Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:20:20 (3918769): wrapper (7.7.26015): starting
15:20:20 (3918769): wrapper: running run_atlas (--nthreads 10)
[2026-02-08 15:20:20] Arguments: --nthreads 10
[2026-02-08 15:20:20] Threads: 10
[2026-02-08 15:20:20] Checking for CVMFS
[2026-02-08 15:20:20] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-08 15:20:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-08 15:20:20] Running cvmfs_config stat atlas.cern.ch
[2026-02-08 15:20:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-08 15:20:20] 2.13.3.0 10223 137060 230368 156032 2 294 36938889 40960000 30576 16776704 0 1507174225 99.711 1142503249 49615 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-02-08 15:20:20] CVMFS is ok
[2026-02-08 15:20:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-08 15:20:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-08 15:20:20] Further information can be found at the LHC@home message board.
[2026-02-08 15:20:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-08 15:20:20] Checking for apptainer binary...
[2026-02-08 15:20:20] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-08 15:20:20] Running /usr/bin/apptainer --version
[2026-02-08 15:20:21] apptainer version 1.4.5-2.el9
[2026-02-08 15:20:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-08 15:20:21] c8-7-6.aglt2.org
[2026-02-08 15:20:21] apptainer works
[2026-02-08 15:20:22] Set ATHENA_PROC_NUMBER=10
[2026-02-08 15:20:22] Set ATHENA_CORE_NUMBER=10
[2026-02-08 15:20:22] Starting ATLAS job with PandaID=7000876411
[2026-02-08 15:20:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-08 16:31:16]  *** The last 200 lines of the pilot log: ***
[2026-02-08 16:31:16]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-08 16:31:16]  is_altstaged=None
[2026-02-08 16:31:16]  is_tar=False
[2026-02-08 16:31:16]  lfn=log.48431113._006241.job.log.tgz.1
[2026-02-08 16:31:16]  mtime=0
[2026-02-08 16:31:16]  protocol_id=None
[2026-02-08 16:31:16]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-08 16:31:16]  replicas=None
[2026-02-08 16:31:16]  scope=mc23_13p6TeV
[2026-02-08 16:31:16]  status=None
[2026-02-08 16:31:16]  status_code=0
[2026-02-08 16:31:16]  storage_token=
[2026-02-08 16:31:16]  surl=/tmp/boinchome/slots/3/PanDA_Pilot-7000876411/log.48431113._006241.job.log.tgz.1
[2026-02-08 16:31:16]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/00/f5/log.48431113._006241.job.log.tgz.1
[2026-02-08 16:31:16]  workdir=None
[2026-02-08 16:31:16] ]
[2026-02-08 16:31:16] 2026-02-08 21:30:39,635 | INFO     | transferring file log.48431113._006241.job.log.tgz.1 from /tmp/boinchome/slots/3/PanDA_Pilot-7000876411/log.48431113._006241.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-02-08 16:31:16] 2026-02-08 21:30:39,635 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/3/PanDA_Pilot-7000876411/log.48431113._006241.job.log.tgz.1 /tmp/boinchome/slots/3/log.48431113._006241.job
[2026-02-08 16:31:16] 2026-02-08 21:30:39,783 | INFO     | adding to output.list: log.48431113._006241.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/00/f5/log.48431113._006241.job.log.tg
[2026-02-08 16:31:16] 2026-02-08 21:30:39,784 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-08 16:31:16] 2026-02-08 21:30:39,790 | INFO     | summary of transferred files:
[2026-02-08 16:31:16] 2026-02-08 21:30:39,790 | INFO     |  -- lfn=log.48431113._006241.job.log.tgz.1, status_code=0, status=transferred
[2026-02-08 16:31:16] 2026-02-08 21:30:39,790 | INFO     | stage-out finished correctly
