Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
09:26:29 (3779312): wrapper (7.7.26015): starting
09:26:29 (3779312): wrapper: running run_atlas (--nthreads 2)
[2026-02-09 09:26:29] Arguments: --nthreads 2
[2026-02-09 09:26:29] Threads: 2
[2026-02-09 09:26:29] Checking for CVMFS
[2026-02-09 09:26:29] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-09 09:26:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-09 09:26:29] Running cvmfs_config stat atlas.cern.ch
[2026-02-09 09:26:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-09 09:26:30] 2.9.2.0 3340523 4533 58600 156049 0 49 29188906 36864001 0 130560 0 1308171 99.977 168535 14096 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-09 09:26:30] CVMFS is ok
[2026-02-09 09:26:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-09 09:26:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-09 09:26:30] Further information can be found at the LHC@home message board.
[2026-02-09 09:26:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-09 09:26:30] Checking for apptainer binary...
[2026-02-09 09:26:30] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-09 09:26:30] Running /usr/bin/apptainer --version
[2026-02-09 09:26:30] apptainer version 1.4.1-1.1
[2026-02-09 09:26:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-09 09:26:30] thA315
[2026-02-09 09:26:30] apptainer works
[2026-02-09 09:26:30] Set ATHENA_PROC_NUMBER=2
[2026-02-09 09:26:30] Set ATHENA_CORE_NUMBER=2
[2026-02-09 09:26:30] Starting ATLAS job with PandaID=7005745006
[2026-02-09 09:26:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-09 11:35:15]  *** The last 200 lines of the pilot log: ***
[2026-02-09 11:35:15] 2026-02-09 10:34:44,911 | INFO     | current server update state: UPDATING_FINAL
[2026-02-09 11:35:15] 2026-02-09 10:34:44,911 | INFO     | update_server=False
[2026-02-09 11:35:15] 2026-02-09 10:34:44,911 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-09 11:35:15] 2026-02-09 10:34:44,911 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-02-09 11:35:15] 2026-02-09 10:34:44,911 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-09 11:35:15] 2026-02-09 10:34:44,911 | INFO     | found 0 job(s) in 20 queues
[2026-02-09 11:35:15] 2026-02-09 10:34:44,911 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-09 11:35:15] 2026-02-09 10:34:44,911 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-09 11:35:15] 2026-02-09 10:34:45,231 | INFO     | all data control threads have been joined
[2026-02-09 11:35:15] 2026-02-09 10:34:45,725 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-09 11:35:15] 2026-02-09 10:34:45,725 | INFO     | aborting loop
[2026-02-09 11:35:15] 2026-02-09 10:34:45,844 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-09 11:35:15] 2026-02-09 10:34:45,917 | INFO     | [job] retrieve thread has finished
[2026-02-09 11:35:15] 2026-02-09 10:34:45,917 | INFO     | [job] queue monitor thread has finished
[2026-02-09 11:35:15] 2026-02-09 10:34:45,954 | INFO     | all payload control threads have been joined
[2026-02-09 11:35:15] 2026-02-09 10:34:45,969 | INFO     | [payload] execute_payloads thread has finished
[2026-02-09 11:35:15] 2026-02-09 10:34:45,981 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-09 11:35:15] 2026-02-09 10:34:46,048 | INFO     | all job control threads have been joined
[2026-02-09 11:35:15] 2026-02-09 10:34:46,236 | INFO     | [data] control thread has finished
[2026-02-09 11:35:15] 2026-02-09 10:34:46,611 | INFO     | [payload] failed_post thread has finished
