Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-02-08 20:43:42 (58933): vboxwrapper version 26210
2026-02-08 20:43:42 (58933): BOINC client version: 8.2.8
2026-02-08 20:43:42 (58933): Detected: VirtualBox VboxManage Interface (Version: 6.1.50)
2026-02-08 20:43:42 (58933): Detected: Sandbox Configuration Enabled
2026-02-08 20:43:42 (58933): Successfully copied 'init_data.xml' to the shared directory.
2026-02-08 20:43:42 (58933): Create VM. (boinc_bfdff0126132c407, slot#1)
2026-02-08 20:43:42 (58933): Setting Memory Size for VM. (4400MB)
2026-02-08 20:43:42 (58933): Setting CPU Count for VM. (4)
2026-02-08 20:43:42 (58933): Setting Chipset Options for VM.
2026-02-08 20:43:43 (58933): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-02-08 20:43:43 (58933): Setting Boot Options for VM.
2026-02-08 20:43:43 (58933): Setting Network Configuration for NAT. (Driver: virtio)
2026-02-08 20:43:43 (58933): Enabling VM Network Access.
2026-02-08 20:43:43 (58933): Disabling USB Support for VM.
2026-02-08 20:43:43 (58933): Disabling COM Port Support for VM.
2026-02-08 20:43:43 (58933): Disabling Audio Support for VM.
2026-02-08 20:43:43 (58933): Disabling Clipboard Support for VM.
2026-02-08 20:43:43 (58933): Disabling Drag and Drop Support for VM.
2026-02-08 20:43:43 (58933): Adding storage controller(s) to VM.
2026-02-08 20:43:43 (58933): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-02-08 20:43:44 (58933): Adding VirtualBox Guest Additions to VM.
2026-02-08 20:43:44 (58933): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-02-08 20:43:44 (58933): forwarding host port 52819 to guest port 80
2026-02-08 20:43:44 (58933): Enabling remote desktop for VM.
2026-02-08 20:43:44 (58933): Required extension pack not installed, remote desktop not enabled.
2026-02-08 20:43:44 (58933): Enabling shared directory for VM.
2026-02-08 20:43:44 (58933): Starting VM using VBoxManage interface. (boinc_bfdff0126132c407, slot#1)
2026-02-08 20:43:46 (58933): Successfully started VM. (PID = '58992')
2026-02-08 20:43:46 (58933): Reporting VM Process ID to BOINC.
2026-02-08 20:43:46 (58933): Guest Log: BIOS: VirtualBox 6.1.50
2026-02-08 20:43:46 (58933): Guest Log: CPUID EDX: 0x178bfbff
2026-02-08 20:43:46 (58933): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-02-08 20:43:46 (58933): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-02-08 20:43:46 (58933): VM state change detected. (old = 'poweredoff', new = 'running')
2026-02-08 20:43:46 (58933): Detected: Web Application Enabled (http://localhost:52819)
2026-02-08 20:43:46 (58933): Preference change detected
2026-02-08 20:43:46 (58933): Setting CPU throttle for VM. (100%)
2026-02-08 20:43:46 (58933): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2026-02-08 20:43:48 (58933): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-02-08 20:43:48 (58933): Guest Log: BIOS: Booting from Hard Disk...
2026-02-08 20:43:51 (58933): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-02-08 20:43:51 (58933): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-02-08 20:43:51 (58933): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-02-08 20:43:51 (58933): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-02-08 20:43:51 (58933): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-02-08 20:43:51 (58933): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-02-08 20:43:51 (58933): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-02-08 20:43:51 (58933): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-02-08 20:43:51 (58933): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-02-08 20:43:51 (58933): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-02-08 20:43:51 (58933): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-02-08 20:43:51 (58933): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-02-08 20:43:51 (58933): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-02-08 20:43:51 (58933): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-02-08 20:43:51 (58933): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-02-08 20:43:51 (58933): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-02-08 20:43:51 (58933): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-02-08 