[2026-02-08 16:31:16] 2026-02-08 21:30:39,896 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-08 16:31:16] 2026-02-08 21:30:41,190 | INFO     | time since job start (4201s) is within the limit (349056.0s)
[2026-02-08 16:31:16] 2026-02-08 21:30:41,348 | INFO     | job 7000876411 has state=finished
[2026-02-08 16:31:16] 2026-02-08 21:30:41,348 | INFO     | preparing for final server update for job 7000876411 in state='finished'
[2026-02-08 16:31:16] 2026-02-08 21:30:41,348 | INFO     | reading metadata from: /tmp/boinchome/slots/3/PanDA_Pilot-7000876411/jobReport.json
[2026-02-08 16:31:16] 2026-02-08 21:30:41,350 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/3/workernode_map.json
[2026-02-08 16:31:16] 2026-02-08 21:30:41,350 | INFO     | this job has now completed (state=finished)
[2026-02-08 16:31:16] 2026-02-08 21:30:41,350 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-08 16:31:16] 2026-02-08 21:30:41,350 | INFO     | log transfer has been attempted: DONE
[2026-02-08 16:31:16] 2026-02-08 21:30:41,350 | INFO     | job 7000876411 has finished - writing final server update
[2026-02-08 16:31:16] 2026-02-08 21:30:41,350 | INFO     | total number of processed events: 400 (read)
[2026-02-08 16:31:16] 2026-02-08 21:30:41,384 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-7000876411/memory_monitor_summary.json (trf name=prmon)
[2026-02-08 16:31:16] 2026-02-08 21:30:41,384 | INFO     | extracted standard info from prmon json
[2026-02-08 16:31:16] 2026-02-08 21:30:41,384 | INFO     | extracted standard memory fields from prmon json
[2026-02-08 16:31:16] 2026-02-08 21:30:41,384 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-08 16:31:16] 2026-02-08 21:30:41,384 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-08 16:31:16] 2026-02-08 21:30:41,385 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-08 16:31:16] 2026-02-08 21:30:41,385 | INFO     | fitting pss+swap vs Time
[2026-02-08 16:31:16] 2026-02-08 21:30:41,385 | INFO     | sum of square deviations: 73887319.43548375
[2026-02-08 16:31:16] 2026-02-08 21:30:41,386 | INFO     | sum of deviations: -9462517909.951614
[2026-02-08 16:31:16] 2026-02-08 21:30:41,386 | INFO     | mean x: 1770584230.532258
[2026-02-08 16:31:16] 2026-02-08 21:30:41,386 | INFO     | mean y: 2819241.7258064514
[2026-02-08 16:31:16] 2026-02-08 21:30:41,386 | INFO     | intersect: 226756003962.66638
[2026-02-08 16:31:16] 2026-02-08 21:30:41,386 | INFO     | chi2: 0.03256308445344922
[2026-02-08 16:31:16] 2026-02-08 21:30:41,386 | INFO     | current memory leak: -128.07 B/s (using 62 data points, chi2=0.03)
[2026-02-08 16:31:16] 2026-02-08 21:30:41,386 | INFO     | could have reported an average CPU frequency of 3799 MHz (6 samples)
[2026-02-08 16:31:16] 2026-02-08 21:30:41,386 | INFO     | ..............................
[2026-02-08 16:31:16] 2026-02-08 21:30:41,386 | INFO     | . Timing measurements:
[2026-02-08 16:31:16] 2026-02-08 21:30:41,386 | INFO     | . get job = 0 s
[2026-02-08 16:31:16] 2026-02-08 21:30:41,386 | INFO     | . initial setup = 7 s
[2026-02-08 16:31:16] 2026-02-08 21:30:41,386 | INFO     | . payload setup = 7 s
[2026-02-08 16:31:16] 2026-02-08 21:30:41,386 | INFO     | . stage-in = 0 s
[2026-02-08 16:31:16] 2026-02-08 21:30:41,386 | INFO     | . payload execution = 4178 s
[2026-02-08 16:31:16] 2026-02-08 21:30:41,386 | INFO     | . stage-out = 1 s
[2026-02-08 16:31:16] 2026-02-08 21:30:41,386 | INFO     | . log creation = 0 s
[2026-02-08 16:31:16] 2026-02-08 21:30:41,386 | INFO     | ..............................
