Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
13:17:37 (509034): wrapper (7.7.26015): starting
13:17:37 (509034): wrapper: running run_atlas (--nthreads 3)
[2026-02-09 13:17:37] Arguments: --nthreads 3
[2026-02-09 13:17:37] Threads: 3
[2026-02-09 13:17:37] Checking for CVMFS
[2026-02-09 13:17:37] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-09 13:17:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-09 13:17:41] Running cvmfs_config stat atlas.cern.ch
[2026-02-09 13:17:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-09 13:17:41] 2.9.2.0 4008882 4638 83496 156054 3 50 36405767 36864000 0 130560 0 1966522 99.983 170503 6303 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-09 13:17:41] CVMFS is ok
[2026-02-09 13:17:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-09 13:17:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-09 13:17:41] Further information can be found at the LHC@home message board.
[2026-02-09 13:17:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-09 13:17:41] Checking for apptainer binary...
[2026-02-09 13:17:41] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-09 13:17:41] Running /usr/bin/apptainer --version
[2026-02-09 13:17:41] apptainer version 1.4.1-1.1
[2026-02-09 13:17:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-09 13:17:41] belleA263b
[2026-02-09 13:17:41] apptainer works
[2026-02-09 13:17:41] Set ATHENA_PROC_NUMBER=3
[2026-02-09 13:17:41] Set ATHENA_CORE_NUMBER=3
[2026-02-09 13:17:41] Starting ATLAS job with PandaID=7005746789
[2026-02-09 13:17:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-09 14:40:03]  *** The last 200 lines of the pilot log: ***
[2026-02-09 14:40:03]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-09 14:40:03]  is_altstaged=None
[2026-02-09 14:40:03]  is_tar=False
[2026-02-09 14:40:03]  lfn=log.48318010._013457.job.log.tgz.1
[2026-02-09 14:40:03]  mtime=0
[2026-02-09 14:40:03]  protocol_id=None
[2026-02-09 14:40:03]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-09 14:40:03]  replicas=None
[2026-02-09 14:40:03]  scope=mc23_13p6TeV
[2026-02-09 14:40:03]  status=None
[2026-02-09 14:40:03]  status_code=0
[2026-02-09 14:40:03]  storage_token=
[2026-02-09 14:40:03]  surl=/local/data/boinc/slots/0/PanDA_Pilot-7005746789/log.48318010._013457.job.log.tgz.1
[2026-02-09 14:40:03]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9e/8e/log.48318010._013457.job.log.tgz.1
[2026-02-09 14:40:03]  workdir=None
[2026-02-09 14:40:03] ]
[2026-02-09 14:40:03] 2026-02-09 13:38:53,910 | INFO     | transferring file log.48318010._013457.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-7005746789/log.48318010._013457.job.log.tgz.1 to /local/data/boinc/
[2026-02-09 14:40:03] 2026-02-09 13:38:53,910 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-7005746789/log.48318010._013457.job.log.tgz.1 /local/data/boinc/slots/0/log.48318010._0134
[2026-02-09 14:40:03] 2026-02-09 13:38:53,923 | INFO     | adding to output.list: log.48318010._013457.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9e/8e/log.48318010._013457.job.log.tg
[2026-02-09 14:40:03] 2026-02-09 13:38:53,924 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-09 14:40:03] 2026-02-09 13:38:53,924 | INFO     | summary of transferred files:
[2026-02-09 14:40:03] 2026-02-09 13:38:53,924 | INFO     |  -- lfn=log.48318010._013457.job.log.tgz.1, status_code=0, status=transferred