20:43:51 (58933): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-02-08 20:43:51 (58933): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-02-08 20:43:51 (58933): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-02-08 20:43:51 (58933): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-02-08 20:43:51 (58933): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-02-08 20:43:51 (58933): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-02-08 20:43:51 (58933): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-02-08 20:43:51 (58933): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-02-08 20:43:51 (58933): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-02-08 20:43:51 (58933): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-02-08 20:43:51 (58933): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-02-08 20:43:51 (58933): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-02-08 20:43:51 (58933): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-02-08 20:43:51 (58933): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-02-08 20:43:51 (58933): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-02-08 20:44:01 (58933): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-02-08 20:44:01 (58933): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2026-02-08 20:44:26 (58933): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-02-08 20:44:26 (58933): Guest Log: 00:00:00.000185 main     Log opened 2026-02-09T01:44:25.196186000Z
2026-02-08 20:44:26 (58933): Guest Log: 00:00:00.000376 main     OS Product: Linux
2026-02-08 20:44:26 (58933): Guest Log: 00:00:00.000440 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-02-08 20:44:26 (58933): Guest Log: 00:00:00.000497 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-02-08 20:44:26 (58933): Guest Log: 00:00:00.000553 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-02-08 20:44:26 (58933): Guest Log: 00:00:00.000554 main     Process ID: 1304
2026-02-08 20:44:26 (58933): Guest Log: 00:00:00.000554 main     Package type: LINUX_64BITS_GENERIC
2026-02-08 20:44:26 (58933): Guest Log: 00:00:00.002334 main     5.2.32 r132073 started. Verbose level = 0
2026-02-08 20:44:27 (58933): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-02-08 20:44:27 (58933): Guest Log: [INFO] Mounting shared directory
2026-02-08 20:44:27 (58933): Guest Log: [INFO] Checking for init_data.xml
2026-02-08 20:44:39 (58933): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-02-08 20:44:39 (58933): Guest Log: [INFO] Detected branch: prod
2026-02-08 20:44:39 (58933): Guest Log: This is the prod version of the ATLAS job wrapper
2026-02-08 20:44:39 (58933): Guest Log: Copying input files
2026-02-08 20:45:40 (58933): Guest Log: Copied input files into RunAtlas.
2026-02-08 20:45:40 (58933): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-02-08 20:45:40 (58933): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-02-08 20:45:40 (58933): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-02-08 20:45:40 (58933): Guest Log: Further information can be found at the LHC@home message board.
2026-02-08 20:46:06 (58933): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-02-08 20:46:08 (58933): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-02-08 20:46:08 (58933): Guest Log: 2.6.3.0 1584 1 30168 156039 3 1 3117739 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-02-08 20:46:18 (58933): Guest Log: copied the webapp to /var/www
2026-02-08 20:46:18 (58933): Guest Log: ATHENA_PROC_NUMBER=4
2026-02-08 20:46:18 (58933): Guest Log: ATHENA_CORE_NUMBER=4
2026-02-08 20:46:18 (58933): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-02-08 20:46:18 (58933): Guest Log:  *** Starting ATLAS job. (PandaID=7008293010 taskID=48431096) ***
2026-02-08 22:23:46 (58933): Status Report: Elapsed Time: '6000.000000'
2026-02-08 22:23:46 (58933): Status Report: CPU Time: '11214.530000'
2026-02-08 22:52:07 (58933): Preference change detected
2026-02-08 22:52:07 (58933): Setting CPU throttle for VM. (100%)
2026-02-08 22:52:07 (58933): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2026-02-09 00:03:46 (58933): Status Report: Elapsed Time: '12000.000000'