[2026-02-08 16:31:16] 2026-02-08 21:30:41,486 | INFO     | 
[2026-02-08 16:31:16] 2026-02-08 21:30:41,486 | INFO     | job summary report
[2026-02-08 16:31:16] 2026-02-08 21:30:41,486 | INFO     | --------------------------------------------------
[2026-02-08 16:31:16] 2026-02-08 21:30:41,486 | INFO     | PanDA job id: 7000876411
[2026-02-08 16:31:16] 2026-02-08 21:30:41,486 | INFO     | task id: 48431113
[2026-02-08 16:31:16] 2026-02-08 21:30:41,486 | INFO     | errors: (none)
[2026-02-08 16:31:16] 2026-02-08 21:30:41,486 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-08 16:31:16] 2026-02-08 21:30:41,486 | INFO     | pilot state: finished 
[2026-02-08 16:31:16] 2026-02-08 21:30:41,486 | INFO     | transexitcode: 0
[2026-02-08 16:31:16] 2026-02-08 21:30:41,486 | INFO     | exeerrorcode: 0
[2026-02-08 16:31:16] 2026-02-08 21:30:41,486 | INFO     | exeerrordiag: 
[2026-02-08 16:31:16] 2026-02-08 21:30:41,486 | INFO     | exitcode: 0
[2026-02-08 16:31:16] 2026-02-08 21:30:41,486 | INFO     | exitmsg: OK
[2026-02-08 16:31:16] 2026-02-08 21:30:41,486 | INFO     | cpuconsumptiontime: 31090 s
[2026-02-08 16:31:16] 2026-02-08 21:30:41,486 | INFO     | nevents: 400
[2026-02-08 16:31:16] 2026-02-08 21:30:41,486 | INFO     | neventsw: 0
[2026-02-08 16:31:16] 2026-02-08 21:30:41,486 | INFO     | pid: 3928906
[2026-02-08 16:31:16] 2026-02-08 21:30:41,487 | INFO     | pgrp: 3928906
[2026-02-08 16:31:16] 2026-02-08 21:30:41,487 | INFO     | corecount: 10
[2026-02-08 16:31:16] 2026-02-08 21:30:41,487 | INFO     | event service: False
[2026-02-08 16:31:16] 2026-02-08 21:30:41,487 | INFO     | sizes: {0: 2283118, 11: 2283118, 4186: 2309361, 4188: 2318415, 4190: 2318553}
[2026-02-08 16:31:16] 2026-02-08 21:30:41,487 | INFO     | --------------------------------------------------
[2026-02-08 16:31:16] 2026-02-08 21:30:41,487 | INFO     | 
[2026-02-08 16:31:16] 2026-02-08 21:30:41,487 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-02-08 16:31:16] 2026-02-08 21:30:41,548 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-08 16:31:16] 2026-02-08 21:30:41,548 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-08 16:31:16] 2026-02-08 21:30:41,548 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-08 16:31:16] 2026-02-08 21:30:41,548 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-08 16:31:16] 2026-02-08 21:30:41,548 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-08 16:31:16] 2026-02-08 21:30:41,548 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-08 16:31:16] 2026-02-08 21:30:41,548 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-08 16:31:16] 2026-02-08 21:30:41,548 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-08 16:31:16] 2026-02-08 21:30:41,548 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-08 16:31:16] 2026-02-08 21:30:41,548 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-08 16:31:16] 2026-02-08 21:30:41,548 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-08 16:31:16] 2026-02-08 21:30:41,548 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-08 16:31:16] 2026-02-08 21:30:41,548 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-08 16:31:16] 2026-02-08 21:30:41,548 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-08 16:31:16] 2026-02-08 21:30:41,548 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-08 16:31:16] 2026-02-08 21:30:41,548 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-08 16:31:16] 2026-02-08 21:30:41,548 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-08 16:31:16] 2026-02-08 21:30:41,548 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-08 16:31:16] 2026-02-08 21:30:41,549 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-08 16:31:16] 2026-02-08 21:30:41,549 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-08 16:31:16] 2026-02-08 21:30:41,549 | INFO     | job 7000876411 has completed (purged errors)
