Stderr output

<core_client_version>7.16.5</core_client_version>
<![CDATA[
<stderr_txt>
2026-02-09 13:52:45 (5880): vboxwrapper version 26210
2026-02-09 13:52:45 (5880): BOINC client version: 7.16.5
2026-02-09 13:52:45 (5880): Detected: VirtualBox VboxManage Interface (Version: 5.2.44)
2026-02-09 13:52:46 (5880): Successfully copied 'init_data.xml' to the shared directory.
2026-02-09 13:52:46 (5880): Create VM. (boinc_0e60ece2f5199227, slot#5)
2026-02-09 13:52:46 (5880): Setting Memory Size for VM. (4400MB)
2026-02-09 13:52:47 (5880): Setting CPU Count for VM. (4)
2026-02-09 13:52:47 (5880): Setting Chipset Options for VM.
2026-02-09 13:52:47 (5880): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-02-09 13:52:47 (5880): Setting Boot Options for VM.
2026-02-09 13:52:48 (5880): Setting Network Configuration for NAT. (Driver: virtio)
2026-02-09 13:52:48 (5880): Enabling VM Network Access.
2026-02-09 13:52:49 (5880): Disabling USB Support for VM.
2026-02-09 13:52:49 (5880): Disabling COM Port Support for VM.
2026-02-09 13:52:49 (5880): Disabling LPT Port Support for VM.
2026-02-09 13:52:49 (5880): Disabling Audio Support for VM.
2026-02-09 13:52:50 (5880): Disabling Clipboard Support for VM.
2026-02-09 13:52:50 (5880): Disabling Drag and Drop Support for VM.
2026-02-09 13:52:50 (5880): Adding storage controller(s) to VM.
2026-02-09 13:52:50 (5880): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-02-09 13:52:51 (5880): Adding VirtualBox Guest Additions to VM.
2026-02-09 13:52:51 (5880): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-02-09 13:52:51 (5880): forwarding host port 51066 to guest port 80
2026-02-09 13:52:52 (5880): Enabling remote desktop for VM.
2026-02-09 13:52:52 (5880): Enabling shared directory for VM.
2026-02-09 13:52:53 (5880): Starting VM using VBoxManage interface. (boinc_0e60ece2f5199227, slot#5)
2026-02-09 13:52:57 (5880): Successfully started VM. (PID = '7096')
2026-02-09 13:52:57 (5880): Reporting VM Process ID to BOINC.
2026-02-09 13:52:57 (5880): Guest Log: BIOS: VirtualBox 5.2.44
2026-02-09 13:52:57 (5880): Guest Log: CPUID EDX: 0x178bfbff
2026-02-09 13:52:57 (5880): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-02-09 13:52:57 (5880): VM state change detected. (old = 'poweredoff', new = 'running')
2026-02-09 13:52:57 (5880): Detected: Web Application Enabled (http://localhost:51066)
2026-02-09 13:52:57 (5880): Detected: Remote Desktop Enabled (localhost:51067)
2026-02-09 13:52:57 (5880): Preference change detected
2026-02-09 13:52:57 (5880): Setting CPU throttle for VM. (100%)
2026-02-09 13:52:57 (5880): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 120 seconds) or (Vbox_job.xml: 900 seconds))
2026-02-09 13:52:59 (5880): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-02-09 13:52:59 (5880): Guest Log: BIOS: Booting from Hard Disk...
