Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2026-02-08 22:19:48 (12232): vboxwrapper version 26210
2026-02-08 22:19:48 (12232): BOINC client version: 8.2.4
2026-02-08 22:19:48 (12232): Detected: VirtualBox VboxManage Interface (Version: 7.1.4)
2026-02-08 22:19:49 (12232): Successfully copied 'init_data.xml' to the shared directory.
2026-02-08 22:19:49 (12232): Create VM. (boinc_c39b3b7a3c8b7b9b, slot#2)
2026-02-08 22:19:49 (12232): Setting Memory Size for VM. (4800MB)
2026-02-08 22:19:50 (12232): Setting CPU Count for VM. (8)
2026-02-08 22:19:50 (12232): Setting Chipset Options for VM.
2026-02-08 22:19:50 (12232): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-02-08 22:19:50 (12232): Setting Boot Options for VM.
2026-02-08 22:19:51 (12232): Setting Network Configuration for NAT. (Driver: virtio)
2026-02-08 22:19:51 (12232): Enabling VM Network Access.
2026-02-08 22:19:51 (12232): Disabling USB Support for VM.
2026-02-08 22:19:52 (12232): Disabling COM Port Support for VM.
2026-02-08 22:19:52 (12232): Disabling LPT Port Support for VM.
2026-02-08 22:19:52 (12232): Disabling Audio Support for VM.
2026-02-08 22:19:52 (12232): Disabling Clipboard Support for VM.
2026-02-08 22:19:53 (12232): Disabling Drag and Drop Support for VM.
2026-02-08 22:19:53 (12232): Adding storage controller(s) to VM.
2026-02-08 22:19:53 (12232): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-02-08 22:19:54 (12232): Adding VirtualBox Guest Additions to VM.
2026-02-08 22:19:54 (12232): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-02-08 22:19:54 (12232): forwarding host port 57752 to guest port 80
2026-02-08 22:19:54 (12232): Enabling remote desktop for VM.
2026-02-08 22:19:55 (12232): Required extension pack not installed, remote desktop not enabled.
2026-02-08 22:19:55 (12232): Enabling shared directory for VM.
2026-02-08 22:19:55 (12232): Starting VM using VBoxManage interface. (boinc_c39b3b7a3c8b7b9b, slot#2)
2026-02-08 22:20:04 (12232): Successfully started VM. (PID = '6508')
2026-02-08 22:20:04 (12232): Reporting VM Process ID to BOINC.
2026-02-08 22:20:04 (12232): Guest Log: BIOS: VirtualBox 7.1.4
2026-02-08 22:20:04 (12232): Guest Log: CPUID EDX: 0x178bfbff
2026-02-08 22:20:04 (12232): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-02-08 22:20:04 (12232): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-02-08 22:20:04 (12232): VM state change detected. (old = 'poweredoff', new = 'running')
2026-02-08 22:20:04 (12232): Detected: Web Application Enabled (http://localhost:57752)
2026-02-08 22:20:04 (12232): Preference change detected
2026-02-08 22:20:04 (12232): Setting CPU throttle for VM. (100%)
2026-02-08 22:20:04 (12232): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 300 seconds) or (Vbox_job.xml: 900 seconds))
2026-02-08 22:20:06 (12232): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-02-08 22:20:06 (12232): Guest Log: BIOS: Booting from Hard Disk...