[2026-02-09 11:35:15] 2026-02-09 10:34:46,731 | INFO     | [job] job monitor thread has finished
[2026-02-09 11:35:15] 2026-02-09 10:34:46,891 | INFO     | [job] validate thread has finished
[2026-02-09 11:35:15] 2026-02-09 10:34:46,960 | INFO     | [payload] control thread has finished
[2026-02-09 11:35:15] 2026-02-09 10:34:47,030 | INFO     | [payload] validate_pre thread has finished
[2026-02-09 11:35:15] 2026-02-09 10:34:47,031 | INFO     | [job] create_data_payload thread has finished
[2026-02-09 11:35:15] 2026-02-09 10:34:47,054 | INFO     | [job] control thread has finished
[2026-02-09 11:35:15] 2026-02-09 10:34:47,123 | INFO     | [data] copytool_in thread has finished
[2026-02-09 11:35:15] 2026-02-09 10:34:47,138 | INFO     | [payload] validate_post thread has finished
[2026-02-09 11:35:15] 2026-02-09 10:34:47,208 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-09 11:35:15] 2026-02-09 10:34:47,849 | INFO     | [data] copytool_out thread has finished
[2026-02-09 11:35:15] 2026-02-09 10:34:49,989 | INFO     | [data] queue_monitor thread has finished
[2026-02-09 11:35:15] 2026-02-09 10:35:09,304 | INFO     | [monitor] cgroup control has ended
[2026-02-09 11:35:15] 2026-02-09 10:35:10,252 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139823111444288)>', '<ExcThread(monitor, started 139822165378816)>']
[2026-02-09 11:35:15] 2026-02-09 10:35:11,051 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-09 11:35:15] 2026-02-09 10:35:11,052 | INFO     | [monitor] control thread has ended
[2026-02-09 11:35:15] 2026-02-09 10:35:15,278 | INFO     | all workflow threads have been joined
[2026-02-09 11:35:15] 2026-02-09 10:35:15,278 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-09 11:35:15] 2026-02-09 10:35:15,279 | INFO     | traces error code: 0
[2026-02-09 11:35:15] 2026-02-09 10:35:15,279 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-09 11:35:15] 2026-02-09 10:35:15,320 [wrapper] ==== pilot stdout END ====
[2026-02-09 11:35:15] 2026-02-09 10:35:15,323 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-09 11:35:15] 2026-02-09 10:35:15,325 [wrapper] pilotpid: 3783341
[2026-02-09 11:35:15] 2026-02-09 10:35:15,328 [wrapper] Pilot exit status: 0
[2026-02-09 11:35:15] 2026-02-09 10:35:15,334 [wrapper] pandaids: 7005745006
[2026-02-09 11:35:15] 2026-02-09 10:35:15,346 [wrapper] cleanup supervisor_pilot 3792903 3783342
[2026-02-09 11:35:15] 2026-02-09 10:35:15,348 [wrapper] Test setup, not cleaning
[2026-02-09 11:35:15] 2026-02-09 10:35:15,350 [wrapper] apfmon messages muted
[2026-02-09 11:35:15] 2026-02-09 10:35:15,352 [wrapper] ==== wrapper stdout END ====
[2026-02-09 11:35:15] 2026-02-09 10:35:15,354 [wrapper] ==== wrapper stderr END ====
[2026-02-09 11:35:15]  *** Error codes and diagnostics ***
[2026-02-09 11:35:15]     "exeErrorCode": 0,
[2026-02-09 11:35:15]     "exeErrorDiag": "",
[2026-02-09 11:35:15]     "pilotErrorCode": 0,
[2026-02-09 11:35:15]     "pilotErrorDiag": "",
[2026-02-09 11:35:15]  *** Listing of results directory ***
[2026-02-09 11:35:15] total 676032
[2026-02-09 11:35:15] -rw-r--r-- 1 boinc boinc    584627 Feb  8 18:49 pilot3.tar.gz
[2026-02-09 11:35:15] -rwx------ 1 boinc boinc     36322 Feb  8 18:50 runpilot2-wrapper.sh
[2026-02-09 11:35:15] -rw-r--r-- 1 boinc boinc      5111 Feb  8 18:51 queuedata.json
[2026-02-09 11:35:15] -rw-r--r-- 1 boinc boinc       100 Feb  9 09:26 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-09 11:35:15] -rwxr-xr-x 1 boinc boinc      7986 Feb  9 09:26 run_atlas