[2026-02-08 16:31:16] 2026-02-08 21:30:41,549 | INFO     | overall cleanup function is called
[2026-02-08 16:31:16] 2026-02-08 21:30:42,556 | INFO     | --- collectZombieJob: --- 10, [3928906]
[2026-02-08 16:31:16] 2026-02-08 21:30:42,556 | INFO     | zombie collector waiting for pid 3928906
[2026-02-08 16:31:16] 2026-02-08 21:30:42,556 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-08 16:31:16] 2026-02-08 21:30:42,556 | INFO     | collected zombie processes
[2026-02-08 16:31:16] 2026-02-08 21:30:42,556 | INFO     | will attempt to kill all subprocesses of pid=3928906
[2026-02-08 16:31:16] 2026-02-08 21:30:43,374 | INFO     | process IDs to be killed: [3928906] (in reverse order)
[2026-02-08 16:31:16] 2026-02-08 21:30:43,581 | WARNING  | found no corresponding commands to process id(s)
[2026-02-08 16:31:16] 2026-02-08 21:30:43,581 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-08 16:31:16] 2026-02-08 21:30:43,632 | INFO     | did not find any defunct processes belonging to 3928906
[2026-02-08 16:31:16] 2026-02-08 21:30:43,689 | INFO     | did not find any defunct processes belonging to 3928906
[2026-02-08 16:31:16] 2026-02-08 21:30:43,689 | INFO     | ready for new job
[2026-02-08 16:31:16] 2026-02-08 21:30:43,689 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-08 16:31:16] 2026-02-08 21:30:43,690 | INFO     | **************************************
[2026-02-08 16:31:16] 2026-02-08 21:30:43,690 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-08 16:31:16] 2026-02-08 21:30:43,690 | INFO     | **************************************
[2026-02-08 16:31:16] 2026-02-08 21:30:43,690 | INFO     | 
[2026-02-08 16:31:16] 2026-02-08 21:30:43,704 | INFO     | architecture information:
[2026-02-08 16:31:16] 2026-02-08 21:30:43,708 | INFO     | executing command: cat /etc/os-release
[2026-02-08 16:31:16] 2026-02-08 21:30:43,788 | INFO     | cat /etc/os-release:
[2026-02-08 16:31:16] NAME="CentOS Linux"
[2026-02-08 16:31:16] VERSION="7 (Core)"
[2026-02-08 16:31:16] ID="centos"
[2026-02-08 16:31:16] ID_LIKE="rhel fedora"
[2026-02-08 16:31:16] VERSION_ID="7"
[2026-02-08 16:31:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-08 16:31:16] ANSI_COLOR="0;31"
[2026-02-08 16:31:16] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-08 16:31:16] HOME_URL="https://www.centos.org/"
[2026-02-08 16:31:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-08 16:31:16] 
[2026-02-08 16:31:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-08 16:31:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-08 16:31:16] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-08 16:31:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-08 16:31:16] 
[2026-02-08 16:31:16] 2026-02-08 21:30:43,790 | INFO     | **************************************
[2026-02-08 16:31:16] 2026-02-08 21:30:44,247 | WARNING  | process 3928906 can no longer be monitored (due to stat problems) - aborting