2026-02-08 22:20:10 (12232): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-02-08 22:20:10 (12232): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-02-08 22:20:10 (12232): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-02-08 22:20:10 (12232): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-02-08 22:20:10 (12232): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-02-08 22:20:10 (12232): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-02-08 22:20:10 (12232): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-02-08 22:20:10 (12232): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-02-08 22:20:10 (12232): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-02-08 22:20:10 (12232): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-02-08 22:20:10 (12232): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-02-08 22:20:10 (12232): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-02-08 22:20:10 (12232): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-02-08 22:20:10 (12232): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-02-08 22:20:10 (12232): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-02-08 22:20:10 (12232): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-02-08 22:20:10 (12232): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-02-08 22:20:10 (12232): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-02-08 22:20:10 (12232): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-02-08 22:20:10 (12232): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-02-08 22:20:10 (12232): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-02-08 22:20:10 (12232): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-02-08 22:20:10 (12232): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-02-08 22:20:10 (12232): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-02-08 22:20:10 (12232): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-02-08 22:20:10 (12232): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-02-08 22:20:10 (12232): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-02-08 22:20:10 (12232): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-02-08 22:20:10 (12232): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-02-08 22:20:10 (12232): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-02-08 22:20:10 (12232): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-02-08 22:20:10 (12232): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-02-08 22:20:20 (12232): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-02-08 22:20:20 (12232): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-02-08 22:20:35 (12232): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-02-08 22:20:35 (12232): Guest Log: 00:00:00.000305 main     Log opened 2026-02-08T22:20:32.654073000Z
2026-02-08 22:20:35 (12232): Guest Log: 00:00:00.000501 main     OS Product: Linux
2026-02-08 22:20:35 (12232): Guest Log: 00:00:00.000578 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-02-08 22:20:35 (12232): Guest Log: 00:00:00.000644 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-02-08 22:20:35 (12232): Guest Log: 00:00:00.000711 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-02-08 22:20:35 (12232): Guest Log: 00:00:00.000714 main     Process ID: 1379
2026-02-08 22:20:35 (12232): Guest Log: 00:00:00.000716 main     Package type: LINUX_64BITS_GENERIC
2026-02-08 22:20:35 (12232): Guest Log: 00:00:00.002634 main     5.2.32 r132073 started. Verbose level = 0
2026-02-08 22:20:35 (12232): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-02-08 22:20:35 (12232): Guest Log: [INFO] Mounting shared directory
2026-02-08 22:20:35 (12232): Guest Log: [INFO] Checking for init_data.xml
2026-02-08 22:20:45 (12232): Guest Log: 00:00:10.028185 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 179 510 000ns (GuestNow=1 770 585 644 480 190 000 ns GuestLast=1 770 589 232 659 700 000 ns fSetTimeLastLoop=true )
2026-02-08 22:20:51 (12232): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-02-08 22:20:51 (12232): Guest Log: [INFO] Detected branch: prod
2026-02-08 22:20:53 (12232): Guest Log: This is the prod version of the ATLAS job wrapper
2026-02-08 22:20:53 (12232): Guest Log: Copying input files
2026-02-08 22:20:58 (12232): Guest Log: Copied input files into RunAtlas.
