Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
12:39:03 (307519): wrapper (7.7.26015): starting
12:39:03 (307519): wrapper: running run_atlas (--nthreads 4)
[2026-02-09 12:39:03] Arguments: --nthreads 4
[2026-02-09 12:39:03] Threads: 4
[2026-02-09 12:39:03] Checking for CVMFS
[2026-02-09 12:39:03] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-09 12:39:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-09 12:39:03] Running cvmfs_config stat atlas.cern.ch
[2026-02-09 12:39:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-09 12:39:03] 2.9.2.0 3731233 4575 97008 156054 2 50 24880443 36864000 0 130560 0 2158442 99.985 165980 13410 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-09 12:39:03] CVMFS is ok
[2026-02-09 12:39:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-09 12:39:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-09 12:39:03] Further information can be found at the LHC@home message board.
[2026-02-09 12:39:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-09 12:39:03] Checking for apptainer binary...
[2026-02-09 12:39:03] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-09 12:39:03] Running /usr/bin/apptainer --version
[2026-02-09 12:39:03] apptainer version 1.4.1-1.1
[2026-02-09 12:39:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-09 12:39:04] thA332a
[2026-02-09 12:39:04] apptainer works
[2026-02-09 12:39:04] Set ATHENA_PROC_NUMBER=4
[2026-02-09 12:39:04] Set ATHENA_CORE_NUMBER=4
[2026-02-09 12:39:04] Starting ATLAS job with PandaID=7008213758
[2026-02-09 12:39:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-09 14:23:30]  *** The last 200 lines of the pilot log: ***
[2026-02-09 14:23:30] 2026-02-09 13:22:33,225 | INFO     | aborting loop
[2026-02-09 14:23:30] 2026-02-09 13:22:33,225 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-09 14:23:30] 2026-02-09 13:22:33,285 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-09 14:23:30] 2026-02-09 13:22:33,843 | INFO     | all data control threads have been joined
[2026-02-09 14:23:30] 2026-02-09 13:22:34,202 | INFO     | all job control threads have been joined
[2026-02-09 14:23:30] 2026-02-09 13:22:34,230 | INFO     | [job] job monitor thread has finished
[2026-02-09 14:23:30] 2026-02-09 13:22:34,230 | INFO     | [job] retrieve thread has finished
[2026-02-09 14:23:30] 2026-02-09 13:22:34,230 | INFO     | [job] queue monitor thread has finished
[2026-02-09 14:23:30] 2026-02-09 13:22:34,306 | INFO     | all payload control threads have been joined
[2026-02-09 14:23:30] 2026-02-09 13:22:34,721 | INFO     | [payload] execute_payloads thread has finished
[2026-02-09 14:23:30] 2026-02-09 13:22:34,849 | INFO     | [data] control thread has finished
[2026-02-09 14:23:30] 2026-02-09 13:22:34,982 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-09 14:23:30] 2026-02-09 13:22:35,056 | INFO     | [payload] validate_post thread has finished
[2026-02-09 14:23:30] 2026-02-09 13:22:35,120 | INFO     | [job] validate thread has finished
[2026-02-09 14:23:30] 2026-02-09 13:22:35,184 | INFO     | [job] create_data_payload thread has finished
[2026-02-09 14:23:30] 2026-02-09 13:22:35,208 | INFO     | [job] control thread has finished
[2026-02-09 14:23:30] 2026-02-09 13:22:35,276 | INFO     | [payload] validate_pre thread has finished
[2026-02-09 14:23:30] 2026-02-09 13:22:35,291 | INFO     | [data] copytool_out thread has finished