[2026-02-08 16:31:16] 2026-02-08 21:30:44,306 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-02-08 16:31:16] 2026-02-08 21:30:44,343 | INFO     | sufficient remaining disk space (165818662912 B)
[2026-02-08 16:31:16] 2026-02-08 21:30:44,343 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-08 16:31:16] 2026-02-08 21:30:44,343 | INFO     | current server update state: UPDATING_FINAL
[2026-02-08 16:31:16] 2026-02-08 21:30:44,343 | INFO     | update_server=False
[2026-02-08 16:31:16] 2026-02-08 21:30:44,343 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-08 16:31:16] 2026-02-08 21:30:44,406 | INFO     | all data control threads have been joined
[2026-02-08 16:31:16] 2026-02-08 21:30:44,817 | INFO     | all job control threads have been joined
[2026-02-08 16:31:16] 2026-02-08 21:30:44,919 | INFO     | using path: /tmp/boinchome/slots/3/memory_monitor_summary.json (trf name=prmon)
[2026-02-08 16:31:16] 2026-02-08 21:30:45,349 | INFO     | [job] retrieve thread has finished
[2026-02-08 16:31:16] 2026-02-08 21:30:45,418 | INFO     | [data] control thread has finished
[2026-02-08 16:31:16] 2026-02-08 21:30:45,437 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-08 16:31:16] 2026-02-08 21:30:45,585 | INFO     | number of running child processes to parent process 3928906: 1
[2026-02-08 16:31:16] 2026-02-08 21:30:45,585 | INFO     | maximum number of monitored processes: 6
[2026-02-08 16:31:16] 2026-02-08 21:30:45,585 | INFO     | aborting job monitoring since job object (job id=7000876411) has expired
[2026-02-08 16:31:16] 2026-02-08 21:30:45,585 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-08 16:31:16] 2026-02-08 21:30:45,585 | INFO     | will abort loop
[2026-02-08 16:31:16] 2026-02-08 21:30:45,760 | INFO     | [job] create_data_payload thread has finished
[2026-02-08 16:31:16] 2026-02-08 21:30:45,760 | INFO     | [job] validate thread has finished
[2026-02-08 16:31:16] 2026-02-08 21:30:45,761 | INFO     | [payload] failed_post thread has finished
[2026-02-08 16:31:16] 2026-02-08 21:30:45,775 | INFO     | all payload control threads have been joined
[2026-02-08 16:31:16] 2026-02-08 21:30:45,829 | INFO     | [job] control thread has finished
[2026-02-08 16:31:16] 2026-02-08 21:30:45,847 | INFO     | [payload] validate_pre thread has finished
[2026-02-08 16:31:16] 2026-02-08 21:30:46,049 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-08 16:31:16] 2026-02-08 21:30:46,298 | INFO     | [payload] execute_payloads thread has finished
[2026-02-08 16:31:16] 2026-02-08 21:30:46,523 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-08 16:31:16] 2026-02-08 21:30:46,591 | INFO     | [job] job monitor thread has finished
[2026-02-08 16:31:16] 2026-02-08 21:30:46,781 | INFO     | [payload] control thread has finished
[2026-02-08 16:31:16] 2026-02-08 21:30:46,815 | INFO     | [data] copytool_in thread has finished
[2026-02-08 16:31:16] 2026-02-08 21:30:46,926 | INFO     | [payload] validate_post thread has finished
[2026-02-08 16:31:16] 2026-02-08 21:30:47,041 | INFO     | [monitor] cgroup control has ended
[2026-02-08 16:31:16] 2026-02-08 21:30:47,444 | INFO     | [data] copytool_out thread has finished
[2026-02-08 16:31:16] 2026-02-08 21:30:47,529 | INFO     | [job] queue monitor thread has finished