2026-02-08 22:20:58 (12232): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-02-08 22:20:58 (12232): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-02-08 22:20:58 (12232): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-02-08 22:20:58 (12232): Guest Log: Further information can be found at the LHC@home message board.
2026-02-08 22:21:17 (12232): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-02-08 22:21:18 (12232): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-02-08 22:21:18 (12232): Guest Log: 2.6.3.0 1661 0 30184 156033 4 1 3117739 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-02-08 22:21:19 (12232): Guest Log: copied the webapp to /var/www
2026-02-08 22:21:19 (12232): Guest Log: ATHENA_PROC_NUMBER=8
2026-02-08 22:21:19 (12232): Guest Log: ATHENA_CORE_NUMBER=8
2026-02-08 22:21:22 (12232): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-02-08 22:21:22 (12232): Guest Log:  *** Starting ATLAS job. (PandaID=7005401641 taskID=48310749) ***
2026-02-09 00:00:09 (12232): Status Report: Elapsed Time: '6000.000000'
2026-02-09 00:00:09 (12232): Status Report: CPU Time: '37249.671875'
2026-02-09 01:40:14 (12232): Status Report: Elapsed Time: '12000.000000'
2026-02-09 01:40:14 (12232): Status Report: CPU Time: '82924.859375'
2026-02-09 02:52:56 (12232): Guest Log:  *** Job finished ***
2026-02-09 02:52:56 (12232): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-02-09 02:52:56 (12232): Guest Log: 2026-02-09 01:52:30,141 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-02-09 02:52:56 (12232): Guest Log: 2026-02-09 01:52:30,141 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-02-09 02:52:56 (12232): Guest Log: 2026-02-09 01:52:43,694 | INFO     | [monitor] cgroup control has ended
2026-02-09 02:52:56 (12232): Guest Log: 2026-02-09 01:52:45,676 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140679488550720)>', '<ExcThread(monitor, started 140678818420480)>']
2026-02-09 02:52:56 (12232): Guest Log: 2026-02-09 01:52:46,000 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-02-09 02:52:56 (12232): Guest Log: 2026-02-09 01:52:46,000 | INFO     | [monitor] control thread has ended
2026-02-09 02:52:56 (12232): Guest Log: 2026-02-09 01:52:50,762 | INFO     | all workflow threads have been joined
2026-02-09 02:52:56 (12232): Guest Log: 2026-02-09 01:52:50,762 | INFO     | end of generic workflow (traces error code: 0)
2026-02-09 02:52:56 (12232): Guest Log: 2026-02-09 01:52:50,762 | INFO     | traces error code: 0
2026-02-09 02:52:56 (12232): Guest Log: 2026-02-09 01:52:50,763 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-02-09 02:52:56 (12232): Guest Log: 2026-02-09 01:52:50,962 [wrapper] ==== pilot stdout END ====
2026-02-09 02:52:56 (12232): Guest Log: 2026-02-09 01:52:50,974 [wrapper] ==== wrapper stdout RESUME ====
2026-02-09 02:52:56 (12232): Guest Log: 2026-02-09 01:52:50,986 [wrapper] pilotpid: 6110
2026-02-09 02:52:56 (12232): Guest Log: 2026-02-09 01:52:50,997 [wrapper] Pilot exit status: 0
2026-02-09 02:52:56 (12232): Guest Log: 2026-02-09 01:52:54,148 [wrapper] pandaids: 7005401641
2026-02-09 02:52:56 (12232): Guest Log: 2026-02-09 01:52:54,236 [wrapper] cleanup supervisor_pilot 28836 6111
2026-02-09 02:52:56 (12232): Guest Log: 2026-02-09 01:52:54,265 [wrapper] Test setup, not cleaning
2026-02-09 02:52:56 (12232): Guest Log: 2026-02-09 01:52:54,279 [wrapper] apfmon messages muted
2026-02-09 02:52:56 (12232): Guest Log: 2026-02-09 01:52:54,293 [wrapper] ==== wrapper stdout END ====
2026-02-09 02:52:56 (12232): Guest Log: 2026-02-09 01:52:54,304 [wrapper] ==== wrapper stderr END ====
2026-02-09 02:52:56 (12232): Guest Log:  *** Error codes and diagnostics ***
2026-02-09 02:52:56 (12232): Guest Log:     "exeErrorCode": 0,
2026-02-09 02:52:56 (12232): Guest Log:     "exeErrorDiag": "",
2026-02-09 02:52:56 (12232): Guest Log:     "pilotErrorCode": 0,
2026-02-09 02:52:56 (12232): Guest Log:     "pilotErrorDiag": "",
2026-02-09 02:52:56 (12232): Guest Log:  *** Listing of results directory ***
2026-02-09 02:52:56 (12232): Guest Log: total 187264
2026-02-09 02:52:56 (12232): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Feb  8 14:16 pilot3.tar.gz
2026-02-09 02:52:56 (12232): Guest Log: -rwx------. 1 atlas atlas     36322 Feb  8 14:19 runpilot2-wrapper.sh