[2026-02-09 14:40:03] 2026-02-09 13:38:53,924 | INFO     | stage-out finished correctly
[2026-02-09 14:40:03] 2026-02-09 13:38:53,954 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-09 14:40:03] 2026-02-09 13:38:54,174 | INFO     | time since job start (4862s) is within the limit (349056.0s)
[2026-02-09 14:40:03] 2026-02-09 13:38:54,202 | INFO     | monitor loop #376: job 0:7005746789 is in state 'finished'
[2026-02-09 14:40:03] 2026-02-09 13:38:54,202 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-09 14:40:03] 2026-02-09 13:38:56,180 | INFO     | time since job start (4864s) is within the limit (349056.0s)
[2026-02-09 14:40:03] 2026-02-09 13:38:56,706 | INFO     | monitor loop #377: job 0:7005746789 is in state 'finished'
[2026-02-09 14:40:03] 2026-02-09 13:38:56,706 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-09 14:40:03] 2026-02-09 13:38:56,899 | INFO     | job 7005746789 has state=finished
[2026-02-09 14:40:03] 2026-02-09 13:38:56,899 | INFO     | preparing for final server update for job 7005746789 in state='finished'
[2026-02-09 14:40:03] 2026-02-09 13:38:56,899 | INFO     | reading metadata from: /local/data/boinc/slots/0/PanDA_Pilot-7005746789/jobReport.json
[2026-02-09 14:40:03] 2026-02-09 13:38:56,900 | INFO     | added worker_node to metadata from /local/data/boinc/slots/0/workernode_map.json
[2026-02-09 14:40:03] 2026-02-09 13:38:56,901 | INFO     | this job has now completed (state=finished)
[2026-02-09 14:40:03] 2026-02-09 13:38:56,901 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-09 14:40:03] 2026-02-09 13:38:56,901 | INFO     | log transfer has been attempted: DONE
[2026-02-09 14:40:03] 2026-02-09 13:38:56,901 | INFO     | job 7005746789 has finished - writing final server update
[2026-02-09 14:40:03] 2026-02-09 13:38:56,901 | INFO     | total number of processed events: 400 (read)
[2026-02-09 14:40:03] 2026-02-09 13:38:56,902 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-7005746789/memory_monitor_summary.json (trf name=prmon)
[2026-02-09 14:40:03] 2026-02-09 13:38:56,902 | INFO     | extracted standard info from prmon json
[2026-02-09 14:40:03] 2026-02-09 13:38:56,902 | INFO     | extracted standard memory fields from prmon json
[2026-02-09 14:40:03] 2026-02-09 13:38:56,902 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-09 14:40:03] 2026-02-09 13:38:56,902 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-09 14:40:03] 2026-02-09 13:38:56,903 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-09 14:40:03] 2026-02-09 13:38:56,903 | INFO     | fitting pss+swap vs Time
[2026-02-09 14:40:03] 2026-02-09 13:38:56,903 | INFO     | sum of square deviations: 120605052.0
[2026-02-09 14:40:03] 2026-02-09 13:38:56,904 | INFO     | sum of deviations: -4369549072.0
[2026-02-09 14:40:03] 2026-02-09 13:38:56,904 | INFO     | mean x: 1770641990.0
[2026-02-09 14:40:03] 2026-02-09 13:38:56,904 | INFO     | mean y: 2627735.794520548
[2026-02-09 14:40:03] 2026-02-09 13:38:56,904 | INFO     | intersect: 64153398669.07793
[2026-02-09 14:40:03] 2026-02-09 13:38:56,904 | INFO     | chi2: 0.019159876025463277
[2026-02-09 14:40:03] 2026-02-09 13:38:56,904 | INFO     | current memory leak: -36.23 B/s (using 73 data points, chi2=0.02)
[2026-02-09 14:40:03] 2026-02-09 13:38:56,904 | INFO     | could have reported an average CPU frequency of 3633 MHz (6 samples)
[2026-02-09 14:40:03] 2026-02-09 13:38:56,904 | INFO     | ..............................
