Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
12:25:40 (2377783): wrapper (7.7.26015): starting
12:25:40 (2377783): wrapper: running run_atlas (--nthreads 3)
[2026-02-09 12:25:40] Arguments: --nthreads 3
[2026-02-09 12:25:40] Threads: 3
[2026-02-09 12:25:40] Checking for CVMFS
[2026-02-09 12:25:40] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-09 12:25:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-09 12:25:42] Running cvmfs_config stat atlas.cern.ch
[2026-02-09 12:25:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-09 12:25:42] 2.9.2.0 1622115 4556 79092 156054 1 49 26336279 36864000 0 130560 0 1965220 99.984 164778 17574 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-09 12:25:42] CVMFS is ok
[2026-02-09 12:25:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-09 12:25:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-09 12:25:42] Further information can be found at the LHC@home message board.
[2026-02-09 12:25:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-09 12:25:42] Checking for apptainer binary...
[2026-02-09 12:25:42] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-09 12:25:42] Running /usr/bin/apptainer --version
[2026-02-09 12:25:42] apptainer version 1.4.1-1.1
[2026-02-09 12:25:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-09 12:25:42] magicA246a
[2026-02-09 12:25:42] apptainer works
[2026-02-09 12:25:42] Set ATHENA_PROC_NUMBER=3
[2026-02-09 12:25:42] Set ATHENA_CORE_NUMBER=3
[2026-02-09 12:25:42] Starting ATLAS job with PandaID=7008210455
[2026-02-09 12:25:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-09 14:28:23]  *** The last 200 lines of the pilot log: ***
[2026-02-09 14:28:23] 2026-02-09 13:27:54,986 | INFO     | [data] copytool_in thread has finished
[2026-02-09 14:28:23] 2026-02-09 13:27:55,008 | INFO     | [payload] failed_post thread has finished
[2026-02-09 14:28:23] 2026-02-09 13:27:55,055 | INFO     | [payload] control thread has finished
[2026-02-09 14:28:23] 2026-02-09 13:27:55,199 | INFO     | [job] control thread has finished
[2026-02-09 14:28:23] 2026-02-09 13:27:55,429 | INFO     | [payload] execute_payloads thread has finished
[2026-02-09 14:28:23] 2026-02-09 13:27:55,757 | INFO     | [payload] validate_post thread has finished
[2026-02-09 14:28:23] 2026-02-09 13:27:55,922 | INFO     | [data] copytool_out thread has finished
[2026-02-09 14:28:23] 2026-02-09 13:27:55,977 | WARNING  | process 2386287 can no longer be monitored (due to stat problems) - aborting
[2026-02-09 14:28:23] 2026-02-09 13:27:56,016 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-09 14:28:23] 2026-02-09 13:27:56,066 | INFO     | number of running child processes to parent process 2386287: 1
[2026-02-09 14:28:23] 2026-02-09 13:27:56,066 | INFO     | maximum number of monitored processes: 6
[2026-02-09 14:28:23] 2026-02-09 13:27:56,066 | INFO     | aborting job monitoring since job object (job id=7008210455) has expired
[2026-02-09 14:28:23] 2026-02-09 13:27:56,066 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-09 14:28:23] 2026-02-09 13:27:56,066 | INFO     | will abort loop
[2026-02-09 14:28:23] 2026-02-09 13:27:57,071 | INFO     | [job] job monitor thread has finished