2026-02-09 00:03:46 (58933): Status Report: CPU Time: '23579.960000'
2026-02-09 01:43:46 (58933): Status Report: Elapsed Time: '18000.000000'
2026-02-09 01:43:46 (58933): Status Report: CPU Time: '35941.590000'
2026-02-09 03:23:46 (58933): Status Report: Elapsed Time: '24000.000000'
2026-02-09 03:23:46 (58933): Status Report: CPU Time: '48339.170000'
2026-02-09 05:03:45 (58933): Status Report: Elapsed Time: '30000.000000'
2026-02-09 05:03:45 (58933): Status Report: CPU Time: '60694.070000'
2026-02-09 06:43:45 (58933): Status Report: Elapsed Time: '36000.000000'
2026-02-09 06:43:45 (58933): Status Report: CPU Time: '73066.300000'
2026-02-09 08:23:45 (58933): Status Report: Elapsed Time: '42000.000000'
2026-02-09 08:23:45 (58933): Status Report: CPU Time: '85362.530000'
2026-02-09 10:03:45 (58933): Status Report: Elapsed Time: '48000.000000'
2026-02-09 10:03:45 (58933): Status Report: CPU Time: '97736.410000'
2026-02-09 11:43:45 (58933): Status Report: Elapsed Time: '54000.000000'
2026-02-09 11:43:45 (58933): Status Report: CPU Time: '110018.250000'
2026-02-09 13:23:45 (58933): Status Report: Elapsed Time: '60000.000000'
2026-02-09 13:23:45 (58933): Status Report: CPU Time: '122374.580000'
2026-02-09 13:35:11 (58933): Guest Log:  *** Job finished ***
2026-02-09 13:35:11 (58933): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-02-09 13:35:11 (58933): Guest Log: 2026-02-09 18:34:40,789 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-02-09 13:35:11 (58933): Guest Log: 2026-02-09 18:34:50,391 [wrapper] supervise_pilot (15 min periods counter: 68)
2026-02-09 13:35:11 (58933): Guest Log: 2026-02-09 18:35:02,442 | INFO     | [monitor] cgroup control has ended
2026-02-09 13:35:11 (58933): Guest Log: 2026-02-09 18:35:05,005 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140596146087744)>', '<ExcThread(monitor, started 140595452425984)>']
2026-02-09 13:35:11 (58933): Guest Log: 2026-02-09 18:35:05,598 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-02-09 13:35:11 (58933): Guest Log: 2026-02-09 18:35:05,599 | INFO     | [monitor] control thread has ended
2026-02-09 13:35:11 (58933): Guest Log: 2026-02-09 18:35:10,010 | INFO     | all workflow threads have been joined
2026-02-09 13:35:11 (58933): Guest Log: 2026-02-09 18:35:10,011 | INFO     | end of generic workflow (traces error code: 0)
2026-02-09 13:35:11 (58933): Guest Log: 2026-02-09 18:35:10,011 | INFO     | traces error code: 0
2026-02-09 13:35:11 (58933): Guest Log: 2026-02-09 18:35:10,011 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-02-09 13:35:11 (58933): Guest Log: 2026-02-09 18:35:10,202 [wrapper] ==== pilot stdout END ====
2026-02-09 13:35:11 (58933): Guest Log: 2026-02-09 18:35:10,212 [wrapper] ==== wrapper stdout RESUME ====
2026-02-09 13:35:11 (58933): Guest Log: 2026-02-09 18:35:10,220 [wrapper] pilotpid: 6018
2026-02-09 13:35:11 (58933): Guest Log: 2026-02-09 18:35:10,229 [wrapper] Pilot exit status: 0
2026-02-09 13:35:11 (58933): Guest Log: 2026-02-09 18:35:10,315 [wrapper] pandaids: 7008293010
2026-02-09 13:35:11 (58933): Guest Log: 2026-02-09 18:35:10,373 [wrapper] cleanup supervisor_pilot 10625 6019
2026-02-09 13:35:11 (58933): Guest Log: 2026-02-09 18:35:10,384 [wrapper] Test setup, not cleaning
2026-02-09 13:35:11 (58933): Guest Log: 2026-02-09 18:35:10,391 [wrapper] apfmon messages muted
2026-02-09 13:35:11 (58933): Guest Log: 2026-02-09 18:35:10,399 [wrapper] ==== wrapper stdout END ====
2026-02-09 13:35:11 (58933): Guest Log: 2026-02-09 18:35:10,408 [wrapper] ==== wrapper stderr END ====
2026-02-09 13:35:11 (58933): Guest Log:  *** Error codes and diagnostics ***
2026-02-09 13:35:11 (58933): Guest Log:     "exeErrorCode": 0,
2026-02-09 13:35:11 (58933): Guest Log:     "exeErrorDiag": "",
2026-02-09 13:35:11 (58933): Guest Log:     "pilotErrorCode": 0,
2026-02-09 13:35:11 (58933): Guest Log:     "pilotErrorDiag": "",
2026-02-09 13:35:11 (58933): Guest Log:  *** Listing of results directory ***
2026-02-09 13:35:11 (58933): Guest Log: total 289256
2026-02-09 13:35:11 (58933): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Feb  8 21:52 queuedata.json
2026-02-09 13:35:11 (58933): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Feb  8 21:52 pilot3.tar.gz