2026-02-09 02:52:56 (12232): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Feb  8 14:23 queuedata.json
2026-02-09 02:52:56 (12232): Guest Log: -rwxr-xr-x. 1 atlas atlas      5954 Feb  8 21:20 init_data.xml
2026-02-09 02:52:56 (12232): Guest Log: -rwxr-xr-x. 1 atlas atlas    597951 Feb  8 21:20 input.tar.gz
2026-02-09 02:52:56 (12232): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Feb  8 21:20 start_atlas.sh
2026-02-09 02:52:56 (12232): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb  8 21:20 EVNT.48310747._000181.pool.root.1 -> /data/./ATLAS.root_0
2026-02-09 02:52:56 (12232): Guest Log: -rw-r--r--. 1 atlas atlas      2522 Feb  8 21:21 pandaJob.out
2026-02-09 02:52:56 (12232): Guest Log: -rw-------. 1 atlas atlas   1009496 Feb  8 21:23 agis_schedconf.cvmfs.json
2026-02-09 02:52:56 (12232): Guest Log: -rw-------. 1 atlas atlas       422 Feb  8 21:23 workernode_map.json
2026-02-09 02:52:56 (12232): Guest Log: drwx------. 5 atlas atlas      4096 Feb  8 21:23 pilot3
2026-02-09 02:52:56 (12232): Guest Log: -rw-------. 1 atlas atlas 182478158 Feb  9 01:50 HITS.48310749._009548.pool.root.1
2026-02-09 02:52:56 (12232): Guest Log: -rw-------. 1 atlas atlas        95 Feb  9 01:51 pilot_heartbeat.json
2026-02-09 02:52:56 (12232): Guest Log: -rw-------. 1 atlas atlas      1036 Feb  9 01:51 memory_monitor_summary.json
2026-02-09 02:52:56 (12232): Guest Log: -rw-------. 1 atlas atlas   1513088 Feb  9 01:51 agis_ddmendpoints.agis.ALL.json
2026-02-09 02:52:56 (12232): Guest Log: -rw-------. 1 atlas atlas    499567 Feb  9 01:51 log.48310749._009548.job.log.tgz.1
2026-02-09 02:52:56 (12232): Guest Log: -rw-------. 1 atlas atlas      6349 Feb  9 01:51 heartbeat.json
2026-02-09 02:52:56 (12232): Guest Log: -rw-------. 1 atlas atlas      4873 Feb  9 01:52 pilotlog.txt
2026-02-09 02:52:56 (12232): Guest Log: -rw-------. 1 atlas atlas   2209970 Feb  9 01:52 log.48310749._009548.job.log.1
2026-02-09 02:52:56 (12232): Guest Log: -rw-------. 1 atlas atlas       357 Feb  9 01:52 output.list
2026-02-09 02:52:56 (12232): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb  9 01:52 runtime_log
2026-02-09 02:52:56 (12232): Guest Log: -rw-------. 1 atlas atlas   2723840 Feb  9 01:52 result.tar.gz
2026-02-09 02:52:56 (12232): Guest Log: -rw-r--r--. 1 atlas atlas      8802 Feb  9 01:52 runtime_log.err
2026-02-09 02:52:56 (12232): Guest Log: -rw-------. 1 atlas atlas       677 Feb  9 01:52 l6zMDmnoK98n9Rq4apOajLDm4fhM0noT9bVooX4SDmrQdKDmVBfcjn.diag
2026-02-09 02:52:56 (12232): Guest Log: Looking for outputfile HITS.48310749._009548.pool.root.1
2026-02-09 02:52:56 (12232): Guest Log: HITS file was successfully produced
2026-02-09 02:52:56 (12232): Guest Log: -rw-------. 1 atlas atlas 182478158 Feb  9 01:50 /home/atlas/RunAtlas/HITS.48310749._009548.pool.root.1
2026-02-09 02:52:58 (12232): Guest Log: Successfully finished the ATLAS job!
2026-02-09 02:52:58 (12232): Guest Log: Copying the results back to the shared directory!
2026-02-09 02:52:58 (12232): Guest Log:  *** Contents of shared directory: ***
2026-02-09 02:52:58 (12232): Guest Log: total 668892
2026-02-09 02:52:58 (12232): Guest Log: -rwxrwxrwx. 1 root root 499117454 Feb  8 21:19 ATLAS.root_0
2026-02-09 02:52:58 (12232): Guest Log: -rwxrwxrwx. 1 root root 182478158 Feb  9 01:52 HITS.pool.root.1
2026-02-09 02:52:58 (12232): Guest Log: -rwxrwxrwx. 1 root root      5954 Feb  8 21:19 init_data.xml
2026-02-09 02:52:58 (12232): Guest Log: -rwxrwxrwx. 1 root root    597951 Feb  8 21:08 input.tar.gz
2026-02-09 02:52:58 (12232): Guest Log: -rwxrwxrwx. 1 root root   2723840 Feb  9 01:52 result.tar.gz
2026-02-09 02:52:58 (12232): Guest Log: -rwxrwxrwx. 1 root root     15845 Feb  8 21:08 start_atlas.sh
2026-02-09 02:52:58 (12232): Guest Log:  *** Success! Shutting down the machine. ***
2026-02-09 02:52:58 (12232): VM Completion File Detected.
2026-02-09 02:52:58 (12232): Powering off VM.
2026-02-09 02:53:00 (12232): Successfully stopped VM.
2026-02-09 02:53:00 (12232): Deregistering VM. (boinc_c39b3b7a3c8b7b9b, slot#2)
2026-02-09 02:53:00 (12232): Removing network bandwidth throttle group from VM.
2026-02-09 02:53:00 (12232): Removing VM from VirtualBox.
2026-02-09 02:53:05 (12232): called boinc_finish(0)

</stderr_txt>
]]>

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