Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
13:42:24 (3809696): wrapper (7.7.26015): starting
13:42:24 (3809696): wrapper: running run_atlas (--nthreads 2)
[2026-02-09 13:42:24] Arguments: --nthreads 2
[2026-02-09 13:42:24] Threads: 2
[2026-02-09 13:42:24] Checking for CVMFS
[2026-02-09 13:42:24] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-09 13:42:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-09 13:42:25] Running cvmfs_config stat atlas.cern.ch
[2026-02-09 13:42:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-09 13:42:25] 2.9.2.0 3340523 4789 58652 156054 0 50 29222010 36864001 0 130560 0 1389568 99.977 176796 14255 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-09 13:42:25] CVMFS is ok
[2026-02-09 13:42:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-09 13:42:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-09 13:42:25] Further information can be found at the LHC@home message board.
[2026-02-09 13:42:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-09 13:42:25] Checking for apptainer binary...
[2026-02-09 13:42:25] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-09 13:42:25] Running /usr/bin/apptainer --version
[2026-02-09 13:42:25] apptainer version 1.4.1-1.1
[2026-02-09 13:42:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-09 13:42:25] thA315
[2026-02-09 13:42:25] apptainer works
[2026-02-09 13:42:25] Set ATHENA_PROC_NUMBER=2
[2026-02-09 13:42:25] Set ATHENA_CORE_NUMBER=2
[2026-02-09 13:42:25] Starting ATLAS job with PandaID=7005779063
[2026-02-09 13:42:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-09 15:51:11]  *** The last 200 lines of the pilot log: ***
[2026-02-09 15:51:11] 2026-02-09 14:50:40,509 | INFO     | all payload control threads have been joined
[2026-02-09 15:51:11] 2026-02-09 14:50:40,890 | INFO     | all data control threads have been joined
[2026-02-09 15:51:11] 2026-02-09 14:50:41,058 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-09 15:51:11] 2026-02-09 14:50:41,329 | INFO     | all job control threads have been joined
[2026-02-09 15:51:11] 2026-02-09 14:50:41,446 | INFO     | [job] retrieve thread has finished
[2026-02-09 15:51:11] 2026-02-09 14:50:41,447 | INFO     | [job] queue monitor thread has finished
[2026-02-09 15:51:11] 2026-02-09 14:50:41,497 | INFO     | [job] job monitor thread has finished
[2026-02-09 15:51:11] 2026-02-09 14:50:41,515 | INFO     | [payload] control thread has finished
[2026-02-09 15:51:11] 2026-02-09 14:50:41,854 | INFO     | [data] copytool_in thread has finished
[2026-02-09 15:51:11] 2026-02-09 14:50:41,896 | INFO     | [payload] validate_pre thread has finished
[2026-02-09 15:51:11] 2026-02-09 14:50:41,896 | INFO     | [data] control thread has finished
[2026-02-09 15:51:11] 2026-02-09 14:50:41,908 | INFO     | [job] validate thread has finished
[2026-02-09 15:51:11] 2026-02-09 14:50:41,987 | INFO     | [job] create_data_payload thread has finished
[2026-02-09 15:51:11] 2026-02-09 14:50:42,019 | INFO     | [payload] execute_payloads thread has finished
[2026-02-09 15:51:11] 2026-02-09 14:50:42,230 | INFO     | [payload] failed_post thread has finished
[2026-02-09 15:51:11] 2026-02-09 14:50:42,335 | INFO     | [job] control thread has finished
[2026-02-09 15:51:11] 2026-02-09 14:50:42,660 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-09 15:51:11] 2026-02-09 14:50:42,679 | INFO     | [payload] validate_post thread has finished
