Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
09:11:07 (2345674): wrapper (7.7.26015): starting
09:11:07 (2345674): wrapper: running run_atlas (--nthreads 3)
[2026-02-09 09:11:07] Arguments: --nthreads 3
[2026-02-09 09:11:07] Threads: 3
[2026-02-09 09:11:07] Checking for CVMFS
[2026-02-09 09:11:07] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-09 09:11:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-09 09:11:08] Running cvmfs_config stat atlas.cern.ch
[2026-02-09 09:11:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-09 09:11:08] 2.9.2.0 1622115 4362 78328 156048 3 50 26308194 36864000 0 130560 0 1884803 99.984 156889 17174 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-09 09:11:08] CVMFS is ok
[2026-02-09 09:11:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-09 09:11:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-09 09:11:08] Further information can be found at the LHC@home message board.
[2026-02-09 09:11:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-09 09:11:08] Checking for apptainer binary...
[2026-02-09 09:11:08] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-09 09:11:08] Running /usr/bin/apptainer --version
[2026-02-09 09:11:08] apptainer version 1.4.1-1.1
[2026-02-09 09:11:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-09 09:11:08] magicA246a
[2026-02-09 09:11:08] apptainer works
[2026-02-09 09:11:08] Set ATHENA_PROC_NUMBER=3
[2026-02-09 09:11:08] Set ATHENA_CORE_NUMBER=3
[2026-02-09 09:11:08] Starting ATLAS job with PandaID=7005400732
[2026-02-09 09:11:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-09 10:24:28]  *** The last 200 lines of the pilot log: ***
[2026-02-09 10:24:28] 2026-02-09 09:23:41,947 | INFO     | [data] copytool_in thread has finished
[2026-02-09 10:24:28] 2026-02-09 09:23:42,193 | INFO     | [job] control thread has finished
[2026-02-09 10:24:28] 2026-02-09 09:23:42,250 | INFO     | [payload] execute_payloads thread has finished
[2026-02-09 10:24:28] 2026-02-09 09:23:42,734 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-09 10:24:28] 2026-02-09 09:23:46,741 | INFO     | [data] queue_monitor thread has finished
[2026-02-09 10:24:28] 2026-02-09 09:23:49,898 | INFO     | job.realtimelogging is not enabled
[2026-02-09 10:24:28] 2026-02-09 09:23:50,904 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-09 10:24:28] 2026-02-09 09:24:10,796 | INFO     | PID=2349711 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-09 10:24:28] 2026-02-09 09:24:10,796 | INFO     | found 0 job(s) in 20 queues
[2026-02-09 10:24:28] 2026-02-09 09:24:10,796 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-09 10:24:28] 2026-02-09 09:24:10,796 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-09 10:24:28] 2026-02-09 09:24:22,662 | INFO     | [monitor] cgroup control has ended
[2026-02-09 10:24:28] 2026-02-09 09:24:23,752 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140608625665856)>', '<ExcThread(monitor, started 140608136001280)>']
[2026-02-09 10:24:28] 2026-02-09 09:24:23,857 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-09 10:24:28] 2026-02-09 09:24:23,857 | INFO     | [monitor] control thread has ended
[2026-02-09 10:24:28] 2026-02-09 09:24:28,771 | INFO     | all workflow threads have been joined
[2026-02-09 10:24:28] 2026-02-09 09:24:28,771 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-09 10:24:28] 2026-02-09 09:24:28,771 | INFO     | traces error code: 0
[2026-02-09 10:24:28] 2026-02-09 09:24:28,772 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-09 10:24:28] 2026-02-09 09:24:28,825 [wrapper] ==== pilot stdout END ====
[2026-02-09 10:24:28] 2026-02-09 09:24:28,827 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-09 10:24:28] 2026-02-09 09:24:28,830 [wrapper] pilotpid: 2349711
[2026-02-09 10:24:28] 2026-02-09 09:24:28,832 [wrapper] Pilot exit status: 0
[2026-02-09 10:24:28] 2026-02-09 09:24:28,839 [wrapper] pandaids: 7005400732
[2026-02-09 10:24:28] 2026-02-09 09:24:28,858 [wrapper] cleanup supervisor_pilot 2360664 2349712
[2026-02-09 10:24:28] 2026-02-09 09:24:28,861 [wrapper] Test setup, not cleaning
[2026-02-09 10:24:28] 2026-02-09 09:24:28,863 [wrapper] apfmon messages muted
[2026-02-09 10:24:28] 2026-02-09 09:24:28,866 [wrapper] ==== wrapper stdout END ====