2026-02-09 13:53:02 (5880): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-02-09 13:53:02 (5880): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-02-09 13:53:02 (5880): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-02-09 13:53:02 (5880): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-02-09 13:53:02 (5880): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-02-09 13:53:02 (5880): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-02-09 13:53:02 (5880): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-02-09 13:53:02 (5880): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-02-09 13:53:02 (5880): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-02-09 13:53:02 (5880): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-02-09 13:53:02 (5880): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-02-09 13:53:02 (5880): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-02-09 13:53:02 (5880): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-02-09 13:53:02 (5880): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-02-09 13:53:02 (5880): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-02-09 13:53:02 (5880): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-02-09 13:53:02 (5880): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-02-09 13:53:02 (5880): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-02-09 13:53:02 (5880): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-02-09 13:53:02 (5880): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-02-09 13:53:02 (5880): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-02-09 13:53:02 (5880): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-02-09 13:53:02 (5880): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-02-09 13:53:02 (5880): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-02-09 13:53:02 (5880): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-02-09 13:53:02 (5880): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-02-09 13:53:02 (5880): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-02-09 13:53:02 (5880): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-02-09 13:53:02 (5880): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-02-09 13:53:02 (5880): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-02-09 13:53:02 (5880): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-02-09 13:53:02 (5880): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-02-09 13:53:07 (5880): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-02-09 13:53:07 (5880): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2026-02-09 13:53:13 (5880): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-02-09 13:53:13 (5880): Guest Log: 00:00:00.000167 main     Log opened 2026-02-09T13:53:11.323438000Z
2026-02-09 13:53:13 (5880): Guest Log: 00:00:00.000305 main     OS Product: Linux
2026-02-09 13:53:13 (5880): Guest Log: 00:00:00.000339 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-02-09 13:53:13 (5880): Guest Log: 00:00:00.000367 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-02-09 13:53:13 (5880): Guest Log: 00:00:00.000400 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-02-09 13:53:13 (5880): Guest Log: 00:00:00.000401 main     Process ID: 1308
2026-02-09 13:53:13 (5880): Guest Log: 00:00:00.000402 main     Package type: LINUX_64BITS_GENERIC
2026-02-09 13:53:13 (5880): Guest Log: 00:00:00.001519 main     5.2.32 r132073 started. Verbose level = 0
2026-02-09 13:53:13 (5880): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-02-09 13:53:13 (5880): Guest Log: [INFO] Mounting shared directory
2026-02-09 13:53:13 (5880): Guest Log: [INFO] Checking for init_data.xml
2026-02-09 13:53:19 (5880): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-02-09 13:53:19 (5880): Guest Log: [INFO] Detected branch: prod
2026-02-09 13:53:19 (5880): Guest Log: This is the prod version of the ATLAS job wrapper
2026-02-09 13:53:19 (5880): Guest Log: Copying input files
2026-02-09 13:53:23 (5880): Guest Log: 00:00:10.005246 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 381 824 000ns (GuestNow=1 770 638 002 944 321 000 ns GuestLast=1 770 645 191 326 145 000 ns fSetTimeLastLoop=true )
2026-02-09 13:53:24 (5880): Guest Log: Copied input files into RunAtlas.
2026-02-09 13:53:24 (5880): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-02-09 13:53:24 (5880): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-02-09 13:53:24 (5880): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-02-09 13:53:24 (5880): Guest Log: Further information can be found at the LHC@home message board.