[2026-02-09 14:28:23] 2026-02-09 13:27:57,227 | INFO     | [data] queue_monitor thread has finished
[2026-02-09 14:28:23] 2026-02-09 13:27:59,603 | INFO     | [monitor] cgroup control has ended
[2026-02-09 14:28:23] 2026-02-09 13:28:01,293 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139738870130496)>', '<ExcThread(monitor, started 139738237368064)>']
[2026-02-09 14:28:23] 2026-02-09 13:28:06,319 | INFO     | all workflow threads have been joined
[2026-02-09 14:28:23] 2026-02-09 13:28:06,319 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-09 14:28:23] 2026-02-09 13:28:06,319 | INFO     | traces error code: 0
[2026-02-09 14:28:23] 2026-02-09 13:28:06,319 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-09 14:28:23] 2026-02-09 13:28:23,218 | INFO     | PID=2381832 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-09 14:28:23] 2026-02-09 13:28:23,218 | INFO     | found 0 job(s) in 20 queues
[2026-02-09 14:28:23] 2026-02-09 13:28:23,218 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-09 14:28:23] 2026-02-09 13:28:23,219 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-09 14:28:23] 2026-02-09 13:28:23,219 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-09 14:28:23] 2026-02-09 13:28:23,219 | INFO     | [monitor] control thread has ended
[2026-02-09 14:28:23] 2026-02-09 13:28:23,267 [wrapper] ==== pilot stdout END ====
[2026-02-09 14:28:23] 2026-02-09 13:28:23,269 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-09 14:28:23] 2026-02-09 13:28:23,272 [wrapper] pilotpid: 2381832
[2026-02-09 14:28:23] 2026-02-09 13:28:23,274 [wrapper] Pilot exit status: 0
[2026-02-09 14:28:23] 2026-02-09 13:28:23,282 [wrapper] pandaids: 7008210455
[2026-02-09 14:28:23] 2026-02-09 13:28:23,301 [wrapper] cleanup supervisor_pilot 2393971 2381833
[2026-02-09 14:28:23] 2026-02-09 13:28:23,303 [wrapper] Test setup, not cleaning
[2026-02-09 14:28:23] 2026-02-09 13:28:23,306 [wrapper] apfmon messages muted
[2026-02-09 14:28:23] 2026-02-09 13:28:23,308 [wrapper] ==== wrapper stdout END ====
[2026-02-09 14:28:23] 2026-02-09 13:28:23,310 [wrapper] ==== wrapper stderr END ====
[2026-02-09 14:28:23]  *** Error codes and diagnostics ***
[2026-02-09 14:28:23]     "exeErrorCode": 0,
[2026-02-09 14:28:23]     "exeErrorDiag": "",
[2026-02-09 14:28:23]     "pilotErrorCode": 0,
[2026-02-09 14:28:23]     "pilotErrorDiag": "",
[2026-02-09 14:28:23]  *** Listing of results directory ***
[2026-02-09 14:28:23] total 947136
[2026-02-09 14:28:23] -rw-r--r-- 1 boinc boinc    584627 Feb  8 20:50 pilot3.tar.gz
[2026-02-09 14:28:23] -rw-r--r-- 1 boinc boinc      5111 Feb  8 20:50 queuedata.json
[2026-02-09 14:28:23] -rwx------ 1 boinc boinc     36322 Feb  8 20:50 runpilot2-wrapper.sh
[2026-02-09 14:28:23] -rw-r--r-- 1 boinc boinc       100 Feb  9 12:25 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-09 14:28:23] -rwxr-xr-x 1 boinc boinc      7986 Feb  9 12:25 run_atlas
[2026-02-09 14:28:23] -rw-r--r-- 1 boinc boinc       105 Feb  9 12:25 job.xml
[2026-02-09 14:28:23] -rw-r--r-- 2 boinc boinc 676332974 Feb  9 12:25 EVNT.48431094._000544.pool.root.1
[2026-02-09 14:28:23] -rw-r--r-- 2 boinc boinc    597951 Feb  9 12:25 input.tar.gz