[2026-02-09 15:51:11] 2026-02-09 14:50:43,064 | INFO     | [data] copytool_out thread has finished
[2026-02-09 15:51:11] 2026-02-09 14:50:46,667 | INFO     | [data] queue_monitor thread has finished
[2026-02-09 15:51:11] 2026-02-09 14:50:51,008 | INFO     | job.realtimelogging is not enabled
[2026-02-09 15:51:11] 2026-02-09 14:50:52,014 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-09 15:51:11] 2026-02-09 14:50:55,970 | INFO     | [monitor] cgroup control has ended
[2026-02-09 15:51:11] 2026-02-09 14:50:56,303 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140562605885248)>', '<ExcThread(monitor, started 140562082535168)>']
[2026-02-09 15:51:11] 2026-02-09 14:51:01,328 | INFO     | all workflow threads have been joined
[2026-02-09 15:51:11] 2026-02-09 14:51:01,329 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-09 15:51:11] 2026-02-09 14:51:01,329 | INFO     | traces error code: 0
[2026-02-09 15:51:11] 2026-02-09 14:51:01,330 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-09 15:51:11] 2026-02-09 14:51:11,477 | INFO     | PID=3813735 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-09 15:51:11] 2026-02-09 14:51:11,477 | INFO     | found 0 job(s) in 20 queues
[2026-02-09 15:51:11] 2026-02-09 14:51:11,477 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-09 15:51:11] 2026-02-09 14:51:11,477 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-09 15:51:11] 2026-02-09 14:51:11,477 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-09 15:51:11] 2026-02-09 14:51:11,477 | INFO     | [monitor] control thread has ended
[2026-02-09 15:51:11] 2026-02-09 14:51:11,515 [wrapper] ==== pilot stdout END ====
[2026-02-09 15:51:11] 2026-02-09 14:51:11,517 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-09 15:51:11] 2026-02-09 14:51:11,520 [wrapper] pilotpid: 3813735
[2026-02-09 15:51:11] 2026-02-09 14:51:11,522 [wrapper] Pilot exit status: 0
[2026-02-09 15:51:11] 2026-02-09 14:51:11,527 [wrapper] pandaids: 7005779063
[2026-02-09 15:51:11] 2026-02-09 14:51:11,539 [wrapper] cleanup supervisor_pilot 3824239 3813736
[2026-02-09 15:51:11] 2026-02-09 14:51:11,541 [wrapper] Test setup, not cleaning
[2026-02-09 15:51:11] 2026-02-09 14:51:11,544 [wrapper] apfmon messages muted
[2026-02-09 15:51:11] 2026-02-09 14:51:11,545 [wrapper] ==== wrapper stdout END ====
[2026-02-09 15:51:11] 2026-02-09 14:51:11,547 [wrapper] ==== wrapper stderr END ====
[2026-02-09 15:51:11]  *** Error codes and diagnostics ***
[2026-02-09 15:51:11]     "exeErrorCode": 0,
[2026-02-09 15:51:11]     "exeErrorDiag": "",
[2026-02-09 15:51:11]     "pilotErrorCode": 0,
[2026-02-09 15:51:11]     "pilotErrorDiag": "",
[2026-02-09 15:51:11]  *** Listing of results directory ***
[2026-02-09 15:51:11] total 671856
[2026-02-09 15:51:11] -rw-r--r-- 1 boinc boinc    584627 Feb  9 00:54 pilot3.tar.gz
[2026-02-09 15:51:11] -rw-r--r-- 1 boinc boinc      5111 Feb  9 00:55 queuedata.json
[2026-02-09 15:51:11] -rwx------ 1 boinc boinc     36322 Feb  9 00:55 runpilot2-wrapper.sh
[2026-02-09 15:51:11] -rw-r--r-- 1 boinc boinc       100 Feb  9 13:42 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-09 15:51:11] -rwxr-xr-x 1 boinc boinc      7986 Feb  9 13:42 run_atlas
[2026-02-09 15:51:11] -rw-r--r-- 1 boinc boinc       105 Feb  9 13:42 job.xml