[2026-02-08 16:31:16] 2026-02-08 21:30:50,058 | INFO     | [data] queue_monitor thread has finished
[2026-02-08 16:31:16] 2026-02-08 21:30:54,705 | INFO     | job.realtimelogging is not enabled
[2026-02-08 16:31:16] 2026-02-08 21:30:55,711 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-08 16:31:16] 2026-02-08 21:30:56,198 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140525092828992)>', '<ExcThread(monitor, started 140524610643712)>']
[2026-02-08 16:31:16] 2026-02-08 21:31:01,224 | INFO     | all workflow threads have been joined
[2026-02-08 16:31:16] 2026-02-08 21:31:01,224 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-08 16:31:16] 2026-02-08 21:31:01,224 | INFO     | traces error code: 0
[2026-02-08 16:31:16] 2026-02-08 21:31:01,224 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-08 16:31:16] 2026-02-08 21:31:15,233 | INFO     | PID=3922741 has CPU usage=8.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-08 16:31:16] 2026-02-08 21:31:15,233 | INFO     | .. there are 32 such processes running
[2026-02-08 16:31:16] 2026-02-08 21:31:15,234 | INFO     | found 0 job(s) in 20 queues
[2026-02-08 16:31:16] 2026-02-08 21:31:15,234 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-08 16:31:16] 2026-02-08 21:31:15,234 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-08 16:31:16] 2026-02-08 21:31:15,234 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-08 16:31:16] 2026-02-08 21:31:15,234 | INFO     | [monitor] control thread has ended
[2026-02-08 16:31:16] 2026-02-08 21:31:15,324 [wrapper] ==== pilot stdout END ====
[2026-02-08 16:31:16] 2026-02-08 21:31:15,327 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-08 16:31:16] 2026-02-08 21:31:15,329 [wrapper] pilotpid: 3922741
[2026-02-08 16:31:16] 2026-02-08 21:31:15,331 [wrapper] Pilot exit status: 0
[2026-02-08 16:31:16] 2026-02-08 21:31:15,392 [wrapper] pandaids: 7000876411
[2026-02-08 16:31:16] 2026-02-08 21:31:15,782 [wrapper] cleanup supervisor_pilot  199945 3922742
[2026-02-08 16:31:16] 2026-02-08 21:31:15,793 [wrapper] Test setup, not cleaning
[2026-02-08 16:31:16] 2026-02-08 21:31:15,808 [wrapper] apfmon messages muted
[2026-02-08 16:31:16] 2026-02-08 21:31:15,858 [wrapper] ==== wrapper stdout END ====
[2026-02-08 16:31:16] 2026-02-08 21:31:15,876 [wrapper] ==== wrapper stderr END ====
[2026-02-08 16:31:16]  *** Error codes and diagnostics ***
[2026-02-08 16:31:16]     "exeErrorCode": 0,
[2026-02-08 16:31:16]     "exeErrorDiag": "",
[2026-02-08 16:31:16]     "pilotErrorCode": 0,
[2026-02-08 16:31:16]     "pilotErrorDiag": "",
[2026-02-08 16:31:16]  *** Listing of results directory ***
[2026-02-08 16:31:16] total 902248
[2026-02-08 16:31:16] -rw-r--r--. 1 boincer umatlas    584627 Feb  7 15:44 pilot3.tar.gz
[2026-02-08 16:31:16] -rwx------. 1 boincer umatlas     36322 Feb  7 15:46 runpilot2-wrapper.sh
[2026-02-08 16:31:16] -rw-r--r--. 1 boincer umatlas      5111 Feb  7 15:48 queuedata.json
[2026-02-08 16:31:16] -rw-r--r--. 1 boincer umatlas       100 Feb  8 15:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-08 16:31:16] -rwxr-xr-x. 1 boincer umatlas      7986 Feb  8 15:20 run_atlas
[2026-02-08 16:31:16] -rw-r--r--. 1 boincer umatlas       105 Feb  8 15:20 job.xml
[2026-02-08 16:31:16] -rw-r--r--. 2 boincer umatlas 654568863 Feb  8 15:20 EVNT.48431111._000124.pool.root.1
[2026-02-08 16:31:16] -rw-r--r--. 2 boincer umatlas     15845 Feb  8 15:20 start_atlas.sh