[2026-02-09 10:24:28] 2026-02-09 09:24:28,868 [wrapper] ==== wrapper stderr END ====
[2026-02-09 10:24:28]  *** Error codes and diagnostics ***
[2026-02-09 10:24:28]     "exeErrorCode": 0,
[2026-02-09 10:24:28]     "exeErrorDiag": "",
[2026-02-09 10:24:28]     "pilotErrorCode": 0,
[2026-02-09 10:24:28]     "pilotErrorDiag": "",
[2026-02-09 10:24:28]  *** Listing of results directory ***
[2026-02-09 10:24:28] total 658352
[2026-02-09 10:24:28] -rw-r--r-- 1 boinc boinc    584627 Feb  8 15:16 pilot3.tar.gz
[2026-02-09 10:24:28] -rwx------ 1 boinc boinc     36322 Feb  8 15:19 runpilot2-wrapper.sh
[2026-02-09 10:24:28] -rw-r--r-- 1 boinc boinc      5111 Feb  8 15:23 queuedata.json
[2026-02-09 10:24:28] -rw-r--r-- 1 boinc boinc       100 Feb  9 09:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-09 10:24:28] -rwxr-xr-x 1 boinc boinc      7986 Feb  9 09:11 run_atlas
[2026-02-09 10:24:28] -rw-r--r-- 1 boinc boinc       105 Feb  9 09:11 job.xml
[2026-02-09 10:24:28] -rw-r--r-- 2 boinc boinc 493354628 Feb  9 09:11 EVNT.48310747._000176.pool.root.1
[2026-02-09 10:24:28] -rw-r--r-- 2 boinc boinc    597950 Feb  9 09:11 input.tar.gz
[2026-02-09 10:24:28] -rw-r--r-- 2 boinc boinc     15845 Feb  9 09:11 start_atlas.sh
[2026-02-09 10:24:28] drwxrwx--x 2 boinc boinc      4096 Feb  9 09:11 shared
[2026-02-09 10:24:28] -rw-r--r-- 1 boinc boinc         0 Feb  9 09:11 boinc_setup_complete
[2026-02-09 10:24:28] -rw-r--r-- 1 boinc boinc      6447 Feb  9 09:11 init_data.xml
[2026-02-09 10:24:28] -rw-r--r-- 1 boinc boinc         0 Feb  9 09:11 boinc_lockfile
[2026-02-09 10:24:28] -rw-r--r-- 1 boinc boinc      2524 Feb  9 09:11 pandaJob.out
[2026-02-09 10:24:28] -rw------- 1 boinc boinc   1009488 Feb  9 09:11 agis_schedconf.cvmfs.json
[2026-02-09 10:24:28] -rw------- 1 boinc boinc   1513144 Feb  9 09:11 agis_ddmendpoints.agis.ALL.json
[2026-02-09 10:24:28] -rw------- 1 boinc boinc       428 Feb  9 09:11 workernode_map.json
[2026-02-09 10:24:28] drwx------ 5 boinc boinc      4096 Feb  9 09:11 pilot3
[2026-02-09 10:24:28] -rw------- 1 boinc boinc 175040445 Feb  9 10:23 HITS.48310749._009311.pool.root.1
[2026-02-09 10:24:28] -rw-r--r-- 1 boinc boinc       530 Feb  9 10:23 boinc_task_state.xml
[2026-02-09 10:24:28] -rw------- 1 boinc boinc      1029 Feb  9 10:23 memory_monitor_summary.json
[2026-02-09 10:24:28] -rw------- 1 boinc boinc    272139 Feb  9 10:23 log.48310749._009311.job.log.tgz.1
[2026-02-09 10:24:28] -rw------- 1 boinc boinc      6305 Feb  9 10:23 heartbeat.json
[2026-02-09 10:24:28] -rw-r--r-- 1 boinc boinc        27 Feb  9 10:24 wrapper_checkpoint.txt
[2026-02-09 10:24:28] -rw-r--r-- 1 boinc boinc      8192 Feb  9 10:24 boinc_mmap_file
[2026-02-09 10:24:28] -rw------- 1 boinc boinc        95 Feb  9 10:24 pilot_heartbeat.json
[2026-02-09 10:24:28] -rw------- 1 boinc boinc      4820 Feb  9 10:24 pilotlog.txt
[2026-02-09 10:24:28] -rw------- 1 boinc boinc    643656 Feb  9 10:24 log.48310749._009311.job.log.1
[2026-02-09 10:24:28] -rw------- 1 boinc boinc       357 Feb  9 10:24 output.list
[2026-02-09 10:24:28] -rw-r--r-- 1 boinc boinc       620 Feb  9 10:24 runtime_log
[2026-02-09 10:24:28] -rw------- 1 boinc boinc    931840 Feb  9 10:24 result.tar.gz
[2026-02-09 10:24:28] -rw-r--r-- 1 boinc boinc      8916 Feb  9 10:24 runtime_log.err
[2026-02-09 10:24:28] -rw------- 1 boinc boinc       661 Feb  9 10:24 6DGLDmnoK98n9Rq4apOajLDm4fhM0noT9bVooX4SDmsPdKDmyHJcJm.diag
[2026-02-09 10:24:28] -rw-r--r-- 1 boinc boinc      5446 Feb  9 10:24 stderr.txt
[2026-02-09 10:24:28] HITS file was successfully produced:
[2026-02-09 10:24:28] -rw------- 1 boinc boinc 175040445 Feb  9 10:23 shared/HITS.pool.root.1
[2026-02-09 10:24:28]  *** Contents of shared directory: ***
[2026-02-09 10:24:28] total 654252
[2026-02-09 10:24:28] -rw-r--r-- 2 boinc boinc 493354628 Feb  9 09:11 ATLAS.root_0
[2026-02-09 10:24:28] -rw-r--r-- 2 boinc boinc    597950 Feb  9 09:11 input.tar.gz
[2026-02-09 10:24:28] -rw-r--r-- 2 boinc boinc     15845 Feb  9 09:11 start_atlas.sh
[2026-02-09 10:24:28] -rw------- 1 boinc boinc 175040445 Feb  9 10:23 HITS.pool.root.1
[2026-02-09 10:24:28] -rw------- 1 boinc boinc    931840 Feb  9 10:24 result.tar.gz
10:24:30 (2345674): run_atlas exited; CPU time 12355.220058
10:24:30 (2345674): called boinc_finish(0)

</stderr_txt>
]]>

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