[2026-02-09 14:40:03] 2026-02-09 13:38:56,904 | INFO     | . Timing measurements:
[2026-02-09 14:40:03] 2026-02-09 13:38:56,904 | INFO     | . get job = 0 s
[2026-02-09 14:40:03] 2026-02-09 13:38:56,904 | INFO     | . initial setup = 3 s
[2026-02-09 14:40:03] 2026-02-09 13:38:56,904 | INFO     | . payload setup = 3 s
[2026-02-09 14:40:03] 2026-02-09 13:38:56,904 | INFO     | . stage-in = 0 s
[2026-02-09 14:40:03] 2026-02-09 13:38:56,904 | INFO     | . payload execution = 4843 s
[2026-02-09 14:40:03] 2026-02-09 13:38:56,904 | INFO     | . stage-out = 0 s
[2026-02-09 14:40:03] 2026-02-09 13:38:56,904 | INFO     | . log creation = 0 s
[2026-02-09 14:40:03] 2026-02-09 13:38:56,904 | INFO     | ..............................
[2026-02-09 14:40:03] 2026-02-09 13:38:56,933 | INFO     | 
[2026-02-09 14:40:03] 2026-02-09 13:38:56,934 | INFO     | job summary report
[2026-02-09 14:40:03] 2026-02-09 13:38:56,934 | INFO     | --------------------------------------------------
[2026-02-09 14:40:03] 2026-02-09 13:38:56,934 | INFO     | PanDA job id: 7005746789
[2026-02-09 14:40:03] 2026-02-09 13:38:56,934 | INFO     | task id: 48318010
[2026-02-09 14:40:03] 2026-02-09 13:38:56,934 | INFO     | errors: (none)
[2026-02-09 14:40:03] 2026-02-09 13:38:56,934 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-09 14:40:03] 2026-02-09 13:38:56,934 | INFO     | pilot state: finished 
[2026-02-09 14:40:03] 2026-02-09 13:38:56,934 | INFO     | transexitcode: 0
[2026-02-09 14:40:03] 2026-02-09 13:38:56,934 | INFO     | exeerrorcode: 0
[2026-02-09 14:40:03] 2026-02-09 13:38:56,934 | INFO     | exeerrordiag: 
[2026-02-09 14:40:03] 2026-02-09 13:38:56,934 | INFO     | exitcode: 0
[2026-02-09 14:40:03] 2026-02-09 13:38:56,934 | INFO     | exitmsg: OK
[2026-02-09 14:40:03] 2026-02-09 13:38:56,934 | INFO     | cpuconsumptiontime: 13846 s
[2026-02-09 14:40:03] 2026-02-09 13:38:56,934 | INFO     | nevents: 400
[2026-02-09 14:40:03] 2026-02-09 13:38:56,934 | INFO     | neventsw: 0
[2026-02-09 14:40:03] 2026-02-09 13:38:56,934 | INFO     | pid: 517515
[2026-02-09 14:40:03] 2026-02-09 13:38:56,934 | INFO     | pgrp: 517515
[2026-02-09 14:40:03] 2026-02-09 13:38:56,934 | INFO     | corecount: 3
[2026-02-09 14:40:03] 2026-02-09 13:38:56,934 | INFO     | event service: False
[2026-02-09 14:40:03] 2026-02-09 13:38:56,934 | INFO     | sizes: {0: 2283099, 11: 2283099, 4850: 2309473, 4851: 2318533, 4854: 2318671}
[2026-02-09 14:40:03] 2026-02-09 13:38:56,934 | INFO     | --------------------------------------------------
[2026-02-09 14:40:03] 2026-02-09 13:38:56,934 | INFO     | 
[2026-02-09 14:40:03] 2026-02-09 13:38:56,934 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-02-09 14:40:03] 2026-02-09 13:38:56,948 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-09 14:40:03] 2026-02-09 13:38:56,949 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-09 14:40:03] 2026-02-09 13:38:56,949 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-09 14:40:03] 2026-02-09 13:38:56,949 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-09 14:40:03] 2026-02-09 13:38:56,949 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-09 14:40:03] 2026-02-09 13:38:56,949 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-09 14:40:03] 2026-02-09 13:38:56,949 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-09 14:40:03] 2026-02-09 