",
[2026-02-13 13:45:51]     "pilotErrorCode": 0,
[2026-02-13 13:45:51]     "pilotErrorDiag": "",
[2026-02-13 13:45:51]  *** Listing of results directory ***
[2026-02-13 13:45:51] total 956404
[2026-02-13 13:45:51] -rw-r--r-- 1 boinc boinc    584627 Feb  8 20:50 pilot3.tar.gz
[2026-02-13 13:45:51] -rwx------ 1 boinc boinc     36322 Feb  8 20:52 runpilot2-wrapper.sh
[2026-02-13 13:45:51] -rw-r--r-- 1 boinc boinc      5111 Feb  8 20:54 queuedata.json
[2026-02-13 13:45:51] -rw-r--r-- 1 boinc boinc       100 Feb 13 08:48 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-13 13:45:51] -rwxr-xr-x 1 boinc boinc      7986 Feb 13 08:48 run_atlas
[2026-02-13 13:45:51] -rw-r--r-- 1 boinc boinc       105 Feb 13 08:48 job.xml
[2026-02-13 13:45:51] -rw-r--r-- 2 boinc boinc 684516368 Feb 13 09:30 EVNT.48431094._000340.pool.root.1
[2026-02-13 13:45:51] -rw-r--r-- 1 boinc boinc      6698 Feb 13 09:30 init_data.xml
[2026-02-13 13:45:51] -rw-r--r-- 2 boinc boinc     15845 Feb 13 09:30 start_atlas.sh
[2026-02-13 13:45:51] drwxrwx--x 2 boinc boinc      4096 Feb 13 09:30 shared
[2026-02-13 13:45:51] -rw-r--r-- 2 boinc boinc    597966 Feb 13 09:30 input.tar.gz
[2026-02-13 13:45:51] -rw-r--r-- 1 boinc boinc         0 Feb 13 09:30 boinc_lockfile
[2026-02-13 13:45:51] -rw-r--r-- 1 boinc boinc      2553 Feb 13 09:30 pandaJob.out
[2026-02-13 13:45:51] -rw------- 1 boinc boinc   1000262 Feb 13 09:31 agis_schedconf.cvmfs.json
[2026-02-13 13:45:51] -rw------- 1 boinc boinc       443 Feb 13 09:31 workernode_map.json
[2026-02-13 13:45:51] drwx------ 5 boinc boinc      4096 Feb 13 09:31 pilot3
[2026-02-13 13:45:51] -rw------- 1 boinc boinc 286004947 Feb 13 13:38 HITS.48431096._010798.pool.root.1
[2026-02-13 13:45:51] -rw-r--r-- 1 boinc boinc       529 Feb 13 13:38 boinc_task_state.xml
[2026-02-13 13:45:51] -rw------- 1 boinc boinc      1031 Feb 13 13:38 memory_monitor_summary.json
[2026-02-13 13:45:51] -rw------- 1 boinc boinc   1512955 Feb 13 13:38 agis_ddmendpoints.agis.ALL.json
[2026-02-13 13:45:51] -rw------- 1 boinc boinc    405652 Feb 13 13:38 log.48431096._010798.job.log.tgz.1
[2026-02-13 13:45:51] -rw------- 1 boinc boinc      6352 Feb 13 13:38 heartbeat.json
[2026-02-13 13:45:51] -rw------- 1 boinc boinc        95 Feb 13 13:39 pilot_heartbeat.json
[2026-02-13 13:45:51] -rw------- 1 boinc boinc      4831 Feb 13 13:39 pilotlog.txt
[2026-02-13 13:45:51] -rw------- 1 boinc boinc   2040984 Feb 13 13:39 log.48431096._010798.job.log.1
[2026-02-13 13:45:51] -rw------- 1 boinc boinc       357 Feb 13 13:39 output.list
[2026-02-13 13:45:51] -rw-r--r-- 1 boinc boinc       620 Feb 13 13:39 runtime_log
[2026-02-13 13:45:51] -rw------- 1 boinc boinc   2467840 Feb 13 13:39 result.tar.gz
[2026-02-13 13:45:51] -rw------- 1 boinc boinc       667 Feb 13 13:39 t1gKDmR0P98nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm9JeKDmF6dzUm.diag
[2026-02-13 13:45:51] -rw-r--r-- 1 boinc boinc      9222 Feb 13 13:39 runtime_log.err
[2026-02-13 13:45:51] -rw-r--r-- 1 boinc boinc        27 Feb 13 13:45 wrapper_checkpoint.txt
[2026-02-13 13:45:51] -rw-r--r-- 1 boinc boinc      8192 Feb 13 13:45 boinc_mmap_file
[2026-02-13 13:45:51] -rw-r--r-- 1 boinc boinc     21129 Feb 13 13:45 stderr.txt
[2026-02-13 13:45:51] HITS file was successfully produced:
[2026-02-13 13:45:51] -rw------- 1 boinc boinc 286004947 Feb 13 13:38 shared/HITS.pool.root.1
[2026-02-13 13:45:51]  *** Contents of shared directory: ***
[2026-02-13 13:45:51] total 950800
[2026-02-13 13:45:51] -rw-r--r-- 2 boinc boinc 684516368 Feb 13 09:30 ATLAS.root_0
[2026-02-13 13:45:51] -rw-r--r-- 2 boinc boinc     15845 Feb 13 09:30 start_atlas.sh
[2026-02-13 13:45:51] -rw-r--r-- 2 boinc boinc    597966 Feb 13 09:30 input.tar.gz
[2026-02-13 13:45:51] -rw------- 1 boinc boinc 286004947 Feb 13 13:38 HITS.pool.root.1
[2026-02-13 13:45:51] -rw------- 1 boinc boinc   2467840 Feb 13 13:39 result.tar.gz
13:45:52 (643343): run_atlas exited; CPU time 57987.279205
13:45:52 (643343): called boinc_finish(0)

</stderr_txt>
]]>

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