2026-02-09 13:35:11 (58933): Guest Log: -rwx------. 1 atlas atlas     36322 Feb  8 21:52 runpilot2-wrapper.sh
2026-02-09 13:35:11 (58933): Guest Log: -rw-r-----. 1 atlas atlas     15845 Feb  9 01:44 start_atlas.sh
2026-02-09 13:35:11 (58933): Guest Log: -rw-r-----. 1 atlas atlas    597955 Feb  9 01:44 input.tar.gz
2026-02-09 13:35:11 (58933): Guest Log: -rw-r--r--. 1 atlas atlas      5622 Feb  9 01:44 init_data.xml
2026-02-09 13:35:11 (58933): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb  9 01:45 EVNT.48431094._000579.pool.root.1 -> /data/./ATLAS.root_0
2026-02-09 13:35:11 (58933): Guest Log: -rw-r--r--. 1 atlas atlas      2555 Feb  9 01:46 pandaJob.out
2026-02-09 13:35:11 (58933): Guest Log: -rw-------. 1 atlas atlas   1009504 Feb  9 01:47 agis_schedconf.cvmfs.json
2026-02-09 13:35:11 (58933): Guest Log: -rw-------. 1 atlas atlas       427 Feb  9 01:47 workernode_map.json
2026-02-09 13:35:11 (58933): Guest Log: drwx------. 5 atlas atlas      4096 Feb  9 01:47 pilot3
2026-02-09 13:35:11 (58933): Guest Log: -rw-------. 1 atlas atlas 274263246 Feb  9 18:33 HITS.48431096._012110.pool.root.1
2026-02-09 13:35:11 (58933): Guest Log: -rw-------. 1 atlas atlas      1030 Feb  9 18:33 memory_monitor_summary.json
2026-02-09 13:35:11 (58933): Guest Log: -rw-------. 1 atlas atlas   1513144 Feb  9 18:34 agis_ddmendpoints.agis.ALL.json
2026-02-09 13:35:11 (58933): Guest Log: -rw-------. 1 atlas atlas   1017861 Feb  9 18:34 log.48431096._012110.job.log.tgz.1
2026-02-09 13:35:11 (58933): Guest Log: -rw-------. 1 atlas atlas      6384 Feb  9 18:34 heartbeat.json
2026-02-09 13:35:11 (58933): Guest Log: -rw-------. 1 atlas atlas        95 Feb  9 18:34 pilot_heartbeat.json
2026-02-09 13:35:11 (58933): Guest Log: -rw-------. 1 atlas atlas      4801 Feb  9 18:35 pilotlog.txt
2026-02-09 13:35:11 (58933): Guest Log: -rw-------. 1 atlas atlas   8012908 Feb  9 18:35 log.48431096._012110.job.log.1
2026-02-09 13:35:11 (58933): Guest Log: -rw-------. 1 atlas atlas       357 Feb  9 18:35 output.list
2026-02-09 13:35:11 (58933): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb  9 18:35 runtime_log
2026-02-09 13:35:11 (58933): Guest Log: -rw-------. 1 atlas atlas   9052160 Feb  9 18:35 result.tar.gz
2026-02-09 13:35:11 (58933): Guest Log: -rw-r--r--. 1 atlas atlas      8824 Feb  9 18:35 runtime_log.err
2026-02-09 13:35:11 (58933): Guest Log: -rw-------. 1 atlas atlas       685 Feb  9 18:35 EK1NDm7sR98nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmEReKDmu2hkmn.diag
2026-02-09 13:35:11 (58933): Guest Log: Looking for outputfile HITS.48431096._012110.pool.root.1
2026-02-09 13:35:11 (58933): Guest Log: HITS file was successfully produced
2026-02-09 13:35:11 (58933): Guest Log: -rw-------. 1 atlas atlas 274263246 Feb  9 18:33 /home/atlas/RunAtlas/HITS.48431096._012110.pool.root.1
2026-02-09 13:35:12 (58933): Guest Log: Successfully finished the ATLAS job!
2026-02-09 13:35:12 (58933): Guest Log: Copying the results back to the shared directory!
2026-02-09 13:35:12 (58933): Guest Log:  *** Contents of shared directory: ***
2026-02-09 13:35:12 (58933): Guest Log: total 684268
2026-02-09 13:35:12 (58933): Guest Log: -rw-rw----. 1 root root 682326367 Feb  9 01:43 ATLAS.root_0
2026-02-09 13:35:12 (58933): Guest Log: -rw-rw-r--. 1 root root      5622 Feb  9 01:43 init_data.xml
2026-02-09 13:35:12 (58933): Guest Log: -rw-rw----. 1 root root    597955 Feb  9 01:43 input.tar.gz
2026-02-09 13:35:12 (58933): Guest Log: -rw-r--r--. 1 root root   9052160 Feb  9 18:35 result.tar.gz
2026-02-09 13:35:12 (58933): Guest Log: -rw-rw----. 1 root root     15845 Feb  9 01:43 start_atlas.sh
2026-02-09 13:35:12 (58933): Guest Log:  *** Success! Shutting down the machine. ***
2026-02-09 13:35:12 (58933): VM Completion File Detected.
2026-02-09 13:35:12 (58933): Powering off VM.
2026-02-09 13:35:13 (58933): Successfully stopped VM.
2026-02-09 13:35:13 (58933): Deregistering VM. (boinc_bfdff0126132c407, slot#1)
2026-02-09 13:35:14 (58933): Removing network bandwidth throttle group from VM.
2026-02-09 13:35:14 (58933): Removing VM from VirtualBox.
2026-02-09 13:35:19 (58933): called boinc_finish(0)

</stderr_txt>
]]>

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