2026-02-09 13:53:34 (5880): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-02-09 13:53:34 (5880): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-02-09 13:53:34 (5880): Guest Log: 2.6.3.0 1585 0 30156 156054 4 1 3117739 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-02-09 13:53:37 (5880): Guest Log: copied the webapp to /var/www
2026-02-09 13:53:37 (5880): Guest Log: ATHENA_PROC_NUMBER=4
2026-02-09 13:53:37 (5880): Guest Log: ATHENA_CORE_NUMBER=4
2026-02-09 13:53:37 (5880): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-02-09 13:53:37 (5880): Guest Log:  *** Starting ATLAS job. (PandaID=7008293666 taskID=48431096) ***
2026-02-09 14:55:02 (5880): Preference change detected
2026-02-09 14:55:02 (5880): Setting CPU throttle for VM. (100%)
2026-02-09 14:55:02 (5880): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 120 seconds) or (Vbox_job.xml: 900 seconds))
2026-02-09 15:33:00 (5880): Status Report: Elapsed Time: '6000.000000'
2026-02-09 15:33:00 (5880): Status Report: CPU Time: '20352.078125'
2026-02-09 16:30:02 (5880): VM state change detected. (old = 'running', new = 'paused')
2026-02-09 19:30:01 (5880): VM state change detected. (old = 'paused', new = 'running')
2026-02-09 19:30:06 (5880): Guest Log: 02:36:54.033728 timesync vgsvcTimeSyncWorker: Radical host time change: 10 809 332 000 000ns (HostNow=1 770 658 206 303 000 000 ns HostLast=1 770 647 396 971 000 000 ns)
2026-02-09 19:30:16 (5880): Guest Log: 02:37:04.034769 timesync vgsvcTimeSyncWorker: Radical guest time change: 10 809 331 709 000ns (GuestNow=1 770 658 216 304 119 000 ns GuestLast=1 770 647 406 972 410 000 ns fSetTimeLastLoop=true )
2026-02-09 20:13:03 (5880): Status Report: Elapsed Time: '12000.000000'
2026-02-09 20:13:03 (5880): Status Report: CPU Time: '43919.937500'
2026-02-09 21:45:00 (5880): Guest Log:  *** Job finished ***
2026-02-09 21:45:00 (5880): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-02-09 21:45:00 (5880): Guest Log: 2026-02-09 19:44:40,428 | INFO     | job.realtimelogging is not enabled
2026-02-09 21:45:00 (5880): Guest Log: 2026-02-09 19:44:41,451 | INFO     | [payload] run_realtimelog thread has finished
2026-02-09 21:45:00 (5880): Guest Log: 2026-02-09 19:44:49,996 | INFO     | [monitor] cgroup control has ended
2026-02-09 21:45:00 (5880): Guest Log: 2026-02-09 19:44:51,749 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139971735553856)>', '<ExcThread(monitor, started 139971155449600)>']
2026-02-09 21:45:00 (5880): Guest Log: 2026-02-09 19:44:52,196 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-02-09 21:45:00 (5880): Guest Log: 2026-02-09 19:44:52,196 | INFO     | [monitor] control thread has ended
2026-02-09 21:45:00 (5880): Guest Log: 2026-02-09 19:44:56,753 | INFO     | all workflow threads have been joined
2026-02-09 21:45:00 (5880): Guest Log: 2026-02-09 19:44:56,753 | INFO     | end of generic workflow (traces error code: 0)
2026-02-09 21:45:00 (5880): Guest Log: 2026-02-09 19:44:56,753 | INFO     | traces error code: 0
2026-02-09 21:45:00 (5880): Guest Log: 2026-02-09 19:44:56,753 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-02-09 21:45:00 (5880): Guest Log: 2026-02-09 19:44:56,867 [wrapper] ==== pilot stdout END ====
2026-02-09 21:45:00 (5880): Guest Log: 2026-02-09 19:44:56,872 [wrapper] ==== wrapper stdout RESUME ====
2026-02-09 21:45:00 (5880): Guest Log: 2026-02-09 19:44:56,877 [wrapper] pilotpid: 5988
2026-02-09 21:45:00 (5880): Guest Log: 2026-02-09 19:44:56,882 [wrapper] Pilot exit status: 0
2026-02-09 21:45:00 (5880): Guest Log: 2026-02-09 19:44:56,935 [wrapper] pandaids: 7008293666
2026-02-09 21:45:00 (5880): Guest Log: 2026-02-09 19:44:56,976 [wrapper] cleanup supervisor_pilot  7436 5989
2026-02-09 21:45:00 (5880): Guest Log: 2026-02-09 19:44:56,982 [wrapper] Test setup, not cleaning
2026-02-09 21:45:00 (5880): Guest Log: 2026-02-09 19:44:56,987 [wrapper] apfmon messages muted
2026-02-09 21:45:00 (5880): Guest Log: 2026-02-09 19:44:56,992 [wrapper] ==== wrapper stdout END ====
2026-02-09 21:45:00 (5880): Guest Log: 2026-02-09 19:44:56,997 [wrapper] ==== wrapper stderr END ====
2026-02-09 21:45:00 (5880): Guest Log:  *** Error codes and diagnostics ***
2026-02-09 21:45:00 (5880): Guest Log:     "exeErrorCode": 0,
2026-02-09 21:45:00 (5880): Guest Log:     "exeErrorDiag": "",
2026-02-09 21:45:00 (5880): Guest Log:     "pilotErrorCode": 0,
2026-02-09 21:45:00 (5880): Guest Log:     "pilotErrorDiag": "",
2026-02-09 21:45:00 (5880): Guest Log:  *** Listing of results directory ***