[2026-02-09 14:23:30] 2026-02-09 13:22:35,312 | INFO     | [payload] control thread has finished
[2026-02-09 14:23:30] 2026-02-09 13:22:35,423 | INFO     | [data] copytool_in thread has finished
[2026-02-09 14:23:30] 2026-02-09 13:22:35,530 | INFO     | [payload] failed_post thread has finished
[2026-02-09 14:23:30] 2026-02-09 13:22:36,649 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-09 14:23:30] 2026-02-09 13:22:40,656 | INFO     | [data] queue_monitor thread has finished
[2026-02-09 14:23:30] 2026-02-09 13:23:03,630 | INFO     | PID=311617 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-09 14:23:30] 2026-02-09 13:23:03,630 | INFO     | found 0 job(s) in 20 queues
[2026-02-09 14:23:30] 2026-02-09 13:23:03,630 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-09 14:23:30] 2026-02-09 13:23:03,631 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-09 14:23:30] 2026-02-09 13:23:24,226 | INFO     | [monitor] cgroup control has ended
[2026-02-09 14:23:30] 2026-02-09 13:23:25,439 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139629894420288)>', '<ExcThread(monitor, started 139629151893248)>']
[2026-02-09 14:23:30] 2026-02-09 13:23:25,745 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-09 14:23:30] 2026-02-09 13:23:25,745 | INFO     | [monitor] control thread has ended
[2026-02-09 14:23:30] 2026-02-09 13:23:30,465 | INFO     | all workflow threads have been joined
[2026-02-09 14:23:30] 2026-02-09 13:23:30,465 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-09 14:23:30] 2026-02-09 13:23:30,465 | INFO     | traces error code: 0
[2026-02-09 14:23:30] 2026-02-09 13:23:30,466 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-09 14:23:30] 2026-02-09 13:23:30,543 [wrapper] ==== pilot stdout END ====
[2026-02-09 14:23:30] 2026-02-09 13:23:30,548 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-09 14:23:30] 2026-02-09 13:23:30,552 [wrapper] pilotpid: 311617
[2026-02-09 14:23:30] 2026-02-09 13:23:30,556 [wrapper] Pilot exit status: 0
[2026-02-09 14:23:30] 2026-02-09 13:23:30,568 [wrapper] pandaids: 7008213758
[2026-02-09 14:23:30] 2026-02-09 13:23:30,591 [wrapper] cleanup supervisor_pilot  322918 311618
[2026-02-09 14:23:30] 2026-02-09 13:23:30,596 [wrapper] Test setup, not cleaning
[2026-02-09 14:23:30] 2026-02-09 13:23:30,600 [wrapper] apfmon messages muted
[2026-02-09 14:23:30] 2026-02-09 13:23:30,604 [wrapper] ==== wrapper stdout END ====
[2026-02-09 14:23:30] 2026-02-09 13:23:30,608 [wrapper] ==== wrapper stderr END ====
[2026-02-09 14:23:30]  *** Error codes and diagnostics ***
[2026-02-09 14:23:30]     "exeErrorCode": 0,
[2026-02-09 14:23:30]     "exeErrorDiag": "",
[2026-02-09 14:23:30]     "pilotErrorCode": 0,
[2026-02-09 14:23:30]     "pilotErrorDiag": "",
[2026-02-09 14:23:30]  *** Listing of results directory ***
[2026-02-09 14:23:30] total 945788
[2026-02-09 14:23:30] -rw-r--r-- 1 boinc boinc    584627 Feb  8 20:50 pilot3.tar.gz
[2026-02-09 14:23:30] -rwx------ 1 boinc boinc     36322 Feb  8 20:50 runpilot2-wrapper.sh
[2026-02-09 14:23:30] -rw-r--r-- 1 boinc boinc      5111 Feb  8 20:51 queuedata.json
[2026-02-09 14:23:30] -rw-r--r-- 1 boinc boinc       100 Feb  9 12:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-09 14:23:30] -rwxr-xr-x 1 boinc boinc      7986 Feb  9 12:39 run_atlas
[2026-02-09 14:23:30] -rw-r--r-- 1 boinc boinc       105 Feb  9 12:39 job.xml