[2026-02-08 16:31:16] drwxrwx--x. 2 boincer umatlas      4096 Feb  8 15:20 shared
[2026-02-08 16:31:16] -rw-r--r--. 2 boincer umatlas    597950 Feb  8 15:20 input.tar.gz
[2026-02-08 16:31:16] -rw-r--r--. 1 boincer umatlas         0 Feb  8 15:20 boinc_lockfile
[2026-02-08 16:31:16] -rw-r--r--. 1 boincer umatlas      2545 Feb  8 15:20 pandaJob.out
[2026-02-08 16:31:16] -rw-------. 1 boincer umatlas        57 Feb  8 15:20 setup.sh.local
[2026-02-08 16:31:16] -rw-------. 1 boincer umatlas   1009496 Feb  8 15:20 agis_schedconf.cvmfs.json
[2026-02-08 16:31:16] -rw-------. 1 boincer umatlas   1513088 Feb  8 15:20 agis_ddmendpoints.agis.ALL.json
[2026-02-08 16:31:16] -rw-------. 1 boincer umatlas       426 Feb  8 15:20 workernode_map.json
[2026-02-08 16:31:16] drwx------. 5 boincer umatlas      4096 Feb  8 15:20 pilot3
[2026-02-08 16:31:16] -rw-r--r--. 1 boincer umatlas      7171 Feb  8 16:29 init_data.xml
[2026-02-08 16:31:16] -rw-------. 1 boincer umatlas 263499433 Feb  8 16:29 HITS.48431113._006241.pool.root.1
[2026-02-08 16:31:16] -rw-r--r--. 1 boincer umatlas       530 Feb  8 16:29 boinc_task_state.xml
[2026-02-08 16:31:16] -rw-------. 1 boincer umatlas      1045 Feb  8 16:30 memory_monitor_summary.json
[2026-02-08 16:31:16] -rw-------. 1 boincer umatlas    345363 Feb  8 16:30 log.48431113._006241.job.log.tgz.1
[2026-02-08 16:31:16] -rw-------. 1 boincer umatlas      6352 Feb  8 16:30 heartbeat.json
[2026-02-08 16:31:16] -rw-r--r--. 1 boincer umatlas        27 Feb  8 16:31 wrapper_checkpoint.txt
[2026-02-08 16:31:16] -rw-r--r--. 1 boincer umatlas      8192 Feb  8 16:31 boinc_mmap_file
[2026-02-08 16:31:16] -rw-------. 1 boincer umatlas       823 Feb  8 16:31 pilotlog.txt
[2026-02-08 16:31:16] -rw-------. 1 boincer umatlas        95 Feb  8 16:31 pilot_heartbeat.json
[2026-02-08 16:31:16] -rw-------. 1 boincer umatlas    603281 Feb  8 16:31 log.48431113._006241.job.log.1
[2026-02-08 16:31:16] -rw-------. 1 boincer umatlas       357 Feb  8 16:31 output.list
[2026-02-08 16:31:16] -rw-r--r--. 1 boincer umatlas       620 Feb  8 16:31 runtime_log
[2026-02-08 16:31:16] -rw-------. 1 boincer umatlas    962560 Feb  8 16:31 result.tar.gz
[2026-02-08 16:31:16] -rw-r--r--. 1 boincer umatlas      9333 Feb  8 16:31 runtime_log.err
[2026-02-08 16:31:16] -rw-------. 1 boincer umatlas       655 Feb  8 16:31 DAvLDm1M488nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmjAcKDmVCZARn.diag
[2026-02-08 16:31:16] -rw-r--r--. 1 boincer umatlas     21434 Feb  8 16:31 stderr.txt
[2026-02-08 16:31:16] HITS file was successfully produced:
[2026-02-08 16:31:16] -rw-------. 1 boincer umatlas 263499433 Feb  8 16:29 shared/HITS.pool.root.1
[2026-02-08 16:31:16]  *** Contents of shared directory: ***
[2026-02-08 16:31:16] total 898100
[2026-02-08 16:31:16] -rw-r--r--. 2 boincer umatlas 654568863 Feb  8 15:20 ATLAS.root_0
[2026-02-08 16:31:16] -rw-r--r--. 2 boincer umatlas     15845 Feb  8 15:20 start_atlas.sh
[2026-02-08 16:31:16] -rw-r--r--. 2 boincer umatlas    597950 Feb  8 15:20 input.tar.gz
[2026-02-08 16:31:16] -rw-------. 1 boincer umatlas 263499433 Feb  8 16:29 HITS.pool.root.1
[2026-02-08 16:31:16] -rw-------. 1 boincer umatlas    962560 Feb  8 16:31 result.tar.gz
16:31:18 (3918769): run_atlas exited; CPU time 31216.575902
16:31:18 (3918769): called boinc_finish(0)

</stderr_txt>
]]>

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