2026-02-09 21:45:00 (5880): Guest Log: total 284256
2026-02-09 21:45:00 (5880): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Feb  8 21:52 queuedata.json
2026-02-09 21:45:00 (5880): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Feb  8 21:52 pilot3.tar.gz
2026-02-09 21:45:00 (5880): Guest Log: -rwx------. 1 atlas atlas     36322 Feb  8 21:52 runpilot2-wrapper.sh
2026-02-09 21:45:00 (5880): Guest Log: -rwxr-xr-x. 1 atlas atlas      8897 Feb  9 11:53 init_data.xml
2026-02-09 21:45:00 (5880): Guest Log: -rwxr-xr-x. 1 atlas atlas    597962 Feb  9 11:53 input.tar.gz
2026-02-09 21:45:00 (5880): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Feb  9 11:53 start_atlas.sh
2026-02-09 21:45:00 (5880): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb  9 11:53 EVNT.48431094._000585.pool.root.1 -> /data/./ATLAS.root_0
2026-02-09 21:45:00 (5880): Guest Log: -rw-r--r--. 1 atlas atlas      2556 Feb  9 11:53 pandaJob.out
2026-02-09 21:45:00 (5880): Guest Log: -rw-------. 1 atlas atlas   1009480 Feb  9 11:54 agis_schedconf.cvmfs.json
2026-02-09 21:45:00 (5880): Guest Log: -rw-------. 1 atlas atlas       426 Feb  9 11:54 workernode_map.json
2026-02-09 21:45:00 (5880): Guest Log: drwx------. 5 atlas atlas      4096 Feb  9 11:54 pilot3
2026-02-09 21:45:00 (5880): Guest Log: -rw-------. 1 atlas atlas 281429834 Feb  9 19:43 HITS.48431096._012417.pool.root.1
2026-02-09 21:45:00 (5880): Guest Log: -rw-------. 1 atlas atlas        98 Feb  9 19:44 pilot_heartbeat.json
2026-02-09 21:45:00 (5880): Guest Log: -rw-------. 1 atlas atlas      1044 Feb  9 19:44 memory_monitor_summary.json
2026-02-09 21:45:00 (5880): Guest Log: -rw-------. 1 atlas atlas   1513144 Feb  9 19:44 agis_ddmendpoints.agis.ALL.json
2026-02-09 21:45:00 (5880): Guest Log: -rw-------. 1 atlas atlas    462546 Feb  9 19:44 log.48431096._012417.job.log.tgz.1
2026-02-09 21:45:00 (5880): Guest Log: -rw-------. 1 atlas atlas      6377 Feb  9 19:44 heartbeat.json
2026-02-09 21:45:00 (5880): Guest Log: -rw-------. 1 atlas atlas      4680 Feb  9 19:44 pilotlog.txt
2026-02-09 21:45:00 (5880): Guest Log: -rw-------. 1 atlas atlas   2428717 Feb  9 19:44 log.48431096._012417.job.log.1
2026-02-09 21:45:00 (5880): Guest Log: -rw-------. 1 atlas atlas       357 Feb  9 19:44 output.list
2026-02-09 21:45:00 (5880): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb  9 19:44 runtime_log
2026-02-09 21:45:00 (5880): Guest Log: -rw-------. 1 atlas atlas   2908160 Feb  9 19:44 result.tar.gz
2026-02-09 21:45:00 (5880): Guest Log: -rw-r--r--. 1 atlas atlas      8788 Feb  9 19:44 runtime_log.err
2026-02-09 21:45:00 (5880): Guest Log: -rw-------. 1 atlas atlas       670 Feb  9 19:44 7aoLDmJtR98nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmmReKDmVz1Pzm.diag
2026-02-09 21:45:00 (5880): Guest Log: Looking for outputfile HITS.48431096._012417.pool.root.1
2026-02-09 21:45:00 (5880): Guest Log: HITS file was successfully produced
2026-02-09 21:45:00 (5880): Guest Log: -rw-------. 1 atlas atlas 281429834 Feb  9 19:43 /home/atlas/RunAtlas/HITS.48431096._012417.pool.root.1
2026-02-09 21:45:02 (5880): Guest Log: Successfully finished the ATLAS job!
2026-02-09 21:45:02 (5880): Guest Log: Copying the results back to the shared directory!
2026-02-09 21:45:02 (5880): Guest Log:  *** Contents of shared directory: ***
2026-02-09 21:45:02 (5880): Guest Log: total 934720
2026-02-09 21:45:02 (5880): Guest Log: -rwxrwxrwx. 1 root root 672185172 Feb  9 11:52 ATLAS.root_0
2026-02-09 21:45:02 (5880): Guest Log: -rwxrwxrwx. 1 root root 281429834 Feb  9 19:45 HITS.pool.root.1
2026-02-09 21:45:02 (5880): Guest Log: -rwxrwxrwx. 1 root root      8897 Feb  9 11:52 init_data.xml
2026-02-09 21:45:02 (5880): Guest Log: -rwxrwxrwx. 1 root root    597962 Feb  9 01:52 input.tar.gz
2026-02-09 21:45:02 (5880): Guest Log: -rwxrwxrwx. 1 root root   2908160 Feb  9 19:45 result.tar.gz
2026-02-09 21:45:02 (5880): Guest Log: -rwxrwxrwx. 1 root root     15845 Feb  9 01:52 start_atlas.sh
2026-02-09 21:45:02 (5880): Guest Log:  *** Success! Shutting down the machine. ***
2026-02-09 21:45:02 (5880): VM Completion File Detected.
2026-02-09 21:45:02 (5880): Powering off VM.
2026-02-09 21:45:03 (5880): Successfully stopped VM.
2026-02-09 21:45:03 (5880): Deregistering VM. (boinc_0e60ece2f5199227, slot#5)
2026-02-09 21:45:03 (5880): Removing network bandwidth throttle group from VM.
2026-02-09 21:45:03 (5880): Removing VM from VirtualBox.
2026-02-09 21:45:08 (5880): called boinc_finish(0)

</stderr_txt>
]]>

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