[2026-02-09 14:23:30] -rw-r--r-- 2 boinc boinc 680546516 Feb  9 12:39 EVNT.48431094._000567.pool.root.1
[2026-02-09 14:23:30] -rw-r--r-- 2 boinc boinc    597958 Feb  9 12:39 input.tar.gz
[2026-02-09 14:23:30] -rw-r--r-- 2 boinc boinc     15845 Feb  9 12:39 start_atlas.sh
[2026-02-09 14:23:30] drwxrwx--x 2 boinc boinc      4096 Feb  9 12:39 shared
[2026-02-09 14:23:30] -rw-r--r-- 1 boinc boinc         0 Feb  9 12:39 boinc_setup_complete
[2026-02-09 14:23:30] -rw-r--r-- 1 boinc boinc      6370 Feb  9 12:39 init_data.xml
[2026-02-09 14:23:30] -rw-r--r-- 1 boinc boinc         0 Feb  9 12:39 boinc_lockfile
[2026-02-09 14:23:30] -rw-r--r-- 1 boinc boinc      2554 Feb  9 12:39 pandaJob.out
[2026-02-09 14:23:30] -rw------- 1 boinc boinc   1009480 Feb  9 12:39 agis_schedconf.cvmfs.json
[2026-02-09 14:23:30] -rw------- 1 boinc boinc   1513144 Feb  9 12:39 agis_ddmendpoints.agis.ALL.json
[2026-02-09 14:23:30] -rw------- 1 boinc boinc       421 Feb  9 12:39 workernode_map.json
[2026-02-09 14:23:30] drwx------ 5 boinc boinc      4096 Feb  9 12:39 pilot3
[2026-02-09 14:23:30] -rw------- 1 boinc boinc 281673285 Feb  9 14:22 HITS.48431096._011466.pool.root.1
[2026-02-09 14:23:30] -rw-r--r-- 1 boinc boinc       530 Feb  9 14:22 boinc_task_state.xml
[2026-02-09 14:23:30] -rw------- 1 boinc boinc      1021 Feb  9 14:22 memory_monitor_summary.json
[2026-02-09 14:23:30] -rw------- 1 boinc boinc    276382 Feb  9 14:22 log.48431096._011466.job.log.tgz.1
[2026-02-09 14:23:30] -rw------- 1 boinc boinc      6321 Feb  9 14:22 heartbeat.json
[2026-02-09 14:23:30] -rw-r--r-- 1 boinc boinc        27 Feb  9 14:23 wrapper_checkpoint.txt
[2026-02-09 14:23:30] -rw-r--r-- 1 boinc boinc      8192 Feb  9 14:23 boinc_mmap_file
[2026-02-09 14:23:30] -rw------- 1 boinc boinc        95 Feb  9 14:23 pilot_heartbeat.json
[2026-02-09 14:23:30] -rw------- 1 boinc boinc      4747 Feb  9 14:23 pilotlog.txt
[2026-02-09 14:23:30] -rw------- 1 boinc boinc    896534 Feb  9 14:23 log.48431096._011466.job.log.1
[2026-02-09 14:23:30] -rw------- 1 boinc boinc       357 Feb  9 14:23 output.list
[2026-02-09 14:23:30] -rw-r--r-- 1 boinc boinc       620 Feb  9 14:23 runtime_log
[2026-02-09 14:23:30] -rw------- 1 boinc boinc   1187840 Feb  9 14:23 result.tar.gz
[2026-02-09 14:23:30] -rw------- 1 boinc boinc       658 Feb  9 14:23 vLBODmvyP98nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmSGeKDmXHjMfm.diag
[2026-02-09 14:23:30] -rw-r--r-- 1 boinc boinc      8901 Feb  9 14:23 runtime_log.err
[2026-02-09 14:23:30] -rw-r--r-- 1 boinc boinc      7066 Feb  9 14:23 stderr.txt
[2026-02-09 14:23:30] HITS file was successfully produced:
[2026-02-09 14:23:30] -rw------- 1 boinc boinc 281673285 Feb  9 14:22 shared/HITS.pool.root.1
[2026-02-09 14:23:30]  *** Contents of shared directory: ***
[2026-02-09 14:23:30] total 941440
[2026-02-09 14:23:30] -rw-r--r-- 2 boinc boinc 680546516 Feb  9 12:39 ATLAS.root_0
[2026-02-09 14:23:30] -rw-r--r-- 2 boinc boinc    597958 Feb  9 12:39 input.tar.gz
[2026-02-09 14:23:30] -rw-r--r-- 2 boinc boinc     15845 Feb  9 12:39 start_atlas.sh
[2026-02-09 14:23:30] -rw------- 1 boinc boinc 281673285 Feb  9 14:22 HITS.pool.root.1
[2026-02-09 14:23:30] -rw------- 1 boinc boinc   1187840 Feb  9 14:23 result.tar.gz
14:23:32 (307519): run_atlas exited; CPU time 23729.591901
14:23:32 (307519): called boinc_finish(0)

</stderr_txt>
]]>

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