[2026-02-09 15:51:11] -rw-r--r-- 2 boinc boinc 494593170 Feb  9 13:42 EVNT.48318008._000273.pool.root.1
[2026-02-09 15:51:11] -rw-r--r-- 2 boinc boinc    597953 Feb  9 13:42 input.tar.gz
[2026-02-09 15:51:11] -rw-r--r-- 2 boinc boinc     15845 Feb  9 13:42 start_atlas.sh
[2026-02-09 15:51:11] drwxrwx--x 2 boinc boinc      4096 Feb  9 13:42 shared
[2026-02-09 15:51:11] -rw-r--r-- 1 boinc boinc         0 Feb  9 13:42 boinc_setup_complete
[2026-02-09 15:51:11] -rw-r--r-- 1 boinc boinc      6206 Feb  9 13:42 init_data.xml
[2026-02-09 15:51:11] -rw-r--r-- 1 boinc boinc         0 Feb  9 13:42 boinc_lockfile
[2026-02-09 15:51:11] -rw-r--r-- 1 boinc boinc      2527 Feb  9 13:42 pandaJob.out
[2026-02-09 15:51:11] -rw------- 1 boinc boinc   1009480 Feb  9 13:42 agis_schedconf.cvmfs.json
[2026-02-09 15:51:11] -rw------- 1 boinc boinc   1513144 Feb  9 13:42 agis_ddmendpoints.agis.ALL.json
[2026-02-09 15:51:11] -rw------- 1 boinc boinc       418 Feb  9 13:42 workernode_map.json
[2026-02-09 15:51:11] drwx------ 5 boinc boinc      4096 Feb  9 13:42 pilot3
[2026-02-09 15:51:11] -rw-r--r-- 1 boinc boinc       530 Feb  9 15:50 boinc_task_state.xml
[2026-02-09 15:51:11] -rw------- 1 boinc boinc 186723636 Feb  9 15:50 HITS.48318010._015065.pool.root.1
[2026-02-09 15:51:11] -rw------- 1 boinc boinc        95 Feb  9 15:50 pilot_heartbeat.json
[2026-02-09 15:51:11] -rw------- 1 boinc boinc      1020 Feb  9 15:50 memory_monitor_summary.json
[2026-02-09 15:51:11] -rw------- 1 boinc boinc    269812 Feb  9 15:50 log.48318010._015065.job.log.tgz.1
[2026-02-09 15:51:11] -rw------- 1 boinc boinc      6290 Feb  9 15:50 heartbeat.json
[2026-02-09 15:51:11] -rw-r--r-- 1 boinc boinc      8192 Feb  9 15:50 boinc_mmap_file
[2026-02-09 15:51:11] -rw-r--r-- 1 boinc boinc        27 Feb  9 15:50 wrapper_checkpoint.txt
[2026-02-09 15:51:11] -rw------- 1 boinc boinc       747 Feb  9 15:51 pilotlog.txt
[2026-02-09 15:51:11] -rw------- 1 boinc boinc   1101344 Feb  9 15:51 log.48318010._015065.job.log.1
[2026-02-09 15:51:11] -rw------- 1 boinc boinc       357 Feb  9 15:51 output.list
[2026-02-09 15:51:11] -rw-r--r-- 1 boinc boinc       620 Feb  9 15:51 runtime_log
[2026-02-09 15:51:11] -rw------- 1 boinc boinc   1392640 Feb  9 15:51 result.tar.gz
[2026-02-09 15:51:11] -rw-r--r-- 1 boinc boinc      8896 Feb  9 15:51 runtime_log.err
[2026-02-09 15:51:11] -rw------- 1 boinc boinc       658 Feb  9 15:51 AmrKDm7nT98nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmTdeKDmZM5QJm.diag
[2026-02-09 15:51:11] -rw-r--r-- 1 boinc boinc      6961 Feb  9 15:51 stderr.txt
[2026-02-09 15:51:11] HITS file was successfully produced:
[2026-02-09 15:51:11] -rw------- 1 boinc boinc 186723636 Feb  9 15:50 shared/HITS.pool.root.1
[2026-02-09 15:51:11]  *** Contents of shared directory: ***
[2026-02-09 15:51:11] total 667320
[2026-02-09 15:51:11] -rw-r--r-- 2 boinc boinc 494593170 Feb  9 13:42 ATLAS.root_0
[2026-02-09 15:51:11] -rw-r--r-- 2 boinc boinc    597953 Feb  9 13:42 input.tar.gz
[2026-02-09 15:51:11] -rw-r--r-- 2 boinc boinc     15845 Feb  9 13:42 start_atlas.sh
[2026-02-09 15:51:11] -rw------- 1 boinc boinc 186723636 Feb  9 15:50 HITS.pool.root.1
[2026-02-09 15:51:11] -rw------- 1 boinc boinc   1392640 Feb  9 15:51 result.tar.gz
15:51:13 (3809696): run_atlas exited; CPU time 14900.210816
15:51:13 (3809696): called boinc_finish(0)

</stderr_txt>
]]>

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