[2026-02-09 11:35:15] -rw-r--r-- 1 boinc boinc       105 Feb  9 09:26 job.xml
[2026-02-09 11:35:15] -rw-r--r-- 2 boinc boinc 495128973 Feb  9 09:26 EVNT.48318008._000236.pool.root.1
[2026-02-09 11:35:15] drwxrwx--x 2 boinc boinc      4096 Feb  9 09:26 shared
[2026-02-09 11:35:15] -rw-r--r-- 2 boinc boinc    597948 Feb  9 09:26 input.tar.gz
[2026-02-09 11:35:15] -rw-r--r-- 2 boinc boinc     15845 Feb  9 09:26 start_atlas.sh
[2026-02-09 11:35:15] -rw-r--r-- 1 boinc boinc         0 Feb  9 09:26 boinc_setup_complete
[2026-02-09 11:35:15] -rw-r--r-- 1 boinc boinc      6206 Feb  9 09:26 init_data.xml
[2026-02-09 11:35:15] -rw-r--r-- 1 boinc boinc         0 Feb  9 09:26 boinc_lockfile
[2026-02-09 11:35:15] -rw-r--r-- 1 boinc boinc      2526 Feb  9 09:26 pandaJob.out
[2026-02-09 11:35:15] -rw------- 1 boinc boinc   1009488 Feb  9 09:26 agis_schedconf.cvmfs.json
[2026-02-09 11:35:15] -rw------- 1 boinc boinc   1513144 Feb  9 09:26 agis_ddmendpoints.agis.ALL.json
[2026-02-09 11:35:15] -rw------- 1 boinc boinc       416 Feb  9 09:26 workernode_map.json
[2026-02-09 11:35:15] drwx------ 5 boinc boinc      4096 Feb  9 09:26 pilot3
[2026-02-09 11:35:15] -rw------- 1 boinc boinc 190471713 Feb  9 11:34 HITS.48318010._013211.pool.root.1
[2026-02-09 11:35:15] -rw-r--r-- 1 boinc boinc       530 Feb  9 11:34 boinc_task_state.xml
[2026-02-09 11:35:15] -rw------- 1 boinc boinc        95 Feb  9 11:34 pilot_heartbeat.json
[2026-02-09 11:35:15] -rw------- 1 boinc boinc      1013 Feb  9 11:34 memory_monitor_summary.json
[2026-02-09 11:35:15] -rw------- 1 boinc boinc    263788 Feb  9 11:34 log.48318010._013211.job.log.tgz.1
[2026-02-09 11:35:15] -rw------- 1 boinc boinc      6294 Feb  9 11:34 heartbeat.json
[2026-02-09 11:35:15] -rw-r--r-- 1 boinc boinc      8192 Feb  9 11:35 boinc_mmap_file
[2026-02-09 11:35:15] -rw-r--r-- 1 boinc boinc        27 Feb  9 11:35 wrapper_checkpoint.txt
[2026-02-09 11:35:15] -rw------- 1 boinc boinc      4552 Feb  9 11:35 pilotlog.txt
[2026-02-09 11:35:15] -rw------- 1 boinc boinc   1100537 Feb  9 11:35 log.48318010._013211.job.log.1
[2026-02-09 11:35:15] -rw------- 1 boinc boinc       357 Feb  9 11:35 output.list
[2026-02-09 11:35:15] -rw-r--r-- 1 boinc boinc       620 Feb  9 11:35 runtime_log
[2026-02-09 11:35:15] -rw------- 1 boinc boinc   1382400 Feb  9 11:35 result.tar.gz
[2026-02-09 11:35:15] -rw-r--r-- 1 boinc boinc      8896 Feb  9 11:35 runtime_log.err
[2026-02-09 11:35:15] -rw------- 1 boinc boinc       657 Feb  9 11:35 BNINDmj6N98nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmz4dKDm3CPIEm.diag
[2026-02-09 11:35:15] -rw-r--r-- 1 boinc boinc      7441 Feb  9 11:35 stderr.txt
[2026-02-09 11:35:15] HITS file was successfully produced:
[2026-02-09 11:35:15] -rw------- 1 boinc boinc 190471713 Feb  9 11:34 shared/HITS.pool.root.1
[2026-02-09 11:35:15]  *** Contents of shared directory: ***
[2026-02-09 11:35:15] total 671496
[2026-02-09 11:35:15] -rw-r--r-- 2 boinc boinc 495128973 Feb  9 09:26 ATLAS.root_0
[2026-02-09 11:35:15] -rw-r--r-- 2 boinc boinc    597948 Feb  9 09:26 input.tar.gz
[2026-02-09 11:35:15] -rw-r--r-- 2 boinc boinc     15845 Feb  9 09:26 start_atlas.sh
[2026-02-09 11:35:15] -rw------- 1 boinc boinc 190471713 Feb  9 11:34 HITS.pool.root.1
[2026-02-09 11:35:15] -rw------- 1 boinc boinc   1382400 Feb  9 11:35 result.tar.gz
11:35:16 (3779312): run_atlas exited; CPU time 14923.093607
11:35:16 (3779312): called boinc_finish(0)

</stderr_txt>
]]>

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