13:38:56,949 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-09 14:40:03] 2026-02-09 13:38:56,949 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-09 14:40:03] 2026-02-09 13:38:56,949 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-09 14:40:03] 2026-02-09 13:38:56,949 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-09 14:40:03] 2026-02-09 13:38:56,949 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-09 14:40:03] 2026-02-09 13:38:56,949 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-09 14:40:03] 2026-02-09 13:38:56,949 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-09 14:40:03] 2026-02-09 13:38:56,949 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-09 14:40:03] 2026-02-09 13:38:56,949 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-09 14:40:03] 2026-02-09 13:38:56,949 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-09 14:40:03] 2026-02-09 13:38:56,949 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-09 14:40:03] 2026-02-09 13:38:56,949 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-09 14:40:03] 2026-02-09 13:38:56,949 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-09 14:40:03] 2026-02-09 13:38:56,949 | INFO     | job 7005746789 has completed (purged errors)
[2026-02-09 14:40:03] 2026-02-09 13:38:56,949 | INFO     | overall cleanup function is called
[2026-02-09 14:40:03] 2026-02-09 13:38:57,247 | INFO     | PID=513089 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-09 14:40:03] 2026-02-09 13:38:57,956 | INFO     | --- collectZombieJob: --- 10, [517515]
[2026-02-09 14:40:03] 2026-02-09 13:38:57,956 | INFO     | zombie collector waiting for pid 517515
[2026-02-09 14:40:03] 2026-02-09 13:38:57,956 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-09 14:40:03] 2026-02-09 13:38:57,956 | INFO     | collected zombie processes
[2026-02-09 14:40:03] 2026-02-09 13:38:57,956 | INFO     | will attempt to kill all subprocesses of pid=517515
[2026-02-09 14:40:03] 2026-02-09 13:38:58,002 | INFO     | process IDs to be killed: [517515] (in reverse order)
[2026-02-09 14:40:03] 2026-02-09 13:38:58,028 | WARNING  | found no corresponding commands to process id(s)
[2026-02-09 14:40:03] 2026-02-09 13:38:58,029 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-09 14:40:03] 2026-02-09 13:38:58,030 | INFO     | did not find any defunct processes belonging to 517515
[2026-02-09 14:40:03] 2026-02-09 13:38:58,031 | INFO     | did not find any defunct processes belonging to 517515
[2026-02-09 14:40:03] 2026-02-09 13:38:58,031 | INFO     | ready for new job
[2026-02-09 14:40:03] 2026-02-09 13:38:58,031 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-09 14:40:03] 2026-02-09 13:38:58,032 | INFO     | **************************************
[2026-02-09 14:40:03] 2026-02-09 13:38:58,032 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-09 14:40:03] 2026-02-09 13:38:58,032 | INFO     | **************************************
[2026-02-09 14:40:03] 2026-02-09 13:38:58,032 | INFO     | 
[2026-02-09 14:40:03] 2026-02-09 13:38:58,033 | INFO     | architecture information:
[2026-02-09 14:40:03] 2026-02-09 13:38:58,033 | INFO     | executing command: cat /etc/os-release
[2026-02-09 14:40:03] 2026-02-09 13:38:58,042 | INFO     | cat /etc/os-release:
[2026-02-09 14:40:03] NAME="CentOS Linux"
[2026-02-09 14:40:03] VERSION="7 (Core)"
[2026-02-09 14:40:03] ID="centos"
[2026-02-09 14:40:03] ID_LIKE="rhel fedora"
[2026-02-09 14:40:03] VERSION_ID="7"
[2026-02-09 14:40:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-09 14:40:03] ANSI_COLOR="0;31"
[2026-02-09 14:40:03] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-09 14:40:03] HOME_URL="https://www.centos.org/"
[2026-02-09 14:40:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-09 14:40:03] 
[2026-02-09 14:40:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-09 14:40:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-09 14:40:03] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-09 14:40:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-09 14:40:03] 
[2026-02-09 14:40:03] 2026-02-09 13:38:58,042 | INFO     | **************************************
[2026-02-09 14:40:03] 2026-02-09 13:38:58,546 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-09 14:40:03] 2026-02-09 13:38:58,559 | INFO     | sufficient remaining disk space (364235456512 B)
[2026-02-09 14:40:03] 2026-02-09 13:38:58,559 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-09 14:40:03] 2026-02-09 13:38:58,559 | INFO     | current server update state: UPDATING_FINAL
[2026-02-09 14:40:03] 2026-02-09 13:38:58,559 | INFO     | update_server=False
[2026-02-09 14:40:03] 2026-02-09 13:38:58,559 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-09 14:40:03] 2026-02-09 13:38:58,559 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-09 14:40:03] 2026-02-09 13:38:58,560 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-09 14:40:03] 2026-02-09 13:38:58,560 | INFO     | aborting loop
[2026-02-09 14:40:03] 2026-02-09 13:38:58,687 | INFO     | all payload control threads have been joined
[2026-02-09 14:40:03] 2026-02-09 13:38:59,311 | INFO     | all data control threads have been joined
[2026-02-09 14:40:03] 2026-02-09 13:38:59,464 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-09 14:40:03] 2026-02-09 13:38:59,563 | INFO     | [job] job monitor thread has finished
[2026-02-09 14:40:03] 2026-02-09 13:38:59,563 | INFO     | [job] retrieve thread has finished
[2026-02-09 14:40:03] 2026-02-09 13:38:59,565 | INFO     | [job] queue monitor thread has finished
[2026-02-09 14:40:03] 2026-02-09 13:38:59,693 | INFO     | [payload] control thread has finished
[2026-02-09 14:40:03] 2026-02-09 13:38:59,988 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-09 14:40:03] 2026-02-09 13:39:00,004 | INFO     | [payload] failed_post thread has finished
[2026-02-09 14:40:03] 2026-02-09 13:39:00,120 | INFO     | all job control threads have been joined
[2026-02-09 14:40:03] 2026-02-09 13:39:00,178 | INFO     | [payload] execute_payloads thread has finished
[2026-02-09 14:40:03] 2026-02-09 13:39:00,315 | INFO     | [data] control thread has finished
[2026-02-09 14:40:03] 2026-02-09 13:39:00,468 | INFO     | [job] validate thread has finished
[2026-02-09 14:40:03] 2026-02-09 13:39:00,483 | INFO     | [job] create_data_payload thread has finished
[2026-02-09 14:40:03] 2026-02-09 13:39:00,593 | INFO     | [payload] validate_pre thread has finished
[2026-02-09 14:40:03] 2026-02-09 13:39:00,605 | INFO     | [payload] validate_post thread has finished
[2026-02-09 14:40:03] 2026-02-09 13:39:00,698 | INFO     | [data] copytool_in thread has finished
[2026-02-09 14:40:03] 2026-02-09 13:39:01,125 | INFO     | [job] control thread has finished
[2026-02-09 14:40:03] 2026-02-09 13:39:01,470 | INFO     | [data] copytool_out thread has finished
[2026-02-09 14:40:03] 2026-02-09 13:39:03,995 | INFO     | [data] queue_monitor thread has finished
[2026-02-09 14:40:03] 2026-02-09 13:39:09,584 | INFO     | job.realtimelogging is not enabled
[2026-02-09 14:40:03] 2026-02-09 13:39:10,589 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-09 14:40:03] 2026-02-09 13:39:29,382 | INFO     | PID=513089 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-09 14:40:03] 2026-02-09 13:39:29,382 | INFO     | found 0 job(s) in 20 queues
[2026-02-09 14:40:03] 2026-02-09 13:39:29,382 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-09 14:40:03] 2026-02-09 13:39:29,382 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-09 14:40:03] 2026-02-09 13:39:56,745 | INFO     | [monitor] cgroup control has ended
[2026-02-09 14:40:03] 2026-02-09 13:39:58,420 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140109864343360)>', '<ExcThread(monitor, started 140109131273984)>']
[2026-02-09 14:40:03] 2026-02-09 13:39:58,538 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-09 14:40:03] 2026-02-09 13:39:58,538 | INFO     | [monitor] control thread has ended
[2026-02-09 14:40:03] 2026-02-09 13:40:03,446 | INFO     | all workflow threads have been joined
[2026-02-09 14:40:03] 2026-02-09 13:40:03,446 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-09 14:40:03] 2026-02-09 13:40:03,446 | INFO     | traces error code: 0
[2026-02-09 14:40:03] 2026-02-09 13:40:03,447 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-09 14:40:03] 2026-02-09 13:40:03,496 [wrapper] ==== pilot stdout END ====
[2026-02-09 14:40:03] 2026-02-09 13:40:03,499 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-09 14:40:03] 2026-02-09 13:40:03,502 [wrapper] pilotpid: 513089
[2026-02-09 14:40:03] 2026-02-09 13:40:03,504 [wrapper] Pilot exit status: 0
[2026-02-09 14:40:03] 2026-02-09 13:40:03,512 [wrapper] pandaids: 7005746789
[2026-02-09 14:40:03] 2026-02-09 13:40:03,530 [wrapper] cleanup supervisor_pilot  522709 513090
[2026-02-09 14:40:03] 2026-02-09 13:40:03,533 [wrapper] Test setup, not cleaning
[2026-02-09 14:40:03] 2026-02-09 13:40:03,535 [wrapper] apfmon messages muted
[2026-02-09 14:40:03] 2026-02-09 13:40:03,538 [wrapper] ==== wrapper stdout END ====
[2026-02-09 14:40:03] 2026-02-09 13:40:03,540 [wrapper] ==== wrapper stderr END ====
[2026-02-09 14:40:03]  *** Error codes and diagnostics ***
[2026-02-09 14:40:03]     "exeErrorCode": 0,
[2026-02-09 14:40:03]     "exeErrorDiag": "",
[2026-02-09 14:40:03]     "pilotErrorCode": 0,
[2026-02-09 14:40:03]     "pilotErrorDiag": "",
[2026-02-09 14:40:03]  *** Listing of results directory ***
[2026-02-09 14:40:03] total 667156
[2026-02-09 14:40:03] -rw-r--r-- 1 boinc boinc    584627 Feb  8 18:49 pilot3.tar.gz
[2026-02-09 14:40:03] -rwx------ 1 boinc boinc     36322 Feb  8 18:53 runpilot2-wrapper.sh
[2026-02-09 14:40:03] -rw-r--r-- 1 boinc boinc      5111 Feb  8 18:56 queuedata.json
[2026-02-09 14:40:03] -rw-r--r-- 1 boinc boinc       100 Feb  9 13:17 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-09 14:40:03] -rwxr-xr-x 1 boinc boinc      7986 Feb  9 13:17 run_atlas
[2026-02-09 14:40:03] -rw-r--r-- 1 boinc boinc       105 Feb  9 13:17 job.xml
[2026-02-09 14:40:03] -rw-r--r-- 2 boinc boinc 496255539 Feb  9 13:17 EVNT.48318008._000240.pool.root.1