[2026-02-09 14:28:23] -rw-r--r-- 2 boinc boinc     15845 Feb  9 12:25 start_atlas.sh
[2026-02-09 14:28:23] drwxrwx--x 2 boinc boinc      4096 Feb  9 12:25 shared
[2026-02-09 14:28:23] -rw-r--r-- 1 boinc boinc         0 Feb  9 12:25 boinc_setup_complete
[2026-02-09 14:28:23] -rw-r--r-- 1 boinc boinc      6447 Feb  9 12:25 init_data.xml
[2026-02-09 14:28:23] -rw-r--r-- 1 boinc boinc         0 Feb  9 12:25 boinc_lockfile
[2026-02-09 14:28:23] -rw-r--r-- 1 boinc boinc      2556 Feb  9 12:25 pandaJob.out
[2026-02-09 14:28:23] -rw------- 1 boinc boinc   1009480 Feb  9 12:25 agis_schedconf.cvmfs.json
[2026-02-09 14:28:23] -rw------- 1 boinc boinc   1513144 Feb  9 12:25 agis_ddmendpoints.agis.ALL.json
[2026-02-09 14:28:23] -rw------- 1 boinc boinc       428 Feb  9 12:25 workernode_map.json
[2026-02-09 14:28:23] drwx------ 5 boinc boinc      4096 Feb  9 12:25 pilot3
[2026-02-09 14:28:23] -rw------- 1 boinc boinc 286875838 Feb  9 14:27 HITS.48431096._011096.pool.root.1
[2026-02-09 14:28:23] -rw------- 1 boinc boinc        95 Feb  9 14:27 pilot_heartbeat.json
[2026-02-09 14:28:23] -rw-r--r-- 1 boinc boinc       530 Feb  9 14:27 boinc_task_state.xml
[2026-02-09 14:28:23] -rw------- 1 boinc boinc      1017 Feb  9 14:27 memory_monitor_summary.json
[2026-02-09 14:28:23] -rw------- 1 boinc boinc    312182 Feb  9 14:27 log.48431096._011096.job.log.tgz.1
[2026-02-09 14:28:23] -rw------- 1 boinc boinc      6314 Feb  9 14:27 heartbeat.json
[2026-02-09 14:28:23] -rw-r--r-- 1 boinc boinc        27 Feb  9 14:28 wrapper_checkpoint.txt
[2026-02-09 14:28:23] -rw-r--r-- 1 boinc boinc      8192 Feb  9 14:28 boinc_mmap_file
[2026-02-09 14:28:23] -rw------- 1 boinc boinc       747 Feb  9 14:28 pilotlog.txt
[2026-02-09 14:28:23] -rw------- 1 boinc boinc   1052998 Feb  9 14:28 log.48431096._011096.job.log.1
[2026-02-09 14:28:23] -rw------- 1 boinc boinc       357 Feb  9 14:28 output.list
[2026-02-09 14:28:23] -rw-r--r-- 1 boinc boinc       620 Feb  9 14:28 runtime_log
[2026-02-09 14:28:23] -rw------- 1 boinc boinc   1382400 Feb  9 14:28 result.tar.gz
[2026-02-09 14:28:23] -rw------- 1 boinc boinc       661 Feb  9 14:28 ucHLDmhyP98nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmkDeKDmVzcpKn.diag
[2026-02-09 14:28:23] -rw-r--r-- 1 boinc boinc      8916 Feb  9 14:28 runtime_log.err
[2026-02-09 14:28:23] -rw-r--r-- 1 boinc boinc      6445 Feb  9 14:28 stderr.txt
[2026-02-09 14:28:23] HITS file was successfully produced:
[2026-02-09 14:28:23] -rw------- 1 boinc boinc 286875838 Feb  9 14:27 shared/HITS.pool.root.1
[2026-02-09 14:28:23]  *** Contents of shared directory: ***
[2026-02-09 14:28:23] total 942600
[2026-02-09 14:28:23] -rw-r--r-- 2 boinc boinc 676332974 Feb  9 12:25 ATLAS.root_0
[2026-02-09 14:28:23] -rw-r--r-- 2 boinc boinc    597951 Feb  9 12:25 input.tar.gz
[2026-02-09 14:28:23] -rw-r--r-- 2 boinc boinc     15845 Feb  9 12:25 start_atlas.sh
[2026-02-09 14:28:23] -rw------- 1 boinc boinc 286875838 Feb  9 14:27 HITS.pool.root.1
[2026-02-09 14:28:23] -rw------- 1 boinc boinc   1382400 Feb  9 14:28 result.tar.gz
14:28:25 (2377783): run_atlas exited; CPU time 21326.004236
14:28:25 (2377783): called boinc_finish(0)

</stderr_txt>
]]>

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