[2026-02-09 14:40:03] -rw-r--r-- 2 boinc boinc    597950 Feb  9 13:17 input.tar.gz
[2026-02-09 14:40:03] -rw-r--r-- 2 boinc boinc     15845 Feb  9 13:17 start_atlas.sh
[2026-02-09 14:40:03] drwxrwx--x 2 boinc boinc      4096 Feb  9 13:17 shared
[2026-02-09 14:40:03] -rw-r--r-- 1 boinc boinc         0 Feb  9 13:17 boinc_setup_complete
[2026-02-09 14:40:03] -rw-r--r-- 1 boinc boinc      6449 Feb  9 13:17 init_data.xml
[2026-02-09 14:40:03] -rw-r--r-- 1 boinc boinc         0 Feb  9 13:17 boinc_lockfile
[2026-02-09 14:40:03] -rw-r--r-- 1 boinc boinc      2528 Feb  9 13:17 pandaJob.out
[2026-02-09 14:40:03] -rw------- 1 boinc boinc   1009480 Feb  9 13:17 agis_schedconf.cvmfs.json
[2026-02-09 14:40:03] -rw------- 1 boinc boinc   1513144 Feb  9 13:17 agis_ddmendpoints.agis.ALL.json
[2026-02-09 14:40:03] -rw------- 1 boinc boinc       427 Feb  9 13:17 workernode_map.json
[2026-02-09 14:40:03] drwx------ 5 boinc boinc      4096 Feb  9 13:17 pilot3
[2026-02-09 14:40:03] -rw------- 1 boinc boinc 180960193 Feb  9 14:38 HITS.48318010._013457.pool.root.1
[2026-02-09 14:40:03] -rw-r--r-- 1 boinc boinc       530 Feb  9 14:38 boinc_task_state.xml
[2026-02-09 14:40:03] -rw------- 1 boinc boinc      1011 Feb  9 14:38 memory_monitor_summary.json
[2026-02-09 14:40:03] -rw------- 1 boinc boinc    289347 Feb  9 14:38 log.48318010._013457.job.log.tgz.1
[2026-02-09 14:40:03] -rw------- 1 boinc boinc      6304 Feb  9 14:38 heartbeat.json
[2026-02-09 14:40:03] -rw------- 1 boinc boinc        95 Feb  9 14:39 pilot_heartbeat.json
[2026-02-09 14:40:03] -rw-r--r-- 1 boinc boinc      8192 Feb  9 14:40 boinc_mmap_file
[2026-02-09 14:40:03] -rw-r--r-- 1 boinc boinc        27 Feb  9 14:40 wrapper_checkpoint.txt
[2026-02-09 14:40:03] -rw------- 1 boinc boinc      4819 Feb  9 14:40 pilotlog.txt
[2026-02-09 14:40:03] -rw------- 1 boinc boinc    713273 Feb  9 14:40 log.48318010._013457.job.log.1
[2026-02-09 14:40:03] -rw------- 1 boinc boinc       357 Feb  9 14:40 output.list
[2026-02-09 14:40:03] -rw-r--r-- 1 boinc boinc       620 Feb  9 14:40 runtime_log
[2026-02-09 14:40:03] -rw------- 1 boinc boinc   1024000 Feb  9 14:40 result.tar.gz
[2026-02-09 14:40:03] -rw-r--r-- 1 boinc boinc      8916 Feb  9 14:40 runtime_log.err
[2026-02-09 14:40:03] -rw------- 1 boinc boinc       661 Feb  9 14:40 fEKLDmK9N98nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmICeKDmC63Lxn.diag
[2026-02-09 14:40:03] -rw-r--r-- 1 boinc boinc     21514 Feb  9 14:40 stderr.txt
[2026-02-09 14:40:03] HITS file was successfully produced:
[2026-02-09 14:40:03] -rw------- 1 boinc boinc 180960193 Feb  9 14:38 shared/HITS.pool.root.1
[2026-02-09 14:40:03]  *** Contents of shared directory: ***
[2026-02-09 14:40:03] total 662956
[2026-02-09 14:40:03] -rw-r--r-- 2 boinc boinc 496255539 Feb  9 13:17 ATLAS.root_0
[2026-02-09 14:40:03] -rw-r--r-- 2 boinc boinc    597950 Feb  9 13:17 input.tar.gz
[2026-02-09 14:40:03] -rw-r--r-- 2 boinc boinc     15845 Feb  9 13:17 start_atlas.sh
[2026-02-09 14:40:03] -rw------- 1 boinc boinc 180960193 Feb  9 14:38 HITS.pool.root.1
[2026-02-09 14:40:03] -rw------- 1 boinc boinc   1024000 Feb  9 14:40 result.tar.gz
14:40:25 (509034): run_atlas exited; CPU time 13870.639056
14:40:25 (509034): called boinc_finish(0)

</stderr